ID:

dps_2116

 Coordinate:

Unknown_group_621:746-809 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.0

Flybase annnotation

exon [dpse_GLEANR_7026:2]; CDS [Dpse\GA27847-cds]; CDS [Dpse\GA27847-cds]; exon [dpse_GLEANR_7026:1]; intron [Dpse\GA27847-in]

No Repeatable elements found

mature
  1. dps_2116  Unknown_group_621:759-780 -
  2. dps_2117  Unknown_group_621:2825-2846 -
star

Sense Strand Reads

##################################################----------------------------------------------------------------##################################################
GAATCTGACTAAAGATCGCTTCCTGCGGCGCTATGTGGACCAGGATCCGTGTAAGTGGCACAGCACAAAAAACGCTTTTATAGCATCCATTAAATTCTGAAAACTTCTAACTAGATGTTCCCCTGGAGATCTTTCTCACGTTCAACAAAATGAAGCCCCTCGCC
**************************************************..((((....(((..........(((.....)))............)))...))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 SRR902011
testis
 M040
female body
 V112
male body		 M062
head
 GSM444067
head
 M059
embryo
 GSM343916
embryo
 M022
male body
...TCTGACTAAAGATCGCTTCCTGC.......................................................................................................................................... 23 0 13 4.62 60 60 0 0 0 0 0 0 0 0
.....TGACTAAAGATCGCTTCCTGCGGCGC..................................................................................................................................... 26 0 13 0.92 12 10 2 0 0 0 0 0 0 0
...TCTGACTAAAGATCGCTTCCTGCGGCGC..................................................................................................................................... 28 0 13 0.77 10 10 0 0 0 0 0 0 0 0
...TCTGACTAAAGATCGCTTCCT............................................................................................................................................ 21 0 13 0.69 9 9 0 0 0 0 0 0 0 0
...............................................................................ATAGCATCCATTAAATTCTGAA............................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................................CATCCATTAAATTCTGAAAAC............................................................ 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..............................................................................TATAGCATCCATTAAATTCTGA................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.........TAAAGATCGCTTCCTGCGGCGCTATG................................................................................................................................. 26 0 13 0.46 6 6 0 0 0 0 0 0 0 0
...TCTGACTAAAGATCGCTTCCTG........................................................................................................................................... 22 0 13 0.38 5 5 0 0 0 0 0 0 0 0
............................CGCTATGTGGACCAGGATCCGT.................................................................................................................. 22 0 3 0.33 1 0 0 0 1 0 0 0 0 0
.................................TGTGGACCAGGATCCGTGTAAGTGGCA........................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................AATTCTGAAAACTTCTAACTAG.................................................. 22 0 12 0.33 4 4 0 0 0 0 0 0 0 0
...TCTGACTAAAGATCGCTTCCTGCGGC....................................................................................................................................... 26 0 13 0.31 4 4 0 0 0 0 0 0 0 0
..........................................................................................TAAATTCTGAAAACTTCTAACTAG.................................................. 24 0 12 0.25 3 3 0 0 0 0 0 0 0 0
............................................................................................AATTCTGAAAACTTCTAACTAGA................................................. 23 0 12 0.25 3 3 0 0 0 0 0 0 0 0
...TCTGACTAAAGATCGCTTCC............................................................................................................................................. 20 0 13 0.23 3 2 1 0 0 0 0 0 0 0
.....TGACTAAAGATCGCTTCCTGCGGC....................................................................................................................................... 24 0 13 0.23 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................CGTTCAACAAAATGAAGCCCCTC... 23 0 11 0.18 2 2 0 0 0 0 0 0 0 0
.......................TGCGGCGCTATGTGGACCAGG........................................................................................................................ 21 0 11 0.18 2 0 0 0 2 0 0 0 0 0
.......................................................................................................CTTCTAACTAGATGTTCCCCTGG...................................... 23 0 12 0.17 2 0 0 2 0 0 0 0 0 0
..........................................................................................TAAATTCTGAAAACTTCTAACTA................................................... 23 0 12 0.17 2 2 0 0 0 0 0 0 0 0
............................................................................................AATTCTGAAAACTTCTAACTAGATGT.............................................. 26 0 12 0.17 2 2 0 0 0 0 0 0 0 0
.....TGACTAAAGATCGCTTCCTGC.......................................................................................................................................... 21 0 13 0.15 2 0 0 2 0 0 0 0 0 0
........CTAAAGATCGCTTCCTGCGGC....................................................................................................................................... 21 0 13 0.15 2 0 0 0 1 0 1 0 0 0
..ATCTGACTAAAGATCGCTTCC............................................................................................................................................. 21 0 13 0.15 2 0 2 0 0 0 0 0 0 0
.....TGACTAAAGATCGCTTCCTGCGGCG...................................................................................................................................... 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0
...................................TGGACCAGGATCCGTATG............................................................................................................... 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0
......................................................................................................................TCCCCTGGAGATCTTTCTCAC......................... 21 0 11 0.09 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................TTCAGCAAAATGAGGCCCCTC... 21 2 11 0.09 1 0 0 0 0 1 0 0 0 0
...........................GCGCTATGTGGACCAGGATCC.................................................................................................................... 21 0 11 0.09 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TCACGTTCAACAAAATGAAG......... 20 0 11 0.09 1 0 0 1 0 0 0 0 0 0
...........................GCGCTATGTGGACCAGGATC..................................................................................................................... 20 0 11 0.09 1 0 0 0 1 0 0 0 0 0
.........................CGGCGCTATGTGGACCAGG........................................................................................................................ 19 0 11 0.09 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................CCCCTGGAGATCTTTCTCACGTTCAAC.................. 27 0 11 0.09 1 0 0 0 0 0 0 1 0 0
................................................................................................................................................ACAAAATGAAGCCCCTCG.. 18 0 11 0.09 1 0 0 1 0 0 0 0 0 0
.......................TGCGGCGCTATGTGGACCAGGATC..................................................................................................................... 24 0 11 0.09 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TCACGTTCAACAAAATGAAGCCCCTCG.. 27 0 11 0.09 1 0 0 0 1 0 0 0 0 0
.......................TGCGGCGCTATGTGGACCAGGAT...................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................TCAACAAAGTGAAGCCCCTCG.. 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................AAACGTTCAACAAAATGAAGCCCCTCG.. 27 2 11 0.09 1 1 0 0 0 0 0 0 0 0
........................GCGGCGCTATGTGGACCAGG........................................................................................................................ 20 0 11 0.09 1 0 0 1 0 0 0 0 0 0
............................CGCTATGTGGACCAGGATC..................................................................................................................... 19 0 11 0.09 1 0 0 1 0 0 0 0 0 0
.......................................................................................CATTAAATTCTGAAAACTTCTAAC..................................................... 24 0 12 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................................................................GTGTTCCCCTGGAGATCTTTCT............................ 22 1 12 0.08 1 0 0 1 0 0 0 0 0 0
.............................................................................................................ACTAGATGTTCCCCTGGAGA................................... 20 0 12 0.08 1 0 0 1 0 0 0 0 0 0
.........................................................................................TTAAATTCTGAAAACTTCTAA...................................................... 21 0 12 0.08 1 0 1 0 0 0 0 0 0 0
..........................................................................................TAAATTCTGAAAACTTCTAACTAGA................................................. 25 0 12 0.08 1 0 1 0 0 0 0 0 0 0
................................................................................................................AGATGTTCCCCTGGTGAT.................................. 18 1 12 0.08 1 0 0 0 0 0 0 0 1 0
......................CTGCGGCGCTGTGTGGACC........................................................................................................................... 19 1 13 0.08 1 0 0 0 0 1 0 0 0 0
