ID:

dps_2222

 Coordinate:

Unknown_group_738:4635-4694 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dpse\GA29207-cds]; exon [dpse_GLEANR_9769:2]; exon [dpse_GLEANR_9769:1]; CDS [Dpse\GA29207-cds]; intron [Dpse\GA29207-in]

No Repeatable elements found

mature
star
  1. dps_2222  Unknown_group_738:4635-4656 -
  2. dps_2849  XL_group3a:1529865-1529886 -

Sense Strand Reads

##################################################------------------------------------------------------------##################################################
TGTCGACTCAACCCAATTCCGCTGACCATATTCAGCAGACCGTCGATGCGGTAAGTAGCAAAAGTCAGAATTTGAAAGACGTTGCTGCTGCTTTGCACCGTCTTTCACAGAAGGTTGATAAGCTACAACACAACATCCCCAAAAAGCCCAAGGAGAAAAG
*******************************************************.................(((((((((.(((.........))).)))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 SRR902011
testis
 SRR902012
CNS imaginal disc
 M022
male body		 M062
head
.......................................................TAGCAAAAGTCAGAATTTGAAAGACGT.............................................................................. 27 0 1 59.00 59 3 55 0 0 0 1 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGC........................................................................ 24 0 1 40.00 40 5 31 2 0 0 2 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTTGAAA................................................................................... 26 0 1 31.00 31 12 15 1 3 0 0 0 0 0
..............................................TGCGGTAAGTAGCAAAAGTCAGAATT........................................................................................ 26 0 1 30.00 30 10 17 2 0 0 0 1 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAAA............... 27 0 3 28.00 84 66 11 7 0 0 0 0 0 0
.......................................................TAGCAAAAGTCAGAATTTGAAAGACG............................................................................... 26 0 1 27.00 27 3 24 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGATG................................................................................................................ 26 0 2 23.50 47 43 3 0 0 0 0 0 1 0
................TTCCGCTGACCATATTCAGCAGACCG...................................................................................................................... 26 0 2 12.50 25 24 1 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCGTCGA.................................................................................................................. 29 0 2 12.50 25 19 6 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAA................ 26 0 3 11.00 33 27 3 2 0 0 1 0 0 0
............................TATTCAGCAGACCGTCGATGCGG............................................................................................................. 23 0 2 10.50 21 17 2 0 1 1 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAGTAG...................................................................................................... 27 0 2 9.00 18 0 16 0 2 0 0 0 0 0
................TTCCGCTGACCATATTCAGCAGACCGT..................................................................................................................... 27 0 2 9.00 18 18 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAAAG.............. 28 0 3 9.00 27 22 2 3 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCT....................................................................... 25 0 1 8.00 8 2 6 0 0 0 0 0 0 0
.......................................................TAGCAAAAGTCAGAATTTGAAAGAC................................................................................ 25 0 1 8.00 8 0 7 0 0 0 1 0 0 0
.....................................................................................TGCTGCTTTGCACCGTCTTTCACAG.................................................. 25 0 2 8.00 16 16 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGA.................................................................................................................. 24 0 2 8.00 16 14 2 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCTGC..................................................................... 27 0 1 8.00 8 4 3 1 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCGTC.................................................................................................................... 27 0 2 7.50 15 12 0 3 0 0 0 0 0 0
..............................................TGCGGTAAGTAGCAAAAGTCAGAAT......................................................................................... 25 0 1 7.00 7 3 4 0 0 0 0 0 0 0
......................................................................................................TTTCACAGAAGGTTGATAAGCTACAA................................ 26 0 2 6.50 13 13 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAAAGC............. 29 0 3 6.33 19 16 0 2 0 0 0 0 0 1
................................................................TCAGAATTTGAAAGACGTTGCTG......................................................................... 23 0 1 6.00 6 5 1 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCTG...................................................................... 26 0 1 6.00 6 4 2 0 0 0 0 0 0 0
................TTCCGCTGACCATATTCAGCAGACC....................................................................................................................... 25 0 2 5.50 11 6 0 5 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGAT................................................................................................................. 25 0 2 5.50 11 11 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAG......................................................................................................... 24 0 2 5.50 11 5 5 0 0 1 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCG...................................................................................................................... 25 0 2 4.50 9 9 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAA................. 25 0 3 4.33 13 9 3 1 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCA................... 23 0 3 4.00 12 12 0 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCGT..................................................................................................................... 26 0 2 4.00 8 8 0 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCGTCG................................................................................................................... 28 0 2 4.00 8 8 0 0 0 0 0 0 0 0
..............................................TGCGGTAAGTAGCAAAAGTCAGAA.......................................................................................... 24 0 1 4.00 4 0 4 0 0 0 0 0 0 0
...................................................................................................................TGATAAGCTACAACACAACATCCCCA................... 26 0 3 3.67 11 8 3 0 0 0 0 0 0 0
...................................................................................................................TGATAAGCTACAACACAACATCCCCAA.................. 27 0 3 3.33 10 8 2 0 0 0 0 0 0 0
.................................................................CAGAATTTGAAAGACGTTGCTGC........................................................................ 23 0 1 3.00 3 2 1 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTTGAA.................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.......................................................TAGCAAAAGTCAGAATTTGAAAGA................................................................................. 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTTGAAAG.................................................................................. 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0
......................................................................................................TTTCACAGAAGGTTGATAAGCTACAACA.............................. 28 0 2 3.00 6 5 0 1 0 0 0 0 0 0
.................................................................CAGAATTTGAAAGACGTTGCTG......................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATG................................................................................................................ 20 0 2 3.00 6 6 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAA.................. 24 0 3 2.67 8 8 0 0 0 0 0 0 0 0
................TTCCGCTGACCATATTCAGCAGACCGTC.................................................................................................................... 28 0 2 2.50 5 5 0 0 0 0 0 0 0 0
.......................................................................................................................AAGCTACAACACAACATCCCCAAAAA............... 26 0 3 2.33 7 7 0 0 0 0 0 0 0 0
................................................CGGTAAGTAGCAAAAGTCAGAATT........................................................................................ 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................AAAAGTCAGAATTTGAAAGACGT.............................................................................. 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTTGA..................................................................................... 24 0 1 2.00 2 1 0 0 1 0 0 0 0 0
........................................................................................TGCTTTGCACCGTCTTTCACAGAAGGT............................................. 27 0 2 2.00 4 4 0 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTTGAAAA.................................................................................. 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................TTTGCACCGTCTTTCACAGAAGGT............................................. 24 0 2 2.00 4 4 0 0 0 0 0 0 0 0
................TTCCGCTGACCATATTCAGCAGACCGTCG................................................................................................................... 29 0 2 2.00 4 4 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTTTGCACCG............................................................ 28 0 2 2.00 4 4 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGCGGTAA.......................................................................................................... 26 0 2 2.00 4 1 1 0 0 1 0 0 1 0
...................................................TAAGTAGCAAAAGTCAGAATTTG...................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCTGCTT................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCT.......................................................................... 22 0 1 2.00 2 1 0 1 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAGTA....................................................................................................... 26 0 2 2.00 4 2 2 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTTGAAAGA................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAAAAA............. 29 2 3 1.67 5 0 5 0 0 0 0 0 0 0
.......................GACCATATTCAGCAGACCGTCGATG................................................................................................................ 25 0 2 1.50 3 3 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGATGC............................................................................................................... 27 0 2 1.50 3 3 0 0 0 0 0 0 0 0
.........................CCATATTCAGCAGACCGTCGATGCGG............................................................................................................. 26 0 2 1.50 3 2 0 0 1 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCG.............................................................................................................. 19 0 2 1.50 3 2 1 0 0 0 0 0 0 0
TGTCGACTCAACCCAATTCCGCTGACC..................................................................................................................................... 27 0 2 1.50 3 3 0 0 0 0 0 0 0 0
........................................................................................................TCACAGAAGGTTGATAAGCTACAACA.............................. 26 0 2 1.50 3 1 2 0 0 0 0 0 0 0
..............................TTCAGCAGACCGTCGATGCGGTA........................................................................................................... 23 0 2 1.50 3 3 0 0 0 0 0 0 0 0
.......................................................................................................TTCACAGAAGGTTGATAAGCTACAA................................ 25 0 2 1.50 3 2 0 0 0 1 0 0 0 0
.............................ATTCAGCAGACCGTCGATGCGGTAAAG........................................................................................................ 27 2 2 1.50 3 0 3 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGCGGTAAG......................................................................................................... 27 0 2 1.50 3 1 0 0 1 1 0 0 0 0
.............................................................................................TGCACCGTCTTTCACAGAAGGTTG........................................... 24 0 2 1.50 3 3 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGG............................................................................................................. 20 0 2 1.50 3 3 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTT................................................................... 21 0 5 1.40 7 5 1 0 1 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCTTTG................................................................. 24 0 5 1.40 7 7 0 0 0 0 0 0 0 0
.......................................................................................................................AAGCTACAACACAACATCCCCAAAA................ 25 0 3 1.33 4 4 0 0 0 0 0 0 0 0
...................................................................................................................TGATAAGCTACAACACAACATCCC..................... 24 0 4 1.25 5 4 0 0 0 1 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCTTT.................................................................. 23 0 5 1.20 6 6 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGAA................................................................................................................. 25 1 2 1.00 2 2 0 0 0 0 0 0 0 0
.....................................................................................TGCTGCTTTGCACCGTCTTTCACAGAAG............................................... 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...............................................................GTCAGAATTTGAAAGACGTTGCTGC........................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................AAGCTACAACACAACATCCCCAAAAAG.............. 27 0 3 1.00 3 3 0 0 0 0 0 0 0 0
...................................................TAAGAAGCAAAAGTCAGAATTTGAAA................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0
