ID:

dps_2115

 Coordinate:

Unknown_group_621:520-570 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.0 -8.6 -8.6

Flybase annnotation

exon [dpse_GLEANR_7026:2]; CDS [Dpse\GA27847-cds]; exon [dpse_GLEANR_7026:3]; CDS [Dpse\GA27847-cds]; intron [Dpse\GA27847-in]

No Repeatable elements found

mature
  1. XL_group1e:1161732-1161752 -
  2. dps_2057  Unknown_group_524:5800-5820 +
  3. dps_2115  Unknown_group_621:550-570 -
  4. Unknown_group_621:2616-2636 -
  5. dps_2119  Unknown_group_621:4738-4758 -
  6. dps_2128  Unknown_group_621:14124-14144 -
  7. dps_2135  Unknown_group_621:18700-18720 -
  8. dps_2142  Unknown_group_621:25422-25442 +
  9. dps_2147  Unknown_group_621:30659-30679 +
star
  1. dps_2057  Unknown_group_524:5818-5837 +
  2. dps_2115  Unknown_group_621:526-545 -
  3. Unknown_group_621:2592-2611 -
  4. dps_2119  Unknown_group_621:4714-4733 -
  5. dps_2128  Unknown_group_621:14107-14126 -
  6. dps_2135  Unknown_group_621:18683-18702 -
  7. dps_2142  Unknown_group_621:25440-25459 +
  8. dps_2147  Unknown_group_621:30677-30696 +

Sense Strand Reads

##################################################---------------------------------------------------##################################################
CGCCGCAAGATCAAGATGCCCGACCAGCGCGACGTCAATGACAAGACGCTGTATGTGGAGGCCCTGCCGGCTGAAGGCTGAAGGCTGAAGGAAGTCTTCAGTCGCTATGGCCCTGTGGCCTATGTATCGCTGCCTCACTACCCAGGCACCA
**************************************************.........((((..(((.......)))....)))).........******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 V112
male body		 SRR902011
testis
 M040
female body
 GSM444067
head
 M059
embryo
 M062
head
 SRR902012
CNS imaginal disc
 GSM343916
embryo
....................................AATGACAAGACGCTGTATGTGGAGGC......................................................................................... 26 0 11 13.09 144 143 0 1 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGGA............................................................................................ 23 0 11 4.45 49 49 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGG............................................................................................. 22 0 11 3.18 35 35 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGGAGG.......................................................................................... 25 0 11 2.73 30 30 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGGAG........................................................................................... 24 0 11 1.55 17 17 0 0 0 0 0 0 0 0
..........TCAAGATGCCCGACCAGCGCGT....................................................................................................................... 22 1 3 0.67 2 0 2 0 0 0 0 0 0 0
..........................................AAGACGCTGTATGTGGAGGC......................................................................................... 20 0 11 0.55 6 1 2 3 0 0 0 0 0 0
.........................................CAAGACGCTGTATGTGGAGGC......................................................................................... 21 0 11 0.45 5 0 2 1 0 1 1 0 0 0
.................................................TGTATGTGGAGGCCCTGCCGG................................................................................. 21 0 10 0.40 4 4 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTG.............................................................................................. 21 0 11 0.36 4 4 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGGGGGC......................................................................................... 26 1 11 0.36 4 4 0 0 0 0 0 0 0 0
......................................TGACAAGACGCTGTATGTGGAGGCCC....................................................................................... 26 0 11 0.36 4 2 0 2 0 0 0 0 0 0
.........................AGCGCGACGTCAATGACAAGA......................................................................................................... 21 0 11 0.36 4 1 1 2 0 0 0 0 0 0
..................................................GTATGTGGAGGCCCTGCCGGC................................................................................ 21 0 9 0.33 3 0 0 3 0 0 0 0 0 0
...CGCAAGATCAAGATGCCCGAC............................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..........................................................................AGGCTGAAGGCTGAAGGAAG......................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0
................................................................TGCCGGCTGAAGGCTGAAGGC.................................................................. 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0
.......................................................................TGAAGGCTGAAGGCTGAAGGAAGTC....................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0
.......GGATCAAGATGCCCGACCAGC........................................................................................................................... 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0
.....CAGGATCAAGATGCCCGACC.............................................................................................................................. 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0
..................................TCAATGACAAGACGCTGTATGTGGA............................................................................................ 25 0 11 0.27 3 3 0 0 0 0 0 0 0 0
...................................CAATGACAAGACGCTGTATG................................................................................................ 20 0 11 0.27 3 0 0 3 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATG................................................................................................ 19 0 11 0.27 3 3 0 0 0 0 0 0 0 0
.....................................ATGACAAGACGCTGTATGTGGAG........................................................................................... 23 0 11 0.27 3 3 0 0 0 0 0 0 0 0
...................................................TATGTGGAGGCCCTGCCGGCTGAAG........................................................................... 25 0 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................................................AAGTCTTCAGTCGCTATGGCC....................................... 21 0 9 0.22 2 0 2 0 0 0 0 0 0 0
........................................................................................................................TATGTATCGCTGCCTCACTA........... 20 0 9 0.22 2 0 0 1 0 0 0 0 1 0
......................................................................................GAAGGAAGTCTTCAGTCGCTA............................................ 21 0 9 0.22 2 0 0 0 1 0 0 1 0 0
...............................................................................................CTTCAGTCGCTATGGCCCTGT................................... 21 0 9 0.22 2 0 1 0 0 1 0 0 0 0
................................................................................................TTCAGTCGCTATGGCCCTGTG.................................. 21 0 9 0.22 2 0 0 0 2 0 0 0 0 0
.................GCCCGACCAGCGCGACGTCAATGACA............................................................................................................ 26 0 11 0.18 2 0 0 2 0 0 0 0 0 0
.......................................GACAAGACGCTGTATGTGGAG........................................................................................... 21 0 11 0.18 2 0 2 0 0 0 0 0 0 0
................................CGTCAATGACAAGACGCTGTATGTGGA............................................................................................ 27 0 11 0.18 2 0 0 2 0 0 0 0 0 0
...................................................................................................AGTCGCTATGGCCCTGTGGC................................ 20 0 11 0.18 2 0 0 0 1 0 1 0 0 0
................TGCCCGACCAGCGCGACGTCA.................................................................................................................. 21 0 11 0.18 2 0 2 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGT............................................................................................... 20 0 11 0.18 2 2 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTAA................................................................................................. 18 1 11 0.18 2 2 0 0 0 0 0 0 0 0
............................................GACGCTGTATGTGGAGGCC........................................................................................ 19 0 11 0.18 2 0 1 0 1 0 0 0 0 0
....................................AATGATAAGACGCTGTATGTGGA............................................................................................ 23 1 11 0.18 2 2 0 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGGAA........................................................................................... 24 1 11 0.18 2 2 0 0 0 0 0 0 0 0
..........................................AAGACGCTGTATGTGGAGGCC........................................................................................ 21 0 11 0.18 2 0 1 1 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGTGGAGGCC........................................................................................ 27 0 11 0.18 2 2 0 0 0 0 0 0 0 0
........................................ACAAGACGCTGTATGTGGAGG.......................................................................................... 21 0 11 0.18 2 0 1 0 0 1 0 0 0 0
..................................TCAATGACAAGACGCTGTATG................................................................................................ 21 0 11 0.18 2 0 0 2 0 0 0 0 0 0
...................................................................CGGCTGAAGGCTGAAGGCTCC............................................................... 21 2 6 0.17 1 0 0 1 0 0 0 0 0 0
.....................................................................GCTGAAGGCTGAAGGCTGAAG............................................................. 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0
...................................................TATGTGGAGGCCCTGCCGGCT............................................................................... 21 0 8 0.13 1 0 1 0 0 0 0 0 0 0
..........................................................AGGCCCTGCCGGCTGAAGG.......................................................................... 19 0 8 0.13 1 0 0 0 1 0 0 0 0 0
..........................................................AGGCCCTGCCGGCTGAGGGC......................................................................... 20 1 8 0.13 1 0 0 0 0 0 0 1 0 0
.........................................................GAGGCCCTGCCGGCTGAAGGC......................................................................... 21 0 8 0.13 1 0 0 0 0 1 0 0 0 0
.....................................................TGTGGAGGCCCTGCCGGCTG.............................................................................. 20 0 8 0.13 1 0 0 0 1 0 0 0 0 0
...........................................................................GGCTGAAGGCTGAAGGAAGT........................................................ 20 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.............................................................................CTGAAGGCTGAAGGAAGTCTT..................................................... 21 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.......................................................TGGAGGCCCTGCCGGCTGAAGG.......................................................................... 22 0 8 0.13 1 0 0 0 0 0 0 1 0 0
.................................................TGTATGTGGAGGCCCTGCCGGCT............................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................TTGAGGCCCTGCCGGCTGAAGG.......................................................................... 22 1 8 0.13 1 0 0 0 0 0 1 0 0 0
....................................................ATGTGGAGGCCCTGCCGGCTT.............................................................................. 21 1 8 0.13 1 0 1 0 0 0 0 0 0 0
...............ATGCCCGACCGGCGCGACGAC................................................................................................................... 21 2 9 0.11 1 0 0 0 0 0 1 0 0 0
...............................................................................................................CCTGTGGCCTATGTATCGCTG................... 21 0 9 0.11 1 0 0 0 1 0 0 0 0 0
....................................................ATGTGGAGGCCCTGCCGGC................................................................................ 19 0 9 0.11 1 0 0 0 1 0 0 0 0 0