........CTAGGGATCGCTTCCTGCGGC....................................................................................................................................... 21 2 13 0.08 1 0 0 0 0 0 1 0 0 0
...........ATGATCGCTTCCTGCGGCGCT.................................................................................................................................... 21 1 13 0.08 1 0 0 0 0 0 0 1 0 0
....................TCCTGCGGCGCTATGTGGACC........................................................................................................................... 21 0 13 0.08 1 0 0 0 0 0 0 1 0 0
......GACTAAAGATCGCTTCCTGC.......................................................................................................................................... 20 0 13 0.08 1 0 0 0 0 1 0 0 0 0
.......ACTAAAGATCGCTTCCTGCGGCGCT.................................................................................................................................... 25 0 13 0.08 1 0 0 0 1 0 0 0 0 0
......................CTGCGGCGCTATGTGGACC........................................................................................................................... 19 0 13 0.08 1 0 0 0 0 0 0 0 0 1
.......ACTAAAGATCGCTTCCTGCGGCGCTATGT................................................................................................................................ 29 0 13 0.08 1 0 0 0 1 0 0 0 0 0
..........AAAGATCGCTTCCTGCGGCGC..................................................................................................................................... 21 0 13 0.08 1 0 0 0 0 0 0 1 0 0
...TCTGACTAGGGATCGCTTCCT............................................................................................................................................ 21 2 13 0.08 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................TGGAGGTCTTTCTCAGGTT...................... 19 2 13 0.08 1 0 0 1 0 0 0 0 0 0
....CTGACTAAAGATCGCTTCCT............................................................................................................................................ 20 0 13 0.08 1 0 0 0 0 0 1 0 0 0
....................TCCTGCGGCGCTATGTGGAC............................................................................................................................ 20 0 13 0.08 1 0 0 1 0 0 0 0 0 0
....................TCCTGCGGCGCTGTGTGGAC............................................................................................................................ 20 1 13 0.08 1 0 0 0 0 0 1 0 0 0
....CTGACTAAAGATCGCTTCCTG........................................................................................................................................... 21 0 13 0.08 1 0 0 0 1 0 0 0 0 0
............AGATCGCTTCCTGCGGCGCT.................................................................................................................................... 20 0 13 0.08 1 0 0 1 0 0 0 0 0 0
..........AAAGATCGCTTCCTGCGGC....................................................................................................................................... 19 0 13 0.08 1 0 0 1 0 0 0 0 0 0
........CTAAGGATCGCTTCCTGCGGC....................................................................................................................................... 21 1 13 0.08 1 0 0 0 0 0 1 0 0 0
.........TAAAGATCGCTTCCTGCGGCGCT.................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0 0
...TCTGACTAAAGATCGCTTCCTGA.......................................................................................................................................... 23 1 13 0.08 1 1 0 0 0 0 0 0 0 0
........CGAAAGATCGCTTCATGCTGC....................................................................................................................................... 21 3 16 0.06 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CTTAGACTGATTTCTAGCGAAGGACGCCGCGATACACCTGGTCCTAGGCACATTCACCGTGTCGTGTTTTTTGCGAAAATATCGTAGGTAATTTAAGACTTTTGAAGATTGATCTACAAGGGGACCTCTAGAAAGAGTGCAAGTTGTTTTACTTCGGGGAGCGG
**************************************************..((((....(((..........(((.....)))............)))...))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M040
female body
 M022
male body		 GSM444067
head
 M062
head
 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
...........................................................................................................................ACCTCTAGAAAGAGTGCAAGTTGTTT............... 26 0 11 17.00 187 187 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTAGAAAGAGTGCAAGTTGTTT............... 24 0 11 14.36 158 158 0 0 0 0 0 0 0 0 0
.........................................................................................................................GGACCTCTAGAAAGAGTGCAAGTTGTTT............... 28 0 11 11.09 122 122 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGAGTGCAAGTTGTTT............... 25 0 11 10.73 118 118 0 0 0 0 0 0 0 0 0
.........................................................................................................................GGACCTCTAGAAAGAGTGCAAGTTGTT................ 27 0 11 10.00 110 110 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACCTCTAGAAAGAGTGCAAGTTGTTT............... 27 0 11 8.82 97 97 0 0 0 0 0 0 0 0 0
..........................................................................GAAAATATCGTAGGTAATTTAAGACT................................................................ 26 0 2 7.00 14 13 0 0 1 0 0 0 0 0 0
...........................................................................................................................ACCTCTAGAAAGAGTGCAAGTTGTT................ 25 0 11 6.27 69 69 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACCTCTAGAAAGAGTGCAAGTTGTT................ 26 0 11 5.73 63 63 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTT............... 22 0 11 5.64 62 53 9 0 0 0 0 0 0 0 0
..............................................................................................................................TCTAGAAAGAGTGCAAGTTGTTT............... 23 0 11 5.09 56 53 3 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTTT.............. 23 0 11 4.91 54 54 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGAGTGCAAGTTGTT................ 24 0 11 4.73 52 52 0 0 0 0 0 0 0 0 0
.....................................................................................AGGTAATTTAAGACTTTTGAAGAT....................................................... 24 0 2 3.50 7 7 0 0 0 0 0 0 0 0 0
..........................................................................AAAAATATCGTAGGTAATTTAAGACT................................................................ 26 1 2 3.00 6 6 0 0 0 0 0 0 0 0 0
..........................................................................GAAAATATCGTAGGTAATTTAAGACTT............................................................... 27 0 2 2.50 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTAGAAAGAGTGCAAGTTGTT................ 23 0 11 2.36 26 26 0 0 0 0 0 0 0 0 0
.............................................AGGCACATTCACCGTGTCGTGTTTTT............................................................................................. 26 0 3 2.00 6 5 0 0 1 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTTTACT........... 26 0 11 1.55 17 17 0 0 0 0 0 0 0 0 0
..........................................................................GAAAATATCGTAGGTAATTTAAGACTTT.............................................................. 28 0 2 1.50 3 3 0 0 0 0 0 0 0 0 0
.............................................AGGCACATTCACCGTGTCGTGTTT............................................................................................... 24 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.............................................AGGCACATTCACCGTGTCGTGTTTTTT............................................................................................ 27 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTAGAAAGAGTGCAAGTTGTTTT.............. 25 0 11 1.27 14 14 0 0 0 0 0 0 0 0 0
.........................................................................AGAAAATATCGTAGGTAATTTAAGA.................................................................. 25 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................ACTGAAAATATCGTAGGTAATTTAAG................................................................... 26 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCTAGAAAGAGTGCAAGTTGTTTT.............. 24 0 11 1.00 11 11 0 0 0 0 0 0 0 0 0
............................................................................AAATATCGTAGGTAATTTAAGACTT............................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................AGGTAATTTAAGACTTTTGAAGA........................................................ 23 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTT................ 21 0 11 0.91 10 3 7 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTTTAC............ 25 0 11 0.73 8 8 0 0 0 0 0 0 0 0 0
.............................................AGGCACATTCACCGTGTCGTGTTTT.............................................................................................. 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
...............................................ACACATTCACCGTGTCGTGTTTTTTGCA......................................................................................... 28 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..........................................CCTAGGCACATTCACCGTGTCGTGT................................................................................................. 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.........................................................CGTGTCGTGTTTTTTGCGAAAATAT.................................................................................. 25 0 9 0.67 6 6 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCTAGAAAGAGTGCAAGTTGTT................ 22 0 11 0.64 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTTGAAAGAGTGCAAGTTGTTT............... 24 1 11 0.64 7 7 0 0 0 0 0 0 0 0 0