................TTCCGCTGACCATATTCAG............................................................................................................................. 19 0 2 1.00 2 2 0 0 0 0 0 0 0 0
................................................................................................................................CACAACATCCCCAAAAAGCCCAAGGA...... 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
....................................................AAGTAGCAAAAGTCAGAATTTGAAAGA................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................TGCTTTGCACCGTCTTTCACAGAAGGTA............................................ 28 1 2 1.00 2 0 2 0 0 0 0 0 0 0
........................................................................................TGCTTTGCACCGTCTTTCACAG.................................................. 22 0 2 1.00 2 1 0 1 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTTTGCACC............................................................. 27 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..................................................................AGAATTTGAAAGACGTTGCTGC........................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAGAATTT....................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................AGTCAGAATTTGAAAGACGTTGCTGC........................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACC....................................................................................................................... 24 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.......................................................TAGCAAAAGTCAGAATTTGAAAGACGTAA............................................................................ 29 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................GACGTTGCTGCTGCTTTGCACCGTCTT........................................................ 27 0 2 1.00 2 2 0 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGC........................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGCGGTAAA......................................................................................................... 27 1 2 1.00 2 2 0 0 0 0 0 0 0 0
.................................................................................TTGCTGCTGCTTTGCACCGTCT......................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.......................................................TAGCAAAAGGCAGAATTTGAAAGACGT.............................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAGT........................................................................................................ 25 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.................................................................CAGAATTTGAAAGACGTTGCTGCT....................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................GATGCGGTAAGTAGCAAAAGTCAGAATT........................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................TAATTAGCAAAAGTCAGAATTTGAA.................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................ATATTCAGCAGACCGTCGATGCGG............................................................................................................. 24 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..............................................TGCGGTAAGTAGCAAAAGTCAGAC.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
........................ACCATATTCAGCAGACCGTCGATGCGG............................................................................................................. 27 0 2 1.00 2 1 0 1 0 0 0 0 0 0
..................................................................................TGCTGCTGCTTTGCACCGTCTTTCAC.................................................... 26 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.......................................................................................CTGCTTTGCACCGTCTTTCACAGAAG............................................... 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCTGGT.................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCGTCGAT................................................................................................................. 30 0 2 1.00 2 0 2 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGAT................................................................................................................. 19 0 2 1.00 2 2 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCC.................... 22 0 3 1.00 3 1 0 2 0 0 0 0 0 0
..................................................................................TGCTGCTGCTTTGCACCGTCTTTCACAG.................................................. 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGATGCG.............................................................................................................. 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................................TAAGTAGCAAAAGTCAAAA.......................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCTC...................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..................CCGCTGACCATATTCAGCAGACCGTCGA.................................................................................................................. 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................TGATAAGCTACAACACAACATCCCC.................... 25 0 3 1.00 3 1 0 2 0 0 0 0 0 0
...............................................GCGGTAAGTAGCAAAAGTCAGAATT........................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CAAGCTACAACACAACATCCCCAA.................. 24 1 3 1.00 3 0 3 0 0 0 0 0 0 0
.......................................................TAGCAAAAGTCAGAATTTGAAAGACGTA............................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGTTGCTGCTGCT.................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................TGCTTTGCACCGTCTTTCACAGAAGG.............................................. 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
....................................................AAGTAGCAAAAGTCAGAATTTGAAA................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................TCAGAATTTGAAAGACGATGC........................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................GACCATATTCAGCAGACCGTCGAT................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTTTGCAC.............................................................. 26 0 5 0.80 4 3 0 1 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGC..................................................................... 19 0 5 0.80 4 4 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCC..................... 21 0 4 0.75 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................TACAACACAACATCCCCAAAAAGCC............ 25 0 3 0.67 2 1 0 1 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAAAA.............. 28 1 3 0.67 2 1 0 1 0 0 0 0 0 0
....................................................................................................................GATAAGCTACAACACAACATCCCCA................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGC..................................................................... 20 0 5 0.60 3 2 0 0 0 1 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCT.................................................................... 20 0 5 0.60 3 2 0 0 1 0 0 0 0 0
......................................................................TTTGAAAGACGTTGCTGCTG...................................................................... 20 0 5 0.60 3 3 0 0 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCTT................................................................... 22 0 5 0.60 3 3 0 0 0 0 0 0 0 0
TGTCGACTCAACCCAATTCCGCTGAC...................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................ACATCCCCAAAAAGCCCAAGGAGAAA.. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................................TCTTTCACAGAAGGTTGATAAGCTA................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................TGCTGCTGCTTTGCACCGTCTTTCA..................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................TTGCTGCTGCTTTGCACCGT........................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......TCAACCCAATTCCGCTGACCATAT................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................TCCCGCTGACCATATTCAGCAGACC....................................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.....................................................................................CGCTGCTTTGCACCGTCTTTCACAG.................................................. 25 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................ATTCAGCAGACCGTCGATGCGG............................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................TGATAAGCTACAACACAACATCC...................... 23 0 4 0.50 2 1 0 1 0 0 0 0 0 0
..............................TTCAGCAGACCGTCGATGCGGTAAGA........................................................................................................ 26 1 2 0.50 1 0 1 0 0 0 0 0 0 0
......................TCACCATATTCAGCAGACCGTCGATG................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................................TGCTGCTTTGCACCGTCTTTCAC.................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................TTCAGCAGACCGTCGATGC............................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................AACATCCCCAAAAAGCCCAAGGAGAA... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGGCGATGCGGTAAG......................................................................................................... 24 1 2 0.50 1 0 0 0 0 1 0 0 0 0
..TCGACTCAACCCAATTCCGCTGACCA.................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCG................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGC............................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................................TGCTGCTTTGCACCGTCTTTCACAA.................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGACCGTCT................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCTTTGCACCG............................................................ 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................TTGCTGCTGCTTTGCACCGTCTTTCACAG.................................................. 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................................................TGCACCGTCTTTCACAGAAGGTTGA.......................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGATGCA.............................................................................................................. 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................................TGCACCGTCTTTCACAGAAGGTTGAAA........................................ 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................TTACCATATTCAGCAGACCGTCGATGC............................................................................................................... 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................AACATCCCCAAAAAGCCCAAGGAGAAA.. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................TTGACCATATTCAGCAGACCGTCGAT................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...................CGCTGACCATATTCAGCAGACCG...................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGCGGTA........................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................TTGCACCGTCTTTCACAGAAGG.............................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................ACCATATTCAGCAGACCGTCGATG................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTTGCACCGTCTTTCACAGAAGGTTGA.......................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................................TGCTGCTTTGCACCGTCTTTCACAGA................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................TTCCGCTGACCATATTCAGCACACCGT..................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................TTCACAGAAGGTTGATAAGCTACAACA.............................. 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................ACAACATCCCCAAAAAGCCCAAGGA...... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................TGCTGCTGCTTTGCACCGTCTTTC...................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................TTGCTGCTGCTTTGCACCGTCTTTCA..................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................TTTCACAGAAGGTTGATAAGCTACA................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
TGTCGACTCAACCCAATTCCGCTGACCA.................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................ACCATATTCAGCAGACCGTCGAT................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................CGCTGACCATATTCAGCAGACCGTCG................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGCGGTAAGA........................................................................................................ 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............................TATTCAGCAGACCGTCGATGCG.............................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAGA........................................................................................................ 25 1 2 0.50 1 0 0 0 0 1 0 0 0 0
................................................................................GTTGCTGCTGCTTTGCACC............................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCTCCAAAAA............... 27 1 4 0.50 2 0 2 0 0 0 0 0 0 0
.......................GACCATATTCAGCAGACCGTCGATGA............................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................TGACCATATTCAGCAGACCGTCGAGG................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................TGTCACAGAAGGTTGATAAGCTACAAC............................... 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0
...CGACTCAACCCAATTCCGCTGACCA.................................................................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................................................................................TTTCACAGAAGGTTGAGAAGCTACAA................................ 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0
