ID:

dps_2110

 Coordinate:

Unknown_group_60:8742-8892 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.1 -13.9 -13.9

Flybase annnotation

exon [dpse_GLEANR_9656:3]; CDS [Dpse\GA29137-cds]; intron [Dpse\GA29137-in]

No Repeatable elements found

mature
  1. Unknown_singleton_3985:3864-3890 +
  2. dps_2110  Unknown_group_60:8746-8772 +
star
  1. Unknown_singleton_3985:3964-3983 +
  2. dps_2110  Unknown_group_60:8846-8865 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAACCGCAACGACGCCAGATGAACTTCGCTTTGCTTTACATTGCGTTATTTGGAACATTCAACAAACTCATTTTGCAGAGGACATCCGTTTACTTCAGAAGTACCAGACGGTCAAAAACATCCGTTGCTGCTGCCTAGTCCAAATTTGTATAGAACCGCCGCTTTCGTCAGACCCAAATTACTATAGCACTCTCACTATAGATCGCAGCGGACCGCTACGATGCGATTACGGACGTCAAGCAACGTTTTTG
******************************************************...................((((((((((..((((((((((...)))))...))))).....(((....)))((....))...))))...))))))........................***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 SRR902011
testis
 GSM343916
embryo
 SRR902012
CNS imaginal disc
 M059
embryo
 GSM444067
head
......................................................ACATTCAACAAACTCATTTTGCAGAGG.......................................................................................................................................................................... 27 0 2 1.50 3 0 0 0 3 0 0 0 0
...................................................................................................................................................................................................CTATAGATCGCAGCGGACC..................................... 19 0 2 1.50 3 3 0 0 0 0 0 0 0
..........................................................................................................................................................ACCGCCGCTTTCGTCAGACC............................................................................. 20 0 2 1.00 2 2 0 0 0 0 0 0 0
.............................................................................................TTCAGAAGTACCAGACGGTC.......................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................ATAGAACCGCCGCTTTCGTCA................................................................................. 21 0 2 1.00 2 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................CACTATAGATCGCAGCGGACC..................................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
.....................................................................ATTTTGCAGAGGACATCCGTT................................................................................................................................................................. 21 0 2 1.00 2 0 2 0 0 0 0 0 0
.........CGACGCCAGATGAACTTCGCT............................................................................................................................................................................................................................. 21 0 2 1.00 2 1 1 0 0 0 0 0 0
.................................................................................................................................................TTGTATAGAACCGCCGCTTTC..................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
........ACGACGCCAGATGAACTTCGC.............................................................................................................................................................................................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................ACTCTCACTATAGATCGCAGC.......................................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................CAAATTACTATAGCACTCTCACT...................................................... 23 0 2 1.00 2 0 0 2 0 0 0 0 0
.............................................................................................TTCAGAAGTACCAGACGGTCAAAAAC.................................................................................................................................... 26 0 2 1.00 2 0 0 2 0 0 0 0 0
.........................................................................................................................................................AACCGCCGCTTTCGTCAGAC.............................................................................. 20 0 2 1.00 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................ACCGCCGCTTTCGTCAGACCC............................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................TCTCACTATAGATCGCAGCGG........................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CGCAGCGGACCGCTACGATGC........................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
..........................................................................................TACTTCAGAAGTACCAGACGG............................................................................................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
.........................................................................................TTACTTCAGAAGTACCAGACGG............................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCGATTACGGACGTCAAGCA......... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................CATTCAACAAACTCATTTTGCAGAG........................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
......CAACGACGCCAGATGAACTTC................................................................................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..................ATGAACTTCGCTTTGCTTTAC.................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................TTCAGAAGTACCAGACGGTCAC........................................................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGATTACGGACGTCAAGCAAC....... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................................TGCCTAGTCCAAATTTGTATAGAACC.............................................................................................. 26 0 2 0.50 1 0 0 1 0 0 0 0 0
....CGCAACGACGCCAGATGAACTT................................................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................TTTTGCAGAGGACATCCGTTT................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................CTCACTATAGATCGCAGCGG........................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TTACTATAGCACTCTCACTAT.................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................TAGCACTCTCACTATAGATCG.............................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................ACATTGCGTTATTTGGAACA.................................................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................................................TGTATAGAACCGCCGCTTTCG.................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................CATTCAACAAACTCATTTTGCAGA............................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................CAAATTTGTATAGAACCGCCGT......................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0
............CGCCAGATGAACTTCGCTTTG.......................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................CGTTTACTTCAGAAGTACCAG................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................GCAGAGGACATCCGTTTACT............................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................AACCGCCGCTTTCGTCAGACC............................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGATTACGGACGTCAAGCAACT...... 22 1 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TTCGTCAGACCCAAATTACTA................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................................CCAAATTTGTATAGAACCGCC........................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................CAACGAACTCATTTTGCAGAG........................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................TTTGCAGAGGACATCCGTTTA............................................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
.....................................ACATTGCGTTATTTGGAACAT................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................CTTTACATTGCGTTATTTGGA..................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................ATTACTATAGCACTCTCACTA..................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................................................GTATAGAGCCGCCGCTTTCGT................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
..........GACGCCAGATGAACTTCGCTT............................................................................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
....................GAACTTCGCTTTGCTTTACAT.................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CAAATTACTATAGCACTCTCACTAT.................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACTATAGATCGCAGCGGACCG.................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................TGCAGAGGACATCCGTTTACT............................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................TTCAGAAGTACCAGACGGTCAT........................................................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................CCGCCGCTTTCGTCAGACCC............................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACGATACGATGACGGACGT............... 19 2 3 0.33 1 0 1 0 0 0 0 0 0
.................................................................................................................AAAAACATCCGTTGCTGCTGC..................................................................................................................... 21 0 14 0.21 3 3 0 0 0 0 0 0 0
...................................................................................ATCCGTTTTCTTCCGGAGTA.................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0
.......................................................................................................CCAGACGGTCAAAAACATCCGT.............................................................................................................................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0
.............................................................................................................GGTCAAAAACATCCGTTGCTG......................................................................................................................... 21 0 14 0.14 2 2 0 0 0 0 0 0 0
...............................................ATTTGGAACATTCAACAAACT....................................................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0
....................................................GAACATTCAACAAACTCATTTTG................................................................................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................TATCGCAGGGGACGGCTAC................................ 19 3 10 0.10 1 0 0 0 0 1 0 0 0
...................................................GGAACATTCAACAAACTCATT................................................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0
