ID:

dps_2171

 Coordinate:

Unknown_group_666:48066-48216 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.3 -9.1 -9.0

Flybase annnotation

exon [dpse_GLEANR_7198:2]; CDS [Dpse\GA27963-cds]; intron [Dpse\GA27963-in]

Repeatable elements

NameClassFamilyStrand
Gypsy1-I_Dpse-intLTRGypsy+
mature
  1. Unknown_singleton_761:18229-18251 +
  2. Unknown_singleton_762:8451-8473 +
  3. Unknown_singleton_762:30214-30236 +
  4. Unknown_singleton_780:6185-6207 +
  5. Unknown_singleton_780:27401-27423 +
  6. Unknown_singleton_780:50009-50031 +
  7. Unknown_singleton_780:60232-60254 +
  8. Unknown_group_206:66436-66458 +
  9. Unknown_group_206:77139-77161 +
  10. Unknown_singleton_760:6230-6252 +
  11. Unknown_group_171:18621-18643 +
  12. Unknown_group_171:28933-28955 +
  13. Unknown_group_171:37058-37080 +
  14. Unknown_group_666:4692-4714 +
  15. Unknown_group_666:15619-15641 +
  16. Unknown_group_666:27210-27232 +
  17. Unknown_group_666:37606-37628 +
  18. dps_2171  Unknown_group_666:48164-48186 +
  19. Unknown_group_134:3674-3696 +
  20. Unknown_group_530:9313-9335 +
  21. Unknown_singleton_762:18626-18648 +
  22. Unknown_group_422:39612-39634 +
  23. Unknown_singleton_761:7898-7920 +
  24. Unknown_singleton_762:39941-39963 +
  25. Unknown_singleton_780:17154-17176 +
  26. Unknown_singleton_780:37878-37900 +
  27. Unknown_group_171:48190-48212 +
  28. Unknown_group_171:57849-57871 +
star
  1. Unknown_group_422:17586-17613 -
  2. Unknown_group_19:33692-33719 -
  3. Unknown_singleton_761:18186-18213 +
  4. Unknown_singleton_762:18583-18610 +
  5. Unknown_singleton_762:30171-30198 +
  6. Unknown_singleton_780:60189-60216 +
  7. Unknown_group_206:57983-58010 -
  8. Unknown_singleton_760:6187-6214 +
  9. Unknown_group_592:2388-2415 -
  10. Unknown_group_171:18578-18605 +
  11. Unknown_group_666:37563-37590 +
  12. dps_2171  Unknown_group_666:48121-48148 +
  13. Unknown_singleton_736:281-308 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTGCCGACTTCGCAAGGGCCCCGTGAGGGGCGCGACCCACGAAACCGTAAGCTACGTATACATCCCCTTATGGGATTAGATAAGTACTACATCCAATGTAAACATCTTCTTACTCGCACCGCTCAAGCAGGATAGGGGGAGGGTATTAATACTTCTAGTTAAGACAGGCAGGTTCTAACCGACAGGCATTTTCTCCCTAGAATCGACAGAAGACATGAAGCGTCTAAGAGATGGAAGGCAAGCTCGGCCG
*********************************************************************************************************...........((...................(((((..........)))))...........)).******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M062
head
 GSM343916
embryo
 M059
embryo
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAG.............................. 24 0 6 1.83 11 4 2 5 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAGC............................. 25 0 6 1.17 7 2 1 4 0 0 0 0
......................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAG.............................. 23 0 6 1.17 7 0 7 0 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAGCG............................ 26 0 6 1.00 6 0 3 3 0 0 0 0
...................................................................................................................................................................................................CCCTAGAATCGACAGAAGACATGAA............................... 25 0 6 0.83 5 0 5 0 0 0 0 0
....................................................................................................................................................AATACTTCTAGTTAAGACAGGCA................................................................................ 23 0 20 0.80 16 11 4 1 0 0 0 0
....................................................................................................................................................AATACTTCTAGTTAAGACAGGCAG............................................................................... 24 0 20 0.70 14 11 0 0 1 0 1 1
......................................................................................................................................................................................................................................ATTGGAGGGCAAGCTCGG... 18 3 20 0.45 9 9 0 0 0 0 0 0
....................................................................................................................................................AATACTTCTAGTTAAGACAGGC................................................................................. 22 0 20 0.35 7 3 2 2 0 0 0 0
......................................................................................................................................................................................................TAGAATCGACAGAAGACATGAA............................... 22 0 6 0.33 2 0 2 0 0 0 0 0
........................................................................................................................................................................................................GAATCGACAGAAGACATGAAGCG............................ 23 0 6 0.33 2 0 2 0 0 0 0 0
......................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAGC............................. 24 0 6 0.33 2 0 0 2 0 0 0 0
......................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAGCG............................ 25 0 6 0.33 2 0 2 0 0 0 0 0
......................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAGCGTC.......................... 27 0 6 0.33 2 0 2 0 0 0 0 0
....................................................................................................................................................AATACTTCTAGTTAAGACAGGCAGGT............................................................................. 26 0 20 0.30 6 6 0 0 0 0 0 0
.....................................................................................................................................................ATACTTCTAGTTAAGACAGGCAG............................................................................... 23 0 20 0.25 5 5 0 0 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAGG.............................. 24 1 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGATAGAAGACATGAAGCG............................ 26 1 6 0.17 1 0 0 1 0 0 0 0
................................................................................................................................................................................................TCTCCCTAGAATCGACAGAAGACA................................... 24 0 6 0.17 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................AGAATCGACAGAAGACATGAAG.............................. 22 0 6 0.17 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................AGAATCGACAGAAGACATGAAGCGTCTA........................ 28 0 6 0.17 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAGCGT........................... 27 0 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAA............................... 23 0 6 0.17 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................CTCCCTAGAATCGACAGAAGACATG................................. 25 0 6 0.17 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................CTAGAATCGACAGAAGACATGA................................ 22 0 6 0.17 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................CTCCCTAGAATCGACAGAAGACA................................... 23 0 6 0.17 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................CTTGAATCGACAGAAGACATGAAG.............................. 24 1 6 0.17 1 0 0 1 0 0 0 0
.........................................................................................................TCTTCTTACTCGCACCGCTCAAGCAGGA...................................................................................................................... 28 0 13 0.15 2 2 0 0 0 0 0 0
........................................................................................................................................................CTTCTAGTTAAGACAGGCAGG.............................................................................. 21 0 20 0.15 3 2 0 0 1 0 0 0
....................................................................................................................................................AATACTTCTAGTTAAGACAGG.................................................................................. 21 0 20 0.15 3 3 0 0 0 0 0 0
................................................................................ATAAGTACTACATCCAATGT....................................................................................................................................................... 20 0 16 0.13 2 2 0 0 0 0 0 0
...............................................................................................................................................................................CTAACCGACAGGCATTTTCTCCCTA................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0
................................................TAAGCTACGTATACATCCCCTTATGG................................................................................................................................................................................. 26 0 10 0.10 1 1 0 0 0 0 0 0
...................................................GCTACGTATACATCCCCTTATGG................................................................................................................................................................................. 23 0 10 0.10 1 1 0 0 0 0 0 0
............................................................................................................TCTTACTCGCACCGCTCAAGCAGGA...................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0
...............................................................................................................TACTCGCACCGCTCAAGCAGGATA.................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0
............................................................................................TCCAATGTAAACATCTTCTTACTCGCAC................................................................................................................................... 28 0 10 0.10 1 0 0 0 0 1 0 0
................................................TAAGCTACGTATACATCCCCTTA.................................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0
........................................................................................................................CGCTCAAGCAGGATAGGGGG............................................................................................................... 20 0 20 0.10 2 1 0 1 0 0 0 0
........................................................................................................CTCTTCTTACTCGCACCGCTCAAGCAGGA...................................................................................................................... 29 1 13 0.08 1 1 0 0 0 0 0 0
................................................................................................ATGTAAACATCTTCTTACTCGCACCGC................................................................................................................................ 27 0 13 0.08 1 0 1 0 0 0 0 0
................................................................................................ATGTAAACATCTTCTTACTCGCA.................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0 0
................................................................................ATAAGTACTACATCCAATGTAAA.................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0 0 0
................................................................................ATAAGTACTACATCCAATGTAAAC................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0 0 0 0
