ID:

dps_2111

 Coordinate:

Unknown_group_61:21176-21326 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -19.0 -18.6 -18.4

Flybase annnotation

exon [dpse_GLEANR_7616:2]; CDS [Dpse\GA28180-cds]; intron [Dpse\GA28180-in]

Repeatable elements

NameClassFamilyStrand
BEL-13_DTa-LTRLTRPao+
mature
  1. Unknown_group_492:5695-5715 +
  2. Unknown_group_492:12176-12196 +
  3. Unknown_singleton_1665:597-617 -
  4. Unknown_singleton_1665:6675-6695 -
  5. Unknown_singleton_1629:2490-2510 -
  6. Unknown_singleton_1629:2695-2715 -
  7. dps_2111  Unknown_group_61:21241-21261 -
  8. Unknown_singleton_3325:276-296 -
star
  1. Unknown_group_492:5751-5777 +
  2. Unknown_group_492:12232-12258 +
  3. Unknown_singleton_1665:535-561 -
  4. Unknown_singleton_1665:6613-6639 -
  5. Unknown_singleton_1629:2428-2454 -
  6. Unknown_singleton_1629:2633-2659 -
  7. dps_2111  Unknown_group_61:21179-21205 -
  8. Unknown_singleton_3325:214-240 -
  9. Unknown_singleton_2296:2173-2199 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTGTTTTATTCTATAAAGTATATCGGTCATAACCTAATACAATGTTGCCAAATAATCTTACCGCAGTATGTCCTCCTGCTTTAACCTCTCGACAGTAAAAGAGAAGCTTAAATTTATGGCGGCACCTCGTGGTGGCCGAAAAATAGGCCCGTTCATTCGTGGCTGGAAATTCACCTTCTATCGATATACATAAATACTAGATCTAATACTAGCTTGCCTATCGCGGTCAACTATCGACCGTCGACAGCAC
*******************************************************************************************************************(((.........((((((.((..((......((((((......)).))))......)).))..))).))).........))).***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 M062
head
 GSM343916
embryo
 GSM444067
head
 V112
male body
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGG........................ 23 0 8 2.88 23 23 0 0 0 0 0 0
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTC...................... 25 0 8 2.63 21 19 0 1 0 0 0 1
.......TATTCTATAAAGTATATCGGTCATAACC........................................................................................................................................................................................................................ 28 0 4 2.00 8 6 0 2 0 0 0 0
...........................................................TACCGCAGTATGTCCTCATGTTT......................................................................................................................................................................... 23 2 2 1.50 3 3 0 0 0 0 0 0
..........................................................TTACCGCAGTATGTCCTCATGTTT......................................................................................................................................................................... 24 2 2 1.50 3 3 0 0 0 0 0 0
...................................................................................................................TATGGCGGCACCTCGTGGTGG................................................................................................................... 21 0 8 1.00 8 7 0 0 0 0 1 0
.................................................................................................................TTTATGGCGGCACCTCGTGG...................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0
...........................................................................................................................................................................TCACCTTCTATCGATATACATAAATAC..................................................... 27 0 9 0.89 8 5 2 1 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAACTA................. 27 0 8 0.88 7 7 0 0 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAAC................... 25 0 8 0.88 7 7 0 0 0 0 0 0
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGT....................... 24 0 8 0.75 6 6 0 0 0 0 0 0
..........................................................................................................................................................................................................TCTAATACTAGCTTGCCTATCGCGG........................ 25 0 8 0.75 6 6 0 0 0 0 0 0
...........................................................................................................................................................................TCACCTTCTATCGATATACATAAA........................................................ 24 0 9 0.67 6 4 2 0 0 0 0 0
..........................................................TTACCGCAGTATGTCCTCCTGCT.......................................................................................................................................................................... 23 0 10 0.60 6 5 0 1 0 0 0 0
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTCAAC................... 28 0 8 0.50 4 4 0 0 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCGG........................ 20 0 8 0.50 4 4 0 0 0 0 0 0
..............................................................CGCAGTATGTCCTCATGTTT......................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0
......................................TACAATGTTGCCAAATAATCTTACC............................................................................................................................................................................................ 25 0 6 0.50 3 2 1 0 0 0 0 0
......................................................................GTCCTCATGTTTTAACCTCTCGA.............................................................................................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
........................................................................................CTCGACAGTAAAAGAGAAGCTTAAATT........................................................................................................................................ 27 0 2 0.50 1 0 1 0 0 0 0 0
.................................................................................................................TTTATGGCGGCACCTCGTG....................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................TCATGTTTTAACCTCTCGAC............................................................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................TAAATTTATGGCGGCACCTCGTGG...................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................CTTACCGCAGTATGTCCTCATGTTT......................................................................................................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
...........................................................TACCGCAGTATGTCCTCCTGCTT......................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
.......TATTCTATAAAGTATATCGGTCATAA.......................................................................................................................................................................................................................... 26 0 4 0.50 2 0 2 0 0 0 0 0
................................................................................................................CTATATGGCGGCACCTCGTGGTGGCCGA............................................................................................................... 28 2 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................................................................................................TCACCTTCTATCGATATACATAAATACT.................................................... 28 0 9 0.44 4 4 0 0 0 0 0 0
..................................................................................................................TTATGGCGGCACCTCGTGGTGG................................................................................................................... 22 0 8 0.38 3 3 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCAACTATCGACCGTCGACAG... 21 0 3 0.33 1 1 0 0 0 0 0 0
...................................TAATACAATGTTGCCAAATAATCT................................................................................................................................................................................................ 24 0 6 0.33 2 2 0 0 0 0 0 0
........................................................TCTTACCGCAGTATGTCCTCCTG............................................................................................................................................................................ 23 0 10 0.30 3 3 0 0 0 0 0 0
.......TATTCTATAAAGTATATCGGTCATA........................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAACT.................. 26 0 8 0.25 2 2 0 0 0 0 0 0
.......TATTCTATAAAGTATATTGGTCATAAC......................................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0
..............TAAAGCATATCGGTCATAACCTAATA................................................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0
...................................................................................................................TATGGCGGCACCTCGTGG...................................................................................................................... 18 0 8 0.25 2 2 0 0 0 0 0 0
..................................................................................................................TTATGGCGGCACCTCGTGG...................................................................................................................... 19 0 8 0.25 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCA..................... 23 0 8 0.25 2 2 0 0 0 0 0 0
.......TATTCTATAAAGTATATCGGTCAT............................................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0 0
.....................................................TAATCTTACCGCAGTATGTCCTCATG............................................................................................................................................................................ 26 1 8 0.25 2 2 0 0 0 0 0 0
.............................................TTGCCAAATAATCTTACCGCAGTA...................................................................................................................................................................................... 24 0 8 0.25 2 2 0 0 0 0 0 0
...................................................................................................................TATGGCGGCACCTCGTGGA..................................................................................................................... 19 1 8 0.25 2 2 0 0 0 0 0 0
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTCAA.................... 27 0 8 0.25 2 2 0 0 0 0 0 0