.....................................................................................................................ACATCCGTTGCTGCTGCCTAGT................................................................................................................ 22 0 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATCGCAGCGGACCGG................................... 15 1 11 0.09 1 0 0 0 0 0 1 0 0
........................................................................................................................TCCGTTGCTGCTGCCTAGTC............................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0 0 0
..........................................................................................................................CGTTGCTGCTGCCTAGTC............................................................................................................... 18 0 11 0.09 1 1 0 0 0 0 0 0 0
............................................................................................................................................................CGCCGCTTTCGTCAGACCC............................................................................ 19 0 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................................................................TCAAAAACATCCGTTGCTGCTGCCTA.................................................................................................................. 26 0 12 0.08 1 0 0 0 0 0 0 1 0
...................................................................................................................AAACATCCGTTGCTGCTGCCT................................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0
.............................................................................GAGGACATCCGTTTACTTCA.......................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACCGCTACGATGCGATTACG.................... 20 0 14 0.07 1 0 1 0 0 0 0 0 0
...............................................................................................................TCAAAAACATCCGTTGCTGCT....................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGCTACGATGCGATTACGG................... 19 0 14 0.07 1 1 0 0 0 0 0 0 0
..........................................................................................................GACGGTCAAAAACATCCGTTGCTG......................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CAAATGACTATAGCACTCTCACT...................................................... 23 1 14 0.07 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TATGGTCGTCAAGCAACG...... 18 2 16 0.06 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTTGGCGTTGCTGCGGTCTACTTGAAGCGAAACGAAATGTAACGCAATAAACCTTGTAAGTTGTTTGAGTAAAACGTCTCCTGTAGGCAAATGAAGTCTTCATGGTCTGCCAGTTTTTGTAGGCAACGACGACGGATCAGGTTTAAACATATCTTGGCGGCGAAAGCAGTCTGGGTTTAATGATATCGTGAGAGTGATATCTAGCGTCGCCTGGCGATGCTACGCTAATGCCTGCAGTTCGTTGCAAAAAC
*****************************************************************************...................((((((((((..((((((((((...)))))...))))).....(((....)))((....))...))))...))))))........................****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M022
male body		 M059
embryo
 GSM343916
embryo
.......................................................................................................GGTCTGCCAGTTTTTGTAGGCAAC............................................................................................................................ 24 0 6 6.17 37 17 18 2 0 0 0 0
.........................................................................................................................GGCAACGACGACGGATCAGGT............................................................................................................. 21 0 2 3.00 6 2 2 2 0 0 0 0
..........................................................................................................................GCAACGACGACGGATCAGGT............................................................................................................. 20 0 2 2.50 5 1 0 3 1 0 0 0
...................................................................................................TCATGGTCTGCCAGTTTTTGT................................................................................................................................... 21 0 2 2.00 4 3 0 0 1 0 0 0
.....................................................................................................ATGGTCTGCCAGTTTTTGTAGGCAAC............................................................................................................................ 26 0 6 2.00 12 11 1 0 0 0 0 0
.........................................................................................................................GGCAACGACGACGGATCAGGTTT........................................................................................................... 23 0 2 2.00 4 0 0 4 0 0 0 0
...............................................................................................................................GACGACGGATCAGGTTTAAACATAT................................................................................................... 25 0 2 1.50 3 0 3 0 0 0 0 0
..........................................................................................................................................................................................................................GCTACGCTAATGCCTGCAGTT............ 21 0 2 1.50 3 3 0 0 0 0 0 0
...................................................................AGTAAAACGTCTCCTGTAGGC................................................................................................................................................................... 21 0 2 1.50 3 3 0 0 0 0 0 0
...........................................................................................................................................................GGCGGCGAAAGCAGTCTGGGTTT......................................................................... 23 0 3 1.00 3 2 0 0 0 0 1 0
......................................................................................................................................................................................ATATCGTGAGAGTGATATCTA................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0
..........................................................................................................................GCAACGACGACGGATCAGGTTT........................................................................................................... 22 0 2 1.00 2 1 0 1 0 0 0 0
............GCGGTCTACTTGAAGCGAAAC.......................................................................................................................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0
.........................................................................................................................................CAGGTTTAAACATATCTTGGC............................................................................................. 21 0 2 1.00 2 0 0 0 0 2 0 0
......................................................................................................................GTAGGCAACGACGACGGATCAGGTTT........................................................................................................... 26 0 2 1.00 2 0 2 0 0 0 0 0
......................................................................................................TGGTCTGCCAGTTTTTGTAGGCAAC............................................................................................................................ 25 0 6 1.00 6 4 2 0 0 0 0 0
......................................................................................................................GTAGGCAACGACGACGGATCAGGTT............................................................................................................ 25 0 2 1.00 2 0 2 0 0 0 0 0
...................................................................................................................................ACGGATCAGGTTTAAACATAT................................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0
.....CGTTGCTGCGGTCTACTTGA.................................................................................................................................................................................................................................. 20 0 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................GGCAAATGAAGTCTTCATGGT................................................................................................................................................. 21 0 2 1.00 2 1 0 0 1 0 0 0
.....................TTGAAGCGAAACGAAATGTAA................................................................................................................................................................................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0
......................................................................................................................GTAGGCAACGACGACGGATCAG............................................................................................................... 22 0 11 0.55 6 6 0 0 0 0 0 0
................................................................................................................................ACGACGGATCAGGTTTAAAC....................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................GTCTTCATGGTCTGCCAGTTT....................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................GCAAATGAAGTCTTCATGGTC................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................................................................GCGAAAGCAGTCTGGGTTTAA....................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGCTACGCTAATGCCTGCAGTTCGT......... 26 0 2 0.50 1 0 0 0 1 0 0 0
.................................................................................................................................CGACGGATCAGGTTTAAACAT..................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0
..........................................................................CGTCTCCTGTAGGCAAATGA............................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................AGGCAAATGAAGTCTTCATG................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
.TTGGCGTTACTGCGATCTACT..................................................................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................................GCAACGACGACGGATCAGGTT............................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................................GCAACGACGACGGATCAGGTTTAAAC....................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0
GTTGGCGTTGCTGCGGTCTA....................................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
...................................................................................TAGGCAAATGAAGTCTTCATG................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
.....CGTTGCTGCGGTCTACTTGAA................................................................................................................................................................................................................................. 21 0 2 0.50 1 0 0 0 1 0 0 0
