ID:

dps_2124

 Coordinate:

Unknown_group_621:11503-11580 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.6 -4.6

Flybase annnotation

CDS [Dpse\GA27848-cds]; exon [dpse_GLEANR_7027:5]; CDS [Dpse\GA27848-cds]; exon [dpse_GLEANR_7027:4]; intron [Dpse\GA27848-in]

No Repeatable elements found

mature
  1. Unknown_group_524:439-459 +
  2. dps_2053  Unknown_group_524:3325-3345 -
  3. dps_2059  Unknown_group_524:6751-6771 +
  4. dps_2124  Unknown_group_621:11514-11534 +
  5. dps_2126  Unknown_group_621:13173-13193 -
  6. dps_2133  Unknown_group_621:16364-16384 +
  7. Unknown_group_621:22978-22998 -
  8. dps_2144  Unknown_group_621:26373-26393 +
  9. Unknown_group_621:28184-28204 -
  10. dps_2149  Unknown_group_621:31610-31630 +
  11. dps_2151  Unknown_group_621:33426-33446 -
  12. Unknown_group_621:37013-37033 +
  13. Unknown_singleton_1609:396-416 +
star
  1. dps_2619  XL_group1e:1164307-1164327 +
  2. Unknown_group_524:464-484 +
  3. dps_2053  Unknown_group_524:3300-3320 -
  4. dps_2059  Unknown_group_524:6776-6796 +
  5. dps_2121  Unknown_group_621:9246-9266 +
  6. dps_2124  Unknown_group_621:11539-11559 +
  7. dps_2126  Unknown_group_621:13148-13168 -
  8. dps_2133  Unknown_group_621:16389-16409 +
  9. Unknown_group_621:22953-22973 -
  10. dps_2144  Unknown_group_621:26398-26418 +
  11. dps_2151  Unknown_group_621:33401-33421 -
  12. Unknown_group_621:37038-37058 +
  13. Unknown_singleton_1609:421-441 +

Sense Strand Reads

##################################################------------------------------------------------------------------------------##################################################
ACAACGACGAGGCCGAGCCGGAGCTAATGCTTACCCCGCAAACAATGCCAGTAAGTGAGAACAACTCATATCCAATCGGGATCAAATCGAATTGTAATCCCCCTCTCCCTCTCTTCCTTCCCGCACAGGAGCTAACGACGGCCATTATTAAGGACACGGGGCCCGGCTGCGTGCCGCG
*************************************************************................((((((((......)))..)))))......*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 GSM444067
head
 SRR902012
CNS imaginal disc
 M022
male body		 M062
head
 M059
embryo
 GSM343916
embryo
 SRR902010
ovaries
..............................................................................................................................................CATTATTAAGGACACGGGGC................ 20 0 11 32.00 352 345 3 1 0 2 0 1 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGG................. 19 0 11 24.00 264 251 11 0 1 1 0 0 0 0 0
......................................................................................................................................................AGGACACGGGGCCCGGCTGCG....... 21 0 10 23.60 236 230 1 1 1 1 0 1 1 0 0
..............................................................................................................................................CATTATTAAGGACACGGGGCC............... 21 0 11 13.91 153 110 29 3 1 2 6 2 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGGGC................ 19 0 11 9.00 99 98 0 1 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGGG................. 18 0 11 7.18 79 78 0 0 0 1 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGG.................. 18 0 11 5.00 55 55 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CGGCCATTATTAAGGACACGG................... 21 0 11 4.55 50 48 0 2 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGGGCC............... 20 0 11 3.82 42 34 4 2 1 0 1 0 0 0 0
...ACGACGAGGCCGAGCCGGAGC.......................................................................................................................................................... 21 0 15 3.67 55 5 47 0 1 0 0 2 0 0 0
..................................................................................................................................................ATTAAGGACACGGGGCCCGGC........... 21 0 10 3.20 32 27 2 1 1 1 0 0 0 0 0
.................................................................................................................................................TATTAAGGACACGGGGCCCGG............ 21 0 10 2.50 25 21 2 1 1 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGG............................................................................................................................................................. 21 0 17 2.24 38 5 20 9 3 0 0 0 1 0 0
.............................................................................................................................................CCATTATTAAGGACACGGGG................. 20 0 11 2.09 23 19 2 2 0 0 0 0 0 0 0
.........................................................................................................................CGCACAGGAGCTAACGACGGC.................................... 21 0 14 2.07 29 24 4 0 1 0 0 0 0 0 0
.CAACGACGAGGCCGAGCCGG............................................................................................................................................................. 20 0 17 2.06 35 6 25 2 1 0 0 1 0 0 0
......................................................................................................................................................AGGACACGGGGCCCGGCTGC........ 20 0 10 2.00 20 17 2 1 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGGGCCC.............. 21 0 11 2.00 22 7 10 0 0 2 3 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTGCG....... 22 0 10 2.00 20 19 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTG......... 20 0 10 2.00 20 11 5 3 0 0 0 1 0 0 0
.............................................................................................................................................CCATTATTAAGGACACGGG.................. 19 0 11 1.91 21 19 0 1 1 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGGT................ 20 1 11 1.82 20 16 4 0 0 0 0 0 0 0 0
.CAACGACGAGGCCGAGCCGGA............................................................................................................................................................ 21 0 16 1.81 29 4 17 2 2 1 0 0 0 0 3
.....................................................................................................................................................AAGGACACGGGGCCCGGCTGC........ 21 0 10 1.80 18 15 0 0 0 0 1 2 0 0 0
...ACGACGAGGCCGAGCCGGAG........................................................................................................................................................... 20 0 15 1.73 26 3 19 3 1 0 0 0 0 0 0
.............................................................CAACTCATATCCAATCGGGAT................................................................................................ 21 0 13 1.69 22 0 17 1 2 0 0 1 0 1 0
.............................................................................................................................................CCATTATTAAGGACACGGGGC................ 21 0 11 1.64 18 18 0 0 0 0 0 0 0 0 0
............................................................................................................................................GCCATTATTAAGGACACGGG.................. 20 0 11 1.64 18 13 0 4 1 0 0 0 0 0 0
...................................................................................................................................................TTAAGGACACGGGGCCCGGC........... 20 0 10 1.50 15 8 6 0 0 0 1 0 0 0 0
...........................................................................................................................CACAGGAGCTAACGACGGCC................................... 20 0 14 1.50 21 11 6 0 0 0 2 2 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTG......... 21 0 10 1.50 15 11 4 0 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTAACGACGGC.................................... 19 0 14 1.50 21 14 5 0 1 0 0 1 0 0 0
..................................................................................CAAATCGAATTGTAATCCCCC........................................................................... 21 0 15 1.47 22 20 1 0 0 0 0 1 0 0 0
....CGACGAGGCCGAGCCGGAGC.......................................................................................................................................................... 20 0 16 1.44 23 0 14 3 4 0 0 2 0 0 0
..AACGACGAGGCCGAGCCGGA............................................................................................................................................................ 20 0 16 1.44 23 2 17 2 1 0 0 1 0 0 0
................................................................................ATCAAATCGAATTGTAATCCC............................................................................. 21 0 15 1.40 21 17 0 0 0 0 1 2 1 0 0
....................................................................................AATCGAATTGTAATCCCCCTC......................................................................... 21 0 13 1.38 18 15 0 0 0 2 0 1 0 0 0
.....GACGAGGCCGAGCCGGAGCT......................................................................................................................................................... 20 0 16 1.38 22 0 21 0 1 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGGAGC.......................................................................................................................................................... 24 0 15 1.33 20 0 0 17 0 0 0 0 1 2 0
..........................................GAATGCCGGTAAGTGAGAGC.................................................................................................................... 20 3 6 1.33 8 0 0 0 0 7 0 0 1 0 0
............................................................................................................................................GCCATTATTAAGGACACGGGG................. 21 0 11 1.27 14 11 0 2 0 0 0 1 0 0 0
...........................................................AAGAACTCATATCCAATCGGG.................................................................................................. 21 1 13 1.15 15 15 0 0 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTAACGACGGCCA.................................. 21 0 14 1.14 16 2 11 0 0 0 0 0 1 2 0
ACAACGACGAGGCCGAGCCGGAG........................................................................................................................................................... 23 0 15 1.13 17 0 0 17 0 0 0 0 0 0 0
.................................................................................................................................................TATTAAGGACACGGGGCCCG............. 20 0 10 1.10 11 7 2 1 0 0 1 0 0 0 0
..................................................................................................................................................ATTAAGGACACGGGGCCCGG............ 20 0 10 1.10 11 8 1 1 1 0 0 0 0 0 0
................................................................................................................................................TTATTAAGGACACGGGGCCC.............. 20 0 11 1.09 12 2 9 1 0 0 0 0 0 0 0
............................................ATGCCGGTAAGTGAGAGC.................................................................................................................... 18 2 2 1.00 2 0 0 0 0 2 0 0 0 0 0
.............CGAGCCGGAGCTAATGCTTAC................................................................................................................................................ 21 0 16 1.00 16 1 13 0 1 0 1 0 0 0 0
...................................................................................................................................CTAACGACGGCCATTATTAAG.......................... 21 0 13 1.00 13 13 0 0 0 0 0 0 0 0 0
...........................................AATGCCGGTAAGTGAGAGC.................................................................................................................... 19 2 2 1.00 2 0 0 0 0 2 0 0 0 0 0
..AACGACGAGGCCGAGCCGGAG........................................................................................................................................................... 21 0 15 1.00 15 5 9 1 0 0 0 0 0 0 0
...ACGACGAGGCCGAGCCGGA............................................................................................................................................................ 19 0 16 0.94 15 0 12 2 1 0 0 0 0 0 0
....CGACGAGGCCGAGCCGGAGT.......................................................................................................................................................... 20 1 16 0.94 15 0 14 1 0 0 0 0 0 0 0
.........................................................................................................................CGCACAGGAGCTAACGACGG..................................... 20 0 15 0.93 14 8 5 1 0 0 0 0 0 0 0
..........................................................GAACAACTCATATCCAATCGG................................................................................................... 21 0 13 0.92 12 11 0 1 0 0 0 0 0 0 0
............................................................ACAACTCATATCCAATCGGGA................................................................................................. 21 0 13 0.92 12 0 7 2 1 0 0 0 1 1 0
................................................................................................................................................TTATTAAGGACACGGGGCC............... 19 0 11 0.91 10 10 0 0 0 0 0 0 0 0 0
............................................................................CGGGATCAAATCGAATTGTAA................................................................................. 21 0 15 0.87 13 13 0 0 0 0 0 0 0 0 0
......................................................................................TCGAATTGTAATCCCCCTCTC....................................................................... 21 0 13 0.85 11 9 0 0 0 0 0 2 0 0 0
................................................................................................................................................TTATTAAGGACACGGGGC................ 18 0 11 0.82 9 9 0 0 0 0 0 0 0 0 0
.......CGAGGCCGAGCCGGAGCTAAT...................................................................................................................................................... 21 0 16 0.81 13 2 10 0 1 0 0 0 0 0 0
................................................................................................................................................TTATTAAGGACACGGGGCCCG............. 21 0 10 0.80 8 6 1 1 0 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTT......... 21 1 10 0.80 8 8 0 0 0 0 0 0 0 0 0
..........................................................GAAGAACTCATATCCAATCGG................................................................................................... 21 1 13 0.77 10 10 0 0 0 0 0 0 0 0 0
....................................................................................................................................TAACGACGGCCATTATTAAGG......................... 21 0 13 0.77 10 7 0 3 0 0 0 0 0 0 0
.........................................................AGAACAACTCATATCCAATCGG................................................................................................... 22 0 13 0.77 10 9 0 1 0 0 0 0 0 0 0
.....GACGAGGCCGAGCCGGAGC.......................................................................................................................................................... 19 0 16 0.75 12 0 7 1 2 0 0 1 0 1 0
.................CCGGAGCTAATGCTTACCCCG............................................................................................................................................ 21 0 16 0.75 12 1 7 4 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTAACGACGG..................................... 18 0 15 0.73 11 10 0 0 1 0 0 0 0 0 0
................................................................................ATCAAATCGAATTGTAATCC.............................................................................. 20 0 15 0.73 11 11 0 0 0 0 0 0 0 0 0
..............................................................................................................CTCTTCCTTCCCGCACAGGAG............................................... 21 0 14 0.71 10 1 2 2 2 1 0 0 1 1 0
......................................................................................................................................................AGGACACGGGGCCCGGCTGT........ 20 1 10 0.70 7 3 4 0 0 0 0 0 0 0 0
..................................................................................CAAATCGAATTGTAATCCCC............................................................................ 20 0 15 0.67 10 8 0 1 1 0 0 0 0 0 0
...........................................................................TCGGGATCAAATCGAATTGTA.................................................................................. 21 0 15 0.67 10 10 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGACGGCCATTATTAAGGAC....................... 20 0 12 0.67 8 3 0 1 0 0 4 0 0 0 0
..............................................................................................................................................CATTATTGGGGACACGGGGCC............... 21 2 11 0.64 7 2 2 0 2 0 0 0 0 1 0
.........................................................................................................................................ACGGCCATTATTAAGGACACG.................... 21 0 11 0.64 7 1 2 0 0 0 4 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGCGCC............... 21 1 11 0.64 7 4 1 0 0 0 1 0 1 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTCC........ 21 1 10 0.60 6 6 0 0 0 0 0 0 0 0 0
.................................................................................TCAAATCGAATTGTAATCCC............................................................................. 20 0 15 0.60 9 7 0 0 0 0 2 0 0 0 0
.........................................................................................................................CGCACAGGAGCTGGCGACGGC.................................... 21 2 15 0.60 9 0 4 3 0 1 0 1 0 0 0
.................................................................................................................................................TATTAAGGACACGGCGCCCGG............ 21 1 10 0.60 6 5 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTTC........ 22 1 10 0.60 6 6 0 0 0 0 0 0 0 0 0
..AACGACGAGGCCGAGCCGG............................................................................................................................................................. 19 0 17 0.59 10 0 3 3 4 0 0 0 0 0 0
.......................................................................................................TCTCCCTCTCTTCCTTCCCGC...................................................... 21 0 12 0.58 7 2 0 2 0 0 0 2 1 0 0
...............................................................................................................TCTTCCTTCCCGCACAGGAGC.............................................. 21 0 14 0.57 8 0 3 2 0 0 0 3 0 0 0
......ACGAGGCCGAGCCGGAGCTAA....................................................................................................................................................... 21 0 16 0.56 9 4 4 1 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGCGC................ 20 1 11 0.55 6 6 0 0 0 0 0 0 0 0 0
..................................................................................CAAATCGAATTGTAATCCC............................................................................. 19 0 15 0.53 8 8 0 0 0 0 0 0 0 0 0
.CAACGACGAGGCCGAGCCGGAG........................................................................................................................................................... 22 0 15 0.53 8 0 0 7 0 0 0 0 0 0 1
ACAACGACGAGGCCGAGCC............................................................................................................................................................... 19 0 17 0.53 9 1 7 0 1 0 0 0 0 0 0
...........GCCGAGCCGGAGCTAATGCTT.................................................................................................................................................. 21 0 16 0.50 8 0 7 0 1 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTCC........ 22 1 10 0.50 5 5 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AGGACACGGGGCCCGGCTG......... 19 0 10 0.50 5 4 1 0 0 0 0 0 0 0 0
..............................................................................................................................AGGAGCTAACGACGGCCATTA............................... 21 0 14 0.50 7 5 0 1 1 0 0 0 0 0 0
................................................................................................................CTTCCTTCCCGCACAGGAGCT............................................. 21 0 14 0.50 7 1 5 0 0 0 0 0 0 1 0
........................................................................................................................CCGCACAGGAGCTAACGACGGC.................................... 22 0 14 0.50 7 7 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTTC........ 21 1 10 0.50 5 5 0 0 0 0 0 0 0 0 0
......................................................................................................................TCCCGCACAGGAGCTAACGACG...................................... 22 0 14 0.50 7 0 6 1 0 0 0 0 0 0 0
.............................................................................GGGATCAAATCGAATTGTAAT................................................................................ 21 0 15 0.47 7 7 0 0 0 0 0 0 0 0 0
........................................................................................................................CCGCACAGGAGCTAACGACGG..................................... 21 0 15 0.47 7 2 5 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGCG................. 19 1 11 0.45 5 5 0 0 0 0 0 0 0 0 0
............................................................................................................................................GCCATTATTAAGGACACGG................... 19 0 11 0.45 5 1 0 1 2 0 0 0 0 1 0
..............................................................................................................................................CATTATTAAGGACACGGGGTC............... 21 1 11 0.45 5 1 4 0 0 0 0 0 0 0 0