..................................................AGCTACCTCTACATCCCGT...................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 1 0
........................................................................................................................CGCTCAAGCAGGATAGGGGGA.............................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................TTCTAGTTAAGACAGGCAGG.............................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0
....................................................................................................................GCACCGCTCAAGCAGGATAGGGGG............................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................CTTCTAGTTAAGACAGGCAGGT............................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................................................................ACTTCTAGTTAAGACAGGCA................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAGAGATGGAAGGCAAGC....... 18 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGAGAGATGGAAGGCAAGCTCGGC.. 24 1 20 0.05 1 0 0 0 0 0 0 1
......................................................................................................................................................................................................................................GATGGAAGGCAAGCTCGGC.. 19 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGGC.. 24 0 20 0.05 1 0 0 0 1 0 0 0
..............................................................................................................................................................................TCTAACCGACAGGCATTTTCTCC...................................................... 23 0 20 0.05 1 0 0 1 0 0 0 0
...............................................................................................................TACTCGCACCGCTCAAGCAGGAT..................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................................................................................................................TCTAACCGACAGGCATTTTCTCCCTAGA................................................. 28 0 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATGGAAGGCAAGCTCGGC.. 18 0 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................TAAGACAGGCAGGTTCTAACCGACA.................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAAGAGATGGAAGGCAATCTCGGC.. 24 1 20 0.05 1 0 0 1 0 0 0 0
.....................................................................................................................................................ATACTTCTAGTTAAGACAGGCAGG.............................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CTAACCGACAGGCATTTTCTCC...................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGGAAGGCAAGCTCGGCC. 18 0 20 0.05 1 1 0 0 0 0 0 0
...............................................................................................................TACTCGCACCGCTCAAGCAGGATAGG.................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................ATTGGAGGGCAAGCTCGGC.. 19 3 20 0.05 1 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCT...... 20 0 20 0.05 1 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................GAAGCGTCTAAGAGATGGAAGGCAAGC....... 27 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................................GACAGGCAGGTTCTAACCGACAGGCA.............................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................................TAACCGACAGGCATTTTCTCCCTAGAA................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................TCGCACCGCTCAAGCAGGATAGG.................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................CGCTCAAGCAGGATAGGG................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................CGCACCGCTCAAGCAGGATAGGG................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0
............................................................................................................................................................................................ATTTTCTCCCTAGAATCGACA.......................................... 21 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAGAGATGGAAGGCAAGCTCGGCC. 24 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................................................................................................ATTAATACTTCTAGTTAAGACAGGCAG............................................................................... 27 0 20 0.05 1 0 0 1 0 0 0 0
..............................................................................................................TTACTCGCACCGCTCAAGCAGGA...................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................................................................................................................TCTAACCGACAGGCATTTTCTCCCTA................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0
...............................................................................................................TACTCGCACCGCTCAAGCAGG....................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................................................TTACTCGCACCGCTCAAGCAGGATAG................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................CTAAGAGATGGAAGGCAAGC....... 20 0 20 0.05 1 0 0 1 0 0 0 0
........................................................................................................................CGCTCAAGCAGGATAGGGG................................................................................................................ 19 0 20 0.05 1 0 0 1 0 0 0 0
...........................................................................................................................TCAAGCAGGATAGGGGGAT............................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0
.....................................................................................................................................................ATACTTCTAGTTAAGACAGGCA................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................................................................................................................AAGACAGGCAGGTTCTAACCGACA.................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................................CCGCTCAAGCAGGATAGGGGG............................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................CTTCTAGTTAAGACAGGCAGGTT............................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................................................................................................................TCTAACCGACAGGCATTTTCTC....................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................AGAGATGGAAGGCAAGCTCGG... 21 0 20 0.05 1 1 0 0 0 0 0 0
............................................................................................................................................................TAGTTAAGACAGGCAGGTTCTAAC....................................................................... 24 0 20 0.05 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TGAAGCGTCTAAGAGATGGAAGGCAAG........ 27 0 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

GAACGGCTGAAGCGTTCCCGGGGCACTCCCCGCGCTGGGTGCTTTGGCATTCGATGCATATGTAGGGGAATACCCTAATCTATTCATGATGTAGGTTACATTTGTAGAAGAATGAGCGTGGCGAGTTCGTCCTATCCCCCTCCCATAATTATGAAGATCAATTCTGTCCGTCCAAGATTGGCTGTCCGTAAAAGAGGGATCTTAGCTGTCTTCTGTACTTCGCAGATTCTCTACCTTCCGTTCGAGCCGGC
********************************************************************************...........((...................(((((..........)))))...........)).********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 M062
head
 GSM444067
head
.......................................................................................................................................................................................GTCCGTAAAAGAGGGATCTTAGCT............................................ 24 0 20 15.70 314 313 0 1 0 0 0 0 0
............................................TGGCATTCGATGCATATGTAGGGGAAT.................................................................................................................................................................................... 27 0 8 2.88 23 0 19 4 0 0 0 0 0
........................................................................................................................................................................................TCCGTAAAAGAGGGATCTTAGCT............................................ 23 0 20 2.65 53 45 0 0 3 5 0 0 0
.......................................................................................................................................................................................GTCCGTAAAAGAGGGATCTTAGCTG........................................... 25 0 20 2.15 43 42 0 1 0 0 0 0 0
.....................................................................................................................................ATCCCCCTCCCATAATTATGAAGAT............................................................................................. 25 0 20 2.00 40 39 0 0 1 0 0 0 0
...................................................................................................................................CTATCCCCCTCCCATAATTATGAAGAT............................................................................................. 27 0 20 1.80 36 34 1 0 0 1 0 0 0
............................................................................AATCTATTCATGATGTAGGTTACATT..................................................................................................................................................... 26 0 16 1.69 27 0 22 5 0 0 0 0 0
..................................................................GGAATACCCTAATCTATTCATGAT................................................................................................................................................................. 24 0 20 1.45 29 28 0 0 0 0 1 0 0
....................................GGGTGCTTTGGCATTCGATGCATAT.............................................................................................................................................................................................. 25 0 5 1.40 7 3 2 0 0 0 2 0 0
.......................................................................................................................................................................................GTCCGTAAAAGAGGGATCTTAGC............................................. 23 0 20 1.30 26 26 0 0 0 0 0 0 0
...................................TGGGTGCTTTGGCATTCGATGCA................................................................................................................................................................................................. 23 0 5 1.20 6 6 0 0 0 0 0 0 0
....................................................................................................................................TATCCCCCTCCCATAATTATGAAGAT............................................................................................. 26 0 20 0.90 18 15 0 3 0 0 0 0 0
...................................TGGGTGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 24 0 5 0.80 4 3 0 0 1 0 0 0 0
..........................................................................................................................................................................................CGTAAAAGAGGGATCTTAGCTGTC......................................... 24 0 20 0.80 16 0 16 0 0 0 0 0 0