..............................................................................................TCTTCAGTCGCTGTGGCCCT..................................... 20 1 9 0.11 1 0 1 0 0 0 0 0 0 0
...............ATGCCCGACCAGCGCGACGTC................................................................................................................... 21 0 9 0.11 1 0 0 0 1 0 0 0 0 0
.............................................................................................GTCTTCAGTCGCTATGGCCC...................................... 20 0 9 0.11 1 0 1 0 0 0 0 0 0 0
.................................................................................................TCAGTCGCTATGGCCCTGTG.................................. 20 0 9 0.11 1 0 0 1 0 0 0 0 0 0
...................................................................................................................TGGCCTATGTATCGCTGCCTC............... 21 0 9 0.11 1 0 0 0 1 0 0 0 0 0
..............GATGCCCGACCAGCGCGACGT.................................................................................................................... 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0
................................................................................................................CTGTGGCCTATGTATCGCT.................... 19 0 9 0.11 1 0 0 0 0 0 0 0 0 1
.................................................................................................................TGTGGCCTATGTATCGCTG................... 19 0 9 0.11 1 0 0 1 0 0 0 0 0 0
...................................................................................................AGTCGCTATGGCCCTGTGTCC............................... 21 1 9 0.11 1 0 0 0 0 1 0 0 0 0
...........CAAGATGCCCGACCAGCGCGA....................................................................................................................... 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0
..................................................CTATGTGGAGGCCCTGCCGGC................................................................................ 21 1 9 0.11 1 0 0 1 0 0 0 0 0 0
.......................................................................................................GCTATGGCCCTGTGGCCAAA............................ 20 2 9 0.11 1 0 0 0 1 0 0 0 0 0
..............................................................................................TCTTCAGTCGCTATGGCCCTGTG.................................. 23 0 9 0.11 1 0 0 0 1 0 0 0 0 0
...........................................................................................................TGGCCCTGTGGCCTATGTATCG...................... 22 0 9 0.11 1 0 0 0 0 1 0 0 0 0
.............................................................................................................GCCCTGTGGCCTATGTATCGT..................... 21 1 9 0.11 1 0 0 0 1 0 0 0 0 0
........................................................................................AGGAAGTCTTCAGTCGCTATG.......................................... 21 0 9 0.11 1 0 0 0 1 0 0 0 0 0
...........................................................................................AAGTCTTCAGTCGCTATGGC........................................ 20 0 9 0.11 1 0 1 0 0 0 0 0 0 0
...........................................AGACGCTGTATGTGGAGGCCCTGCCGGC................................................................................ 28 0 9 0.11 1 1 0 0 0 0 0 0 0 0
..................................................GTATGTGGAGGCCCTGCCGT................................................................................. 20 1 10 0.10 1 0 1 0 0 0 0 0 0 0
...................................................TATGTGGAGGCCCTGCCGG................................................................................. 19 0 10 0.10 1 0 0 0 0 1 0 0 0 0
.........................................CAAGACGCTGGATGTGGAGGC......................................................................................... 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0
..............................GACGTCAATGACAAGACGCT..................................................................................................... 20 0 11 0.09 1 0 0 0 1 0 0 0 0 0
....................................AATGACAAGACGCTGTATGGGGAGG.......................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0
............................................GACGCTGTATGTGGAGGC......................................................................................... 18 0 11 0.09 1 0 0 1 0 0 0 0 0 0
.....................................ATGACAAGACGCTGTATGTGGAGGC......................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0 0 0 0
.............................TGACGTCAATGACAGGACGC...................................................................................................... 20 2 11 0.09 1 0 0 0 0 0 0 1 0 0
..................................................GTATGTGGAGGCCCTGCC................................................................................... 18 0 11 0.09 1 0 0 0 1 0 0 0 0 0
..........................................AAGACGCTGTATGTGGAGG.......................................................................................... 19 0 11 0.09 1 0 0 0 1 0 0 0 0 0
.....................................ATGACAAGACGCTGTATGTGG............................................................................................. 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0
...........................................AGACGCTGTATGTGGAGGCC........................................................................................ 20 0 11 0.09 1 0 0 0 0 1 0 0 0 0
...................................................................................................AGTCGCTATGGCCCTGCGG................................. 19 1 11 0.09 1 1 0 0 0 0 0 0 0 0
........................CAGCGCGACGTCAATGACAAG.......................................................................................................... 21 0 11 0.09 1 0 0 1 0 0 0 0 0 0
......................................TGACAAGACGCTGAATGTGGAGGC......................................................................................... 24 1 11 0.09 1 0 0 1 0 0 0 0 0 0
.........................................CAAGACGCTGTATGTGGAGG.......................................................................................... 20 0 11 0.09 1 0 0 0 0 1 0 0 0 0
....................................AATGACAAGACGCTGTATATGGAGGC......................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0
..............................................CGCTGTATGTGGAGGCCCTGC.................................................................................... 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0
............................................GACGCTGTATGTGGAGGCCCC...................................................................................... 21 1 11 0.09 1 0 1 0 0 0 0 0 0 0
...............................................GCTGTATGTGGAGGCCCTG..................................................................................... 19 0 11 0.09 1 0 1 0 0 0 0 0 0 0
....................................AATGACAAGACGCTGTATGGGGA............................................................................................ 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0
............................................GACGCTGTATGTGGAGGCCT....................................................................................... 20 1 11 0.09 1 0 0 0 1 0 0 0 0 0
...........................................AGACGCTGTATGTGGAGGC......................................................................................... 19 0 11 0.09 1 0 0 1 0 0 0 0 0 0
...................................CAATGACAAGACGCTGTATGTGGAGGCC........................................................................................ 28 0 11 0.09 1 0 0 0 0 0 0 0 1 0
............................................................................GCTGAAGGCTCACGGAAG......................................................... 18 2 11 0.09 1 0 0 0 1 0 0 0 0 0
....................................AATGACAAGATGCTGTATGTGGAGGC......................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0
.........................AGCGCGACGTCAATGAATAGA......................................................................................................... 21 2 11 0.09 1 0 0 0 0 1 0 0 0 0
.......................CCAGCGCGACGTCAATGAC............................................................................................................. 19 0 11 0.09 1 0 1 0 0 0 0 0 0 0
.......................................GACAAGACGCTGTATGTGGAGT.......................................................................................... 22 1 11 0.09 1 0 1 0 0 0 0 0 0 0
.............................CGACGTCAATGACAAGACGC...................................................................................................... 20 0 11 0.09 1 0 0 0 0 1 0 0 0 0
............................................GACGCTGTATGTGGAGGCCC....................................................................................... 20 0 11 0.09 1 0 0 0 0 0 1 0 0 0
.......................CCAGCGCGACGTCAATGACA............................................................................................................ 20 0 11 0.09 1 0 0 0 0 1 0 0 0 0
......................................TGACAAGACGCTGTATGTGGAGGC......................................................................................... 24 0 11 0.09 1 0 0 1 0 0 0 0 0 0
..............................................CGCTGTGTGTGGAGGCCCTG..................................................................................... 20 1 11 0.09 1 0 0 0 1 0 0 0 0 0
..................................TCAATAACCCGACGCTGTAT................................................................................................. 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0
.......................................GGCAAGACGCTGCATGTCGAG........................................................................................... 21 3 13 0.08 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GCGGCGTTCTAGTTCTACGGGCTGGTCGCGCTGCAGTTACTGTTCTGCGACATACACCTCCGGGACGGCCGACTTCCGACTTCCGACTTCCTTCAGAAGTCAGCGATACCGGGACACCGGATACATAGCGACGGAGTGATGGGTCCGTGGT
********************************************************.........((((..(((.......)))....)))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 V112
male body		 SRR902011
testis
 M040
female body
 GSM343916
embryo
 M059
embryo
 M062
head
 M022
male body		 GSM444067
head
 SRR902012
CNS imaginal disc
.....................CTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 25 0 11 21.45 236 236 0 0 0 0 0 0 0 0 0
......................TGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 24 0 11 18.36 202 201 0 1 0 0 0 0 0 0 0
.......................GGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 23 0 11 13.91 153 153 0 0 0 0 0 0 0 0 0
........................GTCGCGCTGCAGTTACTGTTCT......................................................................................................... 22 0 11 3.09 34 33 0 1 0 0 0 0 0 0 0
...............................................................................................GAAGTCAGCGATACCGGGACACCGGAT............................. 27 0 9 1.44 13 13 0 0 0 0 0 0 0 0 0
.CGGCGTTCTAGTTCTACGGGCTGGT............................................................................................................................. 25 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0
..AAAGTTCTAGTTCTACGGGCTGGT............................................................................................................................. 24 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
GCGGCGTTCTAGTTCTACGGGCTGGT............................................................................................................................. 26 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................CCGACTTCCTTCAGAAGTCAGCGATA........................................... 26 0 9 1.00 9 9 0 0 0 0 0 0 0 0 0
.......................................................................................TTCCTTCAGAAGTCAGCGATA........................................... 21 0 9 0.89 8 0 1 6 1 0 0 0 0 0 0
....................GCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 26 0 11 0.73 8 8 0 0 0 0 0 0 0 0 0
.............................................................................................CAGAAGTCAGCGATACCGGGACACCGGAT............................. 29 0 9 0.67 6 6 0 0 0 0 0 0 0 0 0
.................................................ACATACACCTCCGGGACGGCCGACT............................................................................. 25 0 8 0.63 5 5 0 0 0 0 0 0 0 0 0