.......................................................................................................GGTCTGCCAGTTTTTGTAGGCAA............................................................................................................................. 23 0 6 0.50 3 3 0 0 0 0 0 0
..TGGCGTTACTGCGATCTACTT.................................................................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0
................................................................................................................................................................CGAAAGCAGTCTGGGTTTAAT...................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
...GGCGTTGCTGCGGTCTACTTG................................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
.........................................ACGCAATAAACCTTGTAAGT.............................................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................GGCAACGACGACGGATCAGGTTTA.......................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0
...............................................................................................GTCTTCATGGTCTGCCAGTT........................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................GTCTGGGTTTAATGATATCGT.............................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GTCGCCTGGCGATGCTACGCT......................... 21 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................TTCATGGTCTGCCAGTTTTTGTA.................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................................................................GCGAAAGCAGTCTGGGTTTGA....................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................................................CGACGACGGATCAGGTTTAAA........................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................................................................................GGCGGCGAAAGCAGTCTGGGTTTAAT...................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................AGAGTGATATCTAGCGTCGCC........................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
..............GGTCTACTTGAAGCGAAACGAAATGT................................................................................................................................................................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0
....................................................................................................................................................................AGCAGTCTGGGTTTAATGATA.................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................................................................AACATATCTTGGCGGCGAA....................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................................................................................CTGGGTTTAATGATATCGTGA............................................................ 21 0 2 0.50 1 0 0 0 1 0 0 0
........................................................................................................................................................CTTGGCGGCGAAAGCAGTCTG.............................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................TCGCCTGGCGATGCTACGCTA........................ 21 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................ACGACGACGGATCAGGTTTA.......................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................TGTAGGCAACGACGACGGATCAGGT............................................................................................................. 25 0 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................................TGTAGGCAACGACGACGGATCAGGTT............................................................................................................ 26 0 2 0.50 1 0 1 0 0 0 0 0
........................................................................................................................AGGCAACGACGACGGATCAGGTTT........................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0
....GCGTTGCTGCGGTCTACTTGA.................................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
.....................................TGTAACGCAATAAACCTTGTA................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................................................GACGGATCAGGTTTAAACATA.................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................................................................................................................AGTGATATCTAGCGTCGCCTG...................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CGCCTGGCGATGCTACGCTAA....................... 21 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................CGTCTCCTGTAGGCAAATGAAGTCT........................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................CGTCTCCTGTAGGCAAATGAA............................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................GATGCTACGCTAATGCCTGCA............... 21 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................AACGTCTCCTGTAGGCAAATG.............................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................AAGTCTTCATGGTCTGCCAG.......................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CGATGCTACGCTAATGCCTGC................ 21 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................................................ACGACGGATCAGGTTTAAACA...................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................CATGGTCTGCCAGTTTTTGTAGGCAAC............................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
.................................GAAATGTAACGCAATAAACCT..................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................ATGAAGTCTTCATGGTCTGCCAGT......................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................................................................................GGCGGCGAAAGCGGTCTGGGTTTAAT...................................................................... 26 1 2 0.50 1 0 1 0 0 0 0 0
..................................................................................................................................GACGGATCAGGTTTAAACAT..................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................TGAAGTCTTCATGGTCTGCC............................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................CAGTCTGGGTTTAATGATATC................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................................................................CATATCTTGACGGCGAAAGC.................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................ATCGTGAGAGTGATATCTAG............................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................................TTTTGTAGGCAACGACGACGGAT.................................................................................................................. 23 0 12 0.50 6 3 2 0 1 0 0 0
......................................................................................................................CTAGGCAACGACGACGGATCAGGTTT........................................................................................................... 26 1 2 0.50 1 0 0 1 0 0 0 0
..TGGCGTTGCTGCGGTCTACT..................................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
.........GCTGCGGTCTACTTGAAGCGAA............................................................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0
......................................GTAACGCAATAAACCTTGTAAGTTGT........................................................................................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0
......GTTGCTGCGGTCTACTTGA.................................................................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGCGGCGAAAGCAGTC................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................................................................................GGCGAAAGCAGTCTGGGTTTAATGAT................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0
......................................GTAACGTAATAAACCTTGTAAGTTGTT.......................................................................................................................................................................................... 27 1 8 0.38 3 3 0 0 0 0 0 0
......................................GTAACGTAATAAACCTTGTAAGTT............................................................................................................................................................................................. 24 1 8 0.38 3 3 0 0 0 0 0 0
......................................GTAACGTAATAAACCTTGTAAGTTGT........................................................................................................................................................................................... 26 1 8 0.38 3 3 0 0 0 0 0 0
..............................................................................................................................................................GGCGAAAGCAGTCTGGGTT.......................................................................... 19 0 11 0.36 4 2 0 2 0 0 0 0
.............................................................................................................................................................CGGCGAAAGCAGTCTGGGTTT......................................................................... 21 0 11 0.36 4 4 0 0 0 0 0 0
.......................................................................................................GGTCTGCCAGTTTTTGTAGG................................................................................................................................ 20 0 6 0.33 2 2 0 0 0 0 0 0
................................................................................................................GTTTTTGTAGGCAACGACGACGGAT.................................................................................................................. 25 0 12 0.33 4 1 0 3 0 0 0 0
.................................................................................TGTAGGCAAATGAAGTCTTCA..................................................................................................................................................... 21 0 3 0.33 1 0 0 0 0 1 0 0
...............................................................................................................AGTTTTTGTAGGCAACGACGACGGAT.................................................................................................................. 26 0 12 0.33 4 1 1 1 0 0 1 0
.......................................................................................................GGTCTGCCAGTTTTTGTAGGC............................................................................................................................... 21 0 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................................................GGCAACGACGACGGATCAG............................................................................................................... 19 0 11 0.27 3 3 0 0 0 0 0 0