...............................................................................CTATTCATGATGTAGGTTACATT..................................................................................................................................................... 23 0 16 0.75 12 2 3 7 0 0 0 0 0
.............................................................................ATCTATTCATGATGTAGGTTACATT..................................................................................................................................................... 25 0 16 0.69 11 0 5 6 0 0 0 0 0
.........................................................................................................AGAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 25 0 13 0.62 8 5 0 0 0 3 0 0 0
......................................................................................................TGTAGAAGAATGAGCGTGGCGAGT............................................................................................................................. 24 0 13 0.62 8 1 6 1 0 0 0 0 0
....................................GGGTGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 23 0 5 0.60 3 3 0 0 0 0 0 0 0
.................................................................GGGAATACCCTAATCTATTCATGAT................................................................................................................................................................. 25 0 20 0.60 12 12 0 0 0 0 0 0 0
..........................................................................................................GAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 24 0 20 0.60 12 7 2 3 0 0 0 0 0
........................................................................................................................................................GAAGATCAATTCTGTCCGTCCAAGAT......................................................................... 26 0 20 0.50 10 10 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTACTTCGCAGATTCTCTACCTTCCGT.......... 27 0 20 0.50 10 10 0 0 0 0 0 0 0
.....................................................................................................TTGTAGAAGAATGAGCGTGGCGAGT............................................................................................................................. 25 0 13 0.46 6 2 3 0 0 1 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAAGAGGGATCTTAGC............................................. 25 0 20 0.45 9 9 0 0 0 0 0 0 0
........................................................................................................................................CCCCTCCCATAATTATGAAGATCAAT......................................................................................... 26 0 20 0.45 9 3 0 0 6 0 0 0 0
...........................................................................TAATCTATTCATGATGTAGGTTACATT..................................................................................................................................................... 27 0 16 0.44 7 2 2 3 0 0 0 0 0
.....................................GGTGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 22 0 7 0.43 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................................GTCTGCCCAAGCTTGGCTG................................................................... 19 3 20 0.40 8 8 0 0 0 0 0 0 0
..................................TTGGGTGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 25 1 5 0.40 2 1 0 0 1 0 0 0 0
....................................GGGTGCTTTGGCATTCGATGCA................................................................................................................................................................................................. 22 0 5 0.40 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................TCCGTAAAAGAGGGATCTTAGCTG........................................... 24 0 20 0.40 8 8 0 0 0 0 0 0 0
....................................................................................AATGATGTAGGTTACATTTGTA................................................................................................................................................. 22 1 5 0.40 2 0 2 0 0 0 0 0 0
..................................CTGGGTGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 25 0 5 0.40 2 2 0 0 0 0 0 0 0
...............................................................................CTATTCATGATGTAGGTTACATTTGTA................................................................................................................................................. 27 0 5 0.40 2 0 2 0 0 0 0 0 0
.....................................................................................................CTGTAGAAGAATGAGCGTGGCGAGT............................................................................................................................. 25 1 13 0.38 5 0 5 0 0 0 0 0 0
............................................TGGCATTCGATGCATATGTAGGGGAA..................................................................................................................................................................................... 26 0 8 0.38 3 0 1 0 1 1 0 0 0
...................................................................................................................................................................................GGCTGTCCGTAAAAGAGGGATCTTAG.............................................. 26 0 20 0.35 7 6 1 0 0 0 0 0 0
.......................................................................................................................................................................................GTCCGTAAAAGAGGGATCTTAGCTGT.......................................... 26 0 20 0.35 7 7 0 0 0 0 0 0 0
....................................................................................................................................................................................GCTGTCCGTAAAAGAGGGATCTTAGC............................................. 26 0 20 0.35 7 7 0 0 0 0 0 0 0
...................................TGTGTTCTTTCGCATTCGATGCAT................................................................................................................................................................................................ 24 3 6 0.33 2 2 0 0 0 0 0 0 0
.....................................................................ATACCCTAATCTATTCATGATGTAGGT........................................................................................................................................................... 27 0 16 0.31 5 0 0 5 0 0 0 0 0
.......................................................................................................GTAGAAGAATGAGCGTGGCGAGT............................................................................................................................. 23 0 13 0.31 4 0 0 4 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAAGAGGGATCTTAGCT............................................ 26 0 20 0.30 6 0 0 0 4 1 0 1 0
...................................................CGATGCATATGTAGGGGAATAC.................................................................................................................................................................................. 22 0 10 0.30 3 0 0 3 0 0 0 0 0
..........................................................................................................................................................................................CGTAAAAGAGGGATCTTAGCT............................................ 21 0 20 0.30 6 5 0 0 0 1 0 0 0
....................................................GATGCATATGTAGGGGAATACCCT............................................................................................................................................................................... 24 0 10 0.30 3 0 0 3 0 0 0 0 0
...........................................TTGGCATTCGATGCATATGTAGGGGAAT.................................................................................................................................................................................... 28 0 8 0.25 2 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................GTACTTCGCAGATTCTCTACCT............... 22 0 20 0.25 5 5 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCGTAAAAGAGGGATCTTAGCTG........................................... 23 0 20 0.25 5 4 0 0 1 0 0 0 0
..................................................................................................................................CCTATCCCCCTCCCATAATTATGAAGAT............................................................................................. 28 0 20 0.25 5 0 0 0 5 0 0 0 0
................................................................................TATTCATGATGTAGGTTACATT..................................................................................................................................................... 22 0 16 0.25 4 0 2 2 0 0 0 0 0
........................................................................................................................................................................................TCCGTAAAAGAGGGATCTTAGCTGTC......................................... 26 0 20 0.25 5 3 0 2 0 0 0 0 0
.......................................................................................................GTAGAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 27 0 13 0.23 3 0 0 0 0 3 0 0 0
...............................................................................CTATTCATGATGTAGGTAACATTTGTA................................................................................................................................................. 27 1 5 0.20 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................GTAAAAGAGGGATCTTAGCTGTC......................................... 23 0 20 0.20 4 2 1 1 0 0 0 0 0
..............................................................................................................................................................CAATTCTGTCCGTCCAAGAT......................................................................... 20 0 20 0.20 4 4 0 0 0 0 0 0 0
....................................GGGTGCTTTGGCATTCGATGCATA............................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0
....................................GGGTGCTTTGGCATTCGATGAAT................................................................................................................................................................................................ 23 1 5 0.20 1 0 0 0 0 0 1 0 0
.................................GCTGGGTGCTTTGGCATTCGATGCA................................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................CTGTCCGCCCGAGCTTGGC..................................................................... 19 3 20 0.20 4 4 0 0 0 0 0 0 0
............................................................................................AGGTAACATTTGTAGAAGAATGAGCGT.................................................................................................................................... 27 1 10 0.20 2 2 0 0 0 0 0 0 0
..................................CTGGGTGCTTTGGCATTCGATGCA................................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0 0
...................................TGGGTGCTTTGGCATTCGATGCATAT.............................................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0 0 0 0