......................CGACCATATTCAGCAGACCGT..................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAA.......................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........CAACCCAATTCCGCTGACCATAT................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........CAACCCAATTCCGCTGACCATATTC............................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................CCCCTGACCATATTCAGCAGACCGT..................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............................TATCCAGCAGACCGTCGATG................................................................................................................ 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................ACACAACATCCCCAAAAAGCCCAAGGA...... 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................TCCGCTGACCATATTCAGCAGGCCGTCGA.................................................................................................................. 29 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................GCTTTGCACCGTCTTTCACAGAAGGT............................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................CCGTCGATGCGGTAAGTAGCAAAAG................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................TTCACAGAAGGTTGATAAGCTACAACAC............................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................ATCAGCAGACCGTCGATG................................................................................................................ 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................CAACATCCCCAAAAAGCCCAAGGAGA.... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................................................................TCACAGAAGGTTGATAAGCTACAA................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAGCAG...................................................................................................... 27 1 2 0.50 1 0 1 0 0 0 0 0 0 0
........................................................................................TGCTTTGCACCGTCTTTCACAGAAG............................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCTTTGCACC............................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................TTCTGCTGACCATATTCAGCAGACC....................................................................................................................... 25 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................................TGCACCGTCTTTCACAGAAGG.............................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................TTCCGCTGACCATATTCAGCAGA......................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................................................TGCTTTGCATCGTCTTTCACAGAAGG.............................................. 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................CGGCTTTGCACCGTCTTTCACAGAA................................................ 25 1 2 0.50 1 0 0 1 0 0 0 0 0 0
..................................................................................TGCTGCTGCTTTGCACCGTCA......................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................GCAGACCGTCGATGCGGTAAGTA....................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAAA........................................................................................................ 25 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................TTCAGCAGACCGTCGATGCGGTAAGTT....................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................TGCTGCTGCTTTGCACCGTC.......................................................... 20 0 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................................................................TCTTTCACAGAAGGTTGATAAGCT.................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGACCGTCGATGCGGTAAGTT....................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCTTTGCAC.............................................................. 27 0 5 0.40 2 2 0 0 0 0 0 0 0 0
TGTCGACTCAACCCAATTCCGCT......................................................................................................................................... 23 0 5 0.40 2 2 0 0 0 0 0 0 0 0
TGTCGACTCAACCCAATTCCGCTGA....................................................................................................................................... 25 0 5 0.40 2 1 1 0 0 0 0 0 0 0
......................................................................TTTGAAAGACGTTGCTGCTGCTT................................................................... 23 0 5 0.40 2 2 0 0 0 0 0 0 0 0
........................................................................................................................AGCTACAACACAACATCCCCAAAAA............... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................CACAGAAGGTTGATAAGCTACAACA.............................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................TTGATAAGCTACAACACAACATCCCCAA.................. 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TGAGCTACAACACAACATCCCCAAAAAGC............. 29 1 3 0.33 1 0 0 1 0 0 0 0 0 0
...................................................................................................................TGATAAGCTACAACACAACATCCCCAAA................. 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................................AGCTACAACACAACATCCCCAAAAAGCC............ 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................TACAACACAACATCCCCAAAAAGCCC........... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................GCTAAGCTACAACACAACATCCCCAAAAA............... 29 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................GATAAGCTACAACACAACATCCCCACA................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................CTACAACACAACATCCCCAAAAAGCC............ 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCAAAAAGA............. 29 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................................................GGCTAAGCTACAACACAACATCCCCA................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCCGAAAAG.............. 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................................CACAACATCCCCAAAAAGCCCAAGG....... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................TACAACACAACATCCCCAAAAAGCCCAAG........ 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TGAGCTACAACACAACATCCCCAAAA................ 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0
............................................................................................................AGAAGGTTGATAAGCTACAACACAACA......................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................CAACACAACATCCCCAAAAAGCC............ 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................TCAGCAGATCGTCGATGCGGTTAG......................................................................................................... 24 2 3 0.33 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................GCTACAACACAACATCCCCAAAAAGC............. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................AACAACACAACATCCCCAAAAAGCC............ 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................CTACAACACAACATCCCCAAAA................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................................ACAACACAACATCCCCAAAAAGCC............ 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................CAACACAACATCCCCAAAAAG.............. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCC...................... 20 0 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCAAAAAAGC............. 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................................................................................TAAGCTACAACACAACATCCCAAAAA................ 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGT..................................................................... 19 1 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................AATTTGAAAGACGTTGCTGCT....................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTTTGCA............................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................TTTGAAAGACGTTGCTGCTACTT................................................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...................................................................GAATTTGAAAGACGTTGCTGC........................................................................ 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..............................................................................ACGCTGCTCCTGCTTTGCAC.............................................................. 20 2 5 0.20 1 1 0 0 0 0 0 0 0 0
..............................................................................................................AAGGTTGATAAGCTACAACACAACA......................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTTC.................................................................. 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTTT.................................................................. 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................TTGAAAGACTTTGCTGCTGCTT................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...................................................................GAATTTGAAAGACGTTGCTGCTG...................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................................................AAAGACGTTGCTGCTGCT.................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCTC................................................................... 21 1 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................TTGTAAGACGTTGCTGCTGCTT................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGCT.................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTGT..................................................................... 20 1 5 0.20 1 0 0 0 1 0 0 0 0 0
.........................................................................GAAAGACGTTGCTGCTGCTTTGCAC.............................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGCAA................................................................... 21 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................TTCAAAGCAGTTGCTGCTGCTTTGCAC.............................................................. 27 3 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................TTGAAAGACGTTGCTGCTG...................................................................... 19 0 5 0.20 1 0 1 0 0 0 0 0 0 0
......................................................................TTTGAAAGACGTTGCTGCTGC..................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..................................................................TCAGTTTGAAAGACGTTGCTGC........................................................................ 22 3 6 0.17 1 0 1 0 0 0 0 0 0 0
........................................................................TGAAAGACGTTGCTGCTGA..................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................AGACGGTCGATGCTGTAAGG........................................................................................................ 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0
........................................CGTCGATGCGGGGAGTAG...................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 1 0 0
........................................................ATAAAAAGTCAGAATTTGA..................................................................................... 19 2 11 0.09 1 1 0 0 0 0 0 0 0 0
............................CAATCTGCAGACCGTCGAT................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

ACAGCTGAGTTGGGTTAAGGCGACTGGTATAAGTCGTCTGGCAGCTACGCCATTCATCGTTTTCAGTCTTAAACTTTCTGCAACGACGACGAAACGTGGCAGAAAGTGTCTTCCAACTATTCGATGTTGTGTTGTAGGGGTTTTTCGGGTTCCTCTTTTC
**************************************************.................(((((((((.(((.........))).)))))))))...******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 M059
embryo
 M062
head
 V112
male body		 GSM343916
embryo
........................................................................................................AGTGTCTTCCAACTATTCGATGTT................................ 24 0 2 19.00 38 18 15 5 0 0 0 0
.......................................GGCAGCTACGCCATTCATCGTT................................................................................................... 22 0 2 18.50 37 37 0 0 0 0 0 0
.........................................................................................................GTGTCTTCCAACTATTCGATGTT................................ 23 0 3 11.33 34 31 3 0 0 0 0 0
..........................................................................................................TGTCTTCCAACTATTCGATGTT................................ 22 0 3 9.00 27 19 8 0 0 0 0 0
.....................................CTGGCAGCTACGCCATTCATCGTT................................................................................................... 24 0 2 6.00 12 10 0 0 1 1 0 0
.......................................GGCAGCTACGCCATTCATCGT.................................................................................................... 21 0 2 3.00 6 6 0 0 0 0 0 0
.......................................................................................................AAGTGTCTTCCAACTATTCGATGTT................................ 25 0 2 3.00 6 4 0 1 1 0 0 0
......................................TGGCAGCTACGCCATTCATCGTT................................................................................................... 23 0 2 2.50 5 5 0 0 0 0 0 0
..........TGGGTTAAGGCGACTGGTATAAGTCGT........................................................................................................................... 27 0 2 2.50 5 2 3 0 0 0 0 0
......................................................................................................AAAGTGTCTTCCAACTATTCGATGTT................................ 26 0 2 2.00 4 1 2 1 0 0 0 0
........................................GCAGCTACGCCATTCATCGTT................................................................................................... 21 0 5 1.80 9 9 0 0 0 0 0 0
...........................................................................................................GTCTTCCAACTATTCGATGTT................................ 21 0 3 1.67 5 5 0 0 0 0 0 0
................................................................................................................................GTGTTGTAGGGGTTTTT............... 17 0 3 1.67 5 0 5 0 0 0 0 0
........GTTGGGTTAAGGCGACTGGTAT.................................................................................................................................. 22 0 2 1.50 3 1 0 2 0 0 0 0
.........TTGGGTTAAGGCGACTGGTATAA................................................................................................................................ 23 0 2 1.50 3 0 3 0 0 0 0 0
......................................TGGCAGCTACGCCATTCATCGT.................................................................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0
........................................................................................................AGTGTCTTCCAACTATTCGATGT................................. 23 0 2 1.00 2 2 0 0 0 0 0 0