.....................................................TCACCGTGTCGTGTTTTTTGCGAAAAT.................................................................................... 27 0 8 0.63 5 5 0 0 0 0 0 0 0 0 0
.........................................................................................AATTTAAGACTTTTGAAGATTGAT................................................... 24 0 12 0.58 7 7 0 0 0 0 0 0 0 0 0
...........................................................................................................................TACTCTAGAAAGAGTGCAAGTTGTTT............... 26 2 11 0.55 6 6 0 0 0 0 0 0 0 0 0
..........................................................................AAAAATATCGTAGGTAATTTAAGACTT............................................................... 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................AATATCGTAGGTAATTTAAGACTTT.............................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
......................................................................TTGCGAAAATATCGTAGGTAA......................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................AGGTGATTTAAGACTTTTGAAGAT....................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...................................................................................GTAGGTAATTTAAGACTTTTG............................................................ 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................GGGACCTCTAGAAAGAGTGCAAGTTGTT................ 28 0 11 0.45 5 5 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCTCTAGAAAGAGTGCAAGTTGTTTT.............. 27 0 11 0.45 5 5 0 0 0 0 0 0 0 0 0
......................................................CACCGTGTCGTGTTTTTTGCGAAAAT.................................................................................... 26 0 8 0.38 3 3 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGAGTGCAAGTTGTTTT.............. 26 0 11 0.36 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGTGCAAGTTGTTTTACTTCGGGGA.... 25 0 11 0.36 4 4 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGACCTCTAGAAAGAGTGCAAGTTGTT................ 27 1 11 0.36 4 4 0 0 0 0 0 0 0 0 0
...........................CGCGATACACCTGGTCCTAGGCACAT............................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................CTAGGCACATTCACCGTGTCGTGTTT............................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................GATACACCTGGTCCTAGGCACATT.............................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................CTAGGCACATTCACCGTGTCGTGTTTT.............................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................AGAAGGACGCCGCGATACACCTGGT.......................................................................................................................... 25 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................................AACCTCTAGAAAGAGTGCAAGTTGTTT............... 27 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................GAGTCTAGAAAGAGTGCAAGTTGTTT............... 26 3 11 0.27 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTGGAAAGAGTGCAAGTTGTTT............... 24 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGAAAGAGTGCAAGTTGTTTT.............. 21 0 11 0.27 3 1 0 2 0 0 0 0 0 0 0
..........................CCGCGATACACCTGGTCCTAG..................................................................................................................... 21 0 11 0.27 3 0 0 1 2 0 0 0 0 0 0
........................................................CCGTGTCGTGTTTTTTGCGAAAAT.................................................................................... 24 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
..........................................................GTGTCGTGTTTTTTGCGAAAAT.................................................................................... 22 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0
................................................................................................................................TAGAAAGAGTGCAAGTTGTTTT.............. 22 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................AGGGGACCTCTAGAAAGAGTGCAAGT.................... 26 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTTTA............. 24 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTTTACTT.......... 27 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGAAAGAGTGCAAGTTGTTT............... 20 0 11 0.18 2 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................GAAAGAGTGCAAGTTGTTT............... 19 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................TACCTCTAGAAAGAGTGCAAGTTGTTTT.............. 28 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGACCTCTAGAAAGAGTGCAAGTTGTT................ 27 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................GGACCTCTAGAAAGAGTGCAAGTTGTTTT.............. 29 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCTCTAGAAAGAGTGCAAGTTGTTC............... 26 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................AACCTCTAGAAAGAGTGCAAGTTGTT................ 26 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTAGAAAGAGTGCAAGTTG.................. 21 0 11 0.18 2 0 0 0 1 0 0 1 0 0 0
.......................................................................................................GAAGATTGATCTACAAGGGGA........................................ 21 0 12 0.17 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................GTAATTTAAGACTTTTGAAGATTGAT................................................... 26 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
............................................................................................TTAAGACTTTTGAAGATTGATCT................................................. 23 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................AGGGGACCTCTAGAAAGAGT.......................... 20 0 12 0.17 2 0 2 0 0 0 0 0 0 0 0
.................CGAAGGACGCCGCGATACACC.............................................................................................................................. 21 0 13 0.15 2 0 0 2 0 0 0 0 0 0 0
................GCGAAGGACGCCGCGATACAC............................................................................................................................... 21 0 13 0.15 2 0 0 2 0 0 0 0 0 0 0
.....CAAGATTTCTAGCGAAGGAC........................................................................................................................................... 20 3 15 0.13 2 0 2 0 0 0 0 0 0 0 0
......................................................CACCGTGTCGTGTTTTTTGCGAAAATAT.................................................................................. 28 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...................................................ATTCACCGTGTCGTGTTTTTTGCGA........................................................................................ 25 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.........................................................CGTGTCGTGTTTTTTGCGGGAA..................................................................................... 22 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................CTCTAGGAAGAGTGCAAGTTGTTT............... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................ACTAGAAAGAGTGCAAGTTGTTTTAC............ 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAACCTCTAGAAAGAGTGCAAGTTGTTT............... 28 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGGAAGAGTGCGAGTTGTTT............... 20 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGAGTGCAAGTTGT................. 23 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGGGTGCAAGTTGTT................ 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................GGACCTCTAGAAAGAGGGCAAGTTGTTT............... 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GGGACCTCTAGAAAGAGTGCAAGTTGTTT............... 29 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................AGGACCTCTAGAAAGAGTGCAAGTTGTT................ 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................ACTCTCGAAAGAGTGCAAGTTGTT................ 24 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................GCCGCGATACACCTGGTCCTAGG.................................................................................................................... 23 0 11 0.09 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................CGGACCTCTAGAAAGAGTGCAAGTTGTT................ 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTCTCGAAAGAGTGCAAGTTGTTT............... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTTGAAAGAGTGCAAGTTGTT................ 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGAAAGAGTGCAAGTTGTTTT.............. 21 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................GAAAGAGTGCAAGTTGT................. 17 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAAAAGAGTGCAAGTTGTTTTAC............ 23 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.................................................ACATTCACCGTGTCGTGTTTT.............................................................................................. 21 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................AGGACCTCTAGAAAGAATGCAAGTTGTT................ 28 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGAGTGCGAGTTGTTTTACTT.......... 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................GGGACCTCTAGAAAGAGTGCAAGTTGT................. 27 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................ACCTCTAGGAAGAGTGCAAGTTGTTT............... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCTCTAGAAAGAGTGCAAGTTGT................. 24 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGAATGCAAGTTGTTT............... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGACCTCTAGAAAGAGTGCAAGTTGTTT............... 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGTGCAAGTTGTTTTAG............ 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................GCCGCGGTACACCTGGTCCTA...................................................................................................................... 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................CTCTAGAAAGAGTGCAAGTTGTTTTA............. 26 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................ACTCTAGAAAGAGTGCAAGTTGTTT............... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGAGTGCAAGTTGTTTTACTTC......... 22 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAAAGTGCAAGTTGTT................ 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................GAGTGCAAGTTGTTTTACTTC......... 21 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0