.................................................................................................................................................TATTAAGGACACGGGGCCC.............. 19 0 11 0.45 5 1 1 0 0 0 3 0 0 0 0
.....GACGAGGCCGAGCCGGAGCTA........................................................................................................................................................ 21 0 16 0.44 7 0 5 1 1 0 0 0 0 0 0
............................................................................................................................ACAGGAGCTAACGACGGCCA.................................. 20 0 14 0.43 6 1 4 0 0 1 0 0 0 0 0
..............................TTACCCCGCAAACAATGCCAG............................................................................................................................... 21 0 19 0.42 8 2 0 6 0 0 0 0 0 0 0
.................................................................................TCAAATCGAATTGTAATCCCC............................................................................ 21 0 15 0.40 6 4 0 1 0 0 0 1 0 0 0
.CAACGACGAGGCCGAGCCGGAGC.......................................................................................................................................................... 23 0 15 0.40 6 0 1 4 0 0 0 0 1 0 0
............................................................................CGGGATCAAATCGAATTGTA.................................................................................. 20 0 15 0.40 6 4 2 0 0 0 0 0 0 0 0
............................................................AGAACTCATATCCAATCGG................................................................................................... 19 1 13 0.38 5 4 0 1 0 0 0 0 0 0 0
...................................................................................AAATCGAATTGTAATCCCCCT.......................................................................... 21 0 13 0.38 5 3 1 1 0 0 0 0 0 0 0
........................................................................................GAATTGTAATCCCCCTCTCC...................................................................... 20 0 13 0.38 5 0 0 2 0 0 0 3 0 0 0
....................................................................................................................................TAACGACGGCCATTATTAAG.......................... 20 0 13 0.38 5 5 0 0 0 0 0 0 0 0 0
...........................................................AAGAACTCATATCCAATCGG................................................................................................... 20 1 13 0.38 5 5 0 0 0 0 0 0 0 0 0
...ACGACGAGGCCGAGCCGGAC........................................................................................................................................................... 20 1 16 0.38 6 0 5 0 0 0 1 0 0 0 0
ACAACGACGAGGCCGAGCCGGA............................................................................................................................................................ 22 0 16 0.38 6 0 0 6 0 0 0 0 0 0 0
.CAGCGACGAGGCCGAGCCGGA............................................................................................................................................................ 21 1 16 0.38 6 0 2 1 1 1 0 0 0 1 0
.............CGAGCCGGAGCTAATGCTTA................................................................................................................................................. 20 0 16 0.38 6 1 5 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGGCT............... 21 1 11 0.36 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTGTTAAGGACACGGGGCC............... 21 1 11 0.36 4 1 3 0 0 0 0 0 0 0 0
.......................................................................................................................................CGACGGCCATTATTAAGGACACGG................... 24 0 11 0.36 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGGA................ 20 1 11 0.36 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGGCCC.............. 22 0 11 0.36 4 4 0 0 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTAACAACGGCCA.................................. 21 1 14 0.36 5 0 3 1 1 0 0 0 0 0 0
...ACGACGAGGCCGAGCCGGAGT.......................................................................................................................................................... 21 1 15 0.33 5 0 5 0 0 0 0 0 0 0 0
...ACGACGGGGCCGAGCCGGAGC.......................................................................................................................................................... 21 1 15 0.33 5 0 3 0 2 0 0 0 0 0 0
.......................................................................................................................................CAACGGCCATTATTAAGGAC....................... 20 1 12 0.33 4 1 0 1 0 0 2 0 0 0 0
...................................................................................AAATCGAATTGTAATCCCCC........................................................................... 20 0 15 0.33 5 4 0 0 0 0 1 0 0 0 0
.........AGGCCGAGCCGGAGCTAATGC.................................................................................................................................................... 21 0 16 0.31 5 1 3 0 1 0 0 0 0 0 0
............................................................AGAACTCATATCCAATCGGG.................................................................................................. 20 1 13 0.31 4 3 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................GGACACGGGGCCCGGCTGCG....... 20 0 13 0.31 4 0 0 4 0 0 0 0 0 0 0
.......................................................................................CGAATTGTAATCCCCCTCTC....................................................................... 20 0 13 0.31 4 3 0 0 0 0 1 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTGCG....... 23 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTT......... 20 1 10 0.30 3 1 1 1 0 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTGT........ 22 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTGT........ 21 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGC........... 19 0 10 0.30 3 0 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTGCC....... 22 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTAACGACGGCCATTATTAA........................... 20 0 17 0.29 5 4 0 1 0 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGT............................................................................................................................................................. 21 1 17 0.29 5 0 4 1 0 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCG.............................................................................................................................................................. 20 0 17 0.29 5 1 4 0 0 0 0 0 0 0 0
............................................................................................................................ACAGGAGCTAACGACGGCCAT................................. 21 0 14 0.29 4 3 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................GGACACGGGGCCCGGCTACG....... 20 1 14 0.29 4 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTAGCGACGGCC................................... 20 1 14 0.29 4 0 3 0 0 0 1 0 0 0 0
.....................................................................................................................................................GGGGACACGGGGCCCGGCTGC........ 21 2 14 0.29 4 2 0 0 1 1 0 0 0 0 0
.........................................................AGAAGAACTCATATCCAATCG.................................................................................................... 21 1 14 0.29 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAGGGACACGGGGCC............... 21 1 11 0.27 3 1 2 0 0 0 0 0 0 0 0
................................................................................................................................................TTATTAAGGACACGGGG................. 17 0 11 0.27 3 3 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ACGGCCATTATTAAGGACACGG................... 22 0 11 0.27 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGGCA............... 21 1 11 0.27 3 2 0 1 0 0 0 0 0 0 0
.................................................................................TCAAATCGAATTGTAATCC.............................................................................. 19 0 15 0.27 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................CCCGCACAGGAGCTAACGACGG..................................... 22 0 15 0.27 4 3 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................GGGGACACGGGGCCCGGCTG......... 20 2 15 0.27 4 0 2 1 1 0 0 0 0 0 0
............................................................................CGGGATCAAATCGAATTGTAAT................................................................................ 22 0 15 0.27 4 4 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGCACAGGAGCTGACGACGG..................................... 20 1 15 0.27 4 2 1 1 0 0 0 0 0 0 0
..AACGACGAGGCCGAGCCGGAGC.......................................................................................................................................................... 22 0 15 0.27 4 0 2 1 0 0 0 0 1 0 0
............CCGAGCCGGAGCTAATGCTTA................................................................................................................................................. 21 0 16 0.25 4 0 4 0 0 0 0 0 0 0 0
.............CGAGCCGGAGCTAGTGCTTAC................................................................................................................................................ 21 1 16 0.25 4 0 3 1 0 0 0 0 0 0 0
......ACGAGGCCGAGCCGGAGCTA........................................................................................................................................................ 20 0 16 0.25 4 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTGGCGACGGCC................................... 20 2 16 0.25 4 0 1 2 0 0 1 0 0 0 0
.........AGGCCGAGCCGGAGCTAATG..................................................................................................................................................... 20 0 16 0.25 4 0 3 0 1 0 0 0 0 0 0
......................................................................................................................................ACGACGGCCATTATTAAGGAC....................... 21 0 12 0.25 3 1 0 1 0 0 1 0 0 0 0
....CGACGAGGCCGAGCCGGAGCT......................................................................................................................................................... 21 0 16 0.25 4 0 3 1 0 0 0 0 0 0 0
.......................................................................................................TCTCCCTCTCTTCCTTCCCG....................................................... 20 0 12 0.25 3 0 0 2 1 0 0 0 0 0 0
...............................................................................................................................................ATTGTTGGGGACACGGGGCC............... 20 3 17 0.24 4 1 3 0 0 0 0 0 0 0 0
..................CGGAGCTAATGCTTACCCCGC........................................................................................................................................... 21 0 17 0.24 4 0 2 0 1 0 0 0 1 0 0
...ACGACGAGGCCGAGCCGG............................................................................................................................................................. 18 0 17 0.24 4 0 0 4 0 0 0 0 0 0 0
.....................................................................................ATCGAATTGTAATCCCCCTC......................................................................... 20 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................ATCGAATTGTAATCCCCCTCTCC...................................................................... 23 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
...........................................................AACAACTCATATCCAATCGGG.................................................................................................. 21 0 13 0.23 3 0 0 1 0 0 0 0 1 1 0
..........................................................................................ATTGTAATCCCCCTCTCCCTC................................................................... 21 0 13 0.23 3 0 0 2 0 0 0 1 0 0 0
............................................................ACAACTCATATCCAATCGG................................................................................................... 19 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
............................................................AGAACTCATATCCAATCGGGA................................................................................................. 21 1 13 0.23 3 1 0 0 0 0 2 0 0 0 0
....................................................................................................................CTTCCCGCACAGGAGCTAACG......................................... 21 0 14 0.21 3 0 1 2 0 0 0 0 0 0 0
...........................................................................................................................CACAGGAGCTGGCGACGGCCA.................................. 21 2 14 0.21 3 0 2 0 0 0 0 0 0 1 0
.................................................................................................................TTCCTTCCCGCACAGGAGCTA............................................ 21 0 14 0.21 3 0 3 0 0 0 0 0 0 0 0
..................................................................................................................TCCTTCCCGCACAGGAGCTAA........................................... 21 0 14 0.21 3 0 3 0 0 0 0 0 0 0 0
...................................................................ATATCCAATCGGGATCAAATC.......................................................................................... 21 0 14 0.21 3 0 3 0 0 0 0 0 0 0 0
.............................................................................................................................CAGGAGCTAACGACGGCCATT................................ 21 0 14 0.21 3 2 1 0 0 0 0 0 0 0 0
............................................................................................................CTCTCTTCCTTCCCGCACAGG................................................. 21 0 14 0.21 3 0 0 3 0 0 0 0 0 0 0
............................................................................................................................ACAGGAGCTAACGACGGCC................................... 19 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................................................CCCGCACAGGAGCTAACGACGGC.................................... 23 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
..........................ATGCTTACCCCGCAAACAATG................................................................................................................................... 21 0 19 0.21 4 2 0 1 0 0 0 1 0 0 0
....................................................................................................................................................TAGGGACACGGGGCCCGGCTGCG....... 23 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGTTAAGGACACGGGGCCCG............. 20 1 10 0.20 2 0 1 0 0 0 0 0 1 0 0
.................................................................................TCGAATCGAATTGTAGTCCCC............................................................................ 21 2 15 0.20 3 2 1 0 0 0 0 0 0 0 0
................................................................................................................................................TTATTAAGGACACGGGGCCCGG............ 22 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCACAGGAGCTAACGACGG..................................... 19 0 15 0.20 3 1 2 0 0 0 0 0 0 0 0
.............................................................................................................................................CCATTATTAAGGACACGGGGCCCGGC........... 26 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTATTAAGGACACGGCGCCCG............. 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TTAAGGACACGGGGCCCGGCT.......... 21 0 10 0.20 2 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCTA......... 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGCACAGGAGCTAGCGACGG..................................... 20 1 15 0.20 3 1 2 0 0 0 0 0 0 0 0
....................................................................................................................................................TAAGGACACGGGGCCCGGCT.......... 20 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
..................................................................................CAAGTCGAATTGTAGTCCCCC........................................................................... 21 2 15 0.20 3 3 0 0 0 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGGAGCTA........................................................................................................................................................ 26 0 15 0.20 3 0 0 3 0 0 0 0 0 0 0
.....................................................................ATCCAATCGGGATCAAATCGA........................................................................................ 21 0 15 0.20 3 0 2 0 0 0 0 1 0 0 0
............................................................................CGGGATCAAATCGAATTGTAAA................................................................................ 22 1 15 0.20 3 3 0 0 0 0 0 0 0 0 0
..AACGACGAGGCCGAGCCGGAGTT......................................................................................................................................................... 23 1 15 0.20 3 0 2 0 1 0 0 0 0 0 0
......................................................................................................................................................AGGACACGGGGCCCGGCTGCC....... 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TATTAAGGACACGGCGCCCG............. 20 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGGACACGGGGCCCGGCTCT........ 21 2 10 0.20 2 2 0 0 0 0 0 0 0 0 0
......................................................................TCCAATCGGGATCAAATCGA........................................................................................ 20 0 15 0.20 3 1 1 0 0 0 0 0 1 0 0
.................................................................................TCAAATCGAATTGTAATCCCCC........................................................................... 22 0 15 0.20 3 3 0 0 0 0 0 0 0 0 0
.CAACGACGAGGCCGAGCCGGAGCTA........................................................................................................................................................ 25 0 15 0.20 3 0 0 3 0 0 0 0 0 0 0
................................................................................................................................................TTATTAAGGACACGGGGCCCGGC........... 23 0 10 0.20 2 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................CCCGCACAGGAGCTAACGAC....................................... 20 0 15 0.20 3 3 0 0 0 0 0 0 0 0 0
................................................................................ATCAAATCGAATTGTAATCCCC............................................................................ 22 0 15 0.20 3 3 0 0 0 0 0 0 0 0 0
.....GACGAGGCCGAGCCGGAGT.......................................................................................................................................................... 19 1 16 0.19 3 0 3 0 0 0 0 0 0 0 0
......ACGAGGCCGAGCCGGAGCTAATG..................................................................................................................................................... 23 0 16 0.19 3 0 2 0 1 0 0 0 0 0 0
.....GACGAGGCCGAGCCGGAG........................................................................................................................................................... 18 0 16 0.19 3 0 3 0 0 0 0 0 0 0 0
.......CGAGGCCGAGCCGGAGCTAA....................................................................................................................................................... 20 0 16 0.19 3 0 3 0 0 0 0 0 0 0 0
................................................................................ATCAAATCGAATTGTAATC............................................................................... 19 0 16 0.19 3 3 0 0 0 0 0 0 0 0 0
.................CCGGAGCTAGTGCTTACCCCG............................................................................................................................................ 21 1 16 0.19 3 0 3 0 0 0 0 0 0 0 0
........GAGGCCGAGCCGGAGCTAATG..................................................................................................................................................... 21 0 16 0.19 3 0 3 0 0 0 0 0 0 0 0
.......CGAGGCCGAGCCGGAGCTA........................................................................................................................................................ 19 0 16 0.19 3 0 2 1 0 0 0 0 0 0 0
.................................................................................................................................................TATTAAGGACACGGGGCC............... 18 0 11 0.18 2 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGCGCCC.............. 21 1 11 0.18 2 0 1 0 1 0 0 0 0 0 0
..........................................................................................................................................CGGCCATTATTAAGGACACGGG.................. 22 0 11 0.18 2 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGCG................. 18 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CCATTATTAAGGACACGGGGT................ 21 1 11 0.18 2 0 1 0 0 0 0 0 0 1 0
........................................................................................................................................GACGGCCATTATTAAGGACAC..................... 21 0 11 0.18 2 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAAGACACGGGGC................ 20 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CCATTATTAGGGACACGGGG................. 20 1 11 0.18 2 0 1 1 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGGGT................ 19 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTATTAAGGACACGGCGCC............... 20 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTAAGGACACGGGAC................ 20 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGGGGACACGGGGCCCGGCTG......... 21 2 11 0.18 2 0 1 1 0 0 0 0 0 0 0