..............................................................TCAGTCTTAAACTTTCTGCAACGAC......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
............GGTTAAGGCGACTGGTATA................................................................................................................................. 19 0 2 1.00 2 0 0 2 0 0 0 0
..........................................AGCTACGCCATTCATCGTTTTCAGT............................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................GTGTCTTCCAACTATTCGATGT................................. 22 0 3 1.00 3 3 0 0 0 0 0 0
.............................................................TTCAGTCTTAAACTTTCTGCAACGA.......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................TGTCTTCCAACTATTCGATGT................................. 21 0 3 0.67 2 2 0 0 0 0 0 0
...............................................................................GCAACGACGACGAAACGTGGCAGAA........................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
.....................................CTGGCAGCTACGCCATTCATCGT.................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................AATGTCTTCCAACTATTCGATGTT................................ 24 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................................GTAGGGGTTTTTCGGGTTCCTC..... 22 0 2 0.50 1 1 0 0 0 0 0 0
............................ATAAGTCGTCTGGCAGCTACGCCAT........................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
.......AGTTGGGTTAAGGCGACTGGTAT.................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0
....CTGAGTTGGGTTAAGGCGACTGG..................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
..........TGGGTTAAGGCGACTGGTATAAGT.............................................................................................................................. 24 0 2 0.50 1 0 0 0 0 0 1 0
.....................................................................................................GAAAGTGTCTTCCAACTATTCGATGTT................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
......GAGTTGGGTTAAGGCGACTGGTAT.................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................CGAAACGTGGCAGAAAGTGTCTT................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0
.......................................GGCAGCTACGCCATTCATCTTT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0
...................................................................................CGACGACGAAACGTGGCAGAA........................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
......................................TGGCAGCTACGCCATTCATCGTTT.................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................GACGAAACGTGGCAGAAAGTGTCTT................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
..AGCTGAGTTGGGTTAAGGCGACTGGT.................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................................................GTTGTAGGGGTTTTTCGGGTTCCT...... 24 0 2 0.50 1 1 0 0 0 0 0 0
.....CATGTTGGGTTAAGGCGACTGGT.................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................GGGGTTTTTCGGGTTCCTCTTTT. 23 0 2 0.50 1 0 1 0 0 0 0 0
..................................CGTCTGGCAGCTACGCCATTCATCGTT................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
.........................................CAGCTACGCCATTCATCGTT................................................................................................... 20 0 5 0.40 2 2 0 0 0 0 0 0
................................................................................................................................GTGTTGTAGGGGTTTTTC.............. 18 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................GTTGGGGAGTTTCGGGTTCCT...... 21 3 3 0.33 1 1 0 0 0 0 0 0
.......................................GGCAGCTACGCCATTCATCGTTC.................................................................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................................GTCTTCCAACTATTCGATGT................................. 20 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................TATTCGATGTTGTGTTGTAGGGGT................... 24 0 3 0.33 1 0 1 0 0 0 0 0
............................................................................................................TCTTCCAACTATTCGATGTT................................ 20 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................CGTCTTCCAACTATTCGATGTT................................ 22 1 4 0.25 1 0 0 0 1 0 0 0
......................................................................................................................ATTCGATGTTGTGTTGTAGG...................... 20 0 4 0.25 1 0 1 0 0 0 0 0
...............................................................................................................................TGTCTTGTAGGGTTCTTTCGGGTT......... 24 3 5 0.20 1 0 0 0 0 0 0 1
.....................................................................TAAACTTTCTGCAACGACGACGAAACGT............................................................... 28 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................AACTTTCTGCAACGACGACGAAACGT............................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
.....................................................................TAAACTTTCTGCAACGACGACGAAAC................................................................. 26 0 5 0.20 1 1 0 0 0 0 0 0
...........................................................................................................AACTTCCAACTATTCGATGTT................................ 21 2 5 0.20 1 1 0 0 0 0 0 0
........................................................................ACTTTCTGCAACGACGACGAAAC................................................................. 23 0 5 0.20 1 1 0 0 0 0 0 0
....................................................................TTAAACTTTCTGCAACGACGACGAAA.................................................................. 26 0 5 0.20 1 1 0 0 0 0 0 0
........................................ACAGCTACGCCATTCATCGTT................................................................................................... 21 1 5 0.20 1 1 0 0 0 0 0 0
........................................GCAGCTACGCCATTCATCTT.................................................................................................... 20 1 5 0.20 1 1 0 0 0 0 0 0
....................CGACTGGTAAAAGTCGGCTTG....................................................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0
.........................................................................................................................................GGGAGTTTCGGGTTCCTC..... 18 2 9 0.11 1 1 0 0 0 0 0 0
..................................................................................................................ATCTATTCGATGTTGTGGT........................... 19 2 13 0.08 1 0 0 0 0 0 0 1
........GTTGGATTTAGGCGACTG...................................................................................................................................... 18 2 14 0.07 1 1 0 0 0 0 0 0
.........................GGTCTATGTCGTCTAGCAGC................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_738:4585-4744 - dps_2222 TGTCGACTCAACCCAATTCCGCTGACCATATTCAGCAGACCGTCGATGCGGTAAGTA------GC-AAAAG---TCAGAATT-----------TGAAAGACGTTGCTGCTGCTTTGCACCGTCTTTCACAGAAGGTTGATAAGCTACAACACAACATC-------CCCAAAAAGCCCAAGGAGAAAAG
droPer2 scaffold_56:10257-10409 - dpe_1842 TGTCGACTCAACCCAATTCCGCTGACCATATTCAGCAGAGCGTCGATGCGGTAAGTA------GC-AAAAG---TCCGAATT-----------TGAAAGACGTTGCTGCTGCTTTGCACCGTCTTTCACAGAAGGTTGATAAGCTACAACACAACATC-------CCCAAAAAGCCCAAGG-------
droVir3 scaffold_12728:745732-745864 + TGTCGACACAAACTGCAACTGCTGAGCAAAAACAGCAGAATATAGAAGAGGTCAGTA------AC-AATAG---CCCCAGCT-----------TAACTGATGTTGCGGCCGCCTTGCACGCGCTTTCCCAGTAAGTCGATAAGCTGCAGAACGA----------------------------------
droFic1 scf7180000453788:56909-57035 + CTTCGACTGCTGCTGATTCAT---------------------------------------CCA-TTT---GCGCAGCTTCTACCGAAGATCCTTGGAAAAAGTCAACAAGCAGCTGCGTTCGCTTTCACAAAAGTTTGATGATTTACAAAAGGATGTCAAACGTCTCCAA------------------
droEle1 scf7180000488816:7294-7409 - TCTCTGCA------------GATGA-CGTAGCCGGAACCGCTTCGGTGAATGCAG-----TTG-CTC---GTCCGGAATCTA-----------TCAAGGACATCGCAGACTCTCTGCGTGCGCTGACAAAAAAGGTTGATACGATGCAA---------------------------------------
droTak1 scf7180000413162:8752-8900 - TTTCGATTGCATCTGAC---------AGTGCTCCGCCTATGGACAACTCTGTAAACGCCCTCGAG-CAGGG---TGGAACCC-----------TCAAAGATGTGGCTAATTCTATACGTTCCTTGTCACAACAAGTAAATTTTTTACAAGACGAAGTTAAG-----------CGCCTAAAG----AAA
droYak3 chr2h:849726-849743 + T--CGGCTCGTCCCCATCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4732:163005-163005 + T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGTCGACTCAACCCAATTCCGCTGACCATATTCAGCAGACCGTCGATGCGGTAAGTA------GC-AAAAG---TCAGAATT-----------TGAAAGACGTTGCTGCTGCTTTGCACCGTCTTTCACAGAAGGTTGATAAGCTACAACACAACATC-------CCCAAAAAGCCCAAGGAGAAAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................TA------GC-AAAAG---TCAGAATT-----------TGAAAGACGT.....................................................................................27159.005903000005510
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGC...............................................................................24140.004005200003120
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TGAAA..........................................................................................26131.0031012100031500
..............................................TGCGGTAAGTA------GC-AAAAG---TCAGAATT-----------...............................................................................................26130.0030010200001701
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAA...............27328.0084066700001100
.......................................................TA------GC-AAAAG---TCAGAATT-----------TGAAAGACG......................................................................................26127.002703000002400
......................TGACCATATTCAGCAGACCGTCGATG............................................................................................................................................26223.504714300000300
................TTCCGCTGACCATATTCAGCAGACCG..................................................................................................................................................26212.502502400000100
.................TCCGCTGACCATATTCAGCAGACCGTCGA..............................................................................................................................................29212.502501900000600
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAA................26311.003302720000310
............................TATTCAGCAGACCGTCGATGCGG.........................................................................................................................................23210.502101700101200
...............................TCAGCAGACCGTCGATGCGGTAAGTA------G............................................................................................................................2729.001800000021600
................TTCCGCTGACCATATTCAGCAGACCGT.................................................................................................................................................2729.001801800000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAG..............2839.002702230000200
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGCT..............................................................................2518.0080200000600
.......................................................TA------GC-AAAAG---TCAGAATT-----------TGAAAGAC.......................................................................................2518.0080000000710
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACAG.........................................................2528.001601600000000
......................TGACCATATTCAGCAGACCGTCGA..............................................................................................................................................2428.001601400000200
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGCTGC............................................................................2718.0080410000300
.................TCCGCTGACCATATTCAGCAGACCGTC................................................................................................................................................2727.501501230000000
..............................................TGCGGTAAGTA------GC-AAAAG---TCAGAAT...........................................................................................................2517.0070300000400
...........................................................................................................................TTTCACAGAAGGTTGATAAGCTACAA.......................................2626.501301300000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAGC.............2936.331901621000000
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTG................................................................................2316.0060500000100
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGCTG.............................................................................2616.0060400000200
................TTCCGCTGACCATATTCAGCAGACC...................................................................................................................................................2525.50110650000000
......................TGACCATATTCAGCAGACCGTCGAT.............................................................................................................................................2525.501101100000000
...............................TCAGCAGACCGTCGATGCGGTAAG.....................................................................................................................................2425.50110500100500
.................TCCGCTGACCATATTCAGCAGACCG..................................................................................................................................................2524.5090900000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAA.................2534.33130910000300
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCA...................2334.001201200000000
.................TCCGCTGACCATATTCAGCAGACCGT.................................................................................................................................................2624.0080800000000
.................TCCGCTGACCATATTCAGCAGACCGTCG...............................................................................................................................................2824.0080800000000
..............................................TGCGGTAAGTA------GC-AAAAG---TCAGAA............................................................................................................2414.0040000000400
