ID:

dps_2108

 Coordinate:

Unknown_group_60:4367-4517 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.0 -17.6 -17.3

Flybase annnotation

exon [dpse_GLEANR_9656:2]; CDS [Dpse\GA29137-cds]; intron [Dpse\GA29137-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTCAGTGACGTGACCAAACGATATCTGATCGTGGCACTCATCGACCGCAGCGAGGAGAATGGCAAGATGACAGCGGCACAGTGGAAGTTGGTGCATGCGCGTCTTGTCGACGCACTGTTTGGGCATATGGAGGAAGAACCCGCGGCCCCAATTCCCACTTTCGATAGTGCTGGGTGACTCAATGGGGTTAAAATCCTAAAGTGCAATGACGACCCTAAGGTGGCTGACGCGCACGGCCTCCCAATTGTGGG
**************************************************************************************************************.((((((((((((.((.(((.((............))))))).)))).....)))))))).................**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 GSM444067
head
 GSM343916
embryo
 V112
male body		 M022
male body		 M059
embryo
..............................GTGGCACTCATCGAACGCAGCGAGG.................................................................................................................................................................................................... 25 1 6 2.83 17 3 5 8 0 0 0 1 0
..............................GTGGCACTCATCGACCGCAGCGA...................................................................................................................................................................................................... 23 0 6 2.33 14 14 0 0 0 0 0 0 0
..............................................................................................................CGCACTGTTTGGGCATATGGAGG...................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................ATGACGACCCTAAGGTGGC........................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................AGCGAGGAGAATGGCAAG......................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................ACGCACTGTTTGGGCATATGGAG....................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................CATGTCGACGCACTATTTGGGC............................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................CAAGAGGACAGCGGCACAA.......................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0
..............................GTGGCACTCATCGAACGCAGCGAG..................................................................................................................................................................................................... 24 1 6 1.00 6 2 2 1 0 0 1 0 0
..............................................................................................................CGCACTGTTTGGGCATATGGAGGA..................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................GTGGCACTCATCGACCGCAGCGAGG.................................................................................................................................................................................................... 25 0 6 1.00 6 6 0 0 0 0 0 0 0
................................................................................................................................................................TCGATAGTGCTGGGTGACTCAATGGGG................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................CGCACTGTTTGGGCATATGG......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................GTGGCACTCATTGACCGCAGCGAG..................................................................................................................................................................................................... 24 1 9 0.89 8 7 0 0 0 0 0 0 1
..............................GTGGCACTCATTGACCGCAGCGAGG.................................................................................................................................................................................................... 25 1 9 0.89 8 5 0 2 0 0 0 1 0
..............................GTGGCACTCATCGACCGCAGCG....................................................................................................................................................................................................... 22 0 6 0.83 5 5 0 0 0 0 0 0 0
..............................GTGGCACTCATCGAACGCAGCGA...................................................................................................................................................................................................... 23 1 6 0.67 4 3 0 0 0 0 0 0 1
..............................GTGGCACTCATCGACCGCAGCGAG..................................................................................................................................................................................................... 24 0 6 0.67 4 3 1 0 0 0 0 0 0
..............................GTGGCACTCATTGACCGCAGCGAGGA................................................................................................................................................................................................... 26 1 9 0.56 5 0 4 1 0 0 0 0 0
..............................GTGGCACTCATCGACCGCAG......................................................................................................................................................................................................... 20 0 6 0.50 3 3 0 0 0 0 0 0 0
..............................GTGGCACTCATCGAACGCAGCGAGGA................................................................................................................................................................................................... 26 1 6 0.50 3 0 3 0 0 0 0 0 0
.............................CGTGGCACTCATCGAACGCAGCGA...................................................................................................................................................................................................... 24 1 6 0.50 3 0 3 0 0 0 0 0 0
....................................................................................................................................................................................................TGAAGTGCAATGACGACCC.................................... 19 1 4 0.50 2 1 0 0 0 1 0 0 0
.......................TCTGATCGTGGCACTCATCGACC............................................................................................................................................................................................................. 23 0 8 0.38 3 0 3 0 0 0 0 0 0
...............................................................................................................................TGGAGGACGAACCCGGGG.......................................................................................................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAAGTGCAATGACGACCC.................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................GTGGCACTCATCGACCGCAGC........................................................................................................................................................................................................ 21 0 6 0.33 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................TAAAGTGCAATGACGACA..................................... 18 1 3 0.33 1 0 0 0 0 1 0 0 0