...................................................................................CGACTTCCTTCAGAAGTCAGCGATA........................................... 25 0 9 0.56 5 5 0 0 0 0 0 0 0 0 0
....................................................................................GACTTCCTTCAGAAGTCAGCGATA........................................... 24 0 9 0.56 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................CAGAAGTCAGCGATACCGGGA..................................... 21 0 9 0.56 5 0 0 5 0 0 0 0 0 0 0
.....................................................................................................................CGGATACATAGCGACGGAGTGATGGGT....... 27 0 9 0.56 5 5 0 0 0 0 0 0 0 0 0
.................CGGGCTGGTCGCGCTGCAGT.................................................................................................................. 20 0 11 0.55 6 1 4 0 0 0 0 0 0 0 1
.......................GGTCGCGCTGCAGTTACTGTT........................................................................................................... 21 0 11 0.45 5 1 1 3 0 0 0 0 0 0 0
..................GGGCTGGTCGCGCTGCAGTTA................................................................................................................ 21 0 11 0.45 5 0 1 4 0 0 0 0 0 0 0
.....................TTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 25 1 11 0.45 5 5 0 0 0 0 0 0 0 0 0
....................ACTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 26 1 11 0.45 5 5 0 0 0 0 0 0 0 0 0
..........................CGCGCTGCAGTTACTGTTCT......................................................................................................... 20 0 11 0.45 5 5 0 0 0 0 0 0 0 0 0
...............................................CGACATACACCTCCGGGACGGCCGACT............................................................................. 27 0 8 0.38 3 3 0 0 0 0 0 0 0 0 0
...................GGCTGGTCGCGCTGCAGTTA................................................................................................................ 20 0 11 0.36 4 0 4 0 0 0 0 0 0 0 0
...........................GCGCTGCAGTTACTGTTCTGC....................................................................................................... 21 0 11 0.36 4 0 1 3 0 0 0 0 0 0 0
..GGCGTTCTAGTTCTACGGGCT................................................................................................................................ 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
GCGGCGTTCTAGTTCTACGGG.................................................................................................................................. 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.CGGCGTTCTAGTTCTACGGGC................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......TCTAGTTCTACGGGCTGGTCGCGC........................................................................................................................ 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.................................................................................TCCGACTTCCTTCAGAAGTCAGCGATA........................................... 27 0 9 0.33 3 3 0 0 0 0 0 0 0 0 0
....................................................................................GACTTCCTTCAGAAGTCAGCGATAC.......................................... 25 0 9 0.33 3 3 0 0 0 0 0 0 0 0 0
..GGCGTTCTAGTTCTACGGGCTGGT............................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................GGCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 27 0 11 0.27 3 3 0 0 0 0 0 0 0 0 0
.........................TCGCGCTGCAGTTACTGTTCT......................................................................................................... 21 0 11 0.27 3 2 1 0 0 0 0 0 0 0 0
.....................ATGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 25 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0
.................................CAGTTACTGTTCTGCGACATA................................................................................................. 21 0 11 0.27 3 0 2 0 0 0 0 0 1 0 0
............................................................CGGGACGGCCGACTTCCGACT...................................................................... 21 0 8 0.25 2 0 1 0 0 1 0 0 0 0 0
......................................................CACCTCCGGGACGGCCGACTT............................................................................ 21 0 8 0.25 2 0 2 0 0 0 0 0 0 0 0
.........................................................................................CCTTCAGAAGTCAGCGATAC.......................................... 20 0 9 0.22 2 0 0 2 0 0 0 0 0 0 0
.....................................................................................................AGCGATACCGGGACACCGGATACAT......................... 25 0 9 0.22 2 1 0 0 1 0 0 0 0 0 0
..........................................................................................CTTCAGAAGTCAGCGATACCGGGAC.................................... 25 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................GGATACATAGCGACGGAGTGATGGGT....... 26 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................CGGATACATAGCGACGGAGTGAT........... 23 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
............................................................................................................................ATAGCGACGGAGTGATGGGTCCG.... 23 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................CCTTCAGAAGTCAGCGATACC......................................... 21 0 9 0.22 2 0 1 1 0 0 0 0 0 0 0
................................................................................................................GACACCGGATACATAGCGACG.................. 21 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0
.....................................................................................ACTTCCTTCAGAAGTCAGCGATAC.......................................... 24 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................TACATAGCGACGGAGTGATGGGTCC..... 25 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
............................................................................................TCAGAAGTCAGCGATACCGGGACACCG................................ 27 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGCAGTTGCTGTTCT......................................................................................................... 25 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.................AGGTCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 29 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
....................GCTGGTCGCGCTGCAGTTA................................................................................................................ 19 0 11 0.18 2 0 1 1 0 0 0 0 0 0 0
.................CGGGCTGGTCGCGCTGCAGTTAC............................................................................................................... 23 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.......................GGTCGCGCTGCAGTTACTGT............................................................................................................ 20 0 11 0.18 2 1 1 0 0 0 0 0 0 0 0
....................ACTGGTCGCGCTGCAGTTACTGT............................................................................................................ 23 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
....................TTTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 26 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGCAGTTACTGT............................................................................................................ 22 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
......................TGGTCGCGCTGCAGTTACTGTT........................................................................................................... 22 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...........................GCGCTGCAGTTACTGTTCTG........................................................................................................ 20 0 11 0.18 2 0 0 2 0 0 0 0 0 0 0
.................AAGTCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 29 3 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.....................CGGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 25 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
..................GGGCTGGTCGCGCTGCAGT.................................................................................................................. 19 0 11 0.18 2 0 1 0 0 1 0 0 0 0 0
..................TAGCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 28 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGCAGTTACTGTTC.......................................................................................................... 24 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
......................TGGTCGCGCTGCAGTTACTGT............................................................................................................ 21 0 11 0.18 2 0 0 0 1 0 0 0 1 0 0
.....................CTGGTCGCGCTGCAGTTACTG............................................................................................................. 21 0 11 0.18 2 1 0 1 0 0 0 0 0 0 0
.......................GGTCGCGCTGCAGTTACTCTCT.......................................................................................................... 22 3 12 0.17 2 2 0 0 0 0 0 0 0 0 0
.............................................................GGGACGGCCGACTTCCGACT...................................................................... 20 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0
..........................................................TCCGGGACGGCCGACTTCCG......................................................................... 20 0 8 0.13 1 0 0 0 0 0 0 0 0 1 0
............................................................CGGGACGGCCGACTTCCGACTTC.................................................................... 23 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0
............................................................CGGGACGGCCGACTTCCGACTT..................................................................... 22 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0
..............................................................GGACGGCCGACTTCCGACTTC.................................................................... 21 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0
...........................................................................CCGACTTCCGACTTCCTTCA........................................................ 20 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0
........................................................CCTCCGGGGCGGCCGACTTC........................................................................... 20 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0
..................................................CATACACCTCCGGGACGGCCGACT............................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
............................................................CGGGGCGGCCGACTTCCGAC....................................................................... 20 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0
.............................................................................GACTTCCGACTTCCTTCAGAA..................................................... 21 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0
..........................................................TCCGGGGCGGCCGACTTCCGA........................................................................ 21 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0
......................................................................................CTTCCTTCAGAAGTCAGCGAT............................................ 21 0 9 0.11 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................GATACATAGCGACGGAGTGAT........... 21 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................ACCGGATACATAGCGACGGA................ 20 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................TACATAGCGACGGAGTGATGGGTC...... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
......................................................................................TTTCCTTCAGAAGTCAGCGATA........................................... 22 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................ATGCCGGGAGACCGCATACAT......................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................CTTCAGAAGTCAGCGATACC......................................... 20 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0