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCCA...................2633.67110800000300
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCCAA..................2733.33100800000200
...........................................................................CAGAATT-----------TGAAAGACGTTGCTGC...............................................................................2313.0030200000100
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TGAA...........................................................................................2513.0030300000000
.......................................................TA------GC-AAAAG---TCAGAATT-----------TGAAAGA........................................................................................2413.0030000000300
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TGAAAG.........................................................................................2713.0030200000100
...........................................................................................................................TTTCACAGAAGGTTGATAAGCTACAACA.....................................2823.0060510000000
...........................................................................CAGAATT-----------TGAAAGACGTTGCTG................................................................................2213.0030300000000
............................TATTCAGCAGACCGTCGATG............................................................................................................................................2023.0060600000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAA..................2432.6780800000000
................TTCCGCTGACCATATTCAGCAGACCGTC................................................................................................................................................2822.5050500000000
............................................................................................................................................AAGCTACAACACAACATC-------CCCAAAAA...............2632.3370700000000
................................................CGGTAAGTA------GC-AAAAG---TCAGAATT-----------...............................................................................................2412.0020000000200
..................................................................AAAAG---TCAGAATT-----------TGAAAGACGT.....................................................................................2312.0020000000200
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TGA............................................................................................2412.0020100001000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGAAGGT....................................................2722.0040400000000
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TGAAAA.........................................................................................2712.0020200000000
................................................................................................................TTTGCACCGTCTTTCACAGAAGGT....................................................2422.0040400000000
................TTCCGCTGACCATATTCAGCAGACCGTCG...............................................................................................................................................2922.0040400000000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCACCG...................................................................2822.0040400000000
............................TATTCAGCAGACCGTCGATGCGGTAA......................................................................................................................................2622.0041100100100
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TG.............................................................................................2312.0020200000000
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGCTGCTT..........................................................................2912.0020200000000
..........................................................................TCAGAATT-----------TGAAAGACGTTGCT.................................................................................2212.0020110000000
...............................TCAGCAGACCGTCGATGCGGTAAGTA------.............................................................................................................................2622.0040200000200
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------TGAAAGA........................................................................................2812.0020200000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAAA.............2931.6750000000500
.......................GACCATATTCAGCAGACCGTCGATG............................................................................................................................................2521.5030300000000
......................TGACCATATTCAGCAGACCGTCGATGC...........................................................................................................................................2721.5030300000000
.........................CCATATTCAGCAGACCGTCGATGCGG.........................................................................................................................................2621.5030200001000
...............................TCAGCAGACCGTCGATGCG..........................................................................................................................................1921.5030200000100
TGTCGACTCAACCCAATTCCGCTGACC.................................................................................................................................................................2721.5030300000000
.............................................................................................................................TCACAGAAGGTTGATAAGCTACAACA.....................................2621.5030100000200
..............................TTCAGCAGACCGTCGATGCGGTA.......................................................................................................................................2321.5030300000000
............................................................................................................................TTCACAGAAGGTTGATAAGCTACAA.......................................2521.5030200100000
.............................ATTCAGCAGACCGTCGATGCGGTAAAG....................................................................................................................................2721.5030000000300
............................TATTCAGCAGACCGTCGATGCGGTAAG.....................................................................................................................................2721.5030100101000
..................................................................................................................TGCACCGTCTTTCACAGAAGGTTG..................................................2421.5030300000000
...............................TCAGCAGACCGTCGATGCGG.........................................................................................................................................2021.5030300000000
.............................................................................................TGAAAGACGTTGCTGCTGCTT..........................................................................2151.4070500001100
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTTG........................................................................2451.4070700000000
............................................................................................................................................AAGCTACAACACAACATC-------CCCAAAA................2531.3340400000000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CC.....................2441.2550400100000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTT.........................................................................2351.2060600000000
......................TGACCATATTCAGCAGACCGTCGAA.............................................................................................................................................2521.0020200000000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACAGAAG......................................................2821.0020200000000
......................................................................G---TCAGAATT-----------TGAAAGACGTTGCTGC...............................................................................2511.0010100000000
............................................................................................................................................AAGCTACAACACAACATC-------CCCAAAAAG..............2731.0030300000000
................TTCCGCTGACCATATTCAG.........................................................................................................................................................1921.0020200000000
.....................................................................................................................................................CACAACATC-------CCCAAAAAGCCCAAGGA......2621.0020200000000
....................................................AAGTA------GC-AAAAG---TCAGAATT-----------TGAAAGA........................................................................................2711.0010100000000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGAAGGTA...................................................2821.0020000000200
.............................................................................................................TGCTTTGCACCGTCTTTCACAG.........................................................2221.0020110000000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCACC....................................................................2721.0020200000000
............................................................................AGAATT-----------TGAAAGACGTTGCTGC...............................................................................2211.0010100000000
...................................................TAAGTA------GC-AAAAG---TCAGAATT-----------T..............................................................................................2211.0010100000000
.....................................................................AG---TCAGAATT-----------TGAAAGACGTTGCTGC...............................................................................2611.0010100000000
.................TCCGCTGACCATATTCAGCAGACC...................................................................................................................................................2421.0020110000000
.......................................................TA------GC-AAAAG---TCAGAATT-----------TGAAAGACGTAA...................................................................................2911.0010000000100
..................................................................................................GACGTTGCTGCTGCTTTGCACCGTCTT...............................................................2721.0020200000000
..........................................................................TCAGAATT-----------TGAAAGACGTTGC..................................................................................2111.0010100000000
............................TATTCAGCAGACCGTCGATGCGGTAAA.....................................................................................................................................2721.0020200000000
......................................................................................................TTGCTGCTGCTTTGCACCGTCT................................................................2221.0020200000000
...............................TCAGCAGACCGTCGATGCGGTAAGT....................................................................................................................................2521.0020200000000
...........................................................................CAGAATT-----------TGAAAGACGTTGCTGCT..............................................................................2411.0010100000000
............................................GATGCGGTAAGTA------GC-AAAAG---TCAGAATT-----------...............................................................................................2811.0010100000000
...........................ATATTCAGCAGACCGTCGATGCGG.........................................................................................................................................2421.0020200000000
..............................................TGCGGTAAGTA------GC-AAAAG---TCAGAC............................................................................................................2411.0010100000000
........................ACCATATTCAGCAGACCGTCGATGCGG.........................................................................................................................................2721.0020110000000
.......................................................................................................TGCTGCTGCTTTGCACCGTCTTTCAC...........................................................2621.0020110000000
............................................................................................................CTGCTTTGCACCGTCTTTCACAGAAG......................................................2621.0020200000000
.................TCCGCTGACCATATTCAGCAGACCGTCGAT.............................................................................................................................................3021.0020000000200
............................TATTCAGCAGACCGTCGAT.............................................................................................................................................1921.0020200000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCC....................2231.0030120000000
.......................................................................................................TGCTGCTGCTTTGCACCGTCTTTCACAG.........................................................2821.0020200000000
......................TGACCATATTCAGCAGACCGTCGATGCG..........................................................................................................................................2821.0020200000000
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGCTC.............................................................................2611.0010010000000
..................CCGCTGACCATATTCAGCAGACCGTCGA..............................................................................................................................................2821.0020200000000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCC....................2531.0030120000000