................................................................................................................AATTTTGTAGGCAACGACGACGGA................................................................................................................... 24 2 12 0.25 3 0 3 0 0 0 0 0
........................................................................................................................................TCAGGTTTAAACATATCTTGA.............................................................................................. 21 1 9 0.22 2 2 0 0 0 0 0 0
........................................AACGTAATAAACCTTGTAAGTTGT........................................................................................................................................................................................... 24 1 10 0.20 2 1 1 0 0 0 0 0
.....CGTTGCTGGGCTCTACTTAA.................................................................................................................................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0 0 0
........................................AACGTAATAAACCTTGTAAGTTGTT.......................................................................................................................................................................................... 25 1 10 0.20 2 2 0 0 0 0 0 0
............................................................................................................................................................GCGGCGAAAGCAGTCTGGGT........................................................................... 20 0 11 0.18 2 0 0 2 0 0 0 0
....................................................................................................................TTGTAGGCAACGACGACGGATCAG............................................................................................................... 24 0 11 0.18 2 2 0 0 0 0 0 0
..............................................................................................................................................................GGCGAAAGCAGTCTGGGT........................................................................... 18 0 11 0.18 2 1 0 1 0 0 0 0
.......................................................................................................GGTCTGCCAGTTTTTGTAGGCAACGA.......................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0
........................................................................................................GTCTGCCAGTTTTTGTAGGCAA............................................................................................................................. 22 0 6 0.17 1 1 0 0 0 0 0 0
.............................................................................................................AAAGTTTTTGTAGGCAACGACGACGGAT.................................................................................................................. 28 2 12 0.17 2 1 0 0 0 0 1 0
........................................................................................................GTCTGCCAGTTTTTATAGGCAACGAC......................................................................................................................... 26 1 6 0.17 1 0 0 0 0 0 0 1
.............................................................................CTCCTGTAGGCAAATGAAGTC......................................................................................................................................................... 21 0 12 0.17 2 2 0 0 0 0 0 0
....................................................................................................................TTGTAGGCAACGACGACGGAT.................................................................................................................. 21 0 12 0.17 2 1 1 0 0 0 0 0
.......................................................................................................GGTCCGCCAGTTTTTGTAGGCAAC............................................................................................................................ 24 1 6 0.17 1 1 0 0 0 0 0 0
.............................................................................................................CCAGTTTTTGTAGGCAACGACGACGGA................................................................................................................... 27 0 12 0.17 2 2 0 0 0 0 0 0
........................................................................................................GTCTGCCAGTTTTTGTAGGCAAC............................................................................................................................ 23 0 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................ATGGTCTGCCAGTTTTTGTAGGCAA............................................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................ATGGTCTGCCAGTTTTTGTAG................................................................................................................................. 21 0 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................ATGGTCTGCCAGTTTTTGTAGGCAACG........................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CCTGGCGATGCTACGCTAATG..................... 21 0 13 0.15 2 2 0 0 0 0 0 0
.....................................TGTAACGTAATAAACCTTGTAAGT.............................................................................................................................................................................................. 24 1 8 0.13 1 1 0 0 0 0 0 0
...................................................CCTTGTAAGTTGTTTGAGTAA................................................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0
............................................................................TCTCCTGTAGGCAAATGAAGT.......................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0
...................................................CCTTGTAAGTTGTTTGAGT..................................................................................................................................................................................... 19 0 10 0.10 1 0 0 1 0 0 0 0
.........................................ACGTAATAAACCTTGTAAGTTGT........................................................................................................................................................................................... 23 1 10 0.10 1 1 0 0 0 0 0 0
.............................................................................................................................................................CGGCGAAAGCAGTCTGGGATT......................................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0
..................................................................................................................TTTTGTAGGCAACGACGACGGATCAG............................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0 0
..............................................................................................................................................................GGCGAAAGCAGTCTGGGTTTA........................................................................ 21 0 11 0.09 1 1 0 0 0 0 0 0
.............................................................................................................................................................CGGCGAAAGCAGTCTGGGT........................................................................... 19 0 11 0.09 1 0 0 0 1 0 0 0
......................................................................................................................GTAGGCAACGACGACGGATCTA............................................................................................................... 22 2 11 0.09 1 0 0 1 0 0 0 0
........................................................................................................................AGGCAACGACGACGGATCAG............................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0 0
.......................................................................................................................TAGGCAACGACGACGGATCAG............................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0
......................................................................................................................GTAGGCAACGACGACGGATC................................................................................................................. 20 0 11 0.09 1 1 0 0 0 0 0 0
..............................................................................................................................................................GGCGAAAGCAGTCTGGGTTT......................................................................... 20 0 11 0.09 1 0 1 0 0 0 0 0
................................................................................................................................................................CGAAAGCAGTCTGGGTTTA........................................................................ 19 0 12 0.08 1 0 0 0 1 0 0 0
.....................................................................................................................TGTAGGCAACGACGACGGAT.................................................................................................................. 20 0 12 0.08 1 0 1 0 0 0 0 0
.............................................................................................................CCAGTTTTTGTAGGCAACGACGACGGAT.................................................................................................................. 28 0 12 0.08 1 1 0 0 0 0 0 0
..................................................................................................................AATTGTAGGCAACGACGACGGAT.................................................................................................................. 23 2 12 0.08 1 1 0 0 0 0 0 0
..............................................................................................................CAGTTTTTGTAGGCAACGACGACGGATG................................................................................................................. 28 1 12 0.08 1 1 0 0 0 0 0 0
.................................................................................................................TTTTTGTAGGCAACGACGACGGAT.................................................................................................................. 24 0 12 0.08 1 0 0 0 1 0 0 0
.............................................................................................................................................................TGGCGAAAGCAGTCTGGGT........................................................................... 19 1 12 0.08 1 0 0 0 1 0 0 0
...............................................................................................................AGTTTTTGTAGGCAACGACGACTGAT.................................................................................................................. 26 1 12 0.08 1 1 0 0 0 0 0 0