..............................................................................TCTATTCATGATGTAGGTTACATT..................................................................................................................................................... 24 0 16 0.19 3 0 1 2 0 0 0 0 0
.............................................................................ATCTATTCATGATGTAGGTTACAT...................................................................................................................................................... 24 0 16 0.19 3 0 0 3 0 0 0 0 0
..........................................................................................GTAGGTAACATTTGTAGAAGAAT.......................................................................................................................................... 23 1 11 0.18 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................ATCTTAGCTGTCTTCTGTACTTCGC............................ 25 0 6 0.17 1 1 0 0 0 0 0 0 0
....................................GGTTGCTTTGGCATTCGATGCATAT.............................................................................................................................................................................................. 25 1 6 0.17 1 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................TCTTAGCTGTCTTCTGTACTTCGCAGAT........................ 28 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCGTAAAAGAGGGATCTTAGCTGTCT........................................ 26 0 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTTAGCTGTCTTCTGTACTTCGCA........................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................AAGAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 26 1 13 0.15 2 1 0 0 0 0 1 0 0
...................................................................................................................................................................................GGCTGTCCGTAAAAGAGGGATCTTAGC............................................. 27 0 20 0.15 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTACTTCGCAGATTCTCTACCT............... 23 0 20 0.15 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTACTTCGCAGATTCTCTACCTTCCGTT......... 28 0 20 0.15 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................................GGCTGTCCGTAAAAGAGGGATCTTA............................................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0
.....................................................................................................................................ATCCCCCTCCCATAATTATGAAGA.............................................................................................. 24 0 20 0.15 3 3 0 0 0 0 0 0 0
...........................................................................................................AAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 23 0 20 0.15 3 0 0 1 0 1 1 0 0
..................................................................................................................................................................................TGGCTGTCCGTAAAAGAGGGATCTT................................................ 25 0 20 0.15 3 3 0 0 0 0 0 0 0
...............................................................AGGGGAATACCCTAATCTATTCATGAT................................................................................................................................................................. 27 0 20 0.15 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................CAATTCTGTCCGTCCAAGATTGGCT.................................................................... 25 0 20 0.15 3 1 0 2 0 0 0 0 0
.......................................................................................................................................................TGAAGATCAATTCTGTCCGTCCAAGAT......................................................................... 27 0 20 0.15 3 0 3 0 0 0 0 0 0
............................................................................................................................................................................................TAAAAGAGGGATCTTAGCT............................................ 19 0 20 0.15 3 3 0 0 0 0 0 0 0
.......................................................................................................................................CCCCCTCCCATAATTATGAAGATCAAT......................................................................................... 27 0 20 0.15 3 0 0 0 3 0 0 0 0
......................................GTGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 21 0 7 0.14 1 1 0 0 0 0 0 0 0
.....................................GGTGCTTTGGCATTCGATGCA................................................................................................................................................................................................. 21 0 7 0.14 1 1 0 0 0 0 0 0 0
..............................GGCGCTGGGTGCTTTGGCAT......................................................................................................................................................................................................... 20 1 7 0.14 1 0 0 0 0 0 1 0 0
...........................................................................AAATCTATTCATGATGTAGGTTACATT..................................................................................................................................................... 27 1 16 0.13 2 0 1 1 0 0 0 0 0
.......................................TGCTTTGGCATTCGATGCAT................................................................................................................................................................................................ 20 0 8 0.13 1 1 0 0 0 0 0 0 0
..................................CTGGGTGCTTTGGCATTCGATGC.................................................................................................................................................................................................. 23 0 8 0.13 1 1 0 0 0 0 0 0 0
............................................TGGCATTCGATGCATATGTAGGGG....................................................................................................................................................................................... 24 0 8 0.13 1 0 1 0 0 0 0 0 0
.............................................GGCATTCGATGCATATGTAGGGGAATA................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0 0 0 0 0
....................................GGGTGCTTTGGCATTCGAT.................................................................................................................................................................................................... 19 0 8 0.13 1 1 0 0 0 0 0 0 0
....................................GGGTGCTTTGGCATTCGATGC.................................................................................................................................................................................................. 21 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................GGCATTCGATGCATATGTAGGGGAAT.................................................................................................................................................................................... 26 0 8 0.13 1 0 1 0 0 0 0 0 0
..........................................................................TTAATCTATTCATGATGTAGGTTACATT..................................................................................................................................................... 28 1 16 0.13 2 0 2 0 0 0 0 0 0
............................................TGGCATTCGGTGCATATGTAGGGGAAT.................................................................................................................................................................................... 27 1 9 0.11 1 0 1 0 0 0 0 0 0
...............................................CATTCGATGCATATGTAGGGGAAT.................................................................................................................................................................................... 24 0 10 0.10 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCAGATTCTCTACCTTCCGT.......... 20 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACTTCGCAGATTCTCTACCTTCCGT.......... 26 0 20 0.10 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCGTAAAAGAGGGATCTTAGCT............................................ 22 0 20 0.10 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................CCGTAAAAGAGGGATCTTAGCTGTC......................................... 25 0 20 0.10 2 1 0 1 0 0 0 0 0
..................................................................................................................................................................TCTGTCCGTCCAAGATTGGCTGTC................................................................. 24 0 20 0.10 2 0 2 0 0 0 0 0 0
................................................................GGGGAATACCCTAATCTATTCATGAT................................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................ATGCATATGTAGGGGAATACA................................................................................................................................................................................. 21 1 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................................................................................CCCCCTCCCATAATTATGAAGA.............................................................................................. 22 0 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAAGGGGGATCTTAGCT............................................ 26 1 20 0.10 2 2 0 0 0 0 0 0 0
...................................................CGATGCATATGTAGGGGAATACC................................................................................................................................................................................. 23 0 10 0.10 1 1 0 0 0 0 0 0 0
............................................................................................................AGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0
...........................................................................................TAGGTAACATTTGTAGAAGAATGAGCGT.................................................................................................................................... 28 1 10 0.10 1 1 0 0 0 0 0 0 0
..................................................TCGATGCATATGTAGGGGAATACCCT............................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0
...................................................................GAATACCCTAATCTATTCATGAT................................................................................................................................................................. 23 0 20 0.10 2 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................TCGCAGATTCTCTACCTTCCGT.......... 22 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTCCGTAAAAGAGGGATCTTAGCTGTC......................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0
.....................................GGTGCTTTGGCATTCGATGC.................................................................................................................................................................................................. 20 0 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................TGAGCGTGGCGAGTTCGTCCTAT.................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTCCGTAAAAGAGGGATCTTAGCTC........................................... 25 1 20 0.10 2 2 0 0 0 0 0 0 0