...............TACGGGCTGGTCGCGCTGCAGTTACTGT............................................................................................................ 28 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................CAGCGATACCGGGACACCGGATACAT......................... 26 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................GTCAGCGATACCGGGACACCGGAT............................. 24 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................TACATAGCGACGGAGTGATGGGTCCGTA.. 28 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................AGAAGTCAGCGATACCGGGACACCGGA.............................. 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................TCAGCGATACCGGGACACCGGATACAT......................... 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TCCTCCAGAAGTCAGCGATA........................................... 20 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................GACACCGGATACATAGCGACGGAGTGG............ 27 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................GTCAGCGGTACCGGGACACC................................. 20 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................GATACCGGGACACCGGATACAT......................... 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GGATACATAGAGACGGAGTGA............ 21 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................CCTTCAGAAGTCAGCGATGCC......................................... 21 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0
........................................................................................TCCTTCAGAAGTCAGCGATACCGG....................................... 24 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................GGTACATAGCGACGGAGTGGT........... 21 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................CCTTCAGAAGTCAGCGAT............................................ 18 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TACATGGCGACGGAGTGATGGGTC...... 24 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AACTTCCTTCAGAAGTCAGCGATA........................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................ATAGCGACGGAGTGATGGGTC...... 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
............................................................................................TCAGAAGTCAGCGATACCGGGACA................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GGATACATAGCGACGGAGT.............. 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................CAGAAGTCAGCGATACCGGGACACCGGA.............................. 28 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGTCAGCGATACCGGGACACCGGAT............................. 26 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................GGGACACCGGATACATAGCGA.................... 21 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................AAGAAGTCAGCGATACCGGGA..................................... 21 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
......................................................................................CTTCCTTCGGAAGTCAGCGG............................................. 20 2 9 0.11 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................AGAAGTCAGCGATACCGGGACACCGGAT............................. 28 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GGATACATAGCGACGGAGTGAT........... 22 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
...............TACGGGCTGGTCGCGCTGCAG................................................................................................................... 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
....................GCTGGTCGCGCTGCAGTT................................................................................................................. 18 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................CGACGGAGTGATGGGTCC..... 18 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0
.........................TCGCGCTGCAGTTACTGTT........................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................TGGTCGCGCCGCAGTTACTGTTCT......................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
................................TCAGTTACTGTTCTGCGACAT.................................................................................................. 21 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0
.................CGGGCTGGTCGCGCTGCAGTT................................................................................................................. 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
...........................GCGCTGCAGTTACTGTTCT......................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGCAGTTACT.............................................................................................................. 20 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
..................GGGCTGGTCGCGCTGCAGTT................................................................................................................. 20 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................AGCGACGGAGTGATGGGTCC..... 20 0 11 0.09 1 0 0 1 0 0 0 0 0 0 0
......................TGGTCGCACTGCAGTTACTGTTCT......................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................CGGGATGGTCGCGCTGCAGTT................................................................................................................. 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGCAGTTACTGTTCTTGAA..................................................................................................... 29 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..................AAGATGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 28 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.............................................TGCGACGTACACCTCCGGGAC..................................................................................... 21 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.......................GGTCGCGCCGCAGTTACTGTTCT......................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............................................CTGCGACATACACCTCCGGGA...................................................................................... 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.......................................CTGTTCTGCGACATACACCTC........................................................................................... 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
...................GGCTGGTCGCGCTGGAGTTAC............................................................................................................... 21 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0
.................CGGGCTGGTCGCGCTGCAGTTA................................................................................................................ 22 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0
..................GGGCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 28 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...................GGCTGGTCGCGCTGCAGT.................................................................................................................. 18 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.................GAGTCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 29 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................TTGTCGCGCTGCAGTTACTGTT........................................................................................................... 22 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.................CGGGCCGGTCGCGCTGCAGTT................................................................................................................. 21 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
......................TGGCCGCGCTGCAGTTACTGTTCT......................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...................GGCTGGTCGCGCAGCAGTTACTGTTCT......................................................................................................... 27 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................TAGTCTGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 29 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
....................GCTGGTCGCGCTGCAGTTAC............................................................................................................... 20 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
....................................TTACTGTTCTGCGACATACACC............................................................................................. 22 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.......................GGTCGCGCTGCAGTTACTGTTCA......................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...................GGCTGGTCGCGCTGCAGTTAC............................................................................................................... 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.......................GGTCGCGCGGCAGTTACTGTTCT......................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..........................CGCGCTGCAGTTACTGTTCTG........................................................................................................ 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.................CGGGCTGGTCGCGCTGCAGTTACTGT............................................................................................................ 26 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.............................................TGCGACATACACCTCCGGGAC..................................................................................... 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGAAGTTACTGTTCT......................................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................GGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................AGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.......................GGTCGCGCTGCAGTTACTGTTCC......................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGCAGTTATTGTTCT......................................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................TGGTCGCGTTGCAGTTACTGTTCT......................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................CTGGTCGCGCTGGAGTTACTGTTCT......................................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................AAGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 25 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
....................................TTACTGTTCTGCGACATACAC.............................................................................................. 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.....................CCGGTCGCGCTGCAGTTACTGTTCT......................................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................TAGGGCTGCAGTTACTGT............................................................................................................ 18 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0
...................GGCTGGTCGCGAGGTAGTT................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................GGCGACAGAGTGAGGGGTC...... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_621:470-620 - dps_2115 CGCCGCAAGA--------------------------------------------------------------------------------TCAAG---------ATG---CCC---------------------GACCAGCGCGACGTCAATGACAAGACG-CTGTATGTGGAGGCCCTGC--CGGCTGAAGGCT------GAAGGCTGAAGGAAGTCTTCAGTCGCTATGGCCCTGTGGCCTATGTATCGCTGCCTCACTACCCAGG------------------CACCA
droPer2 scaffold_30:32751-32939 + TGACATCTGC-----GTTGCCTGACCAGACGGTTCAGTGTAACACTGGGGCCGGCTCGGCTGCTTAATAAAATCCAAATCGCCTCGCATACAAAA---------ATATTTTGTATTTTATTTAATGGCAGCCAAA-------------------------GTCACAGCCAGTGATAAGAGCGAGGGCCAGGAGCC-----------------------------------------------TA--CCTCCAAGGCAGAGAAAGT---------ACCCCCC-----CTGGA
droWil2 scf2_1100000004909:7478385-7478541 - CGCCGTAAAA--------------------------------------------------------------------------------CTGCT---------TTG---CCG---------------------AAGCAACGCGATGTAAATGACAGGACT-CTGTATGTGGAGGCCCTGC--CGGCAAATGCCAGCCATGACTGGCTCAAAGAGGTCTTTAGCCGCTATGGACCTGTGGCTTATGTCTCTCTGCCACATTATCCGGG------------------AACGA