..............................................................................................................................................CATTGTTAGGGACACGGGGCC............... 21 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CGGCCATTGTTGGGGACACGG................... 21 3 11 0.18 2 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................ATTGTTAGGGACACGGGGCC............... 20 2 11 0.18 2 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................GGCCATTATTAAGGACACGGG.................. 21 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CATTATTGAGGACACGGGGCC............... 21 1 11 0.18 2 0 2 0 0 0 0 0 0 0 0
...................................................................................................CCCCTCTCCCTCTCTTCCTTCC......................................................... 22 0 11 0.18 2 0 0 1 0 0 0 1 0 0 0
.......................................................................................................................................CGACGGCCATTATTAAGGACACGGG.................. 25 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.CAACGACGAGGCCGAGCCGGT............................................................................................................................................................ 21 1 17 0.18 3 0 3 0 0 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGGT............................................................................................................................................................ 22 1 17 0.18 3 1 2 0 0 0 0 0 0 0 0
GCAACGACGAGGCCGAGCCG.............................................................................................................................................................. 20 1 17 0.18 3 0 3 0 0 0 0 0 0 0 0
GCAACGACGAGGCCGAGCCGG............................................................................................................................................................. 21 1 17 0.18 3 0 2 1 0 0 0 0 0 0 0
............................................................................................................................................................CGGGGCCCGGCTGCGTGCCGCG 22 0 12 0.17 2 0 0 2 0 0 0 0 0 0 0
......................................................................................................CTCTCCCTCTCTTCCTTCCCGT...................................................... 22 1 12 0.17 2 0 1 0 1 0 0 0 0 0 0
........................TAATGCTTACCCCGCAAACAATGCCA................................................................................................................................ 26 0 19 0.16 3 0 0 3 0 0 0 0 0 0 0
........................TAATGCTTACCCCGCAAACAATGCCAG............................................................................................................................... 27 0 19 0.16 3 0 0 3 0 0 0 0 0 0 0
..........................................................................................................................................................CACGGGGCCCGGCTGCGTGC.... 20 0 13 0.15 2 0 0 1 1 0 0 0 0 0 0
.........................................................................................................................................................ACACGGGGCCCGGCTGCG....... 18 0 13 0.15 2 0 0 1 1 0 0 0 0 0 0
............................................................GCAACTCATATCCAATCGGGA................................................................................................. 21 1 13 0.15 2 0 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................ACACGGGGCCCGGCTGCGTGC.... 21 0 13 0.15 2 0 1 1 0 0 0 0 0 0 0
.........................................................................................AATTGTAATCCCCCTCTCCC..................................................................... 20 0 13 0.15 2 0 0 0 0 0 0 2 0 0 0
......................................................................................TCGAATTGTAATTCCCCTCTC....................................................................... 21 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CACGGGGCCCGGCTGCGTGCC... 21 0 13 0.15 2 1 0 1 0 0 0 0 0 0 0
....................................................................................AATCGAATTGTAATCCCCCT.......................................................................... 20 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
....................................................................................AATCGAATTGTAATCCCCCTCTCCC..................................................................... 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
......................................................................................TCGAATTGTAATCCCCCTCT........................................................................ 20 0 13 0.15 2 1 0 1 0 0 0 0 0 0 0
...................................................................................GAGTCGAATTGTAATCCCCCT.......................................................................... 21 2 13 0.15 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GACACGGGGCCCGGCTGCG....... 19 0 13 0.15 2 1 0 1 0 0 0 0 0 0 0
.......................................................................................CGAATTGTAGTCCCCCTCTC....................................................................... 20 1 13 0.15 2 0 0 1 1 0 0 0 0 0 0
.............................................................CAACTCATATCCAATCGGGATT............................................................................................... 22 1 13 0.15 2 0 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................GGGCCCGGCTGCGTGCCGCG 20 0 13 0.15 2 0 0 2 0 0 0 0 0 0 0
............................................................GGAACTCATATCCAATCGGGA................................................................................................. 21 2 13 0.15 2 0 1 0 0 0 0 0 0 1 0
......................................................................................TCGAATTGTAATCCCCCTCTCTCT.................................................................... 24 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
..........................................................GAGAAACTCATATCCAATCGG................................................................................................... 21 2 13 0.15 2 2 0 0 0 0 0 0 0 0 0
..................................................................................CGAATCGAATTGTAGTCCCCCT.......................................................................... 22 2 13 0.15 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................ATCGAATTGTAGTCCCCCTC......................................................................... 20 1 13 0.15 2 1 0 0 0 0 1 0 0 0 0
....................................................................................AATCGAATTGTAGTCCCCCTC......................................................................... 21 1 13 0.15 2 0 0 1 0 1 0 0 0 0 0
.............................................................CAACTCATATCCAATCGGGA................................................................................................. 20 0 13 0.15 2 0 2 0 0 0 0 0 0 0 0
...........................................................AACAACTCATATCCAATCGG................................................................................................... 20 0 13 0.15 2 1 1 0 0 0 0 0 0 0 0
.....................................................................................ATCGAATTGTAATCCCCCTCTCTTT.................................................................... 25 2 13 0.15 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GGGACACGGGGCCCGGCTGCG....... 21 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
.............................................................CAACTCATATCCAGTCGGGAT................................................................................................ 21 1 13 0.15 2 0 0 0 0 0 0 0 1 1 0
...........................................................AGCAACTCATATCCAATCGGG.................................................................................................. 21 1 13 0.15 2 0 0 1 0 0 0 0 1 0 0
.....................................................................................................................................................GGGGACACGGGGCCCGGCTGCG....... 22 2 13 0.15 2 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................ACACGGGGCCCGGCTGCGT...... 19 0 13 0.15 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................TCTCTTCCTTCCCGCACAG.................................................. 19 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCCCGCACAGGAGCTAGCG......................................... 20 1 14 0.14 2 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................TTCCCGCACAGGAGCTAACGAC....................................... 22 0 14 0.14 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................TGGGGACACGGGGCCCGGCTT......... 21 3 14 0.14 2 0 0 0 0 2 0 0 0 0 0
...........................................................................TCGGGATCAAATCGAATTGTAATCCCCC........................................................................... 28 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGCACAGGAGCTAGCGACGGC.................................... 21 1 14 0.14 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................CACGGGAGCTAGCGACGGCC................................... 20 2 14 0.14 2 1 1 0 0 0 0 0 0 0 0
............................................................................................................................ACAGGAGCTAACGACGGC.................................... 18 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CGGGGCCCGGCTGCGTGTC... 19 1 14 0.14 2 0 2 0 0 0 0 0 0 0 0
......................................................................................................................TCCCGCACAGGAGCTAACGACGG..................................... 23 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCACAGGAGCTAGCGACGGCC................................... 21 1 14 0.14 2 1 0 1 0 0 0 0 0 0 0
............................................................................................................................ACAGGAGCTAACGACGGCCATT................................ 22 0 14 0.14 2 0 2 0 0 0 0 0 0 0 0
.........................................................AGAACAACTCATATCCAATCG.................................................................................................... 21 0 14 0.14 2 1 1 0 0 0 0 0 0 0 0
.....................................................................ATCCAATCGGGATCAAATCG......................................................................................... 20 0 15 0.13 2 0 0 2 0 0 0 0 0 0 0
..............................................................................GGATCAAATCGAATTGTAAT................................................................................ 20 0 15 0.13 2 2 0 0 0 0 0 0 0 0 0
..................................................................................CAAATCGAATTGTAATTCCCC........................................................................... 21 1 15 0.13 2 2 0 0 0 0 0 0 0 0 0
..............................................................AGCTCATATCCGGTCGGGAT................................................................................................ 20 3 15 0.13 2 0 2 0 0 0 0 0 0 0 0
...................................................................................GAATCGAATTGTAATCCCC............................................................................ 19 1 15 0.13 2 2 0 0 0 0 0 0 0 0 0
...ACGACGAGGCCGAGCCGGAGCT......................................................................................................................................................... 22 0 15 0.13 2 0 1 0 1 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGGAGCT......................................................................................................................................................... 25 0 15 0.13 2 0 0 2 0 0 0 0 0 0 0
..........................................................................ATCGGGATCAAATCGAATTGT................................................................................... 21 0 15 0.13 2 2 0 0 0 0 0 0 0 0 0
ACAACGACGAGGCCGAGCCGGAGCTAA....................................................................................................................................................... 27 0 15 0.13 2 0 0 2 0 0 0 0 0 0 0
...ACGACGAGGCCGGGCCGGAGC.......................................................................................................................................................... 21 1 15 0.13 2 0 2 0 0 0 0 0 0 0 0
......................................................................TCCAATCGGGATCAAATCGAATTGTA.................................................................................. 26 0 15 0.13 2 2 0 0 0 0 0 0 0 0 0
..AACGACGAGGCCGAGCCGGAGT.......................................................................................................................................................... 22 1 15 0.13 2 0 1 0 0 0 0 0 0 1 0
..................................................................................CAAATCGAATTGTAGTCCCCC........................................................................... 21 1 15 0.13 2 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TGTTGCTGCTCCGGCTCGGCCTCGATTACGAATGGGGCGTTTGTTACGGTCATTCACTCTTGTTGAGTATAGGTTAGCCCTAGTTTAGCTTAACATTAGGGGGAGAGGGAGAGAAGGAAGGGCGTGTCCTCGATTGCTGCCGGTAATAATTCCTGTGCCCCGGGCCGACGCACGGCGC
***********************************************************************................((((((((......)))..)))))......************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 SRR902011
testis
 M040
female body
 GSM444067
head
 M022
male body		 M062
head
 GSM343916
embryo
 M059
embryo
 SRR902012
CNS imaginal disc
..............CGTGGCCTCGATTACCAAT................................................................................................................................................. 19 3 20 5.40 108 0 0 108 0 0 0 0 0 0
.............GCTCGGCCTCGATTACGAATG................................................................................................................................................ 21 0 16 4.44 71 51 7 5 6 2 0 0 0 0
....................................................................................................................GAAGGGCGTGTCCTCGATTGC......................................... 21 0 14 4.21 59 51 4 1 2 0 0 1 0 0
.....................................................................TCGGTTAGCCCTAGCTTGGC......................................................................................... 20 3 17 4.18 71 1 0 70 0 0 0 0 0 0
..................................................................GTATAGGTTAGCCCTAGTTTA........................................................................................... 21 0 14 3.86 54 7 45 1 1 0 0 0 0 0
.GTTGCTGCTCCGGCTCGGCCT............................................................................................................................................................ 21 0 16 3.31 53 25 15 8 4 0 0 1 0 0
.......................................................................GGTTAGCCCTAGCTTGGCTG....................................................................................... 20 3 16 3.06 49 0 0 49 0 0 0 0 0 0
.....CTGCTCCGGCTCGGCCTCGAT........................................................................................................................................................ 21 0 16 2.88 46 30 2 5 3 0 3 1 2 0
................................................................GAGTATAGGTTAGCCCTAGTT............................................................................................. 21 0 13 2.77 36 4 32 0 0 0 0 0 0 0
..........................................................................................................GGGAGAGAAGGAAGGGCGTGT................................................... 21 0 14 2.71 38 5 31 2 0 0 0 0 0 0
................................................................................................................GAAGGAAGGGCGTGTCCTCGA............................................. 21 0 14 2.57 36 30 1 2 3 0 0 0 0 0
.......GCTCCGGCTCGGCCTCGATTA...................................................................................................................................................... 21 0 16 2.56 41 32 1 5 2 0 0 0 1 0
....................................................................................................................GAAGGGCGTGTCCTCGATTG.......................................... 20 0 14 2.50 35 34 0 1 0 0 0 0 0 0
.........................................................................................................AGGGAGAGAAGGAAGGGCGT..................................................... 20 0 14 2.14 30 19 9 2 0 0 0 0 0 0
.....................................................................................................................................TTGCTGCCGGTAATAATTCCT........................ 21 0 13 2.08 27 17 8 2 0 0 0 0 0 0
............................................................................................................................TGTGCTCGACTGCTGTCGGTA................................. 21 3 20 2.00 40 3 0 37 0 0 0 0 0 0
.............GCTCGGCCTCGATTACGAAT................................................................................................................................................. 20 0 16 1.94 31 15 0 4 6 6 0 0 0 0
........CTCCGGCTCGGCCTCGATTAC..................................................................................................................................................... 21 0 16 1.94 31 15 5 3 2 1 3 1 1 0
.......................................................................................................................................GCTGCCGGTAATAATTCCTGT...................... 21 0 12 1.92 23 5 18 0 0 0 0 0 0 0
............GGCTCGGCCTCGATTACGAAT................................................................................................................................................. 21 0 16 1.88 30 13 5 10 2 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCCCGGGCCGACGC....... 20 0 13 1.85 24 16 0 1 5 0 1 1 0 0
........................................................................................................GAGGGAGAGAAGGAAGGGCGT..................................................... 21 0 14 1.79 25 20 4 0 1 0 0 0 0 0
....................CTCGATTACGAATGGGGCGTT......................................................................................................................................... 21 0 17 1.65 28 11 5 1 3 6 1 1 0 0
..........................................................................................................GGGAGAGAAGGAAGGGCGT..................................................... 19 0 14 1.64 23 11 11 0 0 0 0 1 0 0
.....................................................................................................................AAGGGCGTGTCCTCGATTGCT........................................ 21 0 14 1.57 22 17 1 3 0 0 1 0 0 0
....................................................................ATAGGTTAGCCCTAGTTTAGC......................................................................................... 21 0 15 1.53 23 5 17 0 1 0 0 0 0 0
.....................................................................................................................AAGGGCGTGTCCTCGATTGC......................................... 20 0 14 1.50 21 21 0 0 0 0 0 0 0 0
......................................................................................................................................................TCCTGTGCCCCGGGCCGACGC....... 21 0 10 1.50 15 14 0 0 0 0 0 1 0 0
....................................................................................................GGGAGAGGGAGAGAAGGAAG.......................................................... 20 0 12 1.33 16 2 12 2 0 0 0 0 0 0
...........................ACGAATGGGGCGTTTGTTAC................................................................................................................................... 20 0 19 1.26 24 14 2 6 1 0 1 0 0 0
......................................................CACTCTTGTTGAGTATAGGTT....................................................................................................... 21 0 14 1.21 17 11 3 0 2 0 1 0 0 0
...................................................................................................................GGAAGGGCGTGTCCTCGATTG.......................................... 21 0 14 1.21 17 17 0 0 0 0 0 0 0 0
...............................ATGGGGCGTTTGTTACGGT................................................................................................................................ 19 0 19 1.21 23 21 0 0 2 0 0 0 0 0
......................................................................CGGTTAGCCCTAGCTTGGC......................................................................................... 19 3 20 1.20 24 0 0 22 0 0 2 0 0 0
.......................................................................GGTTAGCCCTAGCTTGGC......................................................................................... 18 2 20 1.15 23 0 0 23 0 0 0 0 0 0
...............................................................................................................................CCTCGATTGCTGCCGGTAATA.............................. 21 0 14 1.14 16 6 4 2 0 4 0 0 0 0
.......................................................ACTCTTGTTGAGTATAGGTTA...................................................................................................... 21 0 14 1.14 16 12 1 0 2 0 1 0 0 0
............................................................................GCCCTAGTTTAGCTTAACATT................................................................................. 21 0 15 1.07 16 6 7 2 1 0 0 0 0 0