..........................................................................................GTAGGTAACATTTGTAGAAGA............................................................................................................................................ 21 1 11 0.09 1 1 0 0 0 0 0 0 0
................................TGCTGGGTGCTTTGGTAT......................................................................................................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................AAAAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 26 2 13 0.08 1 0 0 0 0 0 1 0 0
.........................................................................................................AGAAGAATGATCGTGGCGAGTTCGT......................................................................................................................... 25 1 13 0.08 1 0 0 0 0 1 0 0 0
......................................................................................................ATAAGAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 28 3 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................AAAGAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 27 2 13 0.08 1 0 0 0 0 0 1 0 0
.........................................................................................................AGAAGAATGAGCGTGGCGAGTGCGT......................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0 0 0 0
....................................................................................................CTTGTAGAAGAATGAGCGTGGCGAGT............................................................................................................................. 26 1 13 0.08 1 0 1 0 0 0 0 0 0
.........................................................................................................AGAAGAATGAGCGTGGCGAGTTCGTCCT...................................................................................................................... 28 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................AGAAGAATGAGCGTGGCGAGTTCG.......................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................AGAAGAATGAGCGTGGCG................................................................................................................................ 18 0 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................TAGAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 26 0 13 0.08 1 0 0 0 0 1 0 0 0
........................................................................................................AAGAAGAATGAGCGTGGCGAGTTCG.......................................................................................................................... 25 1 13 0.08 1 1 0 0 0 0 0 0 0
............................................................................AATCTATTCATGATGTAGGTTACATTT.................................................................................................................................................... 27 0 16 0.06 1 0 1 0 0 0 0 0 0
............................................................................AATCTATTCATGATGTAGGTTACAT...................................................................................................................................................... 25 0 16 0.06 1 0 0 1 0 0 0 0 0
.............................................................................ATCTATTCATGATGTAGGTTACACT..................................................................................................................................................... 25 1 16 0.06 1 0 1 0 0 0 0 0 0
...........................................................................TAATCTATTCATGATGTAGGTTACAT...................................................................................................................................................... 26 0 16 0.06 1 1 0 0 0 0 0 0 0
...............................................................................CTATTCATGATGTAGGTTACAT...................................................................................................................................................... 22 0 16 0.06 1 1 0 0 0 0 0 0 0
.............................................................................ATCTATTCATGATGTAGGTTACA....................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0 0 0 0
................................................................................TATTCATGATGTAGGTTACAT...................................................................................................................................................... 21 0 16 0.06 1 1 0 0 0 0 0 0 0
...........................................................................TAATCTATTCATGATGTAGGTTACATTT.................................................................................................................................................... 28 0 16 0.06 1 1 0 0 0 0 0 0 0
..............................................................................TCTATTCATGTTGTAGGTTACATT..................................................................................................................................................... 24 1 16 0.06 1 0 0 1 0 0 0 0 0
............................................................................AATCCATTCATGATGTAGGTTACATT..................................................................................................................................................... 26 1 16 0.06 1 0 1 0 0 0 0 0 0
...........................................................................TAATCTATTCATGATGTAGGTTACA....................................................................................................................................................... 25 0 16 0.06 1 1 0 0 0 0 0 0 0
...............................................................................CTATTCATGATGTAGGTAACATTTGT.................................................................................................................................................. 26 1 16 0.06 1 1 0 0 0 0 0 0 0
..................................................................................TTCATGATGTAGGTTACATT..................................................................................................................................................... 20 0 16 0.06 1 0 0 1 0 0 0 0 0
.......................................................................ACCCTAATCTATTCATGATGTAGGT........................................................................................................................................................... 25 0 16 0.06 1 0 1 0 0 0 0 0 0
..............................................................................TCCATTCATGATGTAGGTTACATT..................................................................................................................................................... 24 1 16 0.06 1 0 1 0 0 0 0 0 0
......................................................................................TGATGTAGGTTACATT..................................................................................................................................................... 16 0 16 0.06 1 0 1 0 0 0 0 0 0
.......................................................................ACCCTAATCTATTCATGATGT............................................................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................AATTATGAAGATCAATTCTGTCCGT................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................AAGAATGAGCGTGGCGAGTTCCT......................................................................................................................... 23 1 20 0.05 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................GTCCAAGATTGGCTGTCCGTA............................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................ATCAATTCCGTCCGTCCAAGATCGGCT.................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................GGCTGTCCGTAAAAGAGGGATCTTG............................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................AACTATCCCCCTCCCATAATTATGAAGAT............................................................................................. 29 2 20 0.05 1 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................ACTTCGCAGATTCTCTACCTTCCGTT......... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................TCCCCCTCCCATAATTATGAAGAT............................................................................................. 24 0 20 0.05 1 0 0 1 0 0 0 0 0
....................................................................................................................................TATCCCCCTCCCATAATTATTAAGAT............................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAAGAGGGATCTTAGCTG........................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................TCGTCCTATCCCCCTCCCATAATTAT................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................GTAGGGGAATACCCTAATCTATTCAT.................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................ATGAGCGTGGCGAGTTCGTCCTAT.................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................................ATCCCCCTCCCATAATTATGAAGATCAA.......................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCGTAAAAGAGGGATCTTAGC............................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TACTTCGCAGATTCTCTACCTTCCG........... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................GGAATACCCTAATCTATTCATGATG................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................AATTCTGTCCGTCCAAGATTGGCT.................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TTCTGTCCGTCCAAGATTGGCT.................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................CAATTCTGTCCGTCCAAGATT........................................................................ 21 0 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................................................CTCCCATAATTATGAAGATCAATT........................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................TATGAAAATCAATTCTGTCCGTCCA............................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................GCAATTCTGTCCGTCCAAGA.......................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................GGCGAGTTCGTCCTATCCCCCTCCCAT......................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTTCGCAGATTCTCTACCTT.............. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TGCCCGTAAAAGAGGGATCTTAGCT............................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................TCGTCCTGTCCCCCTCCCATAA....................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................AAGGGGAATACCCTAATCTATTCATGAT................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................TGTGGCGAGTTCGTCCTATC................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................AATACCCTAATCTATTCATGAT................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAAGAGGGATCTTA............................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................GAATGAGCGTGGCGAGTTCGTCCT...................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTCCATAAAAGAGGGATCTTAGCTGTC......................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................GCAGATTCTCTACCTTCCGTT......... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................GAATGAGCGTGGCGAGTTCGTCCTAT.................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGTTCGTCCTATCCCCCTCCCATAA....................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................AAGACTGAGCGTGGCGAGTTCGT......................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 1 0 0