..........................CCGCGATACACCTGGTCCTA...................................................................................................................... 20 0 11 0.09 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................CCTCTAGAAAGAGTGCAAGTCGTTT............... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTAGAAAGAGGGCAAGTTGTTTTACT........... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GAGCTCTAGAAAGAGTGCAAGTTGTTT............... 27 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGACCTCTAGAAAGAGTGCAAGTTGTTT............... 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CAAGTTGTTTTACTTCGGGGA.... 21 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................GACCTCTAGAAAGAGTGCAAGTTGT................. 25 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................AACTCTAGAAAGAGTGCAAGTTGTTT............... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................................................................................GGTAATTTAAGACTTTTGAAGATTGAT................................................... 27 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................GAAGATTGATCTACAAGGGGACCT..................................... 24 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGGGGACCTCTAGAAAGAGT.......................... 20 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................CAAGGGGACCTCTAGAAAGA............................ 20 0 12 0.08 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................AGGGGACCTCTAGAAAGAGTT......................... 21 1 12 0.08 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................TTGGGGACCTCTAGAAAGAGT.......................... 21 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................AAGGGGACCTCTAGGGAGAGT.......................... 21 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0
....................AGGACGCCGCGATATACCTG............................................................................................................................ 20 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0
........GATTTCTAGCGAAGGACGC......................................................................................................................................... 19 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0
............TCTAGCGAAGGACGCCGCGATACACCT............................................................................................................................. 27 0 13 0.08 1 0 0 1 0 0 0 0 0 0 0
...................AAGGACGCCGCGATACACCT............................................................................................................................. 20 0 13 0.08 1 0 0 1 0 0 0 0 0 0 0
.................CGAAGGACGCCGCGATACAC............................................................................................................................... 20 0 13 0.08 1 0 0 0 0 0 0 0 0 1 0
..................GGAGGACGCCGCGATACACC.............................................................................................................................. 20 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................GTGCGAGTTGGTATACTTCGG....... 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 1
................GCGAAGGACGCCGCACTAC................................................................................................................................. 19 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................TAGGGGACCTCTAGGGAGAGT.......................... 21 3 16 0.06 1 0 0 0 0 0 1 0 0 0 0
.......................................CGTAGTAGGCACATTCACC.......................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_621:696-859 - dps_2116 GAATCTGACTAAAG-----ATCGCTTCCTGCGGCGCTATGTGGACCAGGATCCGTGTAAGTGGCACA------------------GCACAAA-----AA--ACGC----------------------------------------------------------------TTTTATAGCATCCATTAAATTCTGAAAACTTCTA-------ACTAGATG--TTCCC--CTGGA------------------------------GATCTTTCTC----------------------------------------ACGTTCAA---------------------------C-AAAATGAAGCCCCTCGCC
droPer2 scaffold_30:32738-32939 + TTGCAAAA---ACT-----ACTGACATCTGCGTTGCC-TGACCAGACGGTTCAGTGTAAC--ACTGGGGCCGGCTCGGC-TGC----TTAAT-----AA--A-------------------ATCCAAATCG------CCTC------------------------------------------------------------------GCATACAAAAA--T-----------ATTTTGTATTTTATTTAATGGCAGCCAAAG----------TCACAGCCAGTGATAAGAGCGAGGGCCAGGAGCCTACCTCCAAGGCAGAGAAAG----------------------------TACCCCCCCTGGA
droWil2 scf2_1100000004909:7478617-7478807 - dwi_2795 TAACCTCAGCAAGG-----ACCGTTTTCTGCGTCGGCATGTAGAACAGGATCCATGTAAGTAGCGAA------------------AGTCAAA-----AAAC--------------------------------TAGT----GGAAGGAATTCCACTCTCTAGTTTACATGTTT-----C-TCTTTTCTTCTGGGG----TGTAATCATTTTGCAGTTG--TGCCG--CTGGA------------------------------GATATTTCTC----------------------------------------ACCTTCAA---------------------------C-AAAATCAAATTGCTTACC
droVir3 scaffold_12822:2934064-2934156 + CGGTAAAT--AAAGCGCATGTCACGTTC-AAG-CTGAATGACAAGCAGG-TGCATGAGAAC---------------------------------------------------------------------------------------------------------------------------------------------------GATACGAAAA--TACCA--CATGCATTTTATATTTT----------------------------------------------------------------------ATTT------------------------------------------------A
droMoj3 scaffold_6482:2161351-2161507 - TAATCTCAGCAAGG-----ATCGCTTTTTACGTCGCTATATAGAGAAGGATCCATGTAAGTAAACA------------------------TGTAAAA---C--------------------------------TATGAA-------------------------------TATATATAATAGATTA--TTGTTA---------AT--GTTTGTAGATG--TGCCG--CTAGA------------------------------AATATTTCTG----------------------------------------ACATTCAA---------------------------T-AAAATCAAAACACTTACT
droGri2 scaffold_15203:7052901-7053068 - GAATCTAAGCAAGG-----ACCGCTTTCTGCGTCGCTATGTGGAGCAAGATCCATGTAAGTAGATAAT-------------------------------------------------------------------------------------GCACTTTTGCTTACGCTTTAATAATGTCTGTT-G-TTCTTATTATTG---CC--GATTGAAGACG--TTCCA--CTGGA------------------------------CATATTTCTG----------------------------------------ACGTTCAA---------------------------C-AAAATCAAGACACTCACA
droAna3 scaffold_13266:12963390-12963472 + GCTTAGCAAACAAA-----A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--T-----------ATATTCAATTTCCTTTAATGGCCACCATAAAA------TAGCAGTCAGCAAAAGTAAAGC--CGGCCAAAAGCC-------------------------------------------------------------
droBip1 scf7180000394738:12033-12117 + TCGCAAAT---TTT-----ATTAACATTTGAGTGTG--------------------------------------------TGCGTAGACAAA-----------------------------AGAAAAAAAA------TATAGC--------------------------------------------------A---------AAA--CACAAAG--T--T-----------TTGTGTTATTTT----------------------------------------------------------------------------------------------------GTT-------------------T
droKik1 scf7180000302704:120000-120158 - CAACCTAAGCAAGG-----ACCGTTTCCTGCGACGCTATGTCGACCAGGATCCATGTAAGTGCCCAGCA--CC-CCCAA-ATTCGAGCCAAATGAAA---C--------------------------------TAAGAACGGA------------------------------------------------------------ATT--GTTTCAGATG--TGCCG--CTTGA------------------------------GGTATTTCTC----------------------------------------ACCTTTAA---------------------------C-AAGATCAAGACACTCACA
droFic1 scf7180000454073:2051017-2051114 + TTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAAA----------GCACAGAAAAGGAAAAGGTCGATGGCCAGGAGCCTGCCACCCCGGTGGAAAAACCAGATCCCGTCGCATCCACTG--------------ATCCCG
droEle1 scf7180000491018:134440-134600 - CAATTTGAGTAAGG-----ATCGCTTTCTGCGTCGCTACGTAGAGCAGGATCCATGTAAGTGGGGCA----GGGTGCTC-TTCCCAGCCAAA----ACA--A--------------------C--------GCTAACAACGGG------------------------------------------------------------ATCCCGTTTCAGATG--TGCCC--CTGGA------------------------------GATTTTCCTC----------------------------------------ACGTTCAA---------------------------C-AAAATCAAGACGCTCACC
droRho1 scf7180000774506:8071-8177 + TTTAATGA--AAAC-----ACCGACATTTGAGTGACC----------------------------TAAA-----TAT--ATTAA---------------------------------------------------------------------AAACCTT--------------------ACAAAAT----------------------ATTTAAATAAAAACTTACAGTAACTTTTATGTTTT----------------------------------------------------------------------TTTTGA---------------------------CAGGAGTCA----------A
droBia1 scf7180000301760:5108058-5108134 + AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAAA----------GCACTGAGAAAGAGAAGGGCGAGGGCCAGGAGCCCACCACCCCGGCGGAGAAACCAGATCCG--------------------------------G
droTak1 scf7180000415696:93551-93633 + AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCGCCAAAA----------GCAGCGAGAAGGAGAAGGGCGAGTCCCAGGAGCCGGTGACGCCGGCGGAGAAGTCTGAACCGGCGGCA--------------------------G