..........................................................TTACCGCAGTATGTCCTCCTGC........................................................................................................................................................................... 22 0 10 0.20 2 2 0 0 0 0 0 0
......TTATTCTATAAAGTATATCGGTCA............................................................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0
........................................................................................CTCGACAGTAAAAGAGAAGCTTAAA.......................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................................TCTCGACAGTAAAAGAGAAGCTTAA........................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0
...................................TAATACAATGTTGCCAAATAATCTTACC............................................................................................................................................................................................ 28 0 6 0.17 1 0 0 1 0 0 0 0
......................................TACAATGTTGCCAAATAATCTTACCGCAG........................................................................................................................................................................................ 29 0 6 0.17 1 1 0 0 0 0 0 0
...................................TAATACAATGTTGCCAAATAATC................................................................................................................................................................................................. 23 0 6 0.17 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGCCTATCGCGGTCAACTATCGA............. 24 0 7 0.14 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGCCTATCGCGGTCAACTATCGACC........... 26 0 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GCTTGCCTATCGCGGTCAACTATCGAC............ 27 0 7 0.14 1 1 0 0 0 0 0 0
..............................................TGCCAAATAATCTTACCGCAGTATGTCC................................................................................................................................................................................. 28 0 8 0.13 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................TAATACTAGCCTGCCTATCGCGGT....................... 24 1 8 0.13 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................ACTAGCTTGCCTATCGCGGTCAAC................... 24 0 8 0.13 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................TACTAGATCTAATACTAGCTTGCCTA.............................. 26 0 8 0.13 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTCT..................... 26 1 8 0.13 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGCCTATCGCGGTCAACT.................. 19 0 8 0.13 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................CTAATACTAGCTTGCCTATCGCGG........................ 24 0 8 0.13 1 1 0 0 0 0 0 0
......................................................................................CTCTCGACCGTAAAAGAGGA................................................................................................................................................. 20 2 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TTATGGCGGCACCTCGTGT...................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TTATGGCGGCACCTCGTGGTGGC.................................................................................................................. 23 0 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCG......................... 19 0 8 0.13 1 1 0 0 0 0 0 0
...................................................................................................................TATGGCGGCACCTCGTGGTGGT.................................................................................................................. 22 1 8 0.13 1 1 0 0 0 0 0 0
..................................................................................TAACCTCTCGACAGTAAAAGTGAAGCC.............................................................................................................................................. 27 2 8 0.13 1 1 0 0 0 0 0 0
.....................................................TAATCTTACCGCAGTATGTCCTCC.............................................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................AATACTAGCTTGCCTATCGC.......................... 20 0 8 0.13 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................TACTAGATCTAATACTAGCTTGCC................................ 24 0 8 0.13 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................ACTAGATCTAATACTAGCTTGCC................................ 23 0 8 0.13 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATCTAATACTAGCTTGCCTA.............................. 23 0 8 0.13 1 1 0 0 0 0 0 0
...........................................TGTTGCCAAATAATCTTACCGCAGTA...................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0
...................................................................................................................TATGGCGGCACCTCGTGGTGGC.................................................................................................................. 22 0 8 0.13 1 0 0 0 1 0 0 0
..................................................................................................................GTATGGCGGCACCTCGTGG...................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TTATGGCGGCACCTCGTGGTG.................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TTATGGCGGCACCTCGTGGTA.................................................................................................................... 21 1 8 0.13 1 1 0 0 0 0 0 0
.....................................................TAATCTTACCGCAGTATGTCCTCCTG............................................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAA.................... 24 0 8 0.13 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATCTAATACTAGCTTGCCTATC............................ 25 0 8 0.13 1 1 0 0 0 0 0 0
...................................................................................AACCTCTCGACAGTAAAAGTGAAGCC.............................................................................................................................................. 26 2 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................AATTTATGGCGGCGTCACGT........................................................................................................................ 20 3 8 0.13 1 0 0 0 0 1 0 0
............................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGG....................... 24 1 8 0.13 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................ACTAGCTTGCCTATCGCGG........................ 19 0 8 0.13 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................CTACTAGCTTGCCTATCGCGGTCAA.................... 25 1 8 0.13 1 1 0 0 0 0 0 0
.........................................................................................TCGACAGTAAAAGAGAAGCT.............................................................................................................................................. 20 0 8 0.13 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATCTAATACTAGCTTGCCTATCGCGG........................ 29 0 8 0.13 1 1 0 0 0 0 0 0
...........................................................................................................................................................................TCACCTTCTATCGATATACATAAAT....................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0
...........................................................................................................................................................................TCACCTTCTATCGATATACATAAATA...................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0
...........................................................................................................................................................................TCACCTTCTATCGATATACATAGATAC..................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATCTAATACTAGCTTG.................................. 19 0 9 0.11 1 1 0 0 0 0 0 0
............................................GTTACCAAATGATCTTACC............................................................................................................................................................................................ 19 2 9 0.11 1 1 0 0 0 0 0 0
...........................................................TACCGCAGTATGTCCTCCTGCT.......................................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0
.........................................................................................................................................................TCATTCGTGGCTGGAAATTCACCTTC........................................................................ 26 0 10 0.10 1 1 0 0 0 0 0 0
...........................................................TACCGCAGTATGTCCTCCTG............................................................................................................................................................................ 20 0 10 0.10 1 1 0 0 0 0 0 0
........................................................................................................................................................TTCATTCGTGGCTGGAAATTCACCT.......................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0
..........................................................TTACCGCAGTATGTCCTCATGTT.......................................................................................................................................................................... 23 2 10 0.10 1 1 0 0 0 0 0 0
..........................................................TTACCGCAGTATGTCCTCCTG............................................................................................................................................................................ 21 0 10 0.10 1 1 0 0 0 0 0 0
...................................................................................................................TATGGCGGCACCTCGTGAAA.................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................AATGCTATCTTGCCTATCGG.......................... 20 3 13 0.08 1 1 0 0 0 0 0 0
..................................................................................................................TTCCGGCTGCACCTCGTGGT..................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