...........................................................................................................AAGAATGAGCGTGGCGAGTT............................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0 0 0
........................................................................................................................GCGAGTTCGTCCTATCCCCCTCCCAT......................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................CCCCTCCCATAATTATGAAGATTAAT......................................................................................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................AATAAAAGAGGGATCTTAGCTG........................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................ATCCCCCTCCCATAATTATGAAGATCAAT......................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................CCTATCCCCCTCCCATAATTATG.................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TAAAAGAGGGATCTTAGCTGT.......................................... 21 0 20 0.05 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................TGTCCGTAAAAGATGGATCTTAGCT............................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCCTAAAAGAGGGATCTTAGCT............................................ 26 1 20 0.05 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................GCTGTCCGTAAAAGAGGGATCTTAGCTC........................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................ATCAATTCTGTCCGTCCGAGAT......................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 1
...................................................................................................................................ATATCCCCCTCCCATAATTATGAAGA.............................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................ACAATTCTGTCCGTCCAAGAT......................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTACTTCGCAGATTCTCTACCTTCCGTT......... 29 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACTTCGCAGATTCTCTACCTTCCGTT......... 28 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................CCCTCCCATAATTATGAAGATCAAT......................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CCAAGATTGGCTGTCCGTA............................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAGGAGGGATCTTAGCT............................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................CCTATCCCCCTCCCATAATTATGATGAT............................................................................................. 28 1 20 0.05 1 0 0 0 1 0 0 0 0
..........................................................................................................AAAGAATGAGCGTGGCGAGTTCGT......................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................CGTCCAAGATTGGCT.................................................................... 15 0 20 0.05 1 0 0 1 0 0 0 0 0
.........................................................................................................................................CCCTCCCATAATTATGAAGAT............................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTACTTCGCAGATTCTCTACCTTC............. 25 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................AATCCCCCTCCCATAATTATGAAGAT............................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................GTCCCCCTCCCATAATTATGAAAAT............................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................CCCTCCCATAATTATGAAGATCAATT........................................................................................ 26 0 20 0.05 1 0 0 0 1 0 0 0 0
.....................................................................................................................................ATCCCCCTCCCATAATTATGAAGGT............................................................................................. 25 1 20 0.05 1 0 0 0 1 0 0 0 0
...................................................................................................................................CTATCCCCCTCCCATAATTCTGATGAT............................................................................................. 27 2 20 0.05 1 0 0 0 1 0 0 0 0
..............................................................TAGGGGAATACCCTAATCTATTCATGA.................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................AGAATGAGCGTGGCGAGTTCG.......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................AAGAATGAGCGTGGCGAGTTCG.......................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................AAGAATGAGCGTGGCGAGTTC........................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................GAATACCCTAATCTATTCATGATG................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................CCTCCCATAATTATGAAGATCATT......................................................................................... 24 1 20 0.05 1 0 0 0 1 0 0 0 0
................................................................................................................TGAGCGTGGCGAGTTCGT......................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTGTCCGTAAAAGAGGGATCTTAGAT............................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................TAGGGGAATACCCTAATCTATTCATGAT................................................................................................................................................................. 28 0 20 0.05 1 0 0 0 1 0 0 0 0
.................................................................GGGAATACCCTAATCTAT........................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................TATGAAGATCAATTCTGTCCGTCCAAGA.......................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_666:48016-48266 + dps_2171 CTTGCCGACTT------CGCAAGGGCCCCGTGAGGGGCGCGACCCACGAAACCGTAAGCTACGTATACATCCCCTTATGGGATTAGATAAGTACTACATCCAATGTAAACATCTTCTTACTCGCACCGCTCAAGCAGGATAGGGGGAGGGTATTAATACTTCTAGTTAAGACAGGCAGGTTCTAACCGACAGGCATTTTCTCCCTAGAATCGACAGAAGACATGAAGCGTCTAAGAGATGGAAGGCAAGCTCGGCCG
droPer2 scaffold_892:6569-6819 + CTTGCCGACTT------CGTAAGGGCCCCGTAAGGGGTGCGACCCACGAAACCGTAAGCTACGTATACATCCCCTTATGGGATTAGATAAGTACTACATCCAATGTAAACATCTTCTTACTCGCACCGCTCAAGCAGGATAGGGGGAGGGTATTAATACTTCTAGTTAAGACAGGCAGGTTCTAACCGACAGGCATTTTCTCCCTAGAATCGACAGCAGACATGAAGCGTCTAAGAGATGGAAGGCAAGCTCGGCCC
droVir3 scaffold_12958:408686-408733 + TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAGAAGACCTCACGCGTCAGGGAACGGGAGCGCCTGTTCGGCGA
droKik1 scf7180000302655:11199-11206 - CCTGGCGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000488292:66921-66941 + CTACCCGAAAT------CGCAATGGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000763625:1010-1034 + TTCGCCTGCTTTTATTACGCAAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000300133:5210-5225 + CG-----GCTT------TACAAGGCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTTGCCGACTT------CGCAAGGGCCCCGTGAGGGGCGCGACCCACGAAACCGTAAGCTACGTATACATCCCCTTATGGGATTAGATAAGTACTACATCCAATGTAAACATCTTCTTACTCGCACCGCTCAAGCAGGATAGGGGGAGGGTATTAATACTTCTAGTTAAGACAGGCAGGTTCTAACCGACAGGCATTTTCTCCCTAGAATCGACAGAAGACATGAAGCGTCTAAGAGATGGAAGGCAAGCTCGGCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAG..............................2461.83110400000250
...........................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAGC.............................2561.1770200000140
............................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAG..............................2361.1770000000700
...........................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAGCG............................2661.0060000000330
.........................................................................................................................................................................................................CCCTAGAATCGACAGAAGACATGAA...............................2560.8350000000500
..........................................................................................................................................................AATACTTCTAGTTAAGACAGGCA................................................................................23200.801601100000410
..........................................................................................................................................................AATACTTCTAGTTAAGACAGGCAG...............................................................................24200.701401110101000
..........................................................................................................................................................AATACTTCTAGTTAAGACAGGC.................................................................................22200.3570300000220
............................................................................................................................................................................................................TAGAATCGACAGAAGACATGAA...............................2260.3320000000200
..............................................................................................................................................................................................................GAATCGACAGAAGACATGAAGCG............................2360.3320000000200
............................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAGC.............................2460.3320000000020
............................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAGCG............................2560.3320000000200
............................................................................................................................................................................................................TAGAATCGACAGAAGACATGAAGCGTC..........................2760.3320000000200
..........................................................................................................................................................AATACTTCTAGTTAAGACAGGCAGGT.............................................................................26200.3060600000000
...........................................................................................................................................................ATACTTCTAGTTAAGACAGGCAG...............................................................................23200.2550500000000
......................................................................................................................................................................................................TCTCCCTAGAATCGACAGAAGACA...................................2460.1710000000010
.............................................................................................................................................................................................................AGAATCGACAGAAGACATGAAG..............................2260.1710100000000
.............................................................................................................................................................................................................AGAATCGACAGAAGACATGAAGCGTCTA........................2860.1710000000100