..............................GTGGCACTCATCGAACGCAGCG....................................................................................................................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0
......................................................GAGAATGGAAAGATGACA................................................................................................................................................................................... 18 1 4 0.25 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATCGAACGCAGCGA...................................................................................................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0
..............................TTGGCACTCATCGACCGCAGCG....................................................................................................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0
..............................GTGGCACTCATCGACCGCAGCGAGGA................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0
..........................GATCGTGGCACTCATCGACCGC........................................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATCGACCGCAGCG....................................................................................................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATCGACCGCGGCGAGG.................................................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0
..............................................................CAAGATGTCAGCGGCACAGTGGAATT................................................................................................................................................................... 26 2 12 0.17 2 0 2 0 0 0 0 0 0
.............................CGTGGCACTCATCGAACGCAGCGAG..................................................................................................................................................................................................... 25 1 6 0.17 1 0 0 1 0 0 0 0 0
..............................TTGGCACTCATCGACCGCAGCGAG..................................................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0
.......................TCTGATCGTGGCACTCATCGACCGCA.......................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0
.............................CGTGGCACTCATCGACCGCAGC........................................................................................................................................................................................................ 22 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATCGACCGCAGCGA...................................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATCGACCGCAGCGAGG.................................................................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0
.................................GCACTCATCGACCGCAGCGAGGA................................................................................................................................................................................................... 23 0 6 0.17 1 0 0 0 0 0 1 0 0
..............................GTGGCACTCATCGACCGCA.......................................................................................................................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACGGTCCTAAGGTAGCTGA........................ 19 3 7 0.14 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TAAAGTGCAATGACGACAA.................................... 19 2 7 0.14 1 1 0 0 0 0 0 0 0
........................CTGATCGTGGCACTCATCGACCG............................................................................................................................................................................................................ 23 0 8 0.13 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATTGACCGCAGCGAG..................................................................................................................................................................................................... 23 1 9 0.11 1 1 0 0 0 0 0 0 0
.............................CGTGGCACTCATTGACCGCAGCGAGG.................................................................................................................................................................................................... 26 1 9 0.11 1 1 0 0 0 0 0 0 0
...............................TGGCACTCATTGACCGCAGCGAGG.................................................................................................................................................................................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTAAGGTGGCTAGCGCGCACG................ 21 2 9 0.11 1 1 0 0 0 0 0 0 0
.................................GCACTCATTGACCGCAGCGAGGA................................................................................................................................................................................................... 23 1 9 0.11 1 1 0 0 0 0 0 0 0
..................................CACTCATTGACCGCAGCGAGG.................................................................................................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0
.................................GCACTCATTGACCGCAGCGAGG.................................................................................................................................................................................................... 22 1 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGTGGCTAGCGCGCAC................. 19 2 10 0.10 1 0 0 0 0 1 0 0 0
..........................................................................................................................................................................TGGGTGACTCATGGGGTTT.............................................................. 19 3 20 0.10 2 0 0 0 0 0 2 0 0
......................ATCTGATCGTGGCACTCATTGACCG............................................................................................................................................................................................................ 25 1 11 0.09 1 0 0 1 0 0 0 0 0