CGACAAAATAAGATATTTCATATAGCCAGTATTGGATTATGTTACAACGGTTTATTAGAATGGCGTCATACAGGAGGACGAAATTGGAGAGCTGTCATTTTCTCTTCGAATTTAAATACCGCCGTGGAGCACCACCGGCTTTTTATCCGGGCAAGTAAGCACCGACCTTTAAGTGGAAGATAGCTATATGTATTTATGATCTAGATTATGATCGAACGGATAGCGCCAGTTGATAGCTGGCAGCTGTCGTG
*****************************************************(((.........((((((.((..((......((((((......)).))))......)).))..))).))).........))).******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 GSM444067
head
 SRR902011
testis
 M062
head
 M022
male body		 M059
embryo
....................................................................................................................................................................................................................CGTACGGATAGCGCAAGTTG................... 20 2 8 9.00 72 44 0 22 5 0 0 1 0
....................................................................................................................................................................................................................CGTACGGATAGCGCAAGTTGC.................. 21 3 9 5.33 48 19 0 18 9 0 1 1 0
...................................................................................................................................................................................................................ACGTACGGATAGCGCAAGTTG................... 21 3 10 4.10 41 33 0 8 0 0 0 0 0
........................................................................GGAGGACGAAATTGGAGAGCTGTCA.......................................................................................................................................................... 25 0 2 4.00 8 2 4 0 0 2 0 0 0
.....................................................................................................................................................................................................................GTACGGATAGCGCAAGTTG................... 19 2 8 3.38 27 21 0 4 0 0 1 1 0
.........................................................................GAGGACGAAATTGGAGAGCTGTCA.......................................................................................................................................................... 24 0 2 3.00 6 1 5 0 0 0 0 0 0
.............................................................................................................................................................AGCACCGACCTTTAAGTGGAAGAT...................................................................... 24 0 9 1.89 17 17 0 0 0 0 0 0 0
........................................................................GGAGGACGAAATTGGAGAGCTGTCAT......................................................................................................................................................... 26 0 2 1.50 3 1 2 0 0 0 0 0 0
......................................................................CAGGAGGACGAAATTGGAGAGCTGTCA.......................................................................................................................................................... 27 0 2 1.50 3 0 3 0 0 0 0 0 0
..............................................ACGGTTTATTAGAATGGCGTCAT...................................................................................................................................................................................... 23 0 8 1.25 10 10 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TACGGATAGCGCAAGTTG................... 18 2 9 1.11 10 10 0 0 0 0 0 0 0
.......................................................................AGGAGTACAAAATTGGAGAGCTGTCA.......................................................................................................................................................... 26 2 2 1.00 2 2 0 0 0 0 0 0 0
.........................................................................GAGGACGAAATTGGAGAGCTGTCAT......................................................................................................................................................... 25 0 2 1.00 2 0 1 0 0 1 0 0 0
..............................................................................................................................................................GCACCGACCTTTAAGTGGAAGAT...................................................................... 23 0 9 0.78 7 7 0 0 0 0 0 0 0
...............................................CGGTTTATTAGAATGGCGTCAT...................................................................................................................................................................................... 22 0 8 0.75 6 5 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................GTACGGATAGCGCAAGTTGC.................. 20 3 9 0.67 6 2 0 2 0 0 1 1 0
............................................CAACGGTTTATTAGAATGGCGTCA....................................................................................................................................................................................... 24 0 8 0.63 5 5 0 0 0 0 0 0 0
...........................................................................................................................................................TAAGCACCGACCTTTAAGTGGAAGAT...................................................................... 26 0 9 0.56 5 4 0 0 0 0 0 0 1
....................................................................................................................................................................................................................CGTACGGATAGCGCAAGTT.................... 19 2 9 0.56 5 5 0 0 0 0 0 0 0
........................................................................GGAGTACAAAATTGGAGAGCTGTGA.......................................................................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 1 0 0
.............................................................................ACAAAATTGGAGAGCTGTCATT........................................................................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................GAGTACAAAATTGGAGAGCTGTC........................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................AGGACGAAATTGGAGAGCTGTCAT......................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................GAGTACAAAATTGGAGAGCTGT............................................................................................................................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................GGACGAAATTGGAGAGCTGTCATT........................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................TGACGAAATTGGAGAGCTGTCA.......................................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................GGAGTACAAAATTGGAGAGCTGTCATT........................................................................................................................................................ 27 2 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATATGTATTTATGATCTAGATTAT.......................................... 24 0 9 0.44 4 0 4 0 0 0 0 0 0
...............................................................................................................................................................CACCGACCTTTAAGTGGAAGAT...................................................................... 22 0 9 0.33 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACGGATAGCGCAAGTTGCG................. 19 3 17 0.29 5 4 0 0 0 0 1 0 0
....................................................................................................................................................................................................................CGAACGGATAGCGCCAGTTGATAGC.............. 25 0 7 0.29 2 2 0 0 0 0 0 0 0
..........................................TACAACGGTTTATTAGAATGGCGTCA....................................................................................................................................................................................... 26 0 8 0.25 2 2 0 0 0 0 0 0 0
.............................................AACGGTTTATTAGAATGGCGTCA....................................................................................................................................................................................... 23 0 8 0.25 2 2 0 0 0 0 0 0 0
..........................................TACAACGGTTTATTAGAATGGCGTCAT...................................................................................................................................................................................... 27 0 8 0.25 2 2 0 0 0 0 0 0 0
............................................CAACGGTTTATTAGAATGGCGTC........................................................................................................................................................................................ 23 0 8 0.25 2 2 0 0 0 0 0 0 0
............................................................................................................................................................AAGCACCGACCTTTAAGTGGAAGAT...................................................................... 25 0 9 0.22 2 2 0 0 0 0 0 0 0
................................................................................................................................................................ACCGACCTTTAAGTGGAAGAT...................................................................... 21 0 9 0.22 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTACGGATAGCGCAAGT..................... 18 2 9 0.22 2 1 0 0 0 0 0 1 0
.................................................................................................................................................................CCGACCTTTAAGTGGAAGAT...................................................................... 20 0 9 0.22 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................TAAGCACCGACCTTTAAGTGGAAG........................................................................ 24 0 10 0.20 2 2 0 0 0 0 0 0 0
.......................................................................................AGAGCTGTCATTTTCTCTTCGAAT............................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................TAAGCACCGACCTTTAAGTGGAAGA....................................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTACGGATAGCGCAAGTT.................... 18 2 11 0.18 2 2 0 0 0 0 0 0 0