...........................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAAGCGT...........................2760.1710100000000
...........................................................................................................................................................................................................CTAGAATCGACAGAAGACATGAA...............................2360.1710000000010
.......................................................................................................................................................................................................CTCCCTAGAATCGACAGAAGACATG.................................2560.1710000000010
...........................................................................................................................................................................................................CTAGAATCGACAGAAGACATGA................................2260.1710100000000
.......................................................................................................................................................................................................CTCCCTAGAATCGACAGAAGACA...................................2360.1710000000010
...............................................................................................................TCTTCTTACTCGCACCGCTCAAGCAGGA......................................................................................................................28130.1520200000000
..............................................................................................................................................................CTTCTAGTTAAGACAGGCAGG..............................................................................21200.1530200001000
..........................................................................................................................................................AATACTTCTAGTTAAGACAGG..................................................................................21200.1530300000000
......................................................................................ATAAGTACTACATCCAATGT.......................................................................................................................................................20160.1320200000000
.....................................................................................................................................................................................CTAACCGACAGGCATTTTCTCCCTA...................................................25200.1020200000000
......................................................TAAGCTACGTATACATCCCCTTATGG.................................................................................................................................................................................26100.1010100000000
.........................................................GCTACGTATACATCCCCTTATGG.................................................................................................................................................................................23100.1010100000000
..................................................................................................................TCTTACTCGCACCGCTCAAGCAGGA......................................................................................................................25200.1020200000000
.....................................................................................................................TACTCGCACCGCTCAAGCAGGATA....................................................................................................................24200.1020200000000
..................................................................................................TCCAATGTAAACATCTTCTTACTCGCAC...................................................................................................................................28100.1010001000000
......................................................TAAGCTACGTATACATCCCCTTA....................................................................................................................................................................................23100.1010100000000
..............................................................................................................................CGCTCAAGCAGGATAGGGGG...............................................................................................................20200.1020100000010
......................................................................................................ATGTAAACATCTTCTTACTCGCACCGC................................................................................................................................27130.0810000000100
......................................................................................................ATGTAAACATCTTCTTACTCGCA....................................................................................................................................23150.0710100000000
......................................................................................ATAAGTACTACATCCAATGTAAA....................................................................................................................................................23160.0610100000000
......................................................................................ATAAGTACTACATCCAATGTAAAC...................................................................................................................................................24160.0610100000000
..............................................................................................................................CGCTCAAGCAGGATAGGGGGA..............................................................................................................21200.0510100000000
...............................................................................................................................................................TTCTAGTTAAGACAGGCAGG..............................................................................20200.0510100000000
..........................................................................................................................GCACCGCTCAAGCAGGATAGGGGG...............................................................................................................24200.0510100000000
..............................................................................................................................................................CTTCTAGTTAAGACAGGCAGGT.............................................................................22200.0510100000000
.............................................................................................................................................................ACTTCTAGTTAAGACAGGCA................................................................................20200.0510100000000
........................................................................................................................................................................................................................................AAGAGATGGAAGGCAAGC.......18200.0510100000000
............................................................................................................................................................................................................................................GATGGAAGGCAAGCTCGGC..19200.0510100000000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGGC..24200.0510000001000
....................................................................................................................................................................................TCTAACCGACAGGCATTTTCTCC......................................................23200.0510000000010
.....................................................................................................................TACTCGCACCGCTCAAGCAGGAT.....................................................................................................................23200.0510100000000
....................................................................................................................................................................................TCTAACCGACAGGCATTTTCTCCCTAGA.................................................28200.0510100000000
.............................................................................................................................................................................................................................................ATGGAAGGCAAGCTCGGC..18200.0510100000000
......................................................................................................................................................................TAAGACAGGCAGGTTCTAACCGACA..................................................................25200.0510100000000
...........................................................................................................................................................ATACTTCTAGTTAAGACAGGCAGG..............................................................................24200.0510100000000
.....................................................................................................................................................................................CTAACCGACAGGCATTTTCTCC......................................................22200.0510100000000
..............................................................................................................................................................................................................................................TGGAAGGCAAGCTCGGCC.18200.0510100000000
.....................................................................................................................TACTCGCACCGCTCAAGCAGGATAGG..................................................................................................................26200.0510100000000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCT......20200.0510000001000
...............................................................................................................................................................................................................................GAAGCGTCTAAGAGATGGAAGGCAAGC.......27200.0510100000000
.........................................................................................................................................................................GACAGGCAGGTTCTAACCGACAGGCA..............................................................26200.0510100000000
......................................................................................................................................................................................TAACCGACAGGCATTTTCTCCCTAGAA................................................27200.0510100000000
........................................................................................................................TCGCACCGCTCAAGCAGGATAGG..................................................................................................................23200.0510100000000
..............................................................................................................................CGCTCAAGCAGGATAGGG.................................................................................................................18200.0510100000000