droVir3 scaffold_12822:2934077-2934156 + GCATGTCACGTTCAAGCTGAATGACAAGCAGGTGCATGAGAACG-------------------------------------------ATACGAAAATACCACATGCAT------------------------------------------------------------------------------------------------------------------------------------TTTATATTT-------------------------------TATT-----TA
droMoj3 scaffold_6482:2161119-2161275 - CGCCGCAAGA--------------------------------------------------------------------------------CTGCA---------CTG---CCG---------------------GAGCACCGGGACGTCAACAACAAAACC-CTTTATGTTGAGGCTCTGC--CAGCAACTGCAACACATGACTGGCTCAAAGAAGTTTTTGGCCGGTATGGCACGGTCAGCTATGTATCGTTGCCACATTATCCGGG------------------CACGC
droGri2 scaffold_15203:7052669-7052825 - CGTCGTAAGA--------------------------------------------------------------------------------CTGAG---------TTG---CCG---------------------AAACAACGAGACGTCAACGATAAGACG-CTGTATGTCGAGGCGCTGC--CAGCGACGGCAACACACGATTGGCTCAAGGAGGTGTTCAGTCGCTATGGACCGGTTTCGTATGTGTCACTGCCGCACTACCCGGG------------------CACGC
droAna3 scaffold_13266:12963390-12963472 + GCTTAGCAAA--------------------------------------------------------------------------------CAAAA---------TTATATTCAATTTCCTTTAATGGCCACCA---------------------TAAAATAGCAGTCAGCAAAAGTAAAGC--CGGCCAAAAGCC------------------------------------------------------------------------------------------------
droBip1 scf7180000394738:12046-12117 + TAACATTTGA--------------------------------------------------------------------------------GTGTG---------T------------------------GCGTAG-------------------------ACAAAAGAAAAAAAATATAGCAAAACACAAAGTTT-----------------------------------------------TG--TG---------------------------TTATTTTGT-----TT
droKik1 scf7180000302704:119768-119924 - AAACGGAAGA--------------------------------------------------------------------------------CAAAA---------CTG---CCG---------------------AAGCAGCGCGACGTCAACGACAAGACG-CTGTATGTCGAGGCCTTGC--CGGCAAATGCCACCCACGATTGGTTGAAGGAGGTTTTCAGCCGATACGGACCGGTGGCATATGTCTCCCTGCCCCATTACCCCGG------------------CACCA
droFic1 scf7180000454073:2051017-2051114 + TTA-----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAA-------------------------AGCACAGAAAAGGAAAAGGTCGATGGCCAGGAGCC-----------------------------------------------TG--CCACCCCGGTGGAAAAACCAGATCCCGTCGCATCCACTGATCCCG
droEle1 scf7180000491018:134208-134364 - CGGCGCAAGA--------------------------------------------------------------------------------CCAAG---------CTT---CCG---------------------GATCAGCGCGATGTCAACGACAAGACG-CTGTATGTGGAGGCCCTGC--CCGCCAATGCTAGCCACGATTGGTTGAAGGAGGTGTTCAGCCGCTACGGATCGGTGGCCTACGTCTCGCTGCCTCACTATCCGGG------------------CACCA
droRho1 scf7180000774506:8085-8177 + CGACATTTGA--------------------------------------------------------------------------------GTGAC---------CTA---A--------------ATATATTAAA-------------------------AACCTTACAAA--------------------------------------------ATATTTAAATAAAAACTTACAGTAACTTTTATGTTTTT-----TTTGACAGGA------------------GTCAA
droBia1 scf7180000301760:5108058-5108134 + A--------------------------------------------------------------------------------------------------------------------------ATGGCTGCCAAA-------------------------AGCACTGAGAAAGAGAAGGGCGAGGGCCAGGAGCC-----------------------------------------------CA--CCACCCCGGCGGAGAAACCAGA------------------TCCGG
droTak1 scf7180000415696:93551-93633 + A--------------------------------------------------------------------------------------------------------------------------ATGGCCGCCAAA-------------------------AGCAGCGAGAAGGAGAAGGGCGAGTCCCAGGAGCC-----------------------------------------------GG--TGACGCCGGCGGAGAAGTCTGAACCGGC------------GGCAG
droEug1 scf7180000409032:822945-823101 - AAGCGAAAGA--------------------------------------------------------------------------------CCAAA---------CTT---CCG---------------------GATCACCGTGATGTGAACGACAAAACG-CTTTACGTGGAAGCCCTAC--CCGCAAATGCTAGCCATGATTGGCTCAAGGAGGTTTTCAGCCGCTACGGGCCAGTGGCTTACGTCTCACTGCCCCACTATCCGGG------------------CACTA
dm3 chrX:9137904-9137984 + ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGTATCGAGAAGGAGAAGGGCGAGGGTCAGGAGCC-----------------------------------------------CG--CGACATCAGCGGAGAAACCCGAT------------------CCAG
droSim2 x:8684036-8684129 + ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCC-----------------------------------------------CG--CGACGTCAGCGGAGAAACCCGATCCAGCCGCACCCACT-----GA
droSec2 scaffold_68:25628-25721 + ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCC-----------------------------------------------CG--CGACGTCAGCGGAGAAACCCGATCCAGCCTCACCCACT-----GA
droYak3 X:17734035-17734128 + ATTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCTAAA-------------------------AGCACAGAGAAAGAGAAGGGCGAGGGCCAGGAGCC-----------------------------------------------CG--CGACGCCAGCGGAAAAACCCGATCCTGCCGCACCCACC-----GA
droEre2 scaffold_4690:5976930-5977086 - AAGCGACGCA--------------------------------------------------------------------------------CCAAG---------CTT---CCA---------------------GATCAGCGCGATGTCAACGACCAAACC-TTGTATGTTGAGGCTCTGC--CTGCGAATGCCACTCACGATTGGCTGAAGGAGGTTTTCAGCCGCTACGGACCGGTGGCCTATGTCTCCCTGCCCCACTATCCGGG------------------CACAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CGCCGCAAGA--------------------------------------------------------------------------------TCAAG---------ATG---CCC---------------------GACCAGCGCGACGTCAATGACAAGACG-CTGTATGTGGAGGCCCTGC--CGGCTGAAGGCT------GAAGGCTGAAGGAAGTCTTCAGTCGCTATGGCCCTGTGGCCTATGTATCGCTGCCTCACTACCCAGG------------------CACCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGGAGGC...................................................................................................................261113.09144000000014310
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGGA......................................................................................................................23114.454900000004900
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGG.......................................................................................................................22113.183500000003500
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGGAGG....................................................................................................................25112.733000000003000
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGGAG.....................................................................................................................24111.551700000001700
..........................................................................................TCAAG---------ATG---CCC---------------------GACCAGCGCGT..................................................................................................................................................2230.6720000002000
...........................................................................................................................................................AAGACG-CTGTATGTGGAGGC...................................................................................................................20110.5560000002130
..........................................................................................................................................................CAAGACG-CTGTATGTGGAGGC...................................................................................................................21110.4550010012010
...................................................................................................................................................................TGTATGTGGAGGCCCTGC--CGG.........................................................................................................21100.4040000000400
.....................................................................................................................................................AATGACAAGACG-CTGTATGTG........................................................................................................................21110.3640000000400
.......................................................................................................................................................TGACAAGACG-CTGTATGTGGAGGCCC.................................................................................................................26110.3640000000220
..........................................................................................................................................AGCGCGACGTCAATGACAAGA....................................................................................................................................21110.3640000001120
....................................................................................................................................................................GTATGTGGAGGCCCTGC--CGGC........................................................................................................2190.3330000000030
...CGCAAGA--------------------------------------------------------------------------------TCAAG---------ATG---CCC---------------------GAC..........................................................................................................................................................2130.3310000001000
..............................................................................................................................................................................................AGGCT------GAAGGCTGAAGGAAG...........................................................................2030.3310000000010
..................................................................................................................................................................................TGC--CGGCTGAAGGCT------GAAGGC....................................................................................2130.3310000000010
...........................................................................................................................................................................................TGAAGGCT------GAAGGCTGAAGGAAGTC.........................................................................2530.3310000000010
...................................................................................................................................................TCAATGACAAGACG-CTGTATGTGGA......................................................................................................................25110.2730000000300
....................................................................................................................................................CAATGACAAGACG-CTGTATG..........................................................................................................................20110.2730000000030
.....................................................................................................................................................AATGACAAGACG-CTGTATG..........................................................................................................................19110.2730000000300
......................................................................................................................................................ATGACAAGACG-CTGTATGTGGAG.....................................................................................................................23110.2730000000300
.....................................................................................................................................................................TATGTGGAGGCCCTGC--CGGCTGAAG...................................................................................................2580.2520000000200
.....................................................................................................................................................................................................................AAGTCTTCAGTCGCTATGGCC.........................................................2190.2220000002000
..................................................................................................................................................................................................................................................TATGTATCGCTGCCTCACTA.............................2090.2220000000011
................................................................................................................................................................................................................GAAGGAAGTCTTCAGTCGCTA..............................................................2190.2220101000000