.................................GGATTATGTTACAACGGTTTATT................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0
..............................................................................................................................GAGCACCACCGGCTTTTTAT......................................................................................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................AACGGTTTATTAGAATGGCGTCAT...................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0
...........................................ACAACGGTTTATTAGAATGGCGTCA....................................................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0
......................................................................................................................CCGCCGTGGAGCACCACCGGCTTTT............................................................................................................ 25 0 8 0.13 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTACGGATAGCGCGAGTTGC.................. 21 3 8 0.13 1 1 0 0 0 0 0 0 0
...............................................CGGTTTATTAGAATGGCGTCA....................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TATGATCGAACGGATAGCGCCAGT..................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0
................................................GGTTTATTAGAATGGCGTCAT...................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0
............................................CAACGGTTTATTAGAATGGCGTCAT...................................................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................AACGGTTTATTAGAATGGCGT......................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0
.........................................TTACAACGGTTTATTAGAATGGCG.......................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0
...............................................CGGTTTATTAGAATGGCGTCATACA................................................................................................................................................................................... 25 0 8 0.13 1 0 0 0 0 0 0 0 1
.................................................................................................................................................................CCGACCTTTAAGTGGAAGATAGCTAT................................................................ 26 0 9 0.11 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTACGGATAGCGGAAGTTG................... 20 3 9 0.11 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTACGGATAGCGCAGGTTG................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CCTACGGATAGCGCAAGTTG................... 20 3 10 0.10 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................AGCACCGACCTTTAAGTGGAAGA....................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0
.....................................................................................................................ACTGCCGCGGAGCACCAC.................................................................................................................... 18 2 14 0.07 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTACGGATAGCGCAAGTC.................... 19 3 18 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................................GGGTTATTATCCGGGGAAG................................................................................................ 19 3 19 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................TTTTTATTAGGGCAAGTTAG............................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTACGGATAGCGCAAGTCG................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_61:21126-21376 - dps_2111 GC--------TGTTTTATTCTATAAAG---TATATCGG---TCATAACCTAATACAATGTTGCCAAA-TAATCTTACCGCAGTATGTCCTCCTGC----TTTAACCTCTCGACAGTAAAAGAG-AAGCTTAAATTTATGGCGGCACCTCGTGGTGGCCGA--AAAATAGGCCCGTTCATTCGTGG-CTGGAAATTCAC-CTTCTAT--CGATATACATA-AATACTAGATCTAATACTAGCTTGCCTATCGCGGTCAACTATCGACCGTCGACAGC------AC
droPer2 scaffold_70:95149-95404 + GCTGGCTGGCTGTTTTATTCTATAAAG---TATATCGG---TCATAACCTAATACAATGTTGCCAAA-TAATCTTACCGCAGTATGTCCTCCTGC----TCTAACCTCTCGACAGTAAAAGAG-AAGCTTAAAATTATGGCGGCACCTCGTGGTGGCCGA--AAAATATGCCCGTTCATTCGTGG-CTGGAAATTCAC-CTTCTAT--CGATATACATA-AATACTAGATCTAATACTAGCTTGCCTATCGCGGTCAACTATCGACCGTCGACAG---------
droVir3 scaffold_12815:173854-174058 + GG--------TGTTTTGTTCTAAACGGAT-TACATGGG---TTAGAACTTAGATAGATATTCCCTCA-GAATCTTACCGCAGTCTTTCCTCCTACGGCCTTCGAACTCAGGACAATAATCAGG-ACAATTTAAGTAATGGCGGCAAC-AATC-----CAAATACAGTGTGCGCGTACATTCAGAGGGCAAAAATACAAACTT-TCAGACAAT--AC-TT-AATACTAAAT------------------------------------------------------
droMoj3 scaffold_6353:40688-40693 + CG--------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC
droAna3 scaffold_13111:53002-53031 + TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAACCGTCGGTTGATATTTCAGGCTC
droBip1 scf7180000394822:6597-6600 - GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC
droKik1 scf7180000297937:376-379 + GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC
droFic1 scf7180000453266:10889-10893 + AG--------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC
droEle1 scf7180000487431:473-476 + GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC
droRho1 scf7180000777984:12202-12441 - GC--------CGTTTTATACTATAAAACT-GGCATCAGCAAATATAACCTAATACAATTTTACTAAGCTAAGCTTACCGCAGTGTGTCGTCATGC----TCTAACCACGCGACAAT----GCGGAAGCTTAAATCTATGGCGGCAATCTATGGTGGGC----AAAATATGACCGTTCATTCTTGGACTCAGAATCCATACAATTC---------AAATAAAATAATAGATGTA---CTAA--A-ACCATCAGGATTAACTATCGTGC-TCGACAGC------A-
droBia1 scf7180000299506:2727-2731 - AG--------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC
droTak1 scf7180000415752:47147-47380 - GC--------CGTTTTATTCTGGAAATATTC----------TCTTAACCTACCACAATTCTGTTAAC-TAATCTTACCGCAGTATGTCCTCCTTA----ATTCACCACGCGACAATCAATGTGGAAGCTTAAAATCATAGCGCCAAA-CATGGCCGCT----CAAATATGACCGTTCAGCGGTCGAGATCAAATCCATACATTTCT--CGATATA-------TACTAAACTTAATCTTAA--GACCTATCG-GATGAACTATCGTCCGTCGACA----------
droEug1 scf7180000409503:11206-11447 + GC--------CGTTTTATTCTGAAAATATTCACATTAT---ACATAACTTACCACAATTCTGTTAGC-TAATCTTACCGCAGTATGTCCTCCTTA----ATTCACTAAGCGACAATCAATGCG-GAACTTAA-ATCATAGCGGCAAATCACATCAGCC-----CAATGTGACCGTTCATCGGTCGAGAGCTAATCCATACATTTAT--CGATATA--TA-CGTACTAAACT--ATGTAAA--TAGCTATCG-GATGTACTATCGTACGTCGACAG---------
droSec2 scaffold_665:5318-5321 + GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC
droYak3 v2_chrUn_001:35378-35411 - AA--------A-------------------TATATCGG---TTATTGCCTGATCCGATGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droEre2 scaffold_1795:4577-4610 - GT--------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAGCAGCTTTCGACTCCCTGAATTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GC--------TGTTTTATTCTATAAAG---TATATCGG---TCATAACCTAATACAATGTTGCCAAA-TAATCTTACCGCAGTATGTCCTCCTGC----TTTAACCTCTCGACAGTAAAAGAG-AAGCTTAAATTTATGGCGGCACCTCGTGGTGGCCGA--AAAATAGGCCCGTTCATTCGTGG-CTGGAAATTCAC-CTTCTAT--CGATATACATA-AATACTAGATCTAATACTAGCTTGCCTATCGCGGTCAACTATCGACCGTCGACAGC------ACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGG..............................2382.882302300000000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTC............................2582.632101910001000
...............TATTCTATAAAG---TATATCGG---TCATAACC...........................................................................................................................................................................................................................................2842.0080620000000
.......................................................................................................................................TATGGCGGCACCTCGTGGTGG................................................................................................................................2181.0080700010000
.....................................................................................................................................TTTATGGCGGCACCTCGTGG...................................................................................................................................2021.0020200000000
..................................................................................................................................................................................................TCAC-CTTCTAT--CGATATACATA-AATAC...........................................................2790.8980510000200
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAACTA.......................2780.8870700000000
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAAC.........................2580.8870700000000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGT.............................2480.7560600000000
.....................................................................................................................................................................................................................................TCTAATACTAGCTTGCCTATCGCGG..............................2580.7560600000000
..................................................................................................................................................................................................TCAC-CTTCTAT--CGATATACATA-AA..............................................................2490.6760400000200
.........................................................................TTACCGCAGTATGTCCTCCTGC----T........................................................................................................................................................................................23100.6060510000000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTCAAC.........................2880.5040400000000
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCGG..............................2080.5040400000000
....................................................TACAATGTTGCCAAA-TAATCTTACC..............................................................................................................................................................................................................2560.5030200000100
...........................................................................................................CTCGACAGTAAAAGAG-AAGCTTAAATT.....................................................................................................................................................2720.5010000000100