.....CTGCTCCGGCTCGGCCTCGGT........................................................................................................................................................ 21 1 16 1.06 17 10 2 1 3 0 0 0 1 0
............GGCTCGGCCTCGATTACGAA.................................................................................................................................................. 20 0 16 1.06 17 5 2 6 2 1 1 0 0 0
......TGCTCCGGCTCGGCCTCGATT....................................................................................................................................................... 21 0 16 1.06 17 14 1 0 1 0 0 1 0 0
.............................GAATGGGGCGTTTGTTACGGT................................................................................................................................ 21 0 19 1.05 20 16 2 0 0 0 0 1 1 0
........................................................................GTTAGCCCTAGCTTGGCTG....................................................................................... 19 3 20 1.05 21 0 0 21 0 0 0 0 0 0
.......................................................................................................................GGGCGTGTCCTCGATTGCTGC...................................... 21 0 15 1.00 15 9 2 2 1 0 0 1 0 0
...................................GGCGTTTGTTACGGTCATTCA.......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................CGATTGCTGCCGGTAATAAT............................ 20 0 17 1.00 17 7 6 0 1 1 2 0 0 0
...................................................................TATAGGTTAGCCCTAGTTTAG.......................................................................................... 21 0 14 1.00 14 11 0 0 3 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCGCGGGCCGACGC....... 20 1 13 0.92 12 10 0 1 1 0 0 0 0 0
................................................................GAGTATAGGTTAGCCCTAGT.............................................................................................. 20 0 13 0.92 12 2 10 0 0 0 0 0 0 0
.GTTGCTGCTCCGGCTCGGCC............................................................................................................................................................. 20 0 17 0.88 15 7 4 3 1 0 0 0 0 0
.........................................................................................................AGGGAGAGAAGGGAGGGCGT..................................................... 20 1 14 0.86 12 10 1 0 1 0 0 0 0 0
....................................................................................................................................ATTGCTGCCGGTAATAATTCC......................... 21 0 13 0.85 11 6 4 0 0 1 0 0 0 0
............................................................TGTTGAGTATAGGTTAGCCCT................................................................................................. 21 0 13 0.85 11 7 0 2 2 0 0 0 0 0
.............................................................GTTGAGTATAGGTTAGCCCTA................................................................................................ 21 0 13 0.85 11 9 1 1 0 0 0 0 0 0
..................................................................................................................................CGATTGCTGCCGGTAATAATT........................... 21 0 17 0.82 14 9 3 0 0 2 0 0 0 0
.............GCTCGGCCTCGGTTACGAATG................................................................................................................................................ 21 1 16 0.81 13 12 0 1 0 0 0 0 0 0
...........................................................................AGCCCTAGTTTAGCTTAACAT.................................................................................. 21 0 15 0.80 12 7 2 2 0 1 0 0 0 0
...TGCTGCTCCGGCTCGGCCTCG.......................................................................................................................................................... 21 0 15 0.80 12 8 1 1 1 0 0 1 0 0
........................................................................................................................................................CTGTGCCCCGGGCCGACGCA...... 20 0 13 0.77 10 9 0 0 0 0 0 1 0 0
.......................................................................................................AGAGGGAGAGAAGGAAGGGC....................................................... 20 0 12 0.75 9 6 0 2 1 0 0 0 0 0
.....................................................................................................GGAGAGGGAGAGAAGGAAG.......................................................... 19 0 12 0.75 9 6 3 0 0 0 0 0 0 0
.......GCTCCGGCTCGGCCTCGGTTA...................................................................................................................................................... 21 1 16 0.75 12 9 0 2 1 0 0 0 0 0
.......................................................................GGTTAGCCCTAGTTTAGCTTA...................................................................................... 21 0 15 0.73 11 0 4 5 1 0 0 0 1 0
.............................................................................................................................GTCCTCGATTGCTGCCGGTAA................................ 21 0 14 0.71 10 5 2 3 0 0 0 0 0 0
...................................................................................................................GGAAGGGCGTGTCCTCGATT........................................... 20 0 14 0.71 10 8 0 1 1 0 0 0 0 0
.................................................................................................................................TCGATTGCTGCCGGTAATAAT............................ 21 0 17 0.71 12 3 6 1 0 2 0 0 0 0
...........................................................................................................................GTGTCCTCGATTGCTGCCGGT.................................. 21 0 14 0.64 9 8 0 0 0 0 0 1 0 0
...........CGGCTCGGCCTCGATTACGAA.................................................................................................................................................. 21 0 16 0.63 10 0 1 6 0 3 0 0 0 0
.............................................................GTTGAGTATAGGTTAGCCCT................................................................................................. 20 0 13 0.62 8 4 2 1 1 0 0 0 0 0
................................................................................................................................CTCGATTGCTGCCGGTAATA.............................. 20 0 17 0.59 10 2 7 0 1 0 0 0 0 0
..............................AATGGGGCGTTTGTTACGGT................................................................................................................................ 20 0 19 0.58 11 8 1 2 0 0 0 0 0 0
..................................................................................................................AGGAAGGGCGTGTCCTCGATT........................................... 21 0 14 0.57 8 7 0 0 1 0 0 0 0 0
.......................................................ACTCTTGTTGAGTGTAGGTTA...................................................................................................... 21 1 14 0.57 8 6 2 0 0 0 0 0 0 0
......TGCTCCGGCTCGGCCTCGGTT....................................................................................................................................................... 21 1 16 0.56 9 8 0 0 0 0 0 1 0 0
.............GCTCGGCCTCGGTTACGAAT................................................................................................................................................. 20 1 16 0.56 9 8 0 1 0 0 0 0 0 0
......................CGATTACGAATGGGGCGTTT........................................................................................................................................ 20 0 18 0.56 10 6 1 1 2 0 0 0 0 0
..........................................................CTTGTTGAGTATAGGTTAGCC................................................................................................... 21 0 13 0.54 7 4 1 0 0 0 2 0 0 0
....................................................................................................................................ATTGCTGCCGGTAATAATTC.......................... 20 0 13 0.54 7 2 1 2 0 2 0 0 0 0
.......................................................................................................................................................CCTGTGCCCCGGGCCGACGCA...... 21 0 13 0.54 7 6 0 0 1 0 0 0 0 0
........................................................................................................................................................CTGTGCCGCGGGCCGACGCA...... 20 1 13 0.54 7 6 0 0 1 0 0 0 0 0
........................................................................................................................GGCGTGTCCTCGATTGCTGCC..................................... 21 0 15 0.53 8 1 4 2 1 0 0 0 0 0
...............................ATGGGGCGTTTGTTACGGTC............................................................................................................................... 20 0 19 0.53 10 3 0 4 3 0 0 0 0 0
.........................................................................................................AGGGAGAGAAGGAAGGGCGTG.................................................... 21 0 14 0.50 7 7 0 0 0 0 0 0 0 0
........................................................CTCTTGTTGAGTATAGGTTAG..................................................................................................... 21 0 14 0.50 7 4 0 1 0 1 0 0 1 0
.........TCCGGCTCGGCCTCGATTAC..................................................................................................................................................... 20 0 16 0.50 8 2 0 3 1 1 1 0 0 0
........................................................................................................................................CTGCCGGTAATAATTCCTGT...................... 20 0 12 0.50 6 4 1 0 0 1 0 0 0 0
......TGCTCCGGCTCGGCCTCGAT........................................................................................................................................................ 20 0 16 0.50 8 4 0 2 1 0 0 1 0 0
....................................................................................................................GAAGGGCGTGTCCTCGGTTG.......................................... 20 1 14 0.50 7 7 0 0 0 0 0 0 0 0
.....CTGCTCCGGCTCGGCCTCGA......................................................................................................................................................... 20 0 16 0.50 8 3 0 1 3 0 1 0 0 0
........CTCCGGCTCGGCCTCGATTA...................................................................................................................................................... 20 0 16 0.50 8 1 0 2 2 2 1 0 0 0
.........................TTACGAATGGGGCGTTTGTT..................................................................................................................................... 20 0 19 0.47 9 6 1 1 1 0 0 0 0 0
............................CGAATGGGGCGTTTGTTAC................................................................................................................................... 19 0 19 0.47 9 7 0 0 1 0 0 1 0 0
............................CGAATGGGGCGTTTGTTACG.................................................................................................................................. 20 0 19 0.47 9 4 1 1 2 0 0 1 0 0
.........................TTACGAATGGGGCGTTTGTTA.................................................................................................................................... 21 0 19 0.47 9 9 0 0 0 0 0 0 0 0
.............................................................................................................................................................CCCCGGGCCGACGCACGGCGC 21 0 13 0.46 6 0 0 0 0 1 1 0 4 0
....................................................................................................GGGAGAGGGAGAGAAGGAA........................................................... 19 0 13 0.46 6 1 3 1 0 0 0 0 0 1
.....CTGCTCCGGCTCGGCCTCGG......................................................................................................................................................... 20 1 18 0.44 8 3 0 4 1 0 0 0 0 0
....GCTGCTCCGGCTCGGCCTCGG......................................................................................................................................................... 21 1 16 0.44 7 4 0 2 1 0 0 0 0 0
....GCTGCTCCGGCTCGGCCTCG.......................................................................................................................................................... 20 0 16 0.44 7 7 0 0 0 0 0 0 0 0
.......GCTCCGGCTCGGCCTCGATT....................................................................................................................................................... 20 0 16 0.44 7 2 0 3 2 0 0 0 0 0
.........................................................................................................AGGGAGAGAAGGGAGGGCGTG.................................................... 21 1 14 0.43 6 4 1 0 1 0 0 0 0 0
...........................................................................................................GGAGAGGAGGGAGGGCGTGT................................................... 20 2 19 0.42 8 2 1 1 0 0 0 0 0 4
.....................................................................................................GGAGAGGGAGAGAAGGAAGGGCGTGT................................................... 26 0 12 0.42 5 0 5 0 0 0 0 0 0 0
.......................................................................................................................................GCTGCCGGTAATAATTCCTG....................... 20 0 12 0.42 5 0 5 0 0 0 0 0 0 0
.....................TCGATTACGAATGGGGCGTTT........................................................................................................................................ 21 0 17 0.41 7 3 1 2 0 0 1 0 0 0
.......................................................................................................................GGGCGTGTCCTCGATTGCT........................................ 19 0 15 0.40 6 4 0 2 0 0 0 0 0 0
.....................................................................TAGGTTAGCCCTAGTTTAGCT........................................................................................ 21 0 15 0.40 6 1 3 1 0 1 0 0 0 0
......................................................................AGGTTAGCCCTAGTTTAGCTT....................................................................................... 21 0 15 0.40 6 0 3 2 0 0 1 0 0 0
........................................................................................................................GGCGTGTCCTCGATTGCTGC...................................... 20 0 15 0.40 6 4 0 1 0 0 0 1 0 0
.....................................................................................................GGAGAGGGAGAGAAGGAA........................................................... 18 0 13 0.38 5 0 4 1 0 0 0 0 0 0
........................................................................................................................................................CTGTGCCCCGGGCCGACGCAC..... 21 0 13 0.38 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................................CTGTGCCCCGGGCCGACGC....... 19 0 13 0.38 5 5 0 0 0 0 0 0 0 0
...................................................................................................................................GATTGCTGCCGGTAATAATTC.......................... 21 0 13 0.38 5 3 2 0 0 0 0 0 0 0
..........CCGGCTCGGCCTCGATTACGA................................................................................................................................................... 21 0 16 0.38 6 0 0 1 1 0 1 0 3 0
..........CCGGCTCGGCCTCGATTACG.................................................................................................................................................... 20 0 16 0.38 6 1 0 4 0 0 1 0 0 0
.........TCCGGCTCGGCCTCGGTTAC..................................................................................................................................................... 20 1 16 0.38 6 2 0 1 1 0 2 0 0 0
............................CGAATGGGGCGTTTGTTACGG................................................................................................................................. 21 0 19 0.37 7 0 0 7 0 0 0 0 0 0
...........................ACGAATGGGGCGTTTGTTACG.................................................................................................................................. 21 0 19 0.37 7 7 0 0 0 0 0 0 0 0
............................................................................................................................................CGGTAATAATTCCTGTGCCC.................. 20 0 11 0.36 4 1 3 0 0 0 0 0 0 0
....................................................................................................................GAAGGGCGTGTCCTCGATT........................................... 19 0 14 0.36 5 5 0 0 0 0 0 0 0 0
..................................................................GTATAGGTTAGCCCTAGTTT............................................................................................ 20 0 14 0.36 5 1 4 0 0 0 0 0 0 0
...............................................................................................................................CCTCGGTTGCTGCCGGTAATA.............................. 21 1 14 0.36 5 1 0 0 0 3 0 0 1 0
.............................................................................................................AGAGAAGGGAGGGCGTGTCCT................................................ 21 1 14 0.36 5 2 0 2 0 0 0 0 1 0
........................................................................................................GAGGGAGAGAAGGAAGGGC....................................................... 19 0 14 0.36 5 5 0 0 0 0 0 0 0 0
...................................................................................................................GGGAGGGCGTGTCCTCGGTTG.......................................... 21 2 14 0.36 5 3 0 1 1 0 0 0 0 0
...................................................................................................................GGAAGGGCGTGTCCTCGGTTG.......................................... 21 1 14 0.36 5 5 0 0 0 0 0 0 0 0
....................................................................................................................GAAGGGCGTGTCCTCGATTGT......................................... 21 1 14 0.36 5 4 0 0 1 0 0 0 0 0
...........................................................................................................GGAGAGAAGGAAGGGCGTGT................................................... 20 0 14 0.36 5 0 5 0 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGATTGCT........................................ 20 0 14 0.36 5 3 0 0 1 0 0 1 0 0
.........................................................................................................AGGGAGAGAAGGAAGGGCGTGT................................................... 22 0 14 0.36 5 3 1 1 0 0 0 0 0 0
.................................................................AGTATAGGTTAGCCCTAGTTT............................................................................................ 21 0 14 0.36 5 0 5 0 0 0 0 0 0 0
.............GCTCGGCCTCGGTTGCGAAT................................................................................................................................................. 20 2 17 0.35 6 6 0 0 0 0 0 0 0 0
....................CTCGGTTACGAATGGGGCGTT......................................................................................................................................... 21 1 17 0.35 6 4 0 0 0 0 1 0 1 0
.........................................................................................................................GCGTGTCCTCGATTGCTGC...................................... 19 0 15 0.33 5 2 1 2 0 0 0 0 0 0
......................CGGTTACGAATGGGGCGTTT........................................................................................................................................ 20 1 18 0.33 6 4 2 0 0 0 0 0 0 0
.....................................................................................................GGAGAGGGAGAGAAGGAAGG......................................................... 20 0 12 0.33 4 3 1 0 0 0 0 0 0 0
.............................................................................CCCTAGTTTAGCTTAACATTA................................................................................ 21 0 15 0.33 5 2 0 2 0 0 0 0 1 0
.....................................................................TCGGTTAGCCCTAGCTTGGCT........................................................................................ 21 3 15 0.33 5 0 0 5 0 0 0 0 0 0
.....................................................................................................................GAGGGCGTGTCCTCGGTTGCT........................................ 21 2 15 0.33 5 3 0 0 0 0 0 2 0 0
..TTGCTGCTCCGGCTCGGCCTC........................................................................................................................................................... 21 0 15 0.33 5 0 2 0 0 0 2 1 0 0
....................................................................ATAGGTTAGCCCTAGTTTAG.......................................................................................... 20 0 15 0.33 5 0 5 0 0 0 0 0 0 0
.......................................................................................................AGAGGGAGAGAAGGAAGGGCG...................................................... 21 0 12 0.33 4 1 3 0 0 0 0 0 0 0
.......................................................................................................................................GTTGCCGGTAATAATTCCTGT...................... 21 1 12 0.33 4 2 2 0 0 0 0 0 0 0
.......................................................................GGTTAGCCCTAGCTTGGCT........................................................................................ 19 2 15 0.33 5 0 0 5 0 0 0 0 0 0