.........................................................................................................................CGCACCGCTCAAGCAGGATAGGG.................................................................................................................23200.0510100000000
..................................................................................................................................................................................................ATTTTCTCCCTAGAATCGACA..........................................21200.0510100000000
........................................................................................................................................................................................................................................AAGAGATGGAAGGCAAGCTCGGCC.24200.0510100000000
.......................................................................................................................................................ATTAATACTTCTAGTTAAGACAGGCAG...............................................................................27200.0510000000010
....................................................................................................................TTACTCGCACCGCTCAAGCAGGA......................................................................................................................23200.0510100000000
....................................................................................................................................................................................TCTAACCGACAGGCATTTTCTCCCTA...................................................26200.0510100000000
.....................................................................................................................TACTCGCACCGCTCAAGCAGG.......................................................................................................................21200.0510100000000
....................................................................................................................TTACTCGCACCGCTCAAGCAGGATAG...................................................................................................................26200.0510100000000
......................................................................................................................................................................................................................................CTAAGAGATGGAAGGCAAGC.......20200.0510000000010
..............................................................................................................................CGCTCAAGCAGGATAGGGG................................................................................................................19200.0510000000010
.................................................................................................................................TCAAGCAGGATAGGGGGAT.............................................................................................................19200.0510100000000
...........................................................................................................................................................ATACTTCTAGTTAAGACAGGCA................................................................................22200.0510100000000
.......................................................................................................................................................................AAGACAGGCAGGTTCTAACCGACA..................................................................24200.0510100000000
.............................................................................................................................CCGCTCAAGCAGGATAGGGGG...............................................................................................................21200.0510100000000
..............................................................................................................................................................CTTCTAGTTAAGACAGGCAGGTT............................................................................23200.0510100000000
....................................................................................................................................................................................TCTAACCGACAGGCATTTTCTC.......................................................22200.0510000000100
.........................................................................................................................................................................................................................................AGAGATGGAAGGCAAGCTCGG...21200.0510100000000
..................................................................................................................................................................TAGTTAAGACAGGCAGGTTCTAAC.......................................................................24200.0510000000100
..............................................................................................................................................................................................................................TGAAGCGTCTAAGAGATGGAAGGCAAG........27200.0510100000000
droPer2
CTTGCCGACTT------CGTAAGGGCCCCGTAAGGGGTGCGACCCACGAAACCGTAAGCTACGTATACATCCCCTTATGGGATTAGATAAGTACTACATCCAATGTAAACATCTTCTTACTCGCACCGCTCAAGCAGGATAGGGGGAGGGTATTAATACTTCTAGTTAAGACAGGCAGGTTCTAACCGACAGGCATTTTCTCCCTAGAATCGACAGCAGACATGAAGCGTCTAAGAGATGGAAGGCAAGCTCGGCCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................CTAGAATCGACAGCAGACATGAAG..............................24101.30130100012
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGGC..24200.204040000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGGCCC26200.153030000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGG...23200.102020000
...........................................................................................................................................................................................................CTAGAATCGACAGCAGACATGAA...............................23100.101010000
...........................................................................................................................................................................................................CTAGAATCGACAGCAGACATGA................................22100.101001000
...........................................................................................................................................................................................................CTAGAATCGACAGCAGACATGAAGCGTC..........................28100.101010000
...........................................................................................................................................................................................................CTAGAATCGACAGCAGACATGAAGC.............................25100.101010000
..................................................................................................TCCAATGTAAACATCTTCTTACTC.......................................................................................................................................24150.071010000
..................................................................................................TCCAATGTAAACATCTTCTTACTCGCAC...................................................................................................................................28150.071010000
.............................................................................................................CATCTTCTTACTCGCACCGCTCAAG...........................................................................................................................25200.051010000
...........................................................................................................................................................................CAGGCAGGTTCTAACCGACAGG................................................................22200.051010000
...........................................CCACGAAACCGTAAGCTACGTATACA............................................................................................................................................................................................26200.051010000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGGG..24200.051001000
............................................................................................................................................................................................................................................GATGGAAGGCAAGCTCGG...18200.051000001
.................................................................................................................................................GAGGGTATTAATACTTCTAGTTAAGA......................................................................................26200.051010000
......................................................................................................................................................................................TAACCGACAGGCATTTTCTC.......................................................20200.051010000
.......................................................AAGCTACGTATACATCCCCTTATG..................................................................................................................................................................................24200.051010000
.................................................................................................................................................GAGGGTATTAATACTTCTAGTTAAG.......................................................................................25200.051010000
........................................................AGCTACGTATACATCCCCTTATGG.................................................................................................................................................................................24200.051010000
...................................................................................................CCAATGTAAACATCTTCTTACTCG......................................................................................................................................24200.051010000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCT......20200.051010000
.......................................................................................................................................................................................................................................TAAGAGATGGAAGGCAAGCTCGGCC.25200.051000001
.........................................................................................................................................................................................................................................AGAGATGGAAGGCAAGCTCGGC..22200.051010000
droVir3
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAGAAGACCTCACGCGTCAGGGAACGGGAGCGCCTGTTCGGCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................GCGTCAGGGAACGGGAGC.............1811.001001000000000000000000000000000000000000000000000000000000000000
droKik1
CCTGGCGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTACCCGAAAT------CGCAATGGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTCGCCTGCTTTTATTACGCAAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CG-----GCTT------TACAAGGCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 03:25 AM