.....................................................................................................................................TTTATGGCGGCACCTCGTG....................................................................................................................................1920.5010100000000
.................................................................................................................................TAAATTTATGGCGGCACCTCGTGG...................................................................................................................................2420.5010100000000
..........................................................................TACCGCAGTATGTCCTCCTGC----TT.......................................................................................................................................................................................2320.5010100000000
...............TATTCTATAAAG---TATATCGG---TCATAA.............................................................................................................................................................................................................................................2640.5020000000200
..................................................................................................................................................................................................TCAC-CTTCTAT--CGATATACATA-AATACT..........................................................2890.4440400000000
......................................................................................................................................TTATGGCGGCACCTCGTGGTGG................................................................................................................................2280.3830300000000
..............................................................................................................................................................................................................................................................TCAACTATCGACCGTCGACAG.........2130.3310100000000
.................................................TAATACAATGTTGCCAAA-TAATCT..................................................................................................................................................................................................................2460.3320200000000
.......................................................................TCTTACCGCAGTATGTCCTCCTG..............................................................................................................................................................................................23100.3030300000000
...............TATTCTATAAAG---TATATCGG---TCATA..............................................................................................................................................................................................................................................2540.2510100000000
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAACT........................2680.2520200000000
.......................................................................................................................................TATGGCGGCACCTCGTGG...................................................................................................................................1880.2520200000000
......................................................................................................................................TTATGGCGGCACCTCGTGG...................................................................................................................................1980.2520200000000
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCA...........................2380.2520200000000
...............TATTCTATAAAG---TATATCGG---TCAT...............................................................................................................................................................................................................................................2440.2510100000000
...........................................................TTGCCAAA-TAATCTTACCGCAGTA........................................................................................................................................................................................................2480.2520200000000
.......................................................................................................................................TATGGCGGCACCTCGTGGA..................................................................................................................................1980.2520200000000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTCAA..........................2780.2520200000000
.........................................................................TTACCGCAGTATGTCCTCCTGC----.........................................................................................................................................................................................22100.2020200000000
..............TTATTCTATAAAG---TATATCGG---TCA................................................................................................................................................................................................................................................2450.2010100000000
...........................................................................................................CTCGACAGTAAAAGAG-AAGCTTAAA.......................................................................................................................................................2550.2010100000000
..........................................................................................................TCTCGACAGTAAAAGAG-AAGCTTAA........................................................................................................................................................2550.2010100000000
.................................................TAATACAATGTTGCCAAA-TAATCTTACC..............................................................................................................................................................................................................2860.1710010000000
....................................................TACAATGTTGCCAAA-TAATCTTACCGCAG..........................................................................................................................................................................................................2960.1710100000000
.................................................TAATACAATGTTGCCAAA-TAATC...................................................................................................................................................................................................................2360.1710100000000
.................................................................................................................................................................................................................................................TTGCCTATCGCGGTCAACTATCGA...................2470.1410100000000
.................................................................................................................................................................................................................................................TTGCCTATCGCGGTCAACTATCGACC.................2670.1410100000000
...............................................................................................................................................................................................................................................GCTTGCCTATCGCGGTCAACTATCGAC..................2770.1410100000000
............................................................TGCCAAA-TAATCTTACCGCAGTATGTCC...................................................................................................................................................................................................2880.1310100000000
...........................................................................................................................................................................................................................................ACTAGCTTGCCTATCGCGGTCAAC.........................2480.1310100000000
..............................................................................................................................................................................................................................TACTAGATCTAATACTAGCTTGCCTA....................................2680.1310100000000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGTCT...........................2680.1310100000000
.................................................................................................................................................................................................................................................TTGCCTATCGCGGTCAACT........................1980.1310100000000
......................................................................................................................................................................................................................................CTAATACTAGCTTGCCTATCGCGG..............................2480.1310100000000
......................................................................................................................................TTATGGCGGCACCTCGTGT...................................................................................................................................1980.1310100000000
......................................................................................................................................TTATGGCGGCACCTCGTGGTGGC...............................................................................................................................2380.1310100000000
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCG...............................1980.1310100000000
.......................................................................................................................................TATGGCGGCACCTCGTGGTGGT...............................................................................................................................2280.1310100000000