droEug1 scf7180000409032:823177-823334 - CAACTTGAGTAAGG-----ATCGCTTTCTGCGGCGCTATGTTGAGCAGGATCCATGTAAGTAACTTGGT-----TGC--TTTACCAGACAAA-----CA--A-------------------CT--------CTTAAACATGGC--------------------------------------------------A---------ATC--CTTTTAGATG--TGCCT--TTAGA------------------------------GGTCTTTCTT----------------------------------------ACCTTCAA---------------------------T-AAGATCAAGACGCTCACC
dm3 chrX:9137904-9137984 + ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGAGAAGGAGAAGGGCGAGGGTCAGGAGCCCGCGACATCAGCGGAGAAACCCGATCCA--------------------------------G
droSim2 x:8684036-8684129 + ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCCCGCGACGTCAGCGGAGAAACCCGATCCAGCCGCACCCACTG-------------------A
droSec2 scaffold_68:25628-25721 + ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCCCGCGACGTCAGCGGAGAAACCCGATCCAGCCTCACCCACTG-------------------A
droYak3 v2_chrUn_547:616-737 - TGTAAGCA----TC-----A---------------------------------------------TA------------------GCATTAA-----AA--ATGCTTTTACAGTGACGTAAATACAAATTA------T---------------ATAGCTT--------------------TGATTAGGTTTTGAA----TTTA-------AGTAATTT--GTCCC--GTAAA------------------------------TTTTGTTCTA----------------------------------------ATGATCGA---------------------------T-AGCGT------------G
droEre2 scaffold_4690:5977162-5977320 - CAACTTGAGCAAGG-----ATCGCTTCCTTAGGCGCTACGTGGAGCAGGATCCATGTGAGTAACTGAGA-----TGC--TTCACTAACCAAC-----AA--A-------------------AC--------CCTAGTTATGGT------------------------------------------------------------ATTCATTTACAGATG--TACCT--CTGGA------------------------------AATCTTTCTC----------------------------------------AGTTTCAA---------------------------C-AAAATCAAGACGCTCACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAATCTGACTAAAG-----ATCGCTTCCTGCGGCGCTATGTGGACCAGGATCCGTGTAAGTGGCACA------------------GCACAAA-----AA--ACGC----------------------------------------------------------------TTTTATAGCATCCATTAAATTCTGAAAACTTCTA-------ACTAGATG--TTCCC--CTGGA------------------------------GATCTTTCTC----------------------------------------ACGTTCAA---------------------------C-AAAATGAAGCCCCTCGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TCTGACTAAAG-----ATCGCTTCCTGC................................................................................................................................................................................................................................................................................................................................................23134.626000000006000
.....TGACTAAAG-----ATCGCTTCCTGCGGCGC...........................................................................................................................................................................................................................................................................................................................................26130.921200000001020
...TCTGACTAAAG-----ATCGCTTCCTGCGGCGC...........................................................................................................................................................................................................................................................................................................................................28130.771000000001000
...TCTGACTAAAG-----ATCGCTTCCT..................................................................................................................................................................................................................................................................................................................................................21130.6990000000900
.............................................................................................................................................................................ATAGCATCCATTAAATTCTGAA............................................................................................................................................................................2220.5010000000010
.................................................................................................................................................................................CATCCATTAAATTCTGAAAAC.........................................................................................................................................................................2120.5010000000010
............................................................................................................................................................................TATAGCATCCATTAAATTCTGA.............................................................................................................................................................................2220.5010000000010
.........TAAAG-----ATCGCTTCCTGCGGCGCTATG.......................................................................................................................................................................................................................................................................................................................................26130.4660000000600
...TCTGACTAAAG-----ATCGCTTCCTG.................................................................................................................................................................................................................................................................................................................................................22130.3850000000500
.................................CGCTATGTGGACCAGGATCCGT........................................................................................................................................................................................................................................................................................................................2230.3310000001000
......................................TGTGGACCAGGATCCGTGTAAGTGGCA..............................................................................................................................................................................................................................................................................................................2730.3310000000100
..........................................................................................................................................................................................AATTCTGAAAACTTCTA-------ACTAG........................................................................................................................................................22120.3340000000400
...TCTGACTAAAG-----ATCGCTTCCTGCGGC.............................................................................................................................................................................................................................................................................................................................................26130.3140000000400
........................................................................................................................................................................................TAAATTCTGAAAACTTCTA-------ACTAG........................................................................................................................................................24120.2530000000300
..........................................................................................................................................................................................AATTCTGAAAACTTCTA-------ACTAGA.......................................................................................................................................................23120.2530000000300
...TCTGACTAAAG-----ATCGCTTCC...................................................................................................................................................................................................................................................................................................................................................20130.2330000000210
.....TGACTAAAG-----ATCGCTTCCTGCGGC.............................................................................................................................................................................................................................................................................................................................................24130.2330000000300
.........................................................................................................................................................................................................................................................................................................................CGTTCAA---------------------------C-AAAATGAAGCCCCTC...23110.1820000000200
............................TGCGGCGCTATGTGGACCAGG..............................................................................................................................................................................................................................................................................................................................21110.1820000002000
.....................................................................................................................................................................................................CTTCTA-------ACTAGATG--TTCCC--CTGG........................................................................................................................................23120.1720200000000