.............................GAATGGGGCGTTTGTTACG.................................................................................................................................. 19 0 19 0.32 6 2 2 0 2 0 0 0 0 0
.........................TTACGAATGGGGCGTTTGTTAC................................................................................................................................... 22 0 19 0.32 6 5 0 0 0 0 0 0 1 0
...............................ATGGGGCGTTTGTTACGGTCA.............................................................................................................................. 21 0 16 0.31 5 4 0 0 0 0 0 0 1 0
.....CTGCTCCGGCTCGGCCTCGATT....................................................................................................................................................... 22 0 16 0.31 5 3 0 1 0 0 0 1 0 0
..TTGCTGCTCCGGCTCGGCCT............................................................................................................................................................ 20 0 16 0.31 5 3 1 1 0 0 0 0 0 0
........................................................................................................................................................CTGTGCCGCGGGCCGACGC....... 19 1 13 0.31 4 4 0 0 0 0 0 0 0 0
........................................................................................................................................................CTGTGCCCCGGGCCGGCGCA...... 20 1 13 0.31 4 4 0 0 0 0 0 0 0 0
............................................................TGTTGAGTGTAGGTTAGCCCT................................................................................................. 21 1 13 0.31 4 1 0 1 1 1 0 0 0 0
..........................................................................................................GGGAGAGGAGGGAGGGCGT..................................................... 19 2 20 0.30 6 4 1 0 1 0 0 0 0 0
......................................................................................................................................................TCCTGTGCCGCGGGCCGACGC....... 21 1 10 0.30 3 2 0 0 1 0 0 0 0 0
.........................................................................................................AGGGAGAGGAGGAAGGGCGT..................................................... 20 1 14 0.29 4 3 1 0 0 0 0 0 0 0
...........................................................................................................................GTGTCCTCGGTTGCTGCCGGT.................................. 21 1 14 0.29 4 0 0 0 0 0 0 3 1 0
.......................................................ACTCTTGTTGAGTATAGGTT....................................................................................................... 20 0 14 0.29 4 3 0 0 0 1 0 0 0 0
.......................................................................................................TGAGGGAGAGAAGGAAGGGC....................................................... 20 1 14 0.29 4 4 0 0 0 0 0 0 0 0
..............................................................................................................GAGAAGGAAGGGCGTGTCCTC............................................... 21 0 14 0.29 4 0 3 0 1 0 0 0 0 0
..............................................................................................................................................................CCCGGGCCGATGCACGGCGC 20 1 14 0.29 4 0 0 3 0 1 0 0 0 0
.....................................................................................................................AAGGGCGTGTCCTCGATTGTT........................................ 21 1 14 0.29 4 4 0 0 0 0 0 0 0 0
.............................................................................................................................................................CCCCGGGCCGATGCACGGCGC 21 1 14 0.29 4 0 0 2 0 0 2 0 0 0
.......................................................ACTCTTCTTGAGTATAGGTTA...................................................................................................... 21 1 14 0.29 4 3 0 0 0 1 0 0 0 0
..........................................................................................................GGGAGAGAAGGGAGGGCGT..................................................... 19 1 14 0.29 4 2 1 0 1 0 0 0 0 0
.................................................................................................................AAGGAAGGGCGTGTCCTCGAT............................................ 21 0 14 0.29 4 4 0 0 0 0 0 0 0 0
.............................................................................................................................GTCCTCGATTGCTGCCGGTA................................. 20 0 14 0.29 4 1 3 0 0 0 0 0 0 0
........................................................CTCTTCTTGAGTATAGGTTA...................................................................................................... 20 1 14 0.29 4 0 4 0 0 0 0 0 0 0
....................................................................................................GGGAGAGGGAGAGAAGGA............................................................ 18 0 18 0.28 5 0 2 3 0 0 0 0 0 0
...........................................................................................................................................CCGGTAATAATTCCTGTGCC................... 20 0 11 0.27 3 2 0 1 0 0 0 0 0 0
...............................................................................................TTAGGGGGAGAGGGAGAGA................................................................ 19 0 11 0.27 3 3 0 0 0 0 0 0 0 0
.....................................................................TAGGTTAGCCCTAGTTTAGC......................................................................................... 20 0 15 0.27 4 0 2 1 0 0 0 1 0 0
........................................................................GTTAGCCCTAGTTTAGCTTAA..................................................................................... 21 0 15 0.27 4 1 2 0 1 0 0 0 0 0
........................ATTACGAATGGGGCGTTTGTT..................................................................................................................................... 21 0 19 0.26 5 1 4 0 0 0 0 0 0 0
...........................ACGAATGGGGCGTTTGTTACGG................................................................................................................................. 22 0 19 0.26 5 1 0 4 0 0 0 0 0 0
...................................................................................................TGGGAGAGGGAGAGAAGGAAG.......................................................... 21 1 12 0.25 3 0 3 0 0 0 0 0 0 0
.................................GGGGCGTTTGTTACGGTCA.............................................................................................................................. 19 0 16 0.25 4 2 0 0 2 0 0 0 0 0
.......................................................................................................AGAGGGAGAGAAGGAAGGGCGT..................................................... 22 0 12 0.25 3 2 1 0 0 0 0 0 0 0
.......................................................................................................................................CCTGCCGGTAATAATTCCTGT...................... 21 1 12 0.25 3 3 0 0 0 0 0 0 0 0
.......GCTCCGGCTCGGCCTCGATTACGAAT................................................................................................................................................. 26 0 16 0.25 4 0 0 4 0 0 0 0 0 0
........CTCCGGCTCGGCCTCGGTTA...................................................................................................................................................... 20 1 16 0.25 4 0 0 1 1 1 0 1 0 0
...........CGGCTCGGCCTCGATTACGA................................................................................................................................................... 20 0 16 0.25 4 0 0 2 0 0 1 0 1 0
............GGCTCGGCCTCGATTACGA................................................................................................................................................... 19 0 16 0.25 4 1 0 3 0 0 0 0 0 0
......................................................................................................................................TGCTGCCGGTAATAATTCCTG....................... 21 0 12 0.25 3 2 0 1 0 0 0 0 0 0
..............CTCGGCCTCGATTACGAATGG............................................................................................................................................... 21 0 16 0.25 4 0 0 0 0 1 2 0 1 0
TGTTGCTGCTCCGGCTCGGC.............................................................................................................................................................. 20 0 17 0.24 4 3 0 0 1 0 0 0 0 0
.GTTGCTGCTCCGGCTCGGC.............................................................................................................................................................. 19 0 17 0.24 4 0 2 1 0 1 0 0 0 0
.....................................................................................TAGCTTAACGTTAGGGGGAGAGGGA.................................................................... 25 1 13 0.23 3 0 3 0 0 0 0 0 0 0
.....................................................................................TAGCTTAACATTAGGGGGAGA........................................................................ 21 0 13 0.23 3 2 0 0 1 0 0 0 0 0
......................................................................................AGCTTAACATTAGGGGGAGAGG...................................................................... 22 0 13 0.23 3 0 3 0 0 0 0 0 0 0
..................................................................................................GGGGGAGAGGGAGAGAAGGA............................................................ 20 0 13 0.23 3 0 1 2 0 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCCCGGGCCGGCGC....... 20 1 13 0.23 3 1 0 0 1 0 1 0 0 0
.....................................................................................................GGAGAGGGAGAGAAGGGAG.......................................................... 19 1 13 0.23 3 1 0 0 0 0 0 2 0 0
.............................................................CTTGAGTATAGGTTAGCCCTA................................................................................................ 21 1 13 0.23 3 0 0 0 0 2 0 0 1 0
...............................................................TGAGTATAGGTTAGCCCTAGT.............................................................................................. 21 0 13 0.23 3 2 0 0 1 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCGCGGGCCGACGCA...... 21 1 13 0.23 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................GATTGCGGCCGGTAATAATTC.......................... 21 1 13 0.23 3 0 3 0 0 0 0 0 0 0
...................................................................................................................GGAAGGGCGTGTCCTCGGTT........................................... 20 1 14 0.21 3 1 0 2 0 0 0 0 0 0
...........................................................................................................GGAGAGAAGGAAGGGCGTGTC.................................................. 21 0 14 0.21 3 0 2 0 1 0 0 0 0 0
...................................................................................................................GGAAGGGCGTGTCCTCGAT............................................ 19 0 14 0.21 3 1 0 2 0 0 0 0 0 0
.........................................................................................................AGGGAGAGAAGGAAGGGC....................................................... 18 0 14 0.21 3 1 2 0 0 0 0 0 0 0
...............................................................................................................................CCTCGATTGTTGCCGGTAATA.............................. 21 1 14 0.21 3 3 0 0 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGATTGCTG....................................... 21 0 14 0.21 3 0 2 1 0 0 0 0 0 0
.............................................................................................................AGAGAAGGAAGGGCGTGTCCT................................................ 21 0 14 0.21 3 1 1 1 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGATTGTTG....................................... 21 1 14 0.21 3 1 2 0 0 0 0 0 0 0
........................................................CTCTTGTTGAGTATAGGTTA...................................................................................................... 20 0 14 0.21 3 0 0 0 1 1 1 0 0 0
.....................................................................................................................AAGGGCGTGTCCTCGATTG.......................................... 19 0 14 0.21 3 3 0 0 0 0 0 0 0 0
......................................................CACTCTTCTTGAGTATAGGTT....................................................................................................... 21 1 14 0.21 3 2 1 0 0 0 0 0 0 0
...........................................................................................................GGAGAGAAGGAAGGGCGTGTCC................................................. 22 0 14 0.21 3 1 2 0 0 0 0 0 0 0
......................................................CACTCTTGTTGAGTGTAGGTT....................................................................................................... 21 1 14 0.21 3 1 1 0 0 1 0 0 0 0
..........................................................................................................GGGAGAGAAGGAAGGGCGTGTC.................................................. 22 0 14 0.21 3 0 3 0 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGATTGTT........................................ 20 1 14 0.21 3 3 0 0 0 0 0 0 0 0
..........................................................................................................GGGAGAGAAGGAAGGGCGTG.................................................... 20 0 14 0.21 3 0 3 0 0 0 0 0 0 0
..........................................................................................................GGGAGAGAAGGAAGGGCGTGTCC................................................. 23 0 14 0.21 3 3 0 0 0 0 0 0 0 0
.................................................................................................................AAGGAAGGGCGTGTCCTCGA............................................. 20 0 14 0.21 3 3 0 0 0 0 0 0 0 0
................................................................................................................GAAGGAAGGGCGTGTCCTCGG............................................. 21 1 14 0.21 3 3 0 0 0 0 0 0 0 0
....................................................................................................................GAAGGGCGTGTCCTCGGTTGC......................................... 21 1 14 0.21 3 3 0 0 0 0 0 0 0 0
.............................................................................................................AGAGAAGGGAGGGCGTGTCC................................................. 20 1 14 0.21 3 3 0 0 0 0 0 0 0 0
...................................................................TATAGGTTAGCCCTAGTTTA........................................................................................... 20 0 14 0.21 3 2 1 0 0 0 0 0 0 0
............................CGAATGGGGCGTTTGTTACGGT................................................................................................................................ 22 0 19 0.21 4 3 0 1 0 0 0 0 0 0
................................TGGGGCGTTTGTTACGGTC............................................................................................................................... 19 0 19 0.21 4 3 0 0 1 0 0 0 0 0
..........................TACGAATGGGGCGTTTGTTACGG................................................................................................................................. 23 0 19 0.21 4 0 0 4 0 0 0 0 0 0
.........................................................................................................................GCGTGTCCTCGATTGCTGCC..................................... 20 0 15 0.20 3 3 0 0 0 0 0 0 0 0
......................................................................AGGTTAGCCCTAGTTTAGCT........................................................................................ 20 0 15 0.20 3 0 3 0 0 0 0 0 0 0
..........................................................................................................................CGTGTCCTCGGTTGCTGCC..................................... 19 1 15 0.20 3 1 0 1 0 0 0 1 0 0
...................................................................AATAGGTTAGCCCTAGTTTAGC......................................................................................... 22 1 15 0.20 3 0 3 0 0 0 0 0 0 0
...TGCTGCTCCGGCTCGGCCTC........................................................................................................................................................... 20 0 15 0.20 3 2 0 1 0 0 0 0 0 0
....................................................................................................................................................ATTCCTGTGCCCCGGGCCGAC......... 21 0 10 0.20 2 1 0 0 1 0 0 0 0 0
.......GCTCCGGCTCGGCCTCGGTT....................................................................................................................................................... 20 1 16 0.19 3 2 0 1 0 0 0 0 0 0
........CTCCGGCTCGGCCTCGATT....................................................................................................................................................... 19 0 16 0.19 3 0 0 1 0 2 0 0 0 0
..........................................................................................................GGGAGAGGAGGGAGGGCGTGT................................................... 21 2 16 0.19 3 1 1 0 0 0 0 1 0 0
.....CTGCTCCGGCTCGGCCTCG.......................................................................................................................................................... 19 0 16 0.19 3 1 0 0 1 0 1 0 0 0
..........CCGGCTCGGCCTCGATTACGAAT................................................................................................................................................. 23 0 16 0.19 3 0 0 3 0 0 0 0 0 0
.........TCCGGCTCGGCCTCGATTACG.................................................................................................................................................... 21 0 16 0.19 3 1 0 1 1 0 0 0 0 0
...................................................................................................GGGGAGAGGGAGAGAAGGAA........................................................... 20 0 11 0.18 2 0 2 0 0 0 0 0 0 0
...................................................................................................GGGGAGAGGGAGAGAAGGAAG.......................................................... 21 0 11 0.18 2 0 1 0 1 0 0 0 0 0
..............................................................................................ATTAGGGGGAGAGGGAGAGAA............................................................... 21 0 11 0.18 2 1 0 1 0 0 0 0 0 0
...........................................................................................AACATTAGGGGGAGAGGGAGAGGAGGA............................................................ 27 1 11 0.18 2 0 2 0 0 0 0 0 0 0
............GGCTCGGCCTGGATTACGAAT................................................................................................................................................. 21 1 17 0.18 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................CGGTTGCTGCCGGTAATAATT........................... 21 1 17 0.18 3 0 0 1 1 1 0 0 0 0
TGTTGCTGCTCCGGCTCGGCC............................................................................................................................................................. 21 0 17 0.18 3 2 1 0 0 0 0 0 0 0
..................................................................................................................................CGGTTGCTGCCGGTAATAAT............................ 20 1 17 0.18 3 2 0 1 0 0 0 0 0 0
................................................................................................................................CTCGATTGTTGCCGGTAATA.............................. 20 1 17 0.18 3 1 0 0 0 2 0 0 0 0
.............GCTCGGCCTGGATTACGAATG................................................................................................................................................ 21 1 17 0.18 3 1 1 1 0 0 0 0 0 0
...................................................................................................................................GATTGCTGCCGGTAATAATT........................... 20 0 17 0.18 3 0 3 0 0 0 0 0 0 0
....................................................................................................................................TTTGCTGCCGGTAATAATTCCTGT...................... 24 1 12 0.17 2 0 2 0 0 0 0 0 0 0
.....................................................................................................GGAGAGGGAGAGAAGGAAGGGCGT..................................................... 24 0 12 0.17 2 0 2 0 0 0 0 0 0 0
.........................................................................................................AGGGAGAGGAGGGAGGGCGT..................................................... 20 2 18 0.17 3 3 0 0 0 0 0 0 0 0
....................................................................................................GGGAGAGGGAGAGAAGGAAGG......................................................... 21 0 12 0.17 2 1 1 0 0 0 0 0 0 0
.......................................................................................................AGAGGGAGAGAAGGAAGGGCGTGTCC................................................. 26 0 12 0.17 2 0 2 0 0 0 0 0 0 0
......................................................................CGGTTAGCCCTAGCTTGGCT........................................................................................ 20 3 18 0.17 3 0 0 3 0 0 0 0 0 0
.....................................................................................................................................TTGCTGCCGGTAATAATTCCTG....................... 22 0 12 0.17 2 2 0 0 0 0 0 0 0 0