....................................................................TAATCTTACCGCAGTATGTCCTCC................................................................................................................................................................................................2480.1310100000000
........................................................................................................................................................................................................................................AATACTAGCTTGCCTATCGC................................2080.1310100000000
..............................................................................................................................................................................................................................TACTAGATCTAATACTAGCTTGCC......................................2480.1310100000000
...............................................................................................................................................................................................................................ACTAGATCTAATACTAGCTTGCC......................................2380.1310100000000
.................................................................................................................................................................................................................................TAGATCTAATACTAGCTTGCCTA....................................2380.1310100000000
.........................................................TGTTGCCAAA-TAATCTTACCGCAGTA........................................................................................................................................................................................................2680.1310100000000
.......................................................................................................................................TATGGCGGCACCTCGTGGTGGC...............................................................................................................................2280.1310001000000
......................................................................................................................................TTATGGCGGCACCTCGTGGTG.................................................................................................................................2180.1310100000000
......................................................................................................................................TTATGGCGGCACCTCGTGGTA.................................................................................................................................2180.1310100000000
....................................................................TAATCTTACCGCAGTATGTCCTCCTG..............................................................................................................................................................................................2680.1310100000000
..........................................................................................................................................................................................................................................TACTAGCTTGCCTATCGCGGTCAA..........................2480.1310100000000
.................................................................................................................................................................................................................................TAGATCTAATACTAGCTTGCCTATC..................................2580.1310100000000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGGG.............................2480.1310100000000
...........................................................................................................................................................................................................................................ACTAGCTTGCCTATCGCGG..............................1980.1310100000000
............................................................................................................TCGACAGTAAAAGAG-AAGCT...........................................................................................................................................................2080.1310100000000
.................................................................................................................................................................................................................................TAGATCTAATACTAGCTTGCCTATCGCGG..............................2980.1310100000000
..................................................................................................................................................................................................TCAC-CTTCTAT--CGATATACATA-AAT.............................................................2590.1110100000000
..................................................................................................................................................................................................TCAC-CTTCTAT--CGATATACATA-AATA............................................................2690.1110100000000
.................................................................................................................................................................................................................................TAGATCTAATACTAGCTTG........................................1990.1110100000000
..........................................................................TACCGCAGTATGTCCTCCTGC----T........................................................................................................................................................................................22100.1010100000000
...............................................................................................................................................................................TCATTCGTGG-CTGGAAATTCAC-CTTC.................................................................................26100.1010100000000
..........................................................................TACCGCAGTATGTCCTCCTG..............................................................................................................................................................................................20100.1010100000000
..............................................................................................................................................................................TTCATTCGTGG-CTGGAAATTCAC-CT...................................................................................25100.1010100000000
.........................................................................TTACCGCAGTATGTCCTCCTG..............................................................................................................................................................................................21100.1010100000000
.......................................................................................................................................TATGGCGGCACCTCGTGAAA.................................................................................................................................20110.0910100000000
droPer2
GCTGGCTGGCTGTTTTATTCTATAAAG---TATATCGG---TCATAACCTAATACAATGTTGCCAAA-TAATCTTACCGCAGTATGTCCTCCTGC----TCTAACCTCTCGACAGTAAAAGAG-AAGCTTAAAATTATGGCGGCACCTCGTGGTGGCCGA--AAAATATGCCCGTTCATTCGTGG-CTGGAAATTCAC-CTTCTAT--CGATATACATA-AATACTAGATCTAATACTAGCTTGCCTATCGCGGTCAACTATCGACCGTCGACAG---------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................TGC----TCTAACCTCTCGACAGTAAAAGA..................................................................................................................................................................2623.507070000
...............TATTCTATAAAG---TATATCGG---TCATAA.............................................................................................................................................................................................................................................2620.501010000
...............TATTCTATAAAG---TATATCGG---TCA................................................................................................................................................................................................................................................2320.501010000
............................................................................................TGC----TCTAACCTCTCGACAGTAAA.....................................................................................................................................................................2320.501010000
.......................................................................................................................................................................................................................................TAATACTAGCTTGCCTATCGCGG..............................2320.501010000
.............................................................................................................................................................................................................................................TAGCTTGCCTATCGCGGTCAACTA.......................2420.501010000
.................................................................................................................................TAAAATTATGGCGGCACCTCGTGG...................................................................................................................................2440.502020000
...............................................................................................................................................................................................................................................................CAACTATCGACCGTCGAC...........1890.333300000
..............................................................................................................................................................................TTCATTCGTGG-CTGGAAATTCAC-CT...................................................................................2540.251010000