......................................................................................................................ATAGGCAACGACGACGGAT.................................................................................................................. 19 1 12 0.08 1 0 1 0 0 0 0 0
.............................................................................CTCCTGTAGGCAAATGAAGT.......................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0 0
...................................................................................................................TTTGTAGGCAACGACGACGGAT.................................................................................................................. 22 0 12 0.08 1 1 0 0 0 0 0 0
......................................................................................................................GTAGGCAACGACGACGGAT.................................................................................................................. 19 0 12 0.08 1 1 0 0 0 0 0 0
...........................................................................................................TGCCAGTTTTTGTAGGCAACGACG........................................................................................................................ 24 0 14 0.07 1 1 0 0 0 0 0 0
................................................................................................................GTTTTGGTAGGCAACGACGACGGAT.................................................................................................................. 25 1 14 0.07 1 0 0 1 0 0 0 0
..........................................................................................................CTGCCAGTTTTTGTAGGCAACGACG........................................................................................................................ 25 0 14 0.07 1 1 0 0 0 0 0 0
..........................................................................................................CTGCCAGTTTTTGTAGGCAACGACGACG..................................................................................................................... 28 0 14 0.07 1 1 0 0 0 0 0 0
............................................................................................................GCCAGTTTTTGTAGGCAACGACGA....................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0 0
.........................................................................................................TCTGCCAGTTTTTGTAGGCAAC............................................................................................................................ 22 0 14 0.07 1 1 0 0 0 0 0 0
...............................................................................................................AGTTTTGGTAGGCAACGACGACGGAT.................................................................................................................. 26 1 14 0.07 1 0 1 0 0 0 0 0
.............................................................................................................CCAGTTTTTGTAGGCAACGG.......................................................................................................................... 20 1 14 0.07 1 1 0 0 0 0 0 0
..........................................................................................................CTGCCAGTTTTTGTAGGCAACGAC......................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0 0
.........................................................................................................TCTGCCAGTTTCTGGAGGTAA............................................................................................................................. 21 3 16 0.06 1 0 0 0 0 0 0 1
......................................................................................................................................................................................................................................CCGGCAGTTCGTTGCAAAAAC 21 1 16 0.06 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_60:8692-8942 + dps_2110 CAACCGCAACGACGCCAGATGAACTTCGCTTTGCTTTACATTGCGTTATTTGGAACATTCAACA-AACTCATTTTGCAGAGGACATCCGTTTACTTCAGAAGTACCAGACGGTCAAAAACATCC-GTTGCTGCTG---CCTAGTCCAAATTTGT--ATAGAACCGCCGCTTTCGTCAGACCCAAATTACTATAGCACTCTCACTATAGATCGCAG--------------------------------------------------------------------CGGACCGCTACGATGCGATTACGGACGTCAAGCAACGTTTTTG
droPer2 scaffold_78:188556-188857 + CAACCGCAACGACGCCAGATGAACTTCGCTTTGCTTTACATTGCGTTATTTGGAACATTCAACA-AACTCATTTTGCAGAGGACATCCGTTTACTTCAGAAGTACCAGACGGTCAAAAACATCC-GTTGCTGCTG---CCTAGTCCAAATTTGT--ATAGAACCGCCGCTTTCGTCAGACCCAAATGACTATAGCACTCTCACTATAGATCGCACTAGTGCGATCACTACCTGAGAGGTCTCTCGAGAATATCAATATGTCAAAT-----------------ATGGACCGCTACGATGCGATTACGGACGTCAAGCAACGTTTTTG
droVir3 scaffold_13045:297779-297878 + CGCC---GCCATGCCCAGAAGAACTTCTCCACGCGTTGCACTGCATCATCAGGATCATTAAACA-GCACTATTTTAAGGAAGATTTGCAATTGCTAAGGAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6320:3853-3939 + CGCCCTCGCCATCACCACAAGAGATGCAGCGTGCATTTAATTGCATTATTTGGAATCTGCAGCA-GCAACACTTCGCAGATGAAATTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14966:36746-36915 + AAACAACTTTGTCATCCGAGGAACTACGCAATGCATCCTATTGCATAATTTGGAACATCCAGCA-ATTATCATTCGTCGAAGACATTCGCCAACTGCAAAAAGATCAACCACTTAGAAGCCATCTATAGTTTCTGAATCCTTTTCTAGGTCGGTCCACAGAATTTTCACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302311:139354-139463 - CCA--TCGCCTACGCCAACGGAATTGCAGCGGGCGCTGCATTGCATCGTCTGGAATATCCAAAC-CAATCACTTCGCTCAAGAGATATCATCGGTCCTGAAGGGCCAGCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000451647:7382-7497 + CGGCTGGATTGACATCGGAGGAATAACAACATGCATCCAACTGCATCATATGGAATCTCCAACA-GCAATCGTTTTCAATAGAATTTCCGCTGCTACAAAAATCTCGACCGCTGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000489435:12798-13027 + CGACTACGCCTTCCCTGTTGGAACTGCGAAGAGCC-TACTTTGCATCGCATGGAACCTACAGCA-GCATTACTTTTTAGAGGAAATAACTCTTCTGCAAAAGTGCGCAACGGTTCGTAACCATTTAAAGTTTTTATCTCCCTTTCT----------------------------------------------------------ACAGGTCATAG-----------------------------------ATGGATACAACCTGCTTCTGGTCGGCGGTCGGCTGGAACTTCACCAGGTCCAGACTCCCA-TAAGCACCCTTACTA
droRho1 scf7180000777358:768-879 + CGAGGTCACTTTCCCCACTGGAACTGCGAAGGGCCATGCTTTGCGTCGCATGGAACCTACAACA-GCGATATTTCATCGAGGAAATAACTCTCTTGCAAAAAGGCGCGCCGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301320:17778-17893 - AACCCTCAGT----ATGGAAGAACTAGAACACGCAGCAAACTGCATAACATGGAATCTTCAGAC-CCACTCGTTTTCAGAAGAACTCCCTTACCTCAGGAAAAATCAAGTACTTAAAGGTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412247:10317-10428 + C--------CGGCCGCAGATGAACTTCGACGCGCGATGCATTGTATTGTTTGGAATTTACAAAC-GAAGTACTTCAACGAGGAATTTAACCTGCTGCAAAGGAGCAAGCCTATTCGAAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408388:2995-3206 + CGCTT------ACATCGGAAGAACTTCGCCGAGCATTGTTCAGCATCGTCTACAATATTCAGTCAACAGTCGTTCCTTGAAGATTTTCACTCGCTGCAGAAAGCTAAGCCGCTTACAAGTCACCTAAAGTATTTAACGCCTTT--------------------------------------------------------TCTCGACAGCTCATCA-----------------------------------ACACATGCGTCCAGC-----------------CTGGAACGATTCGACGCCGTGACCGCGAGCAAACAACAGTTTTG
droSim2 node_109074:854-965 + CACCTTCGCCGACGCCAGCAGAACTGATGCGGGCGCTACATTGCATCGTCTGGAATATTCAAAC-TATTCACTTCGCTCAAGAGATGTCCTCGGTCCTGAAGGGCCATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_4493:5603-5725 - CACCTTCGCCGACGCCAGCAGAACTGATGCGGGCGCTACATTGCATCGTCTGGAATATTCAAAC-TATTCACTTCGCTCAAGAGATGTCCTCGGTCCTGAAGGGCCATCCGATTCGCAATAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:168106-168217 + CACCTTCTCCAACGCCAGCAGAATTGCATCGGGCGCTACATTGCATCGTCTGAAATATTTAAAC-CATTCATTTCGGTCAAGAGATGTCATCGGTTCAGCAGGGCCATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAACCGCAACGACGCCAGATGAACTTCGCTTTGCTTTACATTGCGTTATTTGGAACATTCAACA-AACTCATTTTGCAGAGGACATCCGTTTACTTCAGAAGTACCAGACGGTCAAAAACATCC-GTTGCTGCTG---CCTAGTCCAAATTTGT--ATAGAACCGCCGCTTTCGTCAGACCCAAATTACTATAGCACTCTCACTATAGATCGCAG--------------------------------------------------------------------CGGACCGCTACGATGCGATTACGGACGTCAAGCAACGTTTTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................ACATTCAACA-AACTCATTTTGCAGAGG....................................................................................................................................................................................................................................................2721.5030000000030
..........................................................................................................................................................................................................CTATAGATCGCAG--------------------------------------------------------------------CGGACC.....................................1921.5030300000000
.................................................................................................................................................................ACCGCCGCTTTCGTCAGACC.................................................................................................................................................2021.0020200000000
..............................................................................................TTCAGAAGTACCAGACGGTC....................................................................................................................................................................................................................2021.0020200000000
............................................................................................................................................................ATAGAACCGCCGCTTTCGTCA.....................................................................................................................................................2121.0020100001000
........................................................................................................................................................................................................CACTATAGATCGCAG--------------------------------------------------------------------CGGACC.....................................2121.0020200000000
......................................................................ATTTTGCAGAGGACATCCGTT...........................................................................................................................................................................................................................................2121.0020000002000
.........CGACGCCAGATGAACTTCGCT........................................................................................................................................................................................................................................................................................................2121.0020100001000
......................................................................................................................................................TTGT--ATAGAACCGCCGCTTTC.........................................................................................................................................................2121.0020200000000
........ACGACGCCAGATGAACTTCGC.........................................................................................................................................................................................................................................................................................................2121.0020200000000