......................................................................................................GAGAGGGAGAGAAGGAAGGGC....................................................... 21 0 12 0.17 2 1 1 0 0 0 0 0 0 0
.........................TTACGAGTGGGGCGTTTGTTA.................................................................................................................................... 21 1 19 0.16 3 2 0 0 0 0 0 1 0 0
...........................ACGAATGGGGCGTTTGTTA.................................................................................................................................... 19 0 19 0.16 3 3 0 0 0 0 0 0 0 0
.......................GATTACGAATGGGGCGTTT........................................................................................................................................ 19 0 19 0.16 3 1 2 0 0 0 0 0 0 0
.........................TTACGGGTGGGGCGTTTGTTA.................................................................................................................................... 21 2 19 0.16 3 2 0 0 1 0 0 0 0 0
..............................................................................................................................................................CCCGGGCCGACGCACGGCGC 20 0 13 0.15 2 0 0 2 0 0 0 0 0 0
................................................................GAGTATAGGTTAGCCCTAGTTTA........................................................................................... 23 0 13 0.15 2 0 2 0 0 0 0 0 0 0
...........................................................TTGTTGAGTATAGGTTAGCCC.................................................................................................. 21 0 13 0.15 2 1 1 0 0 0 0 0 0 0
.....................................................................................................................................TTGCTGCCGGTAATAATTCC......................... 20 0 13 0.15 2 1 0 0 0 0 1 0 0 0
....................................................................................................................................ATTGCGGCCGGTAATAATTCC......................... 21 1 13 0.15 2 0 1 0 1 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCGCGGGCCGACG........ 19 1 13 0.15 2 1 0 1 0 0 0 0 0 0
........................................................................................................................................................CTGTGCCGCGGGCCGACG........ 18 1 13 0.15 2 2 0 0 0 0 0 0 0 0
................................................................GAGTGTAGGTTAGCCCTAGTT............................................................................................. 21 1 13 0.15 2 1 1 0 0 0 0 0 0 0
............................................................................................................................TGTGCTCGACTGCTGTCGGT.................................. 20 3 20 0.15 3 1 0 2 0 0 0 0 0 0
.......................................................................................................AGAGGGAGAGAAGGTAGGC........................................................ 19 2 20 0.15 3 1 0 2 0 0 0 0 0 0
................................................................................................................................................................CGGGCCGACGCACGGCGC 18 0 20 0.15 3 0 0 0 0 3 0 0 0 0
..........................................................................................................GGGAGAGAAGGAAGGGCG...................................................... 18 0 14 0.14 2 0 0 2 0 0 0 0 0 0
..........................................................................................................GGGAGAGGAGGAAGGGCGTGT................................................... 21 1 14 0.14 2 2 0 0 0 0 0 0 0 0
.................................................................AGTATAGGTTAGCCCTAGTT............................................................................................. 20 0 14 0.14 2 0 2 0 0 0 0 0 0 0
.........................................................TCTTCTTGAGTATAGGTTAG..................................................................................................... 20 1 14 0.14 2 2 0 0 0 0 0 0 0 0
.............................................................................................................AGAGAAGGAAGGGCGTGTC.................................................. 19 0 14 0.14 2 2 0 0 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGGTTGCT........................................ 20 1 14 0.14 2 1 0 1 0 0 0 0 0 0
.........................................................................................................AGGGAGAGAAGGAAGGGCG...................................................... 19 0 14 0.14 2 1 0 1 0 0 0 0 0 0
............................................................................................................GAGAGAAGGAAGGGCGTGTCC................................................. 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0
...........................................................................................................GGAGAGAAGGGAGGGCGTGT................................................... 20 1 14 0.14 2 1 0 0 0 0 0 0 0 1
..........................................................................................................................CGTGTCCTCGATTGCTGCCGG................................... 21 0 14 0.14 2 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCCCGGGCCGATGC....... 20 1 14 0.14 2 1 1 0 0 0 0 0 0 0
.....................................................................................................................AAGGGCGTGTCCTCGATTGT......................................... 20 1 14 0.14 2 2 0 0 0 0 0 0 0 0
..........................................................CTTGTTGAGTATAGGTTAGC.................................................................................................... 20 0 14 0.14 2 0 0 1 0 0 1 0 0 0
............................................................................................................GAGAGAAGGAAGGGCGTGT................................................... 19 0 14 0.14 2 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................TGCCCCGGGCCGACGCACG.... 19 0 14 0.14 2 1 0 1 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGATTGC......................................... 19 0 14 0.14 2 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCCCGGGCCGATGCA...... 21 1 14 0.14 2 1 0 0 0 0 0 1 0 0
..................................................................................................................AGGAAGGGCGTGTCCTCGGT............................................ 20 1 14 0.14 2 2 0 0 0 0 0 0 0 0
..........................................................................................................TGGAGAGAAGGAAGGGCGTGTC.................................................. 22 1 14 0.14 2 2 0 0 0 0 0 0 0 0
............................................................................................................................TGTCCTCGATTGTTGCCGGT.................................. 20 1 14 0.14 2 0 2 0 0 0 0 0 0 0
................................................................................................................GAAGGGAGGGCGTGTCCTCGA............................................. 21 1 14 0.14 2 2 0 0 0 0 0 0 0 0
....................................................................................................................AAAGGGCGTGTCCTCGATTGCT........................................ 22 1 14 0.14 2 1 0 1 0 0 0 0 0 0
......................................................................................................................AGGGCGTGTCCTCGGTTGC......................................... 19 1 14 0.14 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................CCTGTGCCCCGGGCCGATG........ 19 1 14 0.14 2 2 0 0 0 0 0 0 0 0
..........................................................................................................AGGAGAGAAGGAAGGGCGT..................................................... 19 1 14 0.14 2 1 1 0 0 0 0 0 0 0
.....................................................................................................................GAGGGCGTGTCCTCGATTGCT........................................ 21 1 14 0.14 2 2 0 0 0 0 0 0 0 0
............................................................................................................GAGAGAAGGAAGGGCGTGTCCT................................................ 22 0 14 0.14 2 1 1 0 0 0 0 0 0 0
...........................................................................................................GGAGAGGAGGAAGGGCGTGT................................................... 20 1 14 0.14 2 0 0 0 0 0 0 0 0 2
........................................................................................................GAGGGAGAGAAGGAAGGGCG...................................................... 20 0 14 0.14 2 2 0 0 0 0 0 0 0 0
......................................................CACTCTTGTTGAGTATAGGT........................................................................................................ 20 0 14 0.14 2 1 1 0 0 0 0 0 0 0
...................................................................................................................GGAAGGGCGTGTCCTCGGT............................................ 19 1 14 0.14 2 1 0 0 0 0 0 1 0 0
...............................................................................................................................CCTCGATTGCTGCCGGTAA................................ 19 0 14 0.14 2 1 0 1 0 0 0 0 0 0
...........................................................................................................GGAGAGAAGGGAGGGCGTGTC.................................................. 21 1 14 0.14 2 1 1 0 0 0 0 0 0 0
.................................................................................................................GAGGAAGGGCGTGTCCTCGAT............................................ 21 1 14 0.14 2 2 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_621:11453-11630 + dps_2124 ACAACGACGAGGCCGA--GCCGG---AGCTAATGCTTACCCCGCAAACAATGCCAGTAAGTGAGAACAACT-----CATATCCAATCGGGATCAAAT----------------------CGAATTGTAATCCCCCTCTCCCTCTCTTCCTTCCCGCACAGGAGCTAACGACGGCCATTATTAAGGACACGGGGCCCGGCTGCGTGCCGCG
droPer2 scaffold_30:30750-30900 - ATAACGACGAGGCCGA--GCCGG---AGCTAATGCTTACCCCGCAAACAATGCCAGTGAGTGAGAACAACT-----CATATCCAATCGGGATTAAAT----------------------CGAATTGTAATCCCCCTCTCCCTCTCTTCCTTCCCGCACAGGAGCTAACGACGGCCATTATTAA---------------------------
droWil2 scf2_1100000004909:7481047-7481107 + AGAAAACTGTGGCCGC--ACAAA---AAACACTAATAACGCCCCAGACTATGCCAGTGAGTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:7557825-7557879 - GCACCAGTGAC-----GGGACAGAACGAGTGATGCCAATGCCGCAGACTATGCCGGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6482:2163229-2163292 + CCAGCAGTGAA-----GAATCTGAGCTAATGATGCCAATGCCACAGACAATGCCAGTAAGTAAGCTCAA---------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:7054904-7054959 + AGC--GAT--------AAACCCGAAGTGATAATGCCAGTGCCGCAGACAATGCCAGTAAGCATGAA------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13047:998649-998779 - TCAACGCG--------GAGCCGAATTCCATTGTGTTCACACCGCAGACTATGCCCGTAAGTATAAAAAAA-------------------------------ACTAGCCAAGAGTCTAACC-AGTGACCAA---------------CTA-CCGTTCTCCAGGAGCTGGCTAGTGCGATTATCAAGAAC-----------------------
droBip1 scf7180000396431:773102-773233 - TCAACGCA--------GCGGCCAATCCACTTGTGTTCACACCGCAGACTATGCCGGTAAGTACTAAAAAAA-----A------------------------ACTATCCAAGAGTCTAAAA-AGTTAAGAG---------------CTA-CCTTTATCCAGGAGCTGGCTAGTGCGATTATCAAGGA------------------------
droKik1 scf7180000302704:125658-125718 + TAA-TGC-----------------------------------------------------------------------------------------------------------------------------CCTTCCTTCGCACTTAATTTCTTTCCAGGAGCTGGCCAGTGCGATCATTAAGAAC-----------------------
droFic1 scf7180000454073:2049310-2049366 - GACACGGA--------GAGGAGAATCCTCTTGTCCTAACGCCGCAAAGCATGCCTGTAAGTGTGA-------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491018:136511-136566 + TTCAAGCC--------GAGTCCAATCCCCTCGTGCTCACGCCGCAAAGCATGCCCGTAAGTGGG--------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779966:30183-30240 - GTCATGAT--------GAGCTAAATCCTCTCGTACTCACGCCGCAAAGTATGCCTGTAAGTGTGGA------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301760:5105936-5105993 - GTCATGTC--------GAGGCTGATCCCCTCGTGCTTACGCCGCAAAGCATGCCGGTAAGTCGGGA------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415696:90486-90540 - CGCAGACG--------GAGTCCAATCCCCTCGTGCTCACGCCGCAAAGCATGCCAGTAAGTGA---------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409032:825342-825399 + GTCACGTT--------GAGACGAATCCTCTCCTGCTCACACCACAAAGTATGCCTGTAAGTAGGAA------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:9136352-9136404 - GTCATACC--------GAGTCCAATCCACTTCTGCTCACGCCGCAAAGCATGCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:8682479-8682531 - GTCACACC--------GAGCTCAATCCACTTCTGCTCACGCCGCAAAGCATGCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_68:24065-24117 - GTCACACC--------GAGCTCAATCCACTTCTGCTCACGCCGCAAAGCATGCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:17732440-17732499 - AGGTCGA-GCC-----GAGCCTAATCCTCTCGTGCTCACACCGCAAAGCATGCCTGTAAGTTGGAA------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:5979050-5979196 + GTCGTTCC--------GAGTCTAATCCTCTCGTGCTCACGCCGCAAAGCATGCCTGTAAGTTGGAAACCATGCGACTATGTCTACTTGGTGTTAAAAAACAA------------------------------CACTT-TTCCGATTTACGTTGTTTCCAGGAACTGGCTAGTGCGATAATTAAGAA------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ACAACGACGAGGCCGA--GCCGG---AGCTAATGCTTACCCCGCAAACAATGCCAGTAAGTGAGAACAACT-----CATATCCAATCGGGATCAAAT----------------------CGAATTGTAATCCCCCTCTCCCTCTCTTCCTTCCCGCACAGGAGCTAACGACGGCCATTATTAAGGACACGGGGCCCGGCTGCGTGCCGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................CATTATTAAGGACACGGGGC................201132.00352010100303452
..............................................................................................................................................................................CATTATTAAGGACACGGGG.................191124.002640000011102511
......................................................................................................................................................................................AGGACACGGGGCCCGGCTGCG.......211023.60236011101102301
..............................................................................................................................................................................CATTATTAAGGACACGGGGCC...............211113.911536302012901102
...............................................................................................................................................................................ATTATTAAGGACACGGGGC................19119.009901000000980
...............................................................................................................................................................................ATTATTAAGGACACGGGG.................18117.187900000000781
..............................................................................................................................................................................CATTATTAAGGACACGGG..................18115.005500000000550
..........................................................................................................................................................................CGGCCATTATTAAGGACACGG...................21114.555002000000480
...............................................................................................................................................................................ATTATTAAGGACACGGGGCC...............20113.824212000140340
...ACGACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................21153.675500020147050
..................................................................................................................................................................................ATTAAGGACACGGGGCCCGGC...........21103.203201000120271
.................................................................................................................................................................................TATTAAGGACACGGGGCCCGG............21102.502501000120210
ACAACGACGAGGCCGA--GCCGG---........................................................................................................................................................................................21172.243809100320050
.............................................................................................................................................................................CCATTATTAAGGACACGGGG.................20112.092302000020190
.........................................................................................................................................................CGCACAGGAGCTAACGACGGC....................................21142.072900000140240
.CAACGACGAGGCCGA--GCCGG---........................................................................................................................................................................................20172.063502010125060
......................................................................................................................................................................................AGGACACGGGGCCCGGCTGC........20102.002001000020170
...............................................................................................................................................................................ATTATTAAGGACACGGGGCCC..............21112.002230000010072
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTGCG.......22102.002000000000191
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTG.........20102.002003010050110
.............................................................................................................................................................................CCATTATTAAGGACACGGG..................19111.912101000100190
..............................................................................................................................................................................CATTATTAAGGACACGGGGT................20111.822000000040160
.CAACGACGAGGCCGA--GCCGG---A.......................................................................................................................................................................................21161.812902000217341
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTGC........21101.801810020000150
...ACGACGAGGCCGA--GCCGG---AG......................................................................................................................................................................................20151.732603000119030
..................................................................CAACT-----CATATCCAATCGGGAT......................................................................................................................21131.692201011217000
.............................................................................................................................................................................CCATTATTAAGGACACGGGGC................21111.641800000000180
............................................................................................................................................................................GCCATTATTAAGGACACGGG..................20111.641804000100130
...................................................................................................................................................................................TTAAGGACACGGGGCCCGGC...........20101.50151000006080
...........................................................................................................................................................CACAGGAGCTAACGACGGCC...................................20141.502120020060110
....................................................................................................................................................................................TAAGGACACGGGGCCCGGCTG.........21101.501500000040110
...........................................................................................................................................................CACAGGAGCTAACGACGGC....................................19141.502100010150140
............................................................................................CAAAT----------------------CGAATTGTAATCCCCC...........................................................................21151.472200010010200
....CGACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................20161.442303020414000
..AACGACGAGGCCGA--GCCGG---A.......................................................................................................................................................................................20161.442302010117020
..........................................................................................ATCAAAT----------------------CGAATTGTAATCCC.............................................................................21151.402110120000170
..............................................................................................AAT----------------------CGAATTGTAATCCCCCTC.........................................................................21131.381800010000152
.....GACGAGGCCGA--GCCGG---AGCT....................................................................................................................................................................................20161.382200000121000
ACAACGACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................24151.332001710200000
............................................................................................................................................................................GCCATTATTAAGGACACGGGG.................21111.271402010000110