...............................................................................................................................................................................TCATTCGTGG-CTGGAAATTCAC-CT...................................................................................2440.251010000
droVir3
GG--------TGTTTTGTTCTAAACGGAT-TACATGGG---TTAGAACTTAGATAGATATTCCCTCA-GAATCTTACCGCAGTCTTTCCTCCTACGGCCTTCGAACTCAGGACAATAATCAGG-ACAATTTAAGTAATGGCGGCAAC-AATC-----CAAATACAGTGTGCGCGTACATTCAGAGGGCAAAAATACAAACTT-TCAGACAAT--AC-TT-AATACTAAAT------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................TACAGTGTGCGCGTACATTCAGAGGGC................................................................................................2712.002000000000000000000000000000200000000000000000000000000000000000
.....................AAACGGAT-TACATGGG---TTAGAACT...........................................................................................................................................................................................................................................2431.675300100000000000000000000100000000000000000000000000000000000000
..............................................................................GCAGTCTTTCCTCCTACGGCCTTCGAAC..................................................................................................................................................................................28201.5531000000000000000000000001507010108000170000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCTCC................................................................................................................................................................................................27191.4728004210000000000000000000050201000070114000000000000000000000000
.................................................................................................................................................................TACAGTGTGCGCGTACATTCAGAG...................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
....................TAAACGGAT-TACATGGG---TTAGAACTTA.........................................................................................................................................................................................................................................2730.672000000000000000000000000000000000000000000000100000000000010000
.........................................................................TTACCGCAGTCTTTCCTCCTACGGCC.........................................................................................................................................................................................26200.5511008100000000000000000000000000000000002000000000000000000000000
..................TCTAAACGGAT-TACATGGG---TTAGAAC............................................................................................................................................................................................................................................2620.501000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................TACAGTGTGCGCGTACATTCAGT....................................................................................................2320.501000000000000000000000000000000000001000000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCT..................................................................................................................................................................................................25190.377000000000000000000000000110000000030002000000000000000000000000
.....................AAACGGAT-TACATGGG---TTAGAACTT..........................................................................................................................................................................................................................................2530.331100000000000000000000000000000000000000000000000000000000000000
.......................ACGGAT-TACATGGG---TTAGAACTTAGA.......................................................................................................................................................................................................................................2630.331001000000000000000000000000000000000000000000000000000000000000
.....................AAACGGAT-TACATGGG---TTAGAACTTAG........................................................................................................................................................................................................................................2730.331000000000000000000000000000000000000010000000000000000000000000
.......................................................................TCTTACCGCAGTCTTTCCTCCTACGGCC.........................................................................................................................................................................................28200.306005100000000000000000000000000000000000000000000000000000000000
............................................................TCCCTCA-GAATCTTACCGCAGTCT.......................................................................................................................................................................................................24180.285000000000000000000000000100100000002100000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCC...................................................................................................................................................................................................24190.265000000000000000000000000020000000020100000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTT......................................................................................................................................................................................................21200.255000000200000000000000000001000000010001000000000000000000000000
.........................................................................TTACCGCAGTCTTTCCTCCTACGGCCT........................................................................................................................................................................................27200.204003000000000000000000000000000000000000001000000000000000000000
................................................................TCA-GAATCTTACCGCAGT.........................................................................................................................................................................................................18200.153000000001000000000000001000000000000001000000000000000000000000
..............................................................................GCAGTCTTTCCTCCTACGGCCTTCGA....................................................................................................................................................................................26200.153000000000000000000000000100010001000000000000000000000000000000
.........................................................................TTACCGCAGTCTTTCCTCCTACGGC..........................................................................................................................................................................................25200.153003000000000000000000000000000000000000000000000000000000000000
.......................................................................TCTTACCGCAGTCTTTCCTCC................................................................................................................................................................................................21200.153000000000000010000000000000000000001001000000000000000000000000
............................................................TCCCTCA-GAATCTTACCGCAGTCTT......................................................................................................................................................................................................25160.132000000000000000000000000001000000000010000000000000000000000000
........................................................ATATTCCCTCA-GAATCTTACCGCAGTCT.......................................................................................................................................................................................................28160.132000000000000000000000000011000000000000000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCTC.................................................................................................................................................................................................26190.112000000000000000000000000000100000010000000000000000000000000000
............................................................TCCCTCA-GAATCTTACCGCA...........................................................................................................................................................................................................20200.102001000000000000000000000000000000001000000000000000000000000000
....................................................................GAATCTTACCGCAGTCTTTCCTCC................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
.....................................................................AATCTTACCGCAGTCTTTCCTCCTA..............................................................................................................................................................................................25200.102000000000000000000000000010000000010000000000000000000000000000
.......................................................................TCTTACCGCAGTCTTTCCTCCT...............................................................................................................................................................................................22200.102000000000000000000000000000000000000002000000000000000000000000
..............................................................................GCAGTCTTTCCTCCTACGGCCTTC......................................................................................................................................................................................24200.102000000100000000000000000001000000000000000000000000000000000000