...............................................GCGGTAAGTA------GC-AAAAG---TCAGAATT-----------...............................................................................................2511.0010100000000
.......................................................TA------GC-AAAAG---TCAGAATT-----------TGAAAGACGTA....................................................................................2811.0010000000100
..........................................................................TCAGAATT-----------TGAAAGACGTTGCTGCTGCT...........................................................................2811.0010100000000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGAAGG.....................................................2621.0020200000000
....................................................AAGTA------GC-AAAAG---TCAGAATT-----------TGAAA..........................................................................................2511.0010100000000
.......................GACCATATTCAGCAGACCGTCGAT.............................................................................................................................................2421.0020200000000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCAC.....................................................................2650.8040310000000
.............................................................................................TGAAAGACGTTGCTGCTGC............................................................................1950.8040400000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CC.....................2140.7530300000000
................................................................................................................................................TACAACACAACATC-------CCCAAAAAGCC............2530.6720110000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAA..............2830.6720110000000
.........................................................................................................................................GATAAGCTACAACACAACATC-------CCCA...................2530.6720200000000
.................................................................................T-----------TGAAAGACGTTGCTGCTGC............................................................................2050.6030200100000
.............................................................................................TGAAAGACGTTGCTGCTGCT...........................................................................2050.6030200001000
................................................................................TT-----------TGAAAGACGTTGCTGCTG.............................................................................2050.6030300000000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTT..........................................................................2250.6030300000000
TGTCGACTCAACCCAATTCCGCTGAC..................................................................................................................................................................2620.5010100000000
.........................................................................................................................................................ACATC-------CCCAAAAAGCCCAAGGAGAAA..2620.5010100000000
.........................................................................................................................TCTTTCACAGAAGGTTGATAAGCTA..........................................2520.5010100000000
.......................................................................................................TGCTGCTGCTTTGCACCGTCTTTCA............................................................2520.5010100000000
......................................................................................................TTGCTGCTGCTTTGCACCGT..................................................................2020.5010100000000
.......TCAACCCAATTCCGCTGACCATAT.............................................................................................................................................................2420.5010100000000
.............................ATTCAGCAGACCGTCGATGCGG.........................................................................................................................................2220.5010100000000
........................................................................................................................................TGATAAGCTACAACACAACATC-------C......................2340.5020110000000
..............................TTCAGCAGACCGTCGATGCGGTAAGA....................................................................................................................................2620.5010000000100
..........................................................................................................TGCTGCTTTGCACCGTCTTTCAC...........................................................2320.5010100000000
..............................TTCAGCAGACCGTCGATGC...........................................................................................................................................1920.5010100000000
........................................................................................................................................................AACATC-------CCCAAAAAGCCCAAGGAGAA...2620.5010100000000
..TCGACTCAACCCAATTCCGCTGACCA................................................................................................................................................................2620.5010100000000
......................TGACCATATTCAGCAGACCGTCG...............................................................................................................................................2320.5010100000000
............................TATTCAGCAGACCGTCGATGC...........................................................................................................................................2120.5010100000000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACAA.........................................................2520.5010100000000
.................TCCGCTGACCATATTCAGCAGACCGTCT...............................................................................................................................................2820.5010100000000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTTGCACCG...................................................................2920.5010100000000
......................................................................................................TTGCTGCTGCTTTGCACCGTCTTTCACAG.........................................................2920.5010100000000
..................................................................................................................TGCACCGTCTTTCACAGAAGGTTGA.................................................2520.5010100000000
......................TGACCATATTCAGCAGACCGTCGATGCA..........................................................................................................................................2820.5010010000000
........................................................................................................................................................AACATC-------CCCAAAAAGCCCAAGGAGAAA..2720.5010100000000
...................CGCTGACCATATTCAGCAGACCG..................................................................................................................................................2320.5010100000000
............................TATTCAGCAGACCGTCGATGCGGTA.......................................................................................................................................2520.5010100000000
.................................................................................................................TTGCACCGTCTTTCACAGAAGG.....................................................2220.5010100000000
........................ACCATATTCAGCAGACCGTCGATG............................................................................................................................................2420.5010100000000
................................................................................................................TTTGCACCGTCTTTCACAGAAGGTTGA.................................................2720.5010100000000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACAGA........................................................2620.5010100000000
............................................................................................................................TTCACAGAAGGTTGATAAGCTACAACA.....................................2720.5010010000000
......................................................................................................................................................ACAACATC-------CCCAAAAAGCCCAAGGA......2520.5010100000000
.......................................................................................................TGCTGCTGCTTTGCACCGTCTTTC.............................................................2420.5010100000000
......................................................................................................TTGCTGCTGCTTTGCACCGTCTTTCA............................................................2620.5010100000000
...........................................................................................................................TTTCACAGAAGGTTGATAAGCTACA........................................2520.5010100000000
TGTCGACTCAACCCAATTCCGCTGACCA................................................................................................................................................................2820.5010100000000
........................ACCATATTCAGCAGACCGTCGAT.............................................................................................................................................2320.5010100000000
...................CGCTGACCATATTCAGCAGACCGTCG...............................................................................................................................................2620.5010100000000
............................TATTCAGCAGACCGTCGATGCGGTAAGA....................................................................................................................................2820.5010100000000
............................TATTCAGCAGACCGTCGATGCG..........................................................................................................................................2220.5010100000000
...............................TCAGCAGACCGTCGATGCGGTAAGA....................................................................................................................................2520.5010000100000
.....................................................................................................GTTGCTGCTGCTTTGCACC....................................................................1920.5010100000000
.......................GACCATATTCAGCAGACCGTCGATGA...........................................................................................................................................2620.5010100000000
...CGACTCAACCCAATTCCGCTGACCA................................................................................................................................................................2520.5010010000000
...............................TCAGCAGACCGTCGATGCGGTAA......................................................................................................................................2320.5010100000000
........CAACCCAATTCCGCTGACCATAT.............................................................................................................................................................2320.5010100000000
........CAACCCAATTCCGCTGACCATATTC...........................................................................................................................................................2520.5010100000000
....................................................................................................................................................ACACAACATC-------CCCAAAAAGCCCAAGGA......2720.5010100000000
..............................................................................................................GCTTTGCACCGTCTTTCACAGAAGGT....................................................2620.5010100000000
.......................................CCGTCGATGCGGTAAGTA------GC-AAAAG---..................................................................................................................2520.5010100000000
............................................................................................................................TTCACAGAAGGTTGATAAGCTACAACAC....................................2820.5010100000000
.......................................................................................................................................................CAACATC-------CCCAAAAAGCCCAAGGAGA....2620.5010100000000
.............................................................................................................................TCACAGAAGGTTGATAAGCTACAA.......................................2420.5010100000000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGAAG......................................................2520.5010000000100
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTTGCACC....................................................................2820.5010100000000
..................................................................................................................TGCACCGTCTTTCACAGAAGG.....................................................2120.5010100000000
................TTCCGCTGACCATATTCAGCAGA.....................................................................................................................................................2320.5010100000000
.......................................................................................................TGCTGCTGCTTTGCACCGTCA................................................................2120.5010100000000
..................................GCAGACCGTCGATGCGGTAAGTA------.............................................................................................................................2320.5010100000000
...............................TCAGCAGACCGTCGATGCGGTAAAA....................................................................................................................................2520.5010100000000
..............................TTCAGCAGACCGTCGATGCGGTAAGTT------.............................................................................................................................2720.5010100000000
.......................................................................................................TGCTGCTGCTTTGCACCGTC.................................................................2020.5010000100000