...........................................................................................................................................................CACAGGAGCTAACGACGGCCA..................................21141.141600102011020
ACAACGACGAGGCCGA--GCCGG---AG......................................................................................................................................................................................23151.131701700000000
.................................................................................................................................................................................TATTAAGGACACGGGGCCCG.............20101.10111100002070
..................................................................................................................................................................................ATTAAGGACACGGGGCCCGG............20101.10110100011080
................................................................................................................................................................................TTATTAAGGACACGGGGCCC..............20111.09120100009020
.............CGA--GCCGG---AGCTAATGCTTAC...........................................................................................................................................................................21161.001610000113010
...................................................................................................................................................................CTAACGACGGCCATTATTAAG..........................21131.001300000000130
..AACGACGAGGCCGA--GCCGG---AG......................................................................................................................................................................................21151.00150100009050
...ACGACGAGGCCGA--GCCGG---A.......................................................................................................................................................................................19160.941502000112000
....CGACGAGGCCGA--GCCGG---AGT.....................................................................................................................................................................................20160.941501000014000
.........................................................................................................................................................CGCACAGGAGCTAACGACGG.....................................20150.93140100005080
...............................................................GAACAACT-----CATATCCAATCGG.........................................................................................................................21130.921201000000110
.................................................................ACAACT-----CATATCCAATCGGGA.......................................................................................................................21130.92120210117000
................................................................................................................................................................................TTATTAAGGACACGGGGCC...............19110.911000000000100
......................................................................................CGGGATCAAAT----------------------CGAATTGTAA.................................................................................21150.871300000000130
................................................................................................T----------------------CGAATTGTAATCCCCCTCTC.......................................................................21130.85110002000090
................................................................................................................................................................................TTATTAAGGACACGGGGC................18110.8290000000090
.......CGAGGCCGA--GCCGG---AGCTAAT.................................................................................................................................................................................21160.811300000110020
................................................................................................................................................................................TTATTAAGGACACGGGGCCCG.............21100.8080100001060
....................................................................................................................................................................................TAAGGACACGGGGCCCGGCTT.........21100.8080000000080
....................................................................................................................................................................TAACGACGGCCATTATTAAGG.........................21130.77100300000070
..............................................................AGAACAACT-----CATATCCAATCGG.........................................................................................................................22130.77100100000090
.....GACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................19160.75120101127000
...................CCGG---AGCTAATGCTTACCCCG.......................................................................................................................................................................21160.75120400007010
...........................................................................................................................................................CACAGGAGCTAACGACGG.....................................18150.731100000100100
..........................................................................................ATCAAAT----------------------CGAATTGTAATCC..............................................................................20150.731100000000110
..............................................................................................................................................CTCTTCCTTCCCGCACAGGAG...............................................21140.71100210122011
......................................................................................................................................................................................AGGACACGGGGCCCGGCTGT........20100.7070000004030
............................................................................................CAAAT----------------------CGAATTGTAATCCCC............................................................................20150.67100100010080
.....................................................................................TCGGGATCAAAT----------------------CGAATTGTA..................................................................................21150.671000000000100
.......................................................................................................................................................................CGACGGCCATTATTAAGGAC.......................20120.6784100000030
.........................................................................................................................................................................ACGGCCATTATTAAGGACACG....................21110.6474000002010
...........................................................................................TCAAAT----------------------CGAATTGTAATCCC.............................................................................20150.6092000000070
..AACGACGAGGCCGA--GCCGG---........................................................................................................................................................................................19170.59100300043000
.......................................................................................................................................TCTCCCTCTCTTCCTTCCCGC......................................................21120.5870212000020
...............................................................................................................................................TCTTCCTTCCCGCACAGGAGC..............................................21140.5780203003000
......ACGAGGCCGA--GCCGG---AGCTAA..................................................................................................................................................................................21160.5690100004040
............................................................................................CAAAT----------------------CGAATTGTAATCCC.............................................................................19150.5380000000080
.CAACGACGAGGCCGA--GCCGG---AG......................................................................................................................................................................................22150.5380700000100
ACAACGACGAGGCCGA--GCC.............................................................................................................................................................................................19170.5390000017010
...........GCCGA--GCCGG---AGCTAATGCTT.............................................................................................................................................................................21160.5080000017000
......................................................................................................................................................................................AGGACACGGGGCCCGGCTG.........19100.5050000001040
..............................................................................................................................................................AGGAGCTAACGACGGCCATTA...............................21140.5070100010050
................................................................................................................................................CTTCCTTCCCGCACAGGAGCT.............................................21140.5070000105010
........................................................................................................................................................CCGCACAGGAGCTAACGACGGC....................................22140.5070000000070
......................................................................................................................................................TCCCGCACAGGAGCTAACGACG......................................22140.5070100006000
.......................................................................................GGGATCAAAT----------------------CGAATTGTAAT................................................................................21150.4770000000070
........................................................................................................................................................CCGCACAGGAGCTAACGACGG.....................................21150.4770000005020
............................................................................................................................................................................GCCATTATTAAGGACACGG...................19110.4550100120010
.................................................................................................................................................................................TATTAAGGACACGGGGCCC..............19110.4553000001010
.....GACGAGGCCGA--GCCGG---AGCTA...................................................................................................................................................................................21160.4470100015000
............................................................................................................................................................ACAGGAGCTAACGACGGCCA..................................20140.4360000004011
...................................TTACCCCGCAAACAATGCCAG..........................................................................................................................................................21190.4280600000020
...........................................................................................TCAAAT----------------------CGAATTGTAATCCCC............................................................................21150.4060101000040
.CAACGACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................23150.4060410001000
......................................................................................CGGGATCAAAT----------------------CGAATTGTA..................................................................................20150.4060000002040
.............................................................................................AAAT----------------------CGAATTGTAATCCCCCT..........................................................................21130.3850100001030
........................................................................................................................GAATTGTAATCCCCCTCTCC......................................................................20130.3850203000000
....................................................................................................................................................................TAACGACGGCCATTATTAAG..........................20130.3850000000050
...ACGACGAGGCCGA--GCCGG---AC......................................................................................................................................................................................20160.3861000005000
ACAACGACGAGGCCGA--GCCGG---A.......................................................................................................................................................................................22160.3860600000000
.............CGA--GCCGG---AGCTAATGCTTA............................................................................................................................................................................20160.3860000005010
..............................................................................................................................................................................CATTATTAAGGACACGGGGCT...............21110.3640000000040
.......................................................................................................................................................................CGACGGCCATTATTAAGGACACGG...................24110.3640000000040
..............................................................................................................................................................................CATTATTAAGGACACGGGGA................20110.3640000000040
..............................................................................................................................................................................CATTATTAAGGACACGGGGCCC..............22110.3640000000040
...ACGACGAGGCCGA--GCCGG---AGT.....................................................................................................................................................................................21150.3350000005000
.............................................................................................AAAT----------------------CGAATTGTAATCCCCC...........................................................................20150.3351000000040
.........AGGCCGA--GCCGG---AGCTAATGC...............................................................................................................................................................................21160.3150000013010
.......................................................................................................................................................................................GGACACGGGGCCCGGCTGCG.......20130.3140400000000
.......................................................................................................................CGAATTGTAATCCCCCTCTC.......................................................................20130.3141000000030
....................................................................................................................................................................................TAAGGACACGGGGCCCGGCTGCG.......23100.3030000000030
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTT.........20100.3030100001010
....................................................................................................................................................................................TAAGGACACGGGGCCCGGCTGT........22100.3030000000030
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTGT........21100.3030000000030
....................................................................................................................................................................................TAAGGACACGGGGCCCGGC...........19100.3030000003000
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTGCC.......22100.3030000000030
...................................................................................................................................................................CTAACGACGGCCATTATTAA...........................20170.2950100000040
ACAACGACGAGGCCGA--GCCGT---........................................................................................................................................................................................21170.2950100004000
ACAACGACGAGGCCGA--GCCG............................................................................................................................................................................................20170.2950000004010
............................................................................................................................................................ACAGGAGCTAACGACGGCCAT.................................21140.2940000001030
................................................................................................................................................................................TTATTAAGGACACGGGG.................17110.2730000000030
.........................................................................................................................................................................ACGGCCATTATTAAGGACACGG...................22110.2730000000030
..............................................................................................................................................................................CATTATTAAGGACACGGGGCA...............21110.2730100000020
...........................................................................................TCAAAT----------------------CGAATTGTAATCC..............................................................................19150.2740000000040
.......................................................................................................................................................CCCGCACAGGAGCTAACGACGG.....................................22150.2740000001030
......................................................................................CGGGATCAAAT----------------------CGAATTGTAAT................................................................................22150.2740000000040
..AACGACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................22150.2740110002000
............CCGA--GCCGG---AGCTAATGCTTA............................................................................................................................................................................21160.2540000004000
......ACGAGGCCGA--GCCGG---AGCTA...................................................................................................................................................................................20160.2540000002020
.........AGGCCGA--GCCGG---AGCTAATG................................................................................................................................................................................20160.2540000013000
......................................................................................................................................................................ACGACGGCCATTATTAAGGAC.......................21120.2531100000010
....CGACGAGGCCGA--GCCGG---AGCT....................................................................................................................................................................................21160.2540100003000
.......................................................................................................................................TCTCCCTCTCTTCCTTCCCG.......................................................20120.2530200010000
....................CGG---AGCTAATGCTTACCCCGC......................................................................................................................................................................21170.2440010012000
...ACGACGAGGCCGA--GCCGG---........................................................................................................................................................................................18170.2440400000000
...............................................................................................AT----------------------CGAATTGTAATCCCCCTC.........................................................................20130.2330000000030
...............................................................................................AT----------------------CGAATTGTAATCCCCCTCTCC......................................................................23130.2330000000030
................................................................AACAACT-----CATATCCAATCGGG........................................................................................................................21130.2330110100000
..........................................................................................................................ATTGTAATCCCCCTCTCCCTC...................................................................21130.2330201000000