.....................................................................................................................TTTGGGCATGCGGGGGAAGA.................................................................................................................. 20 3 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................CAAGATGTCAGCGGCACAGTGGAAGT................................................................................................................................................................... 26 1 12 0.08 1 0 1 0 0 0 0 0 0
..........................GATCGTGGCACTCATCGACCG............................................................................................................................................................................................................ 21 0 18 0.06 1 1 0 0 0 0 0 0 0
..........................................................ATGGCAAGATGGCATAGGC.............................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACCCTAAGGTGGCTGACGCG.................... 20 0 20 0.05 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................ACAATAACGATCCTAAGGT.............................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................TGGCAAGATGACCGCAGAA............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

CAGTCACTGCACTGGTTTGCTATAGACTAGCACCGTGAGTAGCTGGCGTCGCTCCTCTTACCGTTCTACTGTCGCCGTGTCACCTTCAACCACGTACGCGCAGAACAGCTGCGTGACAAACCCGTATACCTCCTTCTTGGGCGCCGGGGTTAAGGGTGAAAGCTATCACGACCCACTGAGTTACCCCAATTTTAGGATTTCACGTTACTGCTGGGATTCCACCGACTGCGCGTGCCGGAGGGTTAACACCC
****************************************************************.((((((((((((.((.(((.((............))))))).)))).....)))))))).................************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 M022
male body		 V112
male body		 GSM444067
head
 M062
head
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTT............................................. 26 0 6 402.17 2413 1225 916 210 37 14 8 2 0 1
.....................................................................................................................................................................................TACCCCAATTTTAGGATTTCACGTT............................................. 25 0 6 44.67 268 156 85 22 5 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGT.............................................. 25 0 6 20.67 124 114 8 2 0 0 0 0 0 0
......................................................................................................................................................................................ACCCCAATTTTAGGATTTCACGTT............................................. 24 0 6 13.50 81 52 24 3 2 0 0 0 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCACGTT............................................. 26 1 6 7.33 44 0 1 43 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGGT............................................. 26 1 6 7.17 43 0 0 43 0 0 0 0 0 0
.......................................................................................................................................................................................CCCCAATTTTAGGATTTCACGTT............................................. 23 0 6 6.83 41 21 13 6 0 0 1 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACCTT............................................. 26 1 6 3.50 21 2 0 19 0 0 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTAGGATTTCACGT.............................................. 24 0 6 3.33 20 20 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CCCAATTTTAGGATTTCACGTT............................................. 22 0 6 2.83 17 10 6 1 0 0 0 0 0 0
................TTGCTATAGACTAGCACCGTGAGT................................................................................................................................................................................................................... 24 0 1 2.00 2 1 0 0 0 1 0 0 0 0
.....................AAAGACTAGCACCGTGAGT................................................................................................................................................................................................................... 19 1 1 2.00 2 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................TTACCTCAATTTTAGGATTTCACGTT............................................. 26 1 6 1.67 10 1 9 0 0 0 0 0 0 0
...................................................................................................................................................................................ATTACCCCAATTTTAGGATTTCACGTT............................................. 27 1 6 1.67 10 3 7 0 0 0 0 0 0 0
.....................ATGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 19 1 4 1.25 5 5 0 0 0 0 0 0 0 0
....................AAAAGACTAGCACCGTGAGT................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.................TGCTATAGACTAGCACCGTGAGT................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CGGTTACCCCAATTTTAGGATTTCACGTT............................................. 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTTACCCCAATTTTAGGATTTCACGTT............................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACCCCAATTTTAGGATTTCACGT.............................................. 23 0 6 1.00 6 6 0 0 0 0 0 0 0 0
.................................................CGCTCCTCTTACCGTTCTACTGT................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTTAG........................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................GGGGTTAAGGGTGAAAGCTAT..................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTTAAT.......................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................ATAGACTACCACCGTGAGT................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTTC............................................ 27 1 6 1.00 6 6 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACTTCAATTTTAGGATTTCACGTT............................................. 26 2 6 1.00 6 0 4 0 2 0 0 0 0 0
.......................................................................................................................................................................................CCCCAATTTTAGGATTTCACGT.............................................. 22 0 6 1.00 6 6 0 0 0 0 0 0 0 0
.............GGTTTGCTATAGACTAGCACCGTGA..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCATGTT............................................. 26 1 6 0.83 5 0 0 5 0 0 0 0 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCACGGT............................................. 26 2 6 0.83 5 0 0 5 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTC.................................................. 21 0 6 0.67 4 3 0 1 0 0 0 0 0 0
...........................................................AACGTTCTACTGGCGCCGTGTCACCTT..................................................................................................................................................................... 27 2 5 0.60 3 3 0 0 0 0 0 0 0 0