.........................................................................................................................TCTTTCACAGAAGGTTGATAAGCT...........................................2420.5010100000000
...............................TCAGCAGACCGTCGATGCGGTAAGTT------.............................................................................................................................2620.5010100000000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTTGCAC.....................................................................2750.4020200000000
TGTCGACTCAACCCAATTCCGCT.....................................................................................................................................................................2350.4020200000000
TGTCGACTCAACCCAATTCCGCTGA...................................................................................................................................................................2550.4020100000100
................................................................................TT-----------TGAAAGACGTTGCTGCTGCTT..........................................................................2350.4020200000000
.............................................................................................................................................AGCTACAACACAACATC-------CCCAAAAA...............2530.3310100000000
..............................................................................................................................CACAGAAGGTTGATAAGCTACAACA.....................................2530.3310100000000
.......................................................................................................................................TTGATAAGCTACAACACAACATC-------CCCAA..................2830.3310100000000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCCAAA.................2830.3310100000000
.............................................................................................................................................AGCTACAACACAACATC-------CCCAAAAAGCC............2830.3310100000000
................................................................................................................................................TACAACACAACATC-------CCCAAAAAGCCC...........2630.3310100000000
...............................................................................................................................................CTACAACACAACATC-------CCCAAAAAGCC............2630.3310010000000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAGA.............2930.3310100000000
.....................................................................................................................................................CACAACATC-------CCCAAAAAGCCCAAGG.......2530.3310100000000
................................................................................................................................................TACAACACAACATC-------CCCAAAAAGCCCAAG........2930.3310100000000
.................................................................................................................................AGAAGGTTGATAAGCTACAACACAACA................................2730.3310100000000
..................................................................................................................................................CAACACAACATC-------CCCAAAAAGCC............2330.3310100000000
..............................................................................................................................................GCTACAACACAACATC-------CCCAAAAAGC.............2630.3310100000000
...............................................................................................................................................CTACAACACAACATC-------CCCAAAA................2230.3310100000000
.................................................................................................................................................ACAACACAACATC-------CCCAAAAAGCC............2430.3310100000000
..................................................................................................................................................CAACACAACATC-------CCCAAAAAG..............2130.3310100000000
...........................................................................................................................................TAAGCTACAACACAACATC-------C......................2040.2510010000000
.............................................................................................TGAAAGACGTTGCTGCTGT............................................................................1950.2010100000000
..............................................................................AATT-----------TGAAAGACGTTGCTGCT..............................................................................2150.2010100000000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCA......................................................................2550.2010100000000
.............................................................................GAATT-----------TGAAAGACGTTGCTGC...............................................................................2150.2010010000000
...................................................................................................................................AAGGTTGATAAGCTACAACACAACA................................2550.2010100000000
.............................................................................................TGAAAGACGTTGCTGCTGCTTC.........................................................................2250.2010010000000
.............................................................................................TGAAAGACGTTGCTGCTGCTTT.........................................................................2250.2010100000000
.............................................................................GAATT-----------TGAAAGACGTTGCTGCTG.............................................................................2350.2010100000000
...............................................................................................AAAGACGTTGCTGCTGCT...........................................................................1850.2010100000000
.............................................................................................TGAAAGACGTTGCTGCTGCTC..........................................................................2150.2010010000000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCT...........................................................................2150.2010100000000
.................................................................................T-----------TGAAAGACGTTGCTGCTGT............................................................................2050.2010000001000
..............................................................................................GAAAGACGTTGCTGCTGCTTTGCAC.....................................................................2550.2010100000000
.............................................................................................TGAAAGACGTTGCTGCTGCAA..........................................................................2150.2010100000000
.................................................................................T-----------TGAAAGACGTTGCTGCTG.............................................................................1950.2010000000100
................................................................................TT-----------TGAAAGACGTTGCTGCTGC............................................................................2150.2010100000000
.............................................................................................TGAAAGACGTTGCTGCTGA............................................................................1960.1710100000000
droPer2
TGTCGACTCAACCCAATTCCGCTGACCATATTCAGCAGAGCGTCGATGCGGTAAGTA------GC-AAAAG---TCCGAATT-----------TGAAAGACGTTGCTGCTGCTTTGCACCGTCTTTCACAGAAGGTTGATAAGCTACAACACAACATC-------CCCAAAAAGCCCAAGG-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................TGACCATATTCAGCAGAGCGTCGATG............................................................................................................................................26212.00244200000
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TGAAA..........................................................................................2637.33220210100
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAG..............2827.00140140000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAA...............2724.509090000
.................TCCGCTGACCATATTCAGCAGAGCGTCGA..............................................................................................................................................2923.507070000
............................TATTCAGCAGAGCGTCGATGCGG.........................................................................................................................................2343.50142120000
................TTCCGCTGACCATATTCAGCAGAGCGT.................................................................................................................................................2723.006060000
.............................................................................................................................TCACAGAAGGTTGATAAGCTACAACAC....................................2713.003030000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACAG.........................................................2513.003030000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAA..................2432.678080000
....GACTCAACCCAATTCCGCTGACCATAT.............................................................................................................................................................2712.002020000
..............................................TGCGGTAAGTA------GC-AAAAG---TCCGAATT-----------...............................................................................................2632.006060000
..........................................................................TCCGAATT-----------TGAAAGACGTTGCTGCTG.............................................................................2622.004040000
.................TCCGCTGACCATATTCAGCAGAGCGTCG...............................................................................................................................................2822.004040000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACA..........................................................2412.002020000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCACC....................................................................2712.002110000
......................TGACCATATTCAGCAGAGCGTCGA..............................................................................................................................................2422.004040000
................TTCCGCTGACCATATTCAGCAGAGCG..................................................................................................................................................2621.503030000
......................TGACCATATTCAGCAGAGCGTCGAT.............................................................................................................................................2521.503030000
......................TGACCATATTCAGCAGAGCGTCGATGC...........................................................................................................................................2721.503210000
..............................................TGCGGTAAGTA------GC-AAAAG---TCCGAAT...........................................................................................................2531.334040000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAA.................2531.334040000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCAC.....................................................................2641.255230000
.................TCCGCTGACCATATTCAGCAGAGCGTC................................................................................................................................................2721.002020000
.............................................................................................TGAAAGACGTTGCTGCTGCTT..........................................................................2141.004220000
.......................................................................................................TGCTGCTGCTTTGCACCGTCTT...............................................................2211.001010000
.............CAATTCCGCTGACCATATTCAGCAG......................................................................................................................................................2511.001010000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGAAGG.....................................................2611.001010000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCACAA.........................................................2511.001010000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGAAGGT....................................................2711.001010000
............................................................................................................CTGCTTTGCACCGTCTTTCACAGAA.......................................................2511.001010000
..........................................................................................................TGCTGCTTTGCACCGTCTTTCAC...........................................................2311.001010000
.............................................................................................................TGCTTTGCACCGTCTTTCACAGA........................................................2311.001010000
.......................................................................................................TGCTGCTGCTTTGCACCGTCTTTCACA..........................................................2711.001010000
..........................................................................................................TGCTGCTTTGCACCGTCTA...............................................................1911.001010000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTGCACCG...................................................................2811.001010000
............................TATTCAGCAGAGCGTCGATGC...........................................................................................................................................2141.004400000
....................................................................................................................CACCGTCTTTCACAGAAGGTTG..................................................2211.001010000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCA...................2331.003030000
...................CGCTGACCATATTCAGCAGAGCGTCGA..............................................................................................................................................2721.002020000