...................................................................................................................................................................................................ACTCTCACTATAGATCGCAG--------------------------------------------------------------------C..........................................2121.0020200000000
.....................................................................................................................................................................................CAAATTACTATAGCACTCTCACT..........................................................................................................................2321.0020000000200
..............................................................................................TTCAGAAGTACCAGACGGTCAAAAAC..............................................................................................................................................................................................................2621.0020000000200
................................................................................................................................................................AACCGCCGCTTTCGTCAGAC..................................................................................................................................................2021.0020200000000
.................................................................................................................................................................ACCGCCGCTTTCGTCAGACCC................................................................................................................................................2121.0020200000000
.....................................................................................................................................................................................................TCTCACTATAGATCGCAG--------------------------------------------------------------------CGG........................................2121.0020200000000
..................................................................................................................................................................................................................CGCAG--------------------------------------------------------------------CGGACCGCTACGATGC...........................2121.0020200000000
...........................................................................................TACTTCAGAAGTACCAGACGG......................................................................................................................................................................................................................2121.0020200000000
..........................................................................................TTACTTCAGAAGTACCAGACGG......................................................................................................................................................................................................................2220.5010100000000
.........................................................................................................................................................................................................................................................................................................GCGATTACGGACGTCAAGCA.........2020.5010100000000
.......................................................CATTCAACA-AACTCATTTTGCAGAG.....................................................................................................................................................................................................................................................2520.5010100000000
......CAACGACGCCAGATGAACTTC...........................................................................................................................................................................................................................................................................................................2120.5010100000000
..................ATGAACTTCGCTTTGCTTTAC...............................................................................................................................................................................................................................................................................................2120.5010100000000
..............................................................................................TTCAGAAGTACCAGACGGTCAC..................................................................................................................................................................................................................2220.5010100000000
..........................................................................................................................................................................................................................................................................................................CGATTACGGACGTCAAGCAAC.......2120.5010100000000
.....................................................................................................................................TG---CCTAGTCCAAATTTGT--ATAGAACC..................................................................................................................................................................2620.5010000000100
....CGCAACGACGCCAGATGAACTT............................................................................................................................................................................................................................................................................................................2220.5010100000000
.......................................................................TTTTGCAGAGGACATCCGTTT..........................................................................................................................................................................................................................................2120.5010100000000
......................................................................................................................................................................................................CTCACTATAGATCGCAG--------------------------------------------------------------------CGG........................................2020.5010100000000
.........................................................................................................................................................................................TTACTATAGCACTCTCACTAT........................................................................................................................2120.5010100000000
...............................................................................................................................................................................................TAGCACTCTCACTATAGATCG..................................................................................................................2120.5010100000000
.....................................ACATTGCGTTATTTGGAACA.............................................................................................................................................................................................................................................................................2020.5010100000000
.......................................................................................................................................................TGT--ATAGAACCGCCGCTTTCG........................................................................................................................................................2120.5010100000000
.......................................................CATTCAACA-AACTCATTTTGCAGA......................................................................................................................................................................................................................................................2420.5010100000000
.................................................................................................................................................CAAATTTGT--ATAGAACCGCCGT.............................................................................................................................................................2220.5010100000000
............CGCCAGATGAACTTCGCTTTG.....................................................................................................................................................................................................................................................................................................2120.5010100000000
.......................................................................................CGTTTACTTCAGAAGTACCAG..........................................................................................................................................................................................................................2120.5010100000000
...........................................................................GCAGAGGACATCCGTTTACT.......................................................................................................................................................................................................................................2020.5010100000000
................................................................................................................................................................AACCGCCGCTTTCGTCAGACC.................................................................................................................................................2120.5010100000000
..........................................................................................................................................................................................................................................................................................................CGATTACGGACGTCAAGCAACT......2220.5010100000000
..........................................................................................................................................................................TTCGTCAGACCCAAATTACTA.......................................................................................................................................2120.5010100000000
................................................................................................................................................CCAAATTTGT--ATAGAACCGCC...............................................................................................................................................................2120.5010100000000