...............GTTGCTATACACCAGCACCGT....................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................TTACCCCAATTTCAGGATTTCACGTT............................................. 26 1 6 0.50 3 0 3 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGTTTTCACGTT............................................. 26 1 6 0.50 3 0 0 3 0 0 0 0 0 0
................................................................................................CGCGCAGAACAGCTGCGTGACAAA................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................CTCACCGTTCTACAGTCGCCGTGTCACCTT..................................................................................................................................................................... 30 2 2 0.50 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCAATTTTAGGATTTCACGTT............................................. 21 0 6 0.50 3 1 1 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATT.................................................... 19 0 6 0.50 3 2 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................CACCCCAATTTTAGGATTTCACGGT............................................. 25 2 6 0.50 3 0 0 3 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACG............................................... 24 0 6 0.50 3 3 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCAC................................................ 23 0 6 0.50 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAATTTTAGGATTTCACGTT............................................. 21 2 7 0.43 3 3 0 0 0 0 0 0 0 0
...................AAATGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 21 3 5 0.40 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ATACCCCAATTTTAGGATTTCACGTT............................................. 26 1 6 0.33 2 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTT................................................... 20 0 6 0.33 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................CGTGTACCCCCCTCTTGGGCG............................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCGCGTT............................................. 26 1 6 0.33 2 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCACGTG............................................. 26 2 6 0.33 2 0 0 2 0 0 0 0 0 0
....................AATAGACTAGCACTGTGAGT................................................................................................................................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGCCCCAATTTTAGGATTTCACGGT............................................. 26 2 6 0.33 2 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACATT............................................. 26 1 6 0.33 2 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................CACCCCAATTTTAGGATTTCACGTT............................................. 25 1 6 0.33 2 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................................TTCATTTACCCCAATTTTAGGATTTCACGTT............................................. 31 3 6 0.33 2 0 2 0 0 0 0 0 0 0
....................AAAAGACTAGCACCGTGAG.................................................................................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCCCAATTTTAGGATTTCACG............................................... 21 0 6 0.33 2 2 0 0 0 0 0 0 0 0
............................AGCACCGTGAGTAGCTGGCGTCGCTCCT................................................................................................................................................................................................... 28 0 6 0.33 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CCCAATTTTAGGATTTCACGT.............................................. 21 0 6 0.33 2 0 2 0 0 0 0 0 0 0
......................................GTAGCTGGCGTCGCTCCTCTT................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTTT............................................ 27 1 6 0.33 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CAATTTTAGGATTTCACGTT............................................. 20 0 6 0.33 2 0 1 0 1 0 0 0 0 0
.................................CGTGAGTAGCTGGCGTCGCTCCTCTT................................................................................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCACAATTTTAGGATTTCACGTT............................................. 26 1 6 0.33 2 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACACCAATTTTAGGATTTCACGTT............................................. 26 1 7 0.29 2 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGACTTCACGTT............................................. 26 1 11 0.27 3 2 0 1 0 0 0 0 0 0
.............GGTTTGCTATGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0
.....................AAAGACTAGCACCGGGAGT................................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0
........................GACTAGCACCGTGAGTAGCTGGC............................................................................................................................................................................................................ 23 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..............................................................GTTCTACTGGCGCCGTGTCACCTTGAC.................................................................................................................................................................. 27 3 4 0.25 1 1 0 0 0 0 0 0 0 0
.................TGCTATGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0
....................AATGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GGGCACAGGGGTTAAGGGT.............................................................................................. 19 2 17 0.24 4 1 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GGGATTCCACCGATCGCGCGTGC................ 23 2 9 0.22 2 2 0 0 0 0 0 0 0 0
.................................CGTGAGTAACTGGCGTCGCTCCT................................................................................................................................................................................................... 23 1 9 0.22 2 1 0 0 0 0 0 1 0 0
............................AGCACCGTGAGTAACTGGCGTCGCTCCT................................................................................................................................................................................................... 28 1 9 0.22 2 2 0 0 0 0 0 0 0 0
...........................................................AAAGTTCTACTGGCGCCGTGTCACCTT..................................................................................................................................................................... 27 3 5 0.20 1 0 0 1 0 0 0 0 0 0