................................................................................TT-----------TGAAAGACGTTGCTGCTG.............................................................................2040.753030000
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TGAAAG.........................................................................................2730.672020000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCCAA..................2730.672020000
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TGA............................................................................................2430.672010001
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TGAA...........................................................................................2530.672020000
......................TGACCATATTCAGCAGAGCGT.................................................................................................................................................2120.501100000
..........................................................................TCCGAATT-----------TGAAAGACGTTGCTGCTGC............................................................................2720.501010000
...................CGCTGACCATATTCAGCAGAGCGTCGAAA............................................................................................................................................2920.501100000
....................GCTGACCATATTCAGCAGAGCGTCGATG............................................................................................................................................2820.501010000
......................................................................G---TCCGAATT-----------TGAAAGACGTTGCTG................................................................................2420.501010000
............................................................................................................................................AAGCTACAACACAACATC-------CCCAAAAAG..............2720.501010000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CC.....................2440.502020000
.............................................................................................................................................AGCTACAACACAACATC-------CCCAAAAAGCC............2820.501010000
......................TGACCATATTCAGCAGAGCGTCGATGCGG.........................................................................................................................................2920.501100000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAA................2620.501010000
.......................GACCATATTCAGCAGAGCGTCGATG............................................................................................................................................2520.501010000
....................................................................AAG---TCCGAATT-----------TGAAAGACGTTGCTG................................................................................2620.501010000
................TTCCGCTGACCATATTCAGCAGAGC...................................................................................................................................................2520.501010000
...............................TCAGCAGAGCGTCGATGCGGTAAGTA------.............................................................................................................................2640.502020000
.................TCCGCTGACCATATTCAGCAGAGCGT.................................................................................................................................................2620.501010000
......................TGACCATATTCAGCAGAGC...................................................................................................................................................1920.501010000
..........................................................................TCCGAATT-----------TGAAAGACGTTGCTGCT..............................................................................2520.501010000
..............................................................................................GAAAGACGTTGCTGCTGCTA..........................................................................2040.502110000
..................CCGCTGACCATATTCAGCAGAGCG..................................................................................................................................................2420.501010000
......................TGACCATATTCAGCAGAGCG..................................................................................................................................................2020.501010000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTTGCAC.....................................................................2740.502110000
......................TGACCATATTCAGCAGAGCGTCGATGCG..........................................................................................................................................2820.501010000
...........................................................................................................................................TAAGCTACAACACAACATC-------CCCAAAAAA..............2820.501010000
....................GCTGACCATATTCAGCAGAGCGTC................................................................................................................................................2420.501010000
.......................GACCATATTCAGCAGAGCGTCGATGC...........................................................................................................................................2620.501010000
...................................................................AAAG---TCCGAATT-----------TGAAAGACGTTG...................................................................................2420.501010000
............................................................................................................................................AAGCTACAACACAACATC-------CCCAAAAA...............2620.501010000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCC....................2530.331010000
........................................................A------GC-AAAAG---TCCGAATT-----------TGAAAGACGT.....................................................................................2630.331010000
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TGAAAA.........................................................................................2730.331010000
........................................................................................................................................TGATAAGCTACAACACAACATC-------CCCA...................2630.331010000
....................................................AAGTA------GC-AAAAG---TCCGAATT-----------TGAAAGA........................................................................................2730.331010000
...........................................................................CCGAATT-----------TGAAAGACGTTGCTGCTG.............................................................................2530.331000001
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------...............................................................................................2130.331010000
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TGAAAGA........................................................................................2830.331010000
...................................................TAAGTA------GC-AAAAG---TCCGAATT-----------TG.............................................................................................2330.331010000
.......................................................TA------GC-AAAAG---TCCGAATT-----------TGAAAGACG......................................................................................2630.331010000
.......................................................TA------GC-AAAAG---TCCGAATT-----------TGAAAGACGT.....................................................................................2730.331010000
............................................................................CGAATT-----------TGAAAGACGTTGCTGCT..............................................................................2330.331010000
............................................................................................................................................AAGCTACAACACAACATC-------CCCAA..................2330.331010000
.......................................................................................................................................TTGATAAGCTACAACACAACATC-------CCCA...................2730.331010000
...................................................................................................................................AAGGTTGATAAGCTACAACACAACATC-------.......................2740.251010000
..............................................................................................GAAAGACGTTGCTGCTGCTTTG........................................................................2240.251010000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCC...........................................................................2140.251100000
.............................................................................................TGAAAGACGTTGCTGCTGCTTTG........................................................................2340.251010000
...............................................................................................AAAGACGTTGCTGCTGCTTTGC.......................................................................2240.251010000
............................TATTCAGCAGAGCGTCGATGCGGTA.......................................................................................................................................2540.251010000
................................................................................TT-----------TGAAAGACGTTGCTGCTGCTTT.........................................................................2440.251010000
...............................................................................................AAAGACGTTGCTGCTGCTTTG........................................................................2140.251010000
.............................ATTCAGCAGAGCGTCGATGCGGTAAG.....................................................................................................................................2640.251010000
................................CAGCAGAGCGTCGATGCGGT........................................................................................................................................2040.251001000
................................................................................TT-----------TGAAAGACGTTGCTGCTGCTT..........................................................................2340.251010000
................................................................................TT-----------TGAAAGACGTTGCTGCTGCTTTGCAC.....................................................................2840.251010000
..........................................TCGATGCGGTAAGTA------GC-AAAAG---TCCG..............................................................................................................2640.251010000
............................TATTCAGCAGAGCGTCGATGCGGTAAAA....................................................................................................................................2840.251010000
.................................................................................T-----------TGAAAGACGTTGCTGCTGCTTT.........................................................................2340.251010000
........................................................................................................................................TGATAAGCTACAACACAACATC-------C......................2340.251010000
.............................................................................................TGAAAGACGTTGCTGCTGC............................................................................1940.251010000
...............................TCAGCAGAGCGTCGATGCGGTAAG.....................................................................................................................................2440.251010000
............................TATTCAGCAGAGCGTCGATGCGGT........................................................................................................................................2440.251001000
.............................................................................................TGAAAGACGTTGCTGCTGCTTT.........................................................................2240.251010000
...........................................CGATGCGGTAAGTA------GC-AAAAA---..................................................................................................................2150.201010000
..............................................TGCGGTAAGTA------GC-AAAAG---TCCGAATA-----------...............................................................................................2660.171010000
..............................................TGCGGTAAGTA------GC-AAAAG---TCCGAAA...........................................................................................................2560.171010000
...................................................................................................................................AAGGTTGATAAGCTACAACA.....................................2060.171010000
droVir3
TGTCGACACAAACTGCAACTGCTGAGCAAAAACAGCAGAATATAGAAGAGGTCAGTA------AC-AATAG---CCCCAGCT-----------TAACTGATGTTGCGGCCGCCTTGCACGCGCTTTCCCAGTAAGTCGATAAGCTGCAGAACGA----------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................TAAGTCGATAAGCTGCAGAAAC...................................2211.001000010000000000000000000000000000000000000000000000000000000000
.......ACAAACTGCAACTGCTGAGCA................................................................................................................................................................2130.331001000000000000000000000000000000000000000000000000000000000000
....................................AGAATATAGAAGAGGTGGT.....................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
droFic1
CTTCGACTGCTGCTGATTCAT---------------------------------------CCA-TTT---GCGCAGCTTCTACCGAAGATCCTTGGAAAAAGTCAACAAGCAGCTGCGTTCGCTTTCACAAAAGTTTGATGATTTACAAAAGGATGTCAAACGTCTCCAA------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTCTGCA------------GATGA-CGTAGCCGGAACCGCTTCGGTGAATGCAG-----TTG-CTC---GTCCGGAATCTA-----------TCAAGGACATCGCAGACTCTCTGCGTGCGCTGACAAAAAAGGTTGATACGATGCAA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTCGATTGCATCTGAC---------AGTGCTCCGCCTATGGACAACTCTGTAAACGCCCTCGAG-CAGGG---TGGAACCC-----------TCAAAGATGTGGCTAATTCTATACGTTCCTTGTCACAACAAGTAAATTTTTTACAAGACGAAGTTAAG-----------CGCCTAAAG----AAASizeHit CountTotal NormTotal
No Reads
droYak3
T--CGGCTCGTCCCCATCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:38 AM