........................................................................................................................................................................................TAAATTCTGAAAACTTCTA-------ACTA.........................................................................................................................................................23120.1720000000200
..........................................................................................................................................................................................AATTCTGAAAACTTCTA-------ACTAGATG--T..................................................................................................................................................26120.1720000000200
.....TGACTAAAG-----ATCGCTTCCTGC................................................................................................................................................................................................................................................................................................................................................21130.1520200000000
........CTAAAG-----ATCGCTTCCTGCGGC.............................................................................................................................................................................................................................................................................................................................................21130.1520000011000
..ATCTGACTAAAG-----ATCGCTTCC...................................................................................................................................................................................................................................................................................................................................................21130.1520000000020
.....TGACTAAAG-----ATCGCTTCCTGCGGCG............................................................................................................................................................................................................................................................................................................................................25130.1520000000200
.............................................................................................................................................................................................................................TCCC--CTGGA------------------------------GATCTTTCTC----------------------------------------AC.....................................................21110.0910100000000
................................GCGCTATGTGGACCAGGATCC..........................................................................................................................................................................................................................................................................................................................21110.0910001000000
..............................................................................................................................................................................................................................................................................TC----------------------------------------ACGTTCAA---------------------------C-AAAATGAAG.........20110.0910100000000
................................GCGCTATGTGGACCAGGATC...........................................................................................................................................................................................................................................................................................................................20110.0910000001000
..............................CGGCGCTATGTGGACCAGG..............................................................................................................................................................................................................................................................................................................................19110.0910100000000
..............................................................................................................................................................................................................................CCC--CTGGA------------------------------GATCTTTCTC----------------------------------------ACGTTCAA---------------------------C-..................27110.0910010000000
...............................................................................................................................................................................................................................................................................................................................A---------------------------C-AAAATGAAGCCCCTCG..18110.0910100000000
............................TGCGGCGCTATGTGGACCAGGATC...........................................................................................................................................................................................................................................................................................................................24110.0910000000010
..............................................................................................................................................................................................................................................................................TC----------------------------------------ACGTTCAA---------------------------C-AAAATGAAGCCCCTCG..27110.0910000001000
............................TGCGGCGCTATGTGGACCAGGAT............................................................................................................................................................................................................................................................................................................................23110.0910000000100
.............................GCGGCGCTATGTGGACCAGG..............................................................................................................................................................................................................................................................................................................................20110.0910100000000
.................................CGCTATGTGGACCAGGATC...........................................................................................................................................................................................................................................................................................................................19110.0910100000000
.....................................................................................................................................................................................CATTAAATTCTGAAAACTTCTA-------AC...........................................................................................................................................................24120.0810000000100
..................................................................................................................................................................................................................ACTAGATG--TTCCC--CTGGA------------------------------GA.......................................................................................................20120.0810100000000
.......................................................................................................................................................................................TTAAATTCTGAAAACTTCTA-------A............................................................................................................................................................21120.0810000000010
........................................................................................................................................................................................TAAATTCTGAAAACTTCTA-------ACTAGA.......................................................................................................................................................25120.0810000000010
.........................TCCTGCGGCGCTATGTGGACC.................................................................................................................................................................................................................................................................................................................................21130.0810010000000
......GACTAAAG-----ATCGCTTCCTGC................................................................................................................................................................................................................................................................................................................................................20130.0810001000000
.......ACTAAAG-----ATCGCTTCCTGCGGCGCT..........................................................................................................................................................................................................................................................................................................................................25130.0810000001000
...........................CTGCGGCGCTATGTGGACC.................................................................................................................................................................................................................................................................................................................................19130.0811000000000