.........................................................................................................................................................................................................................CTTCAGTCGCTATGGCCCTGT.....................................................2190.2220000011000
..........................................................................................................................................................................................................................TTCAGTCGCTATGGCCCTGTG....................................................2190.2220200000000
..........................................................................................................G---CCC---------------------GACCAGCGCGACGTCAATGACA.......................................................................................................................................26110.1820000000020
........................................................................................................................................................GACAAGACG-CTGTATGTGGAG.....................................................................................................................21110.1820000002000
.................................................................................................................................................CGTCAATGACAAGACG-CTGTATGTGGA......................................................................................................................27110.1820000000020
.............................................................................................................................................................................................................................AGTCGCTATGGCCCTGTGGC..................................................20110.1820110000000
.........................................................................................................TG---CCC---------------------GACCAGCGCGACGTCA.............................................................................................................................................21110.1820000002000
.....................................................................................................................................................AATGACAAGACG-CTGTATGT.........................................................................................................................20110.1820000000200
.....................................................................................................................................................AATGACAAGACG-CTGTAA...........................................................................................................................18110.1820000000200
.............................................................................................................................................................GACG-CTGTATGTGGAGGCC..................................................................................................................19110.1820100001000
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGGAA.....................................................................................................................24110.1820000000200
...........................................................................................................................................................AAGACG-CTGTATGTGGAGGCC..................................................................................................................21110.1820000001010
.....................................................................................................................................................AATGACAAGACG-CTGTATGTGGAGGCC..................................................................................................................27110.1820000000200
.........................................................................................................................................................ACAAGACG-CTGTATGTGGAGG....................................................................................................................21110.1820000011000
...................................................................................................................................................TCAATGACAAGACG-CTGTATG..........................................................................................................................21110.1820000000020
.......................................................................................................................................................................................CGGCTGAAGGCT------GAAGGCTCC.................................................................................2160.1710000000010
.........................................................................................................................................................................................GCTGAAGGCT------GAAGGCTGAAG...............................................................................2160.1710000001000
.....................................................................................................................................................................TATGTGGAGGCCCTGC--CGGCT.......................................................................................................2180.1310000001000
............................................................................................................................................................................AGGCCCTGC--CGGCTGAAGG..................................................................................................1980.1310100000000
...........................................................................................................................................................................GAGGCCCTGC--CGGCTGAAGGC.................................................................................................2180.1310000010000
.......................................................................................................................................................................TGTGGAGGCCCTGC--CGGCTG......................................................................................................2080.1310100000000
...............................................................................................................................................................................................GGCT------GAAGGCTGAAGGAAGT..........................................................................2080.1310000001000
.................................................................................................................................................................................................CT------GAAGGCTGAAGGAAGTCTT.......................................................................2180.1310000001000
.........................................................................................................................................................................TGGAGGCCCTGC--CGGCTGAAGG..................................................................................................2280.1310001000000
...................................................................................................................................................................TGTATGTGGAGGCCCTGC--CGGCT.......................................................................................................2380.1310000000100
......................................................................................................................................................................ATGTGGAGGCCCTGC--CGGCTT......................................................................................................2180.1310000001000
.........................................................................................................................................................................................................................................CCTGTGGCCTATGTATCGCTG.....................................2190.1110100000000
......................................................................................................................................................................ATGTGGAGGCCCTGC--CGGC........................................................................................................1990.1110100000000
........................................................................................................ATG---CCC---------------------GACCAGCGCGACGTC..............................................................................................................................................2190.1110100000000
.......................................................................................................................................................................................................................GTCTTCAGTCGCTATGGCCC........................................................2090.1110000001000
...........................................................................................................................................................................................................................TCAGTCGCTATGGCCCTGTG....................................................2090.1110000000010
.............................................................................................................................................................................................................................................TGGCCTATGTATCGCTGCCTC.................................2190.1110100000000
..............................................................................................G---------ATG---CCC---------------------GACCAGCGCGACGT...............................................................................................................................................2190.1110000001000
..........................................................................................................................................................................................................................................CTGTGGCCTATGTATCGCT......................................1990.1110000100000
...........................................................................................................................................................................................................................................TGTGGCCTATGTATCGCTG.....................................1990.1110000000010
...........................................................................................CAAG---------ATG---CCC---------------------GACCAGCGCGA..................................................................................................................................................2190.1110000001000
........................................................................................................................................................................................................................TCTTCAGTCGCTATGGCCCTGTG....................................................2390.1110100000000
.....................................................................................................................................................................................................................................TGGCCCTGTGGCCTATGTATCG........................................2290.1110000010000
.......................................................................................................................................................................................................................................GCCCTGTGGCCTATGTATCGT.......................................2190.1110100000000
..................................................................................................................................................................................................................AGGAAGTCTTCAGTCGCTATG............................................................2190.1110100000000
.....................................................................................................................................................................................................................AAGTCTTCAGTCGCTATGGC..........................................................2090.1110000001000