........................................................................CTTACCGCAGTCTTTCCTCC................................................................................................................................................................................................20200.102000000000000000000000000000000000010100000000000000000000000000
............................................................TCCCTCA-GAATCTTACCGCAGTCTTTCC...................................................................................................................................................................................................28150.071001000000000000000000000000000000000000000000000000000000000000
.........................................................TATTCCCTCA-GAATCTTACCGCAGTCT.......................................................................................................................................................................................................27160.061000000000000000000000000000000000000001000000000000000000000000
........................................................ATATTCCCTCA-GAATCTTACCGCAGT.........................................................................................................................................................................................................26160.061000000000000000000000000100000000000000000000000000000000000000
...........................................................TTCCCTCA-GAATCTTACCGCAGTCT.......................................................................................................................................................................................................25170.061000000000000000000000000000000000010000000000000000000000000000
..........................................................ATTCCCTCA-GAATCTTACCGCAGTC........................................................................................................................................................................................................25170.061000000000000000000000000000000000001000000000000000000000000000
.............................................................CCCTCA-GAATCTTACCGCAGTC........................................................................................................................................................................................................22180.061000000000000000000000000000000000000001000000000000000000000000
.................................................................CA-GAATCTTACCGCAGTCTTTCCTCCTAC.............................................................................................................................................................................................29180.061001000000000000000000000000000000000000000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTC....................................................................................................................................................................................................23190.051000000000000000000000001000000000000000000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCTCCT...............................................................................................................................................................................................28190.051001000000000000000000000000000000000000000000000000000000000000
...........................................................TTCCCTCA-GAATCTTACCGCAG..........................................................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
........................................................ATATTCCCTCA-GAATCTTACCG.............................................................................................................................................................................................................22200.051000000000000000000000000000000000000010000000000000000000000000
....................................................................................TTTCCTCCTACGGCCTTCGAACTCA...............................................................................................................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
.............................................................................CGCAGTCTTTCCTCCTACGGT..........................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCTTA................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................ATCTTACCGCAGTCTTTCCTCCTACGGCC.........................................................................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTCCTCCTACGGCCTTCG.....................................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................CTTACCGCAGTCTTTCCTCCTACGGCC.........................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
..............................................................................GCAGTCTTTCCTCCTACGGCCT........................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................AATCTTACCGCAGTCTTTCCTCCTAC.............................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................TTTCCTCCTACGGCCTTCGAACT.................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................ATTCCCTCA-GAATCTTACCGCAA..........................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................TACCGCAGTCTTTCCTCCTACGGCC.........................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................GCAGTCTTTCCTCCTACGGCCTTCGAA...................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
....................................................................GAATCTTACCGCAGTCTTTCCTCCT...............................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................TTCCCTCA-GAATCTTACCGC............................................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
.......................................................................TCTTACCGCAGTCTTTCCTCCTACGGCCT........................................................................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCTAT................................................................................................................................................................................................27200.051000000000000000000000000000000000000001000000000000000000000000
..........................................................................TACCGCAGTCTTTCCTCCTACGGCCT........................................................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................AATCTTACCGCAGTCTTTCCTCC................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
........................................................ATATTCCCTCA-GAATCTTACCGCAG..........................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
............................................................TCCCTCA-GAATCTTACCGCAG..........................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................AATCTTACCGCAGTCTTTCCTCCTACG............................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.......................................................................TCTTACCGCAGTCTTTCCTCCTACGGC..........................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................CTCCTACGGCCTTCGAACTCA...............................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................TCA-GAATCTTACCGCAGTCTTTCCTCA................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................CA-GAATCTTACCGCAGTCT.......................................................................................................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
droMoj3
CG--------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAACCGTCGGTTGATATTTCAGGCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAACCGTCGGTTGATATTTCAGG...26200.051010000
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAACCGTCGGTTGATATTTCAGG...27200.051010000
................................................................................................................................................................................................................................................................AATAACCGTCGGTTGATATTTCAGGC..26200.051010000
droBip1
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSizeHit CountTotal NormTotal
No Reads
droKik1
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSizeHit CountTotal NormTotal
No Reads
droFic1
AG--------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSizeHit CountTotal NormTotal
No Reads
droEle1
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSizeHit CountTotal NormTotal
No Reads
droRho1
GC--------CGTTTTATACTATAAAACT-GGCATCAGCAAATATAACCTAATACAATTTTACTAAGCTAAGCTTACCGCAGTGTGTCGTCATGC----TCTAACCACGCGACAAT----GCGGAAGCTTAAATCTATGGCGGCAATCTATGGTGGGC----AAAATATGACCGTTCATTCTTGGACTCAGAATCCATACAATTC---------AAATAAAATAATAGATGTA---CTAA--A-ACCATCAGGATTAACTATCGTGC-TCGACAGC------A-SizeHit CountTotal NormTotal
No Reads
droBia1
AG--------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSizeHit CountTotal NormTotal
No Reads
droTak1
GC--------CGTTTTATTCTGGAAATATTC----------TCTTAACCTACCACAATTCTGTTAAC-TAATCTTACCGCAGTATGTCCTCCTTA----ATTCACCACGCGACAATCAATGTGGAAGCTTAAAATCATAGCGCCAAA-CATGGCCGCT----CAAATATGACCGTTCAGCGGTCGAGATCAAATCCATACATTTCT--CGATATA-------TACTAAACTTAATCTTAA--GACCTATCG-GATGAACTATCGTCCGTCGACA----------SizeHit CountTotal NormTotal
No Reads
droEug1
GC--------CGTTTTATTCTGAAAATATTCACATTAT---ACATAACTTACCACAATTCTGTTAGC-TAATCTTACCGCAGTATGTCCTCCTTA----ATTCACTAAGCGACAATCAATGCG-GAACTTAA-ATCATAGCGGCAAATCACATCAGCC-----CAATGTGACCGTTCATCGGTCGAGAGCTAATCCATACATTTAT--CGATATA--TA-CGTACTAAACT--ATGTAAA--TAGCTATCG-GATGTACTATCGTACGTCGACAG---------SizeHit CountTotal NormTotal
No Reads
droSec2
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AA--------A-------------------TATATCGG---TTATTGCCTGATCCGATGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................TATTGCCTGATCCGATGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C22200.10200200000000
droEre2
GT--------GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAGCAGCTTTCGACTCCCTGAATTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:06 AM