.......ACTAAAG-----ATCGCTTCCTGCGGCGCTATGT......................................................................................................................................................................................................................................................................................................................................29130.0810000001000
..........AAAG-----ATCGCTTCCTGCGGCGC...........................................................................................................................................................................................................................................................................................................................................21130.0810010000000
....CTGACTAAAG-----ATCGCTTCCT..................................................................................................................................................................................................................................................................................................................................................20130.0810000010000
.........................TCCTGCGGCGCTATGTGGAC..................................................................................................................................................................................................................................................................................................................................20130.0810100000000
....CTGACTAAAG-----ATCGCTTCCTG.................................................................................................................................................................................................................................................................................................................................................21130.0810000001000
............AG-----ATCGCTTCCTGCGGCGCT..........................................................................................................................................................................................................................................................................................................................................20130.0810100000000
..........AAAG-----ATCGCTTCCTGCGGC.............................................................................................................................................................................................................................................................................................................................................19130.0810100000000
.........TAAAG-----ATCGCTTCCTGCGGCGCT..........................................................................................................................................................................................................................................................................................................................................23130.0810000000100
...TCTGACTAAAG-----ATCGCTTCCTGA................................................................................................................................................................................................................................................................................................................................................23130.0810000000100
droPer2
TTGCAAAA---ACT-----ACTGACATCTGCGTTGCC-TGACCAGACGGTTCAGTGTAAC--ACTGGGGCCGGCTCGGC-TGC----TTAAT-----AA--A-------------------ATCCAAATCG------CCTC------------------------------------------------------------------GCATACAAAAA--T-----------ATTTTGTATTTTATTTAATGGCAGCCAAAG----------TCACAGCCAGTGATAAGAGCGAGGGCCAGGAGCCTACCTCCAAGGCAGAGAAAG----------------------------TACCCCCCCTGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TAACCTCAGCAAGG-----ACCGTTTTCTGCGTCGGCATGTAGAACAGGATCCATGTAAGTAGCGAA------------------AGTCAAA-----AAAC--------------------------------TAGT----GGAAGGAATTCCACTCTCTAGTTTACATGTTT-----C-TCTTTTCTTCTGGGG----TGTAATCATTTTGCAGTTG--TGCCG--CTGGA------------------------------GATATTTCTC----------------------------------------ACCTTCAA---------------------------C-AAAATCAAATTGCTTACCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................G--TGCCG--CTGGA------------------------------GATATTTCTC----------------------------------------AC.....................................................2320.50110000
........GCAAGG-----ACCGTTTTCTGC................................................................................................................................................................................................................................................................................................................................................1820.50110000
droVir3
CGGTAAAT--AAAGCGCATGTCACGTTC-AAG-CTGAATGACAAGCAGG-TGCATGAGAAC---------------------------------------------------------------------------------------------------------------------------------------------------GATACGAAAA--TACCA--CATGCATTTTATATTTT----------------------------------------------------------------------ATTT------------------------------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TAATCTCAGCAAGG-----ATCGCTTTTTACGTCGCTATATAGAGAAGGATCCATGTAAGTAAACA------------------------TGTAAAA---C--------------------------------TATGAA-------------------------------TATATATAATAGATTA--TTGTTA---------AT--GTTTGTAGATG--TGCCG--CTAGA------------------------------AATATTTCTG----------------------------------------ACATTCAA---------------------------T-AAAATCAAAACACTTACTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GAATCTAAGCAAGG-----ACCGCTTTCTGCGTCGCTATGTGGAGCAAGATCCATGTAAGTAGATAAT-------------------------------------------------------------------------------------GCACTTTTGCTTACGCTTTAATAATGTCTGTT-G-TTCTTATTATTG---CC--GATTGAAGACG--TTCCA--CTGGA------------------------------CATATTTCTG----------------------------------------ACGTTCAA---------------------------C-AAAATCAAGACACTCACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GCTTAGCAAACAAA-----A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--T-----------ATATTCAATTTCCTTTAATGGCCACCATAAAA------TAGCAGTCAGCAAAAGTAAAGC--CGGCCAAAAGCC-------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TCGCAAAT---TTT-----ATTAACATTTGAGTGTG--------------------------------------------TGCGTAGACAAA-----------------------------AGAAAAAAAA------TATAGC--------------------------------------------------A---------AAA--CACAAAG--T--T-----------TTGTGTTATTTT----------------------------------------------------------------------------------------------------GTT-------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
CAACCTAAGCAAGG-----ACCGTTTCCTGCGACGCTATGTCGACCAGGATCCATGTAAGTGCCCAGCA--CC-CCCAA-ATTCGAGCCAAATGAAA---C--------------------------------TAAGAACGGA------------------------------------------------------------ATT--GTTTCAGATG--TGCCG--CTTGA------------------------------GGTATTTCTC----------------------------------------ACCTTTAA---------------------------C-AAGATCAAGACACTCACASizeHit CountTotal NormTotal
No Reads
droFic1
TTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAAA----------GCACAGAAAAGGAAAAGGTCGATGGCCAGGAGCCTGCCACCCCGGTGGAAAAACCAGATCCCGTCGCATCCACTG--------------ATCCCGSizeHit CountTotal NormTotal
No Reads
droEle1
CAATTTGAGTAAGG-----ATCGCTTTCTGCGTCGCTACGTAGAGCAGGATCCATGTAAGTGGGGCA----GGGTGCTC-TTCCCAGCCAAA----ACA--A--------------------C--------GCTAACAACGGG------------------------------------------------------------ATCCCGTTTCAGATG--TGCCC--CTGGA------------------------------GATTTTCCTC----------------------------------------ACGTTCAA---------------------------C-AAAATCAAGACGCTCACCSizeHit CountTotal NormTotal
No Reads
droRho1
TTTAATGA--AAAC-----ACCGACATTTGAGTGACC----------------------------TAAA-----TAT--ATTAA---------------------------------------------------------------------AAACCTT--------------------ACAAAAT----------------------ATTTAAATAAAAACTTACAGTAACTTTTATGTTTT----------------------------------------------------------------------TTTTGA---------------------------CAGGAGTCA----------ASizeHit CountTotal NormTotal
No Reads
droBia1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAAA----------GCACTGAGAAAGAGAAGGGCGAGGGCCAGGAGCCCACCACCCCGGCGGAGAAACCAGATCCG--------------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCGCCAAAA----------GCAGCGAGAAGGAGAAGGGCGAGTCCCAGGAGCCGGTGACGCCGGCGGAGAAGTCTGAACCGGCGGCA--------------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
CAACTTGAGTAAGG-----ATCGCTTTCTGCGGCGCTATGTTGAGCAGGATCCATGTAAGTAACTTGGT-----TGC--TTTACCAGACAAA-----CA--A-------------------CT--------CTTAAACATGGC--------------------------------------------------A---------ATC--CTTTTAGATG--TGCCT--TTAGA------------------------------GGTCTTTCTT----------------------------------------ACCTTCAA---------------------------T-AAGATCAAGACGCTCACCSizeHit CountTotal NormTotal
No Reads
dm3
ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGAGAAGGAGAAGGGCGAGGGTCAGGAGCCCGCGACATCAGCGGAGAAACCCGATCCA--------------------------------GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................ATCGAGAAGGAGAAGGGC...........................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100010000000031020000100000000000000000
.........................................................................................................................................................................................................................................................................................AGGAGAAGGGCGAGGGTC....................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000110000000020000000100000000000000000