............................................................................................................................................................AGACG-CTGTATGTGGAGGCCCTGC--CGGC........................................................................................................2890.1110000000100
....................................................................................................................................................................GTATGTGGAGGCCCTGC--CGT.........................................................................................................20100.1010000001000
.....................................................................................................................................................................TATGTGGAGGCCCTGC--CGG.........................................................................................................19100.1010000010000
...............................................................................................................................................GACGTCAATGACAAGACG-CT...............................................................................................................................20110.0910100000000
.............................................................................................................................................................GACG-CTGTATGTGGAGGC...................................................................................................................18110.0910000000010
......................................................................................................................................................ATGACAAGACG-CTGTATGTGGAGGC...................................................................................................................25110.0910000000100
....................................................................................................................................................................GTATGTGGAGGCCCTGC--C...........................................................................................................18110.0910100000000
...........................................................................................................................................................AAGACG-CTGTATGTGGAGG....................................................................................................................19110.0910100000000
......................................................................................................................................................ATGACAAGACG-CTGTATGTGG.......................................................................................................................21110.0910000001000
............................................................................................................................................................AGACG-CTGTATGTGGAGGCC..................................................................................................................20110.0910000010000
.........................................................................................................................................CAGCGCGACGTCAATGACAAG.....................................................................................................................................21110.0910000000010
..........................................................................................................................................................CAAGACG-CTGTATGTGGAGG....................................................................................................................20110.0910000010000
...............................................................................................................................................................CG-CTGTATGTGGAGGCCCTGC--............................................................................................................21110.0910000001000
.............................................................................................................................................................GACG-CTGTATGTGGAGGCCCC................................................................................................................21110.0910000001000
................................................................................................................................................................G-CTGTATGTGGAGGCCCTG...............................................................................................................19110.0910000001000
.............................................................................................................................................................GACG-CTGTATGTGGAGGCCT.................................................................................................................20110.0910100000000
............................................................................................................................................................AGACG-CTGTATGTGGAGGC...................................................................................................................19110.0910000000010
....................................................................................................................................................CAATGACAAGACG-CTGTATGTGGAGGCC..................................................................................................................28110.0910000000001
........................................................................................................................................CCAGCGCGACGTCAATGAC........................................................................................................................................19110.0910000001000
........................................................................................................................................................GACAAGACG-CTGTATGTGGAGT....................................................................................................................22110.0910000001000
..............................................................................................................................................CGACGTCAATGACAAGACG-C................................................................................................................................20110.0910000010000
.............................................................................................................................................................GACG-CTGTATGTGGAGGCCC.................................................................................................................20110.0910010000000
........................................................................................................................................CCAGCGCGACGTCAATGACA.......................................................................................................................................20110.0910000010000
.......................................................................................................................................................TGACAAGACG-CTGTATGTGGAGGC...................................................................................................................24110.0910000000010
droPer2
TGACATCTGC-----GTTGCCTGACCAGACGGTTCAGTGTAACACTGGGGCCGGCTCGGCTGCTTAATAAAATCCAAATCGCCTCGCATACAAAA---------ATATTTTGTATTTTATTTAATGGCAGCCAAA-------------------------GTCACAGCCAGTGATAAGAGCGAGGGCCAGGAGCC-----------------------------------------------TA--CCTCCAAGGCAGAGAAAGT---------ACCCCCC-----CTGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CGCCGTAAAA--------------------------------------------------------------------------------CTGCT---------TTG---CCG---------------------AAGCAACGCGATGTAAATGACAGGACT-CTGTATGTGGAGGCCCTGC--CGGCAAATGCCAGCCATGACTGGCTCAAAGAGGTCTTTAGCCGCTATGGACCTGTGGCTTATGTCTCTCTGCCACATTATCCGGG------------------AACGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................TCTGCCACATTATCCGGG------------------AAC..2111.00100010
................................................................................................................................................ATGTAAATGACAGGACT-CTGT.............................................................................................................................2111.00100001
..........................................................................................................................................................................................................................TTTAGCCGCTATGGACCTGT.....................................................2011.00110000
droVir3
GCATGTCACGTTCAAGCTGAATGACAAGCAGGTGCATGAGAACG-------------------------------------------ATACGAAAATACCACATGCAT------------------------------------------------------------------------------------------------------------------------------------TTTATATTT-------------------------------TATT-----TASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CGCCGCAAGA--------------------------------------------------------------------------------CTGCA---------CTG---CCG---------------------GAGCACCGGGACGTCAACAACAAAACC-CTTTATGTTGAGGCTCTGC--CAGCAACTGCAACACATGACTGGCTCAAAGAAGTTTTTGGCCGGTATGGCACGGTCAGCTATGTATCGTTGCCACATTATCCGGG------------------CACGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CGTCGTAAGA--------------------------------------------------------------------------------CTGAG---------TTG---CCG---------------------AAACAACGAGACGTCAACGATAAGACG-CTGTATGTCGAGGCGCTGC--CAGCGACGGCAACACACGATTGGCTCAAGGAGGTGTTCAGTCGCTATGGACCGGTTTCGTATGTGTCACTGCCGCACTACCCGGG------------------CACGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................ACTGCCGCACTACCCGGG------------------CACG.2211.00110
droAna3
GCTTAGCAAA--------------------------------------------------------------------------------CAAAA---------TTATATTCAATTTCCTTTAATGGCCACCA---------------------TAAAATAGCAGTCAGCAAAAGTAAAGC--CGGCCAAAAGCC------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAACATTTGA--------------------------------------------------------------------------------GTGTG---------T------------------------GCGTAG-------------------------ACAAAAGAAAAAAAATATAGCAAAACACAAAGTTT-----------------------------------------------TG--TG---------------------------TTATTTTGT-----TTSizeHit CountTotal NormTotal
No Reads
droKik1
AAACGGAAGA--------------------------------------------------------------------------------CAAAA---------CTG---CCG---------------------AAGCAGCGCGACGTCAACGACAAGACG-CTGTATGTCGAGGCCTTGC--CGGCAAATGCCACCCACGATTGGTTGAAGGAGGTTTTCAGCCGATACGGACCGGTGGCATATGTCTCCCTGCCCCATTACCCCGG------------------CACCASizeHit CountTotal NormTotal
No Reads
droFic1
TTA-----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAA-------------------------AGCACAGAAAAGGAAAAGGTCGATGGCCAGGAGCC-----------------------------------------------TG--CCACCCCGGTGGAAAAACCAGATCCCGTCGCATCCACTGATCCCGSizeHit CountTotal NormTotal
No Reads
droEle1
CGGCGCAAGA--------------------------------------------------------------------------------CCAAG---------CTT---CCG---------------------GATCAGCGCGATGTCAACGACAAGACG-CTGTATGTGGAGGCCCTGC--CCGCCAATGCTAGCCACGATTGGTTGAAGGAGGTGTTCAGCCGCTACGGATCGGTGGCCTACGTCTCGCTGCCTCACTATCCGGG------------------CACCASizeHit CountTotal NormTotal
No Reads
droRho1
CGACATTTGA--------------------------------------------------------------------------------GTGAC---------CTA---A--------------ATATATTAAA-------------------------AACCTTACAAA--------------------------------------------ATATTTAAATAAAAACTTACAGTAACTTTTATGTTTTT-----TTTGACAGGA------------------GTCAASizeHit CountTotal NormTotal
No Reads
droBia1
A--------------------------------------------------------------------------------------------------------------------------ATGGCTGCCAAA-------------------------AGCACTGAGAAAGAGAAGGGCGAGGGCCAGGAGCC-----------------------------------------------CA--CCACCCCGGCGGAGAAACCAGA------------------TCCGGSizeHit CountTotal NormTotal
No Reads
droTak1
A--------------------------------------------------------------------------------------------------------------------------ATGGCCGCCAAA-------------------------AGCAGCGAGAAGGAGAAGGGCGAGTCCCAGGAGCC-----------------------------------------------GG--TGACGCCGGCGGAGAAGTCTGAACCGGC------------GGCAGSizeHit CountTotal NormTotal
No Reads
droEug1