........................................................................TTTGCAGAGGACATCCGTTTA.........................................................................................................................................................................................................................................2120.5010000001000
.....................................ACATTGCGTTATTTGGAACAT............................................................................................................................................................................................................................................................................2120.5010100000000
.................................CTTTACATTGCGTTATTTGGA................................................................................................................................................................................................................................................................................2120.5010100000000
........................................................................................................................................................................................ATTACTATAGCACTCTCACTA.........................................................................................................................2120.5010100000000
..........GACGCCAGATGAACTTCGCTT.......................................................................................................................................................................................................................................................................................................2120.5010100000000
....................GAACTTCGCTTTGCTTTACAT.............................................................................................................................................................................................................................................................................................2120.5010100000000
.....................................................................................................................................................................................CAAATTACTATAGCACTCTCACTAT........................................................................................................................2520.5010100000000
.........................................................................................................................................................................................................ACTATAGATCGCAG--------------------------------------------------------------------CGGACCG....................................2120.5010000001000
..........................................................................TGCAGAGGACATCCGTTTACT.......................................................................................................................................................................................................................................2120.5010100000000
..............................................................................................TTCAGAAGTACCAGACGGTCAT..................................................................................................................................................................................................................2220.5010100000000
..................................................................................................................................................................CCGCCGCTTTCGTCAGACCC................................................................................................................................................2030.3310100000000
..................................................................................................................AAAAACATCC-GTTGCTGCTG---C...........................................................................................................................................................................................21140.2130300000000
........................................................................................................CCAGACGGTCAAAAACATCC-GT.......................................................................................................................................................................................................2260.1710100000000
..............................................................................................................GGTCAAAAACATCC-GTTGCTG..................................................................................................................................................................................................21140.1420200000000
...............................................ATTTGGAACATTCAACA-AACT.................................................................................................................................................................................................................................................................21100.1010100000000
....................................................GAACATTCAACA-AACTCATTTTG..........................................................................................................................................................................................................................................................23100.1010100000000
...................................................GGAACATTCAACA-AACTCATT.............................................................................................................................................................................................................................................................21100.1010100000000
......................................................................................................................ACATCC-GTTGCTGCTG---CCTAGT......................................................................................................................................................................................22110.0910100000000
................................................................................................................................................................................................................ATCGCAG--------------------------------------------------------------------CGGACCGG...................................15110.0910000000001
.........................................................................................................................TCC-GTTGCTGCTG---CCTAGTC.....................................................................................................................................................................................20110.0910100000000
...........................................................................................................................C-GTTGCTGCTG---CCTAGTC.....................................................................................................................................................................................18110.0910100000000
...................................................................................................................................................................CGCCGCTTTCGTCAGACCC................................................................................................................................................19110.0910100000000
................................................................................................................TCAAAAACATCC-GTTGCTGCTG---CCTA........................................................................................................................................................................................26120.0810010000000
....................................................................................................................AAACATCC-GTTGCTGCTG---CCT.........................................................................................................................................................................................21120.0810100000000
..............................................................................GAGGACATCCGTTTACTTCA....................................................................................................................................................................................................................................20120.0810100000000
..............................................................................................................................................................................................................................................................................................ACCGCTACGATGCGATTACG....................20140.0710000001000
................................................................................................................TCAAAAACATCC-GTTGCTGCT................................................................................................................................................................................................21140.0710100000000
................................................................................................................................................................................................................................................................................................CGCTACGATGCGATTACGG...................19140.0710100000000
...........................................................................................................GACGGTCAAAAACATCC-GTTGCTG..................................................................................................................................................................................................24140.0710100000000
droPer2
CAACCGCAACGACGCCAGATGAACTTCGCTTTGCTTTACATTGCGTTATTTGGAACATTCAACA-AACTCATTTTGCAGAGGACATCCGTTTACTTCAGAAGTACCAGACGGTCAAAAACATCC-GTTGCTGCTG---CCTAGTCCAAATTTGT--ATAGAACCGCCGCTTTCGTCAGACCCAAATGACTATAGCACTCTCACTATAGATCGCACTAGTGCGATCACTACCTGAGAGGTCTCTCGAGAATATCAATATGTCAAAT-----------------ATGGACCGCTACGATGCGATTACGGACGTCAAGCAACGTTTTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................AATGACTATAGCACTCTCACTATAG......................................................................................................................2520.501010000
..............................................................................................................GGTCAAAAACATCC-GTTGCTGCTG---............................................................................................................................................................................................24200.051010000
.........................................................................................................................TCC-GTTGCTGCTG---CCTAGTC.....................................................................................................................................................................................20200.051010000