....................CCTAGACTAGCACCGTGAGT................................................................................................................................................................................................................... 20 2 10 0.20 2 0 0 0 2 0 0 0 0 0
..................GCTATGGCCTAGCACCGGGAGT................................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 1 0 0 0 0
...........................................................AACGTTCTACTGGCGCCGTGTCACCT...................................................................................................................................................................... 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.....................AAGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTACCCCAATTTTAGGATTTCACGTTA............................................ 28 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTTGGATTTCACGTT............................................. 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTCGGCTTTCGCGTT............................................. 26 3 6 0.17 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTAGGGTTTCACGTT............................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................TGAGTAGCTGGCGTCGCTCCT................................................................................................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACCGT............................................. 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................TAACCCAATTTTAGGATTTCACGT.............................................. 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................................CGTTCTACGGTCGCCGTGTCACCTT..................................................................................................................................................................... 25 1 12 0.17 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCGATTTTAGGATTTCACGTT............................................. 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCATGTT............................................. 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0
..........................CTAGCACCGTGAGTAGCTGGCGTCG........................................................................................................................................................................................................ 25 0 6 0.17 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCACGTC............................................. 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................AATTACCCCAATTTTAGGATTTCACGTT............................................. 28 1 6 0.17 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................ACCCCAATTTTAGGATTTCACG............................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GCGCGTGTTGGAGGGTTA...... 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................ATACCCCAATTTTAGGATTTCATGGT............................................. 26 3 6 0.17 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CCCCAATTTTAGGATTTCATGTT............................................. 23 1 6 0.17 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTAGGATTTTACGTT............................................. 25 1 6 0.17 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCA................................................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................CTAGCACCGTGAGTAGCTGGCGT.......................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCAAGTT............................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTAGGATTTCACG............................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
............................AGCACCGTGAGTAGCTGGCGCCGCT...................................................................................................................................................................................................... 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATCTCACGTT............................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCATGGT............................................. 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................ACAATTTTAGGATTTCACGTT............................................. 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...............................ACCGTGAGTAGCTGGCGCCGCT...................................................................................................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTCGGATTTCACGTT............................................. 25 1 6 0.17 1 0 1 0 0 0 0 0 0 0
..........................CTAGCACCGTGAGTAGCTTGCGT.......................................................................................................................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCATGGT............................................. 26 3 6 0.17 1 0 0 1 0 0 0 0 0 0
....................AAAGGACTAGCACCGTGAGT................................................................................................................................................................................................................... 20 3 12 0.17 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGCCCCAATTTTAGGATTTCACGTT............................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TAACCCCAATTTTAGGATTTCACGGT............................................. 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTCCACGTT............................................. 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................CCCAATTTTAGGATTTCACCTT............................................. 22 1 6 0.17 1 0 0 1 0 0 0 0 0 0
..................................GTGAGTAGCTGGCGTCGCTCCT................................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAACTTACCCCAATTTTAGGATTTCACGTT............................................. 30 3 6 0.17 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAACCCCAATTTTAGGATTTCACGTT............................................. 27 3 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTAGGATTTCACGGT............................................. 25 1 6 0.17 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTC............................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CTTACCCCAATTTTAGGATTTCACGGT............................................. 27 2 6 0.17 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACGTG............................................. 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCCATTTTAGGATTTCACGTT............................................. 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CTTACCCCAATTTTAGGATTTCACGTT............................................. 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTAACGTT............................................. 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................TGACCCCAATTTTAGGATTTCACGTT............................................. 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................TACCCCAATTTTAGGATT.................................................... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CTACCCCAATTTTAGGATTTCACGCT............................................. 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0