AAGCGAAAGA--------------------------------------------------------------------------------CCAAA---------CTT---CCG---------------------GATCACCGTGATGTGAACGACAAAACG-CTTTACGTGGAAGCCCTAC--CCGCAAATGCTAGCCATGATTGGCTCAAGGAGGTTTTCAGCCGCTACGGGCCAGTGGCTTACGTCTCACTGCCCCACTATCCGGG------------------CACTASizeHit CountTotal NormTotal
No Reads
dm3
ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGTATCGAGAAGGAGAAGGGCGAGGGTCAGGAGCC-----------------------------------------------CG--CGACATCAGCGGAGAAACCCGAT------------------CCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................ATCGAGAAGGAGAAGGGC..............................................................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100010000000031020000100000000000000000
..........................................................................................................................................................................AGGAGAAGGGCGAGGGTC.......................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000110000000020000000100000000000000000
................................................................................................................................................................................AGGGCGAGGGTCAGGAGCC-----------------------------------------------CG--CGAC.........................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AAGGAGAAGGGCGAGGGTAGA.....................................................................................................2154.602300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AG.................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................TCGAGAAGGAGAAGGGCGAGG..........................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................AATGGCTGCCAAG-------------------------AGTATC.............................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GCCAAG-------------------------AGTATCGAGAAG.......................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000001000000000000000
...........................................................................................................................ATGGCTGCCAAG-------------------------AGTATCGAGAAGGAG....................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AATGGCTGCCAAG-------------------------AGTATCGA...........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000
..................................................................................................................................................................TATCGAGAAGGAGAAGGGC..............................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................GCTGCCAAG-------------------------AGTATCGAGAAGGA.....................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGGAGCC-----------------------------------------------CG--CGACATCAGCGGAG...............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................AGGGCGAGGGTCAGGAGC.................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................ATGGCTGCCAAG-------------------------AGTATCGAGAA........................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................TGCCAAG-------------------------AGTATCGAGAAGGAGAA..................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................G-------------------------AGTATCGAGAAGGAGAA..................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000
.........................................................................................................................................................................AAGGAGAAGGGCGAGGGTAG......................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GACATCAGCGGAGAAACCCGA.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................ATCGAGAAGGAGAAGGGCG.............................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000
................................................................................................................................................................AGTATCGAGAAGGAGAAGG................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................AGAAGGGCGAGGGTCAGGAGCC-----------------------------------------------.................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................GTATCGAGAAGGAGAAGGGC..............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................CCAAG-------------------------AGTATCGAGAAGG......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGTATCGA...........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................AAG-------------------------AGTATCGAGAAGGAGAAGGG...............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GCCAAG-------------------------AGTATCGAGAAGGAGA...................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AG-------------------------AGTATCGAGAAGGAGAAGGGCG.............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................AGGGTCAGGAGCC-----------------------------------------------CG--CGACATCAGCGG.................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................GAGAAGGAGAAGGGCGAG...........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................AGGGCGAGGGTCAGGAGCC-----------------------------------------------CG--CGA..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGGAGCC-----------------------------------------------CG--CGACATCAGCG..................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..TC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGTATCGAGAA........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................AGGAGAAGGGCGAGGGTCA......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................G-------------------------AGTATCGAGAAGGAGAAGGG...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................GACATCAGCGGAGAAACCCGAT------------------....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..............................................................................................................................GCTGCCAAG-------------------------AGTATCGAGAAGG......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................GGCTGCCAAG-------------------------AGTATCGAGAAG.......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................................................................................................................................................................GGGCGAGGGTCAGGAGCC-----------------------------------------------.................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTGCCAAG-------------------------AGTATCGAGAAGGA.....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CGAGGGTCAGGAGCC-----------------------------------------------CG--CGAC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GAGAAGGAGAAGGGCGAGGGTCA......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGGAGCC-----------------------------------------------CG--CGACATCAGC...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................CGACATCAGCGGAGAAACCCGA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGTATCG............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AATGGCTGCCAAG-------------------------AGTATCGAGAAG.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GTCAGGAGCC-----------------------------------------------CG--CGACATCAGCGGA................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................GGCTGCCAAG-------------------------AGTATCGAG..........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GAGGGTCAGGAGCC-----------------------------------------------CG--CGAC.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AGGGCGAGGGTCAGGAGCC-----------------------------------------------CG--CGTG.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AAG-------------------------AGTATCGAGAAGGAGAAGGGC..............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................GCCAAG-------------------------AGTATCGAGAAGGA.....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................GCCAAG-------------------------AGTATCGAGAAGGAG....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................GACATCAGCGGAGAAACCCG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GAAGGAGAAGGGCGAGGGT........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................AGGAGAAGGGCGAGGGTCAGGA...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................TGGCTGCCAAG-------------------------AGTATCGAG..........................................................................................................................2011.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGGAGCC-----------------------------------------------CG--CGACATCAGCGG.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................AATGGCTGCCAAG-------------------------AGTATCG............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGTA...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGCCAAG-------------------------AGTATCGAGAAGGA.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GCCAAG-------------------------AGTATCGAGAAGGAGAAGGG...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AGGAGAAGGGCGAGGGC........................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AGGAGAAGGGCGAGGGTAGA.....................................................................................................20110.3640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AAGGAGAAGGGCGAGGT.........................................................................................................1740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCC-----------------------------------------------CG--CGACGTCAGCGGAGAAACCCGATCCAGCCGCACCCACT-----GASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................TCTGGAGCC-----------------------------------------------CG--CGACGTCAGCGGAG...............................2511.00100000000010000000
...............................................................................................................................CTGCCAAG-------------------------AGCACGGAGAAGG......................................................................................................................2111.00100000001000000000
......................................................................................................................................................................................................................................................CGACGTCAGCGGAGAAACCCGATC.....................2411.00100000001000000000
..........................................................................................................................AATGGCTGCCAAG-------------------------AGCACGGAG..........................................................................................................................2211.00100010000000000000
droSec2
ACTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCCAAG-------------------------AGCACGGAGAAGGAGAAGGGCGAGGGTCTGGAGCC-----------------------------------------------CG--CGACGTCAGCGGAGAAACCCGATCCAGCCTCACCCACT-----GASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................AGGAGAAGGGCGAGGGTCTGGAGC.................................................................................................2411.0010001
droYak3
ATTC----------------------------------------------------------------------------------------------------------------------AATGGCTGCTAAA-------------------------AGCACAGAGAAAGAGAAGGGCGAGGGCCAGGAGCC-----------------------------------------------CG--CGACGCCAGCGGAAAAACCCGATCCTGCCGCACCCACC-----GASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AAGCGACGCA--------------------------------------------------------------------------------CCAAG---------CTT---CCA---------------------GATCAGCGCGATGTCAACGACCAAACC-TTGTATGTTGAGGCTCTGC--CTGCGAATGCCACTCACGATTGGCTGAAGGAGGTTTTCAGCCGCTACGGACCGGTGGCCTATGTCTCCCTGCCCCACTATCCGGG------------------CACAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................AGGCTCTGC--CTGCGAATGCC.................................................................................................2011.0011000000
.............................................................................................................................................................................GGCTCTGC--CTGCGAATGCCACTCAC...........................................................................................2511.0011000000

Generated: 05/18/2015 at 03:06 AM