................................................................................................................TCAAAAACATCC-GTTGCTGCTG---CC..........................................................................................................................................................................................24200.051010000
................................................................................................................TCAAAAACATCC-GTTGCTGCT................................................................................................................................................................................................21200.051010000
droVir3
CGCC---GCCATGCCCAGAAGAACTTCTCCACGCGTTGCACTGCATCATCAGGATCATTAAACA-GCACTATTTTAAGGAAGATTTGCAATTGCTAAGGAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CGCCCTCGCCATCACCACAAGAGATGCAGCGTGCATTTAATTGCATTATTTGGAATCTGCAGCA-GCAACACTTCGCAGATGAAATTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................TGCAGCA-GCAACACTTCGCAGATG....................................................................................................................................................................................................................................................2480.131100000
.............................................TTATTTGGAATCTGCAGCA-GC...................................................................................................................................................................................................................................................................2190.111100000
......................................AATTGCATTATTTGGAATCTGCAGC.......................................................................................................................................................................................................................................................................2590.111100000
......................................AATTGCATTATTTGGAATCTGCAG........................................................................................................................................................................................................................................................................2490.111100000
..............................................TATTTGGAATCTGCAGCA-GCA..................................................................................................................................................................................................................................................................2190.111100000
......................................AATTGCATTATTTGGAATCTGCA.........................................................................................................................................................................................................................................................................2390.111100000
droGri2
AAACAACTTTGTCATCCGAGGAACTACGCAATGCATCCTATTGCATAATTTGGAACATCCAGCA-ATTATCATTCGTCGAAGACATTCGCCAACTGCAAAAAGATCAACCACTTAGAAGCCATCTATAGTTTCTGAATCCTTTTCTAGGTCGGTCCACAGAATTTTCACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droKik1
CCA--TCGCCTACGCCAACGGAATTGCAGCGGGCGCTGCATTGCATCGTCTGGAATATCCAAAC-CAATCACTTCGCTCAAGAGATATCATCGGTCCTGAAGGGCCAGCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGGCTGGATTGACATCGGAGGAATAACAACATGCATCCAACTGCATCATATGGAATCTCCAACA-GCAATCGTTTTCAATAGAATTTCCGCTGCTACAAAAATCTCGACCGCTGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGACTACGCCTTCCCTGTTGGAACTGCGAAGAGCC-TACTTTGCATCGCATGGAACCTACAGCA-GCATTACTTTTTAGAGGAAATAACTCTTCTGCAAAAGTGCGCAACGGTTCGTAACCATTTAAAGTTTTTATCTCCCTTTCT----------------------------------------------------------ACAGGTCATAG-----------------------------------ATGGATACAACCTGCTTCTGGTCGGCGGTCGGCTGGAACTTCACCAGGTCCAGACTCCCA-TAAGCACCCTTACTASizeHit CountTotal NormTotal
No Reads
droRho1
CGAGGTCACTTTCCCCACTGGAACTGCGAAGGGCCATGCTTTGCGTCGCATGGAACCTACAACA-GCGATATTTCATCGAGGAAATAACTCTCTTGCAAAAAGGCGCGCCGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AACCCTCAGT----ATGGAAGAACTAGAACACGCAGCAAACTGCATAACATGGAATCTTCAGAC-CCACTCGTTTTCAGAAGAACTCCCTTACCTCAGGAAAAATCAAGTACTTAAAGGTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
C--------CGGCCGCAGATGAACTTCGACGCGCGATGCATTGTATTGTTTGGAATTTACAAAC-GAAGTACTTCAACGAGGAATTTAACCTGCTGCAAAGGAGCAAGCCTATTCGAAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CGCTT------ACATCGGAAGAACTTCGCCGAGCATTGTTCAGCATCGTCTACAATATTCAGTCAACAGTCGTTCCTTGAAGATTTTCACTCGCTGCAGAAAGCTAAGCCGCTTACAAGTCACCTAAAGTATTTAACGCCTTT--------------------------------------------------------TCTCGACAGCTCATCA-----------------------------------ACACATGCGTCCAGC-----------------CTGGAACGATTCGACGCCGTGACCGCGAGCAAACAACAGTTTTGSizeHit CountTotal NormTotal
No Reads
droSim2
CACCTTCGCCGACGCCAGCAGAACTGATGCGGGCGCTACATTGCATCGTCTGGAATATTCAAAC-TATTCACTTCGCTCAAGAGATGTCCTCGGTCCTGAAGGGCCATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droYak3
CACCTTCGCCGACGCCAGCAGAACTGATGCGGGCGCTACATTGCATCGTCTGGAATATTCAAAC-TATTCACTTCGCTCAAGAGATGTCCTCGGTCCTGAAGGGCCATCCGATTCGCAATAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....TTCGCCGACGCCAGCAGAACTGATGC........................................................................................................................................................................................................................................................................................................26200.5511001000000010
..CCTTCGCCGACGCCAGCAGAACTGA...........................................................................................................................................................................................................................................................................................................25200.45900000000009
................................................................................AGAGATGTCCTCGGTCCTGAAGGG..............................................................................................................................................................................................................................24200.45900000000009
....TTCGCCGACGCCAGCAGAACT.............................................................................................................................................................................................................................................................................................................21200.25500000000005
.....TCGCCGACGCCAGCAGAACTGATG.........................................................................................................................................................................................................................................................................................................24200.15303000000000
................................................................................AGAGATGTCCTCGGTCCTGAAGGGC.............................................................................................................................................................................................................................25200.05100010000000
........................................................................................CCTCGGTCCTGAAGGGCCATCCGA......................................................................................................................................................................................................................24200.05101000000000
.........CGACGCCAGCAGAACTGATGCGGG.....................................................................................................................................................................................................................................................................................................24200.05101000000000
.......................................................................................TCCTCGGTCCTGAAGGGCCATCCGA......................................................................................................................................................................................................................25200.05101000000000
.....................................................................................TGTCCTCGGTCCTGAAGGGCCATCCGA......................................................................................................................................................................................................................27200.05101000000000
............................................................................................GGTCCTGAAGGGCCATCCGATTCG..................................................................................................................................................................................................................24200.05101000000000
...............................................................................................CCTGAAGGGCCATCCGATTCGC.................................................................................................................................................................................................................22200.05100000010000
...................................................................TTCACTTCGCTCAAGAGATGTCCTCGG........................................................................................................................................................................................................................................27200.05101000000000
....................................................GAATATTCAAAC-TATTCACTTCGCTC.......................................................................................................................................................................................................................................................26200.05101000000000
....TTCGCCGACGCCAGCAGAACTGATG.........................................................................................................................................................................................................................................................................................................25200.05101000000000
....TTCGCCGACGCCAGCAGAAC..............................................................................................................................................................................................................................................................................................................20200.05100100000000
CACCTTCGCCGACGCCAGCAGAACTGA...........................................................................................................................................................................................................................................................................................................27200.05100100000000
droEre2
CACCTTCTCCAACGCCAGCAGAATTGCATCGGGCGCTACATTGCATCGTCTGAAATATTTAAAC-CATTCATTTCGGTCAAGAGATGTCATCGGTTCAGCAGGGCCATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:06 AM