...............................................................................................................................................................................................................................................................................................AGGGCGAGGGTCAGGAGCCCGCGAC.......................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAGGAGAAGGGCGAGGGTAGA..................................................................2154.602300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------G..............................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCGAGAAGGAGAAGGGCGAGG.......................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATC..........................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GCCAAGA----------GTATCGAGAAG....................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000001000000000000000
.....A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGAGAAGGAG.................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGA........................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000
.................................................................................................................................................................................................................................................................................TATCGAGAAGGAGAAGGGC...........................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................GCTGCCAAGA----------GTATCGAGAAGGA..................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGGAGCCCGCGACATCAGCGGAG.............................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................AGGGCGAGGGTCAGGAGC..............................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000
.....A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGAGAA.....................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................TGCCAAGA----------GTATCGAGAAGGAGAA...............................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GA----------GTATCGAGAAGGAGAA...............................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAGGAGAAGGGCGAGGGTAG...................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GACATCAGCGGAGAAACCCGA.....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................................ATCGAGAAGGAGAAGGGCG..........................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................A----------GTATCGAGAAGGAGAAGG.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................AGAAGGGCGAGGGTCAGGAGCC.............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................................................................................................GTATCGAGAAGGAGAAGGGC...........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................CCAAGA----------GTATCGAGAAGG...................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGA........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................AAGA----------GTATCGAGAAGGAGAAGGG............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GCCAAGA----------GTATCGAGAAGGAGA................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGA----------GTATCGAGAAGGAGAAGGGCG..........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGGGTCAGGAGCCCGCGACATCAGCGG...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................GAGAAGGAGAAGGGCGAG........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................AGGGCGAGGGTCAGGAGCCCGCGA........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGGAGCCCGCGACATCAGCG................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..TCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGAGAA.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................AGGAGAAGGGCGAGGGTCA...................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GA----------GTATCGAGAAGGAGAAGGG............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................................................................GACATCAGCGGAGAAACCCGAT....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................................................................................................GCTGCCAAGA----------GTATCGAGAAGG...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................GGCTGCCAAGA----------GTATCGAGAAG....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................................................................................................................GGGCGAGGGTCAGGAGCC.............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CTGCCAAGA----------GTATCGAGAAGGA..................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CGAGGGTCAGGAGCCCGCGAC.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GAGAAGGAGAAGGGCGAGGGTCA...................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGGAGCCCGCGACATCAGC.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................................................................................................................................CGACATCAGCGGAGAAACCCGA.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCG.........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCGAGAAG....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTCAGGAGCCCGCGACATCAGCGGA..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................GGCTGCCAAGA----------GTATCGAG.......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GAGGGTCAGGAGCCCGCGAC.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGGGCGAGGGTCAGGAGCCCGCGTG.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AAGA----------GTATCGAGAAGGAGAAGGGC...........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................GCCAAGA----------GTATCGAGAAGGA..................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GCCAAGA----------GTATCGAGAAGGAG.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................................................................GACATCAGCGGAGAAACCCG......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GAAGGAGAAGGGCGAGGGT.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................................................................................................AGGAGAAGGGCGAGGGTCAGGA................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGCTGCCAAGA----------GTATCGAG.......................................................................................2011.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGGAGCCCGCGACATCAGCGG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTATCG.........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GTA............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TGCCAAGA----------GTATCGAGAAGGA..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GCCAAGA----------GTATCGAGAAGGAGAAGGG............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGGAGAAGGGCGAGGGC.....................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGGAGAAGGGCGAGGGTAGA..................................................................20110.3640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAGGAGAAGGGCGAGGT......................................................................1740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCCCGCGACGTCAGCGGAGAAACCCGATCCAGCCGCACCCACTG-------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................TCTGGAGCCCGCGACGTCAGCGGAG.............................................2511.00100000000010000000
.............................................................................................................................................................................................................................................................CTGCCAAGA----------GCACGGAGAAGG...................................................................................2111.00100000001000000000
....................................................................................................................................................................................................................................................................................................................CGACGTCAGCGGAGAAACCCGATC...................................2411.00100000001000000000
....AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GCACGGAG.......................................................................................2211.00100010000000000000
droSec2
ACTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTGCCAAGA----------GCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCCCGCGACGTCAGCGGAGAAACCCGATCCAGCCTCACCCACTG-------------------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................AGGAGAAGGGCGAGGGTCTGGAGC..............................................................2411.0010001
droYak3
TGTAAGCA----TC-----A---------------------------------------------TA------------------GCATTAA-----AA--ATGCTTTTACAGTGACGTAAATACAAATTA------T---------------ATAGCTT--------------------TGATTAGGTTTTGAA----TTTA-------AGTAATTT--GTCCC--GTAAA------------------------------TTTTGTTCTA----------------------------------------ATGATCGA---------------------------T-AGCGT------------GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CAACTTGAGCAAGG-----ATCGCTTCCTTAGGCGCTACGTGGAGCAGGATCCATGTGAGTAACTGAGA-----TGC--TTCACTAACCAAC-----AA--A-------------------AC--------CCTAGTTATGGT------------------------------------------------------------ATTCATTTACAGATG--TACCT--CTGGA------------------------------AATCTTTCTC----------------------------------------AGTTTCAA---------------------------C-AAAATCAAGACGCTCACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:04 AM