.................................................................ACAACT-----CATATCCAATCGG.........................................................................................................................19130.2330000000030
....................................................................................................................................................CTTCCCGCACAGGAGCTAACG.........................................21140.2130200001000
.................................................................................................................................................TTCCTTCCCGCACAGGAGCTA............................................21140.2130000003000
..................................................................................................................................................TCCTTCCCGCACAGGAGCTAA...........................................21140.2130000003000
.............................................................................ATATCCAATCGGGATCAAAT----------------------C..........................................................................................21140.2130000003000
.............................................................................................................................................................CAGGAGCTAACGACGGCCATT................................21140.2130000001020
............................................................................................................................................CTCTCTTCCTTCCCGCACAGG.................................................21140.2130300000000
............................................................................................................................................................ACAGGAGCTAACGACGGCC...................................19140.2130000000030
.......................................................................................................................................................CCCGCACAGGAGCTAACGACGGC....................................23140.2130000000030
...............................ATGCTTACCCCGCAAACAATG..............................................................................................................................................................21190.2140101000020
................................................................................................................................................................................TTATTAAGGACACGGGGCCCGG............22100.2020000000020
..........................................................................................................................................................GCACAGGAGCTAACGACGG.....................................19150.2030000002010
.............................................................................................................................................................................CCATTATTAAGGACACGGGGCCCGGC...........26100.2020000000020
...................................................................................................................................................................................TTAAGGACACGGGGCCCGGCT..........21100.2020000001010
....................................................................................................................................................................................TAAGGACACGGGGCCCGGCTA.........21100.2020000000020
....................................................................................................................................................................................TAAGGACACGGGGCCCGGCT..........20100.2020000000020
ACAACGACGAGGCCGA--GCCGG---AGCTA...................................................................................................................................................................................26150.2030300000000
...............................................................................ATCCAATCGGGATCAAAT----------------------CGA........................................................................................21150.2030001002000
......................................................................................CGGGATCAAAT----------------------CGAATTGTAAA................................................................................22150.2030000000030
......................................................................................................................................................................................AGGACACGGGGCCCGGCTGCC.......21100.2020000000020
.....................................................................................................................................................................................AAGGACACGGGGCCCGGCTCT........21100.2020000000020
................................................................................TCCAATCGGGATCAAAT----------------------CGA........................................................................................20150.2030010001010
...........................................................................................TCAAAT----------------------CGAATTGTAATCCCCC...........................................................................22150.2030000000030
.CAACGACGAGGCCGA--GCCGG---AGCTA...................................................................................................................................................................................25150.2030300000000
................................................................................................................................................................................TTATTAAGGACACGGGGCCCGGC...........23100.2020000010010
.......................................................................................................................................................CCCGCACAGGAGCTAACGAC.......................................20150.2030000000030
..........................................................................................ATCAAAT----------------------CGAATTGTAATCCCC............................................................................22150.2030000000030
.....GACGAGGCCGA--GCCGG---AGT.....................................................................................................................................................................................19160.1930000003000
......ACGAGGCCGA--GCCGG---AGCTAATG................................................................................................................................................................................23160.1930000012000
.....GACGAGGCCGA--GCCGG---AG......................................................................................................................................................................................18160.1930000003000
.......CGAGGCCGA--GCCGG---AGCTAA..................................................................................................................................................................................20160.1930000003000
..........................................................................................ATCAAAT----------------------CGAATTGTAATC...............................................................................19160.1930000000030
........GAGGCCGA--GCCGG---AGCTAATG................................................................................................................................................................................21160.1930000003000
.......CGAGGCCGA--GCCGG---AGCTA...................................................................................................................................................................................19160.1930100002000
.................................................................................................................................................................................TATTAAGGACACGGGGCC...............18110.1820100000010
..........................................................................................................................................................................CGGCCATTATTAAGGACACGGG..................22110.1820100000010
.............................................................................................................................................................................CCATTATTAAGGACACGGGGT................21110.1820000101000
........................................................................................................................................................................GACGGCCATTATTAAGGACAC.....................21110.1820100000010
...............................................................................................................................................................................ATTATTAAGGACACGGGGT................19110.1820000000020
...........................................................................................................................................................................GGCCATTATTAAGGACACGGG..................21110.1820000000020
...................................................................................................................................CCCCTCTCCCTCTCTTCCTTCC.........................................................22110.1820101000000
.......................................................................................................................................................................CGACGGCCATTATTAAGGACACGGG..................25110.1820000000020
.CAACGACGAGGCCGA--GCCGG---T.......................................................................................................................................................................................21170.1830000003000
ACAACGACGAGGCCGA--GCCGG---T.......................................................................................................................................................................................22170.1830000002010
............................................................................................................................................................................................CGGGGCCCGGCTGCGTGCCGCG22120.1720200000000
......................................................................................................................................CTCTCCCTCTCTTCCTTCCCGT......................................................22120.1720000011000
.............................TAATGCTTACCCCGCAAACAATGCCA...........................................................................................................................................................26190.1630300000000
.............................TAATGCTTACCCCGCAAACAATGCCAG..........................................................................................................................................................27190.1630300000000
..........................................................................................................................................................................................CACGGGGCCCGGCTGCGTGC....20130.1520100010000
.........................................................................................................................................................................................ACACGGGGCCCGGCTGCG.......18130.1520100010000
.........................................................................................................................................................................................ACACGGGGCCCGGCTGCGTGC....21130.1520100001000
.........................................................................................................................AATTGTAATCCCCCTCTCCC.....................................................................20130.1520002000000
..........................................................................................................................................................................................CACGGGGCCCGGCTGCGTGCC...21130.1520100000010
..............................................................................................AAT----------------------CGAATTGTAATCCCCCT..........................................................................20130.1520000000020
..............................................................................................AAT----------------------CGAATTGTAATCCCCCTCTCCC.....................................................................25130.1520000000020
................................................................................................T----------------------CGAATTGTAATCCCCCTCT........................................................................20130.1520100000010
........................................................................................................................................................................................GACACGGGGCCCGGCTGCG.......19130.1520100000010
..................................................................CAACT-----CATATCCAATCGGGATT.....................................................................................................................22130.1520000011000
..............................................................................................................................................................................................GGGCCCGGCTGCGTGCCGCG20130.1520200000000
..................................................................CAACT-----CATATCCAATCGGGA.......................................................................................................................20130.1520000002000
................................................................AACAACT-----CATATCCAATCGG.........................................................................................................................20130.1520000001010
.........................................................................................................................................................................................ACACGGGGCCCGGCTGCGT......19130.1520000002000
.............................................................................................................................................TCTCTTCCTTCCCGCACAG..................................................19140.1420000000020
.....................................................................................................................................................TTCCCGCACAGGAGCTAACGAC.......................................22140.1420000002000
.....................................................................................TCGGGATCAAAT----------------------CGAATTGTAATCCCCC...........................................................................28140.1420000000020
............................................................................................................................................................ACAGGAGCTAACGACGGC....................................18140.1420000000020
......................................................................................................................................................TCCCGCACAGGAGCTAACGACGG.....................................23140.1420000000020
............................................................................................................................................................ACAGGAGCTAACGACGGCCATT................................22140.1420000002000
..............................................................AGAACAACT-----CATATCCAATCG..........................................................................................................................21140.1420000001010
...............................................................................ATCCAATCGGGATCAAAT----------------------CG.........................................................................................20150.1320200000000
........................................................................................GGATCAAAT----------------------CGAATTGTAAT................................................................................20150.1320000000020
...ACGACGAGGCCGA--GCCGG---AGCT....................................................................................................................................................................................22150.1320000011000
ACAACGACGAGGCCGA--GCCGG---AGCT....................................................................................................................................................................................25150.1320200000000
....................................................................................ATCGGGATCAAAT----------------------CGAATTGT...................................................................................21150.1320000000020
ACAACGACGAGGCCGA--GCCGG---AGCTAA..................................................................................................................................................................................27150.1320200000000
................................................................................TCCAATCGGGATCAAAT----------------------CGAATTGTA..................................................................................26150.1320000000020
..AACGACGAGGCCGA--GCCGG---AGT.....................................................................................................................................................................................22150.1320000101000
droPer2
ATAACGACGAGGCCGA--GCCGG---AGCTAATGCTTACCCCGCAAACAATGCCAGTGAGTGAGAACAACT-----CATATCCAATCGGGATTAAAT----------------------CGAATTGTAATCCCCCTCTCCCTCTCTTCCTTCCCGCACAGGAGCTAACGACGGCCATTATTAA---------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................AAT----------------------CGAATTGTAATCCCCCTC.........................................................................2112.002200000
....CGACGAGGCCGA--GCCGG---AGC.....................................................................................................................................................................................2011.001100000
....CGACGAGGCCGA--GCCGG---AGCT....................................................................................................................................................................................2111.001000010
droWil2
AGAAAACTGTGGCCGC--ACAAA---AAACACTAATAACGCCCCAGACTATGCCAGTGAGTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GCACCAGTGAC-----GGGACAGAACGAGTGATGCCAATGCCGCAGACTATGCCGGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................AGAACGAGTGATGCCAATGC.........................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
.....................AGAACGAGTGATGCCAAT...........................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
droMoj3
CCAGCAGTGAA-----GAATCTGAGCTAATGATGCCAATGCCACAGACAATGCCAGTAAGTAAGCTCAA---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGC--GAT--------AAACCCGAAGTGATAATGCCAGTGCCGCAGACAATGCCAGTAAGCATGAA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TCAACGCG--------GAGCCGAATTCCATTGTGTTCACACCGCAGACTATGCCCGTAAGTATAAAAAAA-------------------------------ACTAGCCAAGAGTCTAACC-AGTGACCAA---------------CTA-CCGTTCTCCAGGAGCTGGCTAGTGCGATTATCAAGAAC-----------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TCAACGCA--------GCGGCCAATCCACTTGTGTTCACACCGCAGACTATGCCGGTAAGTACTAAAAAAA-----A------------------------ACTATCCAAGAGTCTAAAA-AGTTAAGAG---------------CTA-CCTTTATCCAGGAGCTGGCTAGTGCGATTATCAAGGA------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TAA-TGC-----------------------------------------------------------------------------------------------------------------------------CCTTCCTTCGCACTTAATTTCTTTCCAGGAGCTGGCCAGTGCGATCATTAAGAAC-----------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GACACGGA--------GAGGAGAATCCTCTTGTCCTAACGCCGCAAAGCATGCCTGTAAGTGTGA-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCAAGCC--------GAGTCCAATCCCCTCGTGCTCACGCCGCAAAGCATGCCCGTAAGTGGG--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTCATGAT--------GAGCTAAATCCTCTCGTACTCACGCCGCAAAGTATGCCTGTAAGTGTGGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GTCATGTC--------GAGGCTGATCCCCTCGTGCTTACGCCGCAAAGCATGCCGGTAAGTCGGGA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGCAGACG--------GAGTCCAATCCCCTCGTGCTCACGCCGCAAAGCATGCCAGTAAGTGA---------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTCACGTT--------GAGACGAATCCTCTCCTGCTCACACCACAAAGTATGCCTGTAAGTAGGAA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GTCATACC--------GAGTCCAATCCACTTCTGCTCACGCCGCAAAGCATGCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....ACC--------GAGTCCAATCCACTTCTGCT..............................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATCCACTTCTGCTCACGC.........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................TCCAATCCACTTCTGCTCACGCCGC......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCTCACGCCGCAAAGCATG..............................................................................................................................................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTCACACC--------GAGCTCAATCCACTTCTGCTCACGCCGCAAAGCATGCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GTCACACC--------GAGCTCAATCCACTTCTGCTCACGCCGCAAAGCATGCCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AGGTCGA-GCC-----GAGCCTAATCCTCTCGTGCTCACACCGCAAAGCATGCCTGTAAGTTGGAA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GTCGTTCC--------GAGTCTAATCCTCTCGTGCTCACGCCGCAAAGCATGCCTGTAAGTTGGAAACCATGCGACTATGTCTACTTGGTGTTAAAAAACAA------------------------------CACTT-TTCCGATTTACGTTGTTTCCAGGAACTGGCTAGTGCGATAATTAAGAA------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:10 AM