....................................GAGTAGCTTGCGTCGCTCCT................................................................................................................................................................................................... 20 1 6 0.17 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................TTACCCCTATTTTAGGATTTCACGTT............................................. 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGATTTCACCT.............................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAAGATTTCACGTT............................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
..............................CACCGTGAGTAGCTGGCGTCGCTCCT................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTGAGGATTTCACGTT............................................. 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTGGGATTTCACGTT............................................. 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................ATTACCCCAATTTTAGGATTTCACCTT............................................. 27 2 6 0.17 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTTTAGGGTTTCACGTT............................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................AACGTTCTACAGTCGCCGTGTCACCTT..................................................................................................................................................................... 27 2 13 0.15 2 2 0 0 0 0 0 0 0 0
....................AAAAGACTAGCACCGTGATT................................................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TATCCCAATTTTAGGATTTCACGTT............................................. 25 1 7 0.14 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TTATCCCAATTTTAGGATTTCACGTT............................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTTTCCCAATTTTAGGATTTCACGTT............................................. 26 2 7 0.14 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................CAAATTTTAGGATTTCACGTT............................................. 21 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GGGATTCCACCGACTGCGCGTGCC............... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGATTCCACCGATCGCGCGTGCC............... 23 2 8 0.13 1 1 0 0 0 0 0 0 0 0
.....................................................................................................AGAACAGCTGCGTGAT...................................................................................................................................... 16 1 8 0.13 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATTCCACCGATCGCGCGTGCCAGAGG.......... 27 3 8 0.13 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................GGTTAAGGGTGCAAGCT....................................................................................... 17 1 8 0.13 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................TGGGCGCCGGGGTTACGGGT.............................................................................................. 20 1 9 0.11 1 1 0 0 0 0 0 0 0 0
.......................AGACTAGCACCGTGAGTAGCT............................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0 0
....................................GAGTAACTGGCGTCGCTCCT................................................................................................................................................................................................... 20 1 9 0.11 1 1 0 0 0 0 0 0 0 0
..........................CTAGCACCGTGAGTAACTGGCGTCGCTC..................................................................................................................................................................................................... 28 1 9 0.11 1 0 0 1 0 0 0 0 0 0
........................GACTAGCACCGTGAGTAGCT............................................................................................................................................................................................................... 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0
................................................................................................................................CCCCCCTCTTGGGCGCCGGA....................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................ATTAGGATTTCACGTT............................................. 16 1 11 0.09 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GTACCCCAATTTTAGGATTTCACGTT............................................. 26 1 11 0.09 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................ATGGGCACAGGGGTTAAGGGT.............................................................................................. 21 3 11 0.09 1 1 0 0 0 0 0 0 0 0
...............................................................................................ACGCGCAGAGCAGCTGCGTGACAAA................................................................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TTGGCGCCGGGGTTACGGGT.............................................................................................. 20 2 11 0.09 1 1 0 0 0 0 0 0 0 0
...........................................................ACCGTTCTACAGTCGCCGTGTCACCT...................................................................................................................................................................... 26 1 12 0.08 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCAATGTTAGGAGTTCACGTT............................................. 21 2 12 0.08 1 0 0 1 0 0 0 0 0 0
..............................................................GTTCTACAGTCGCCGTGTCACCTTAA................................................................................................................................................................... 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0
..........................................................AACCGTTCTACAGTCGCCGTGTCACCTT..................................................................................................................................................................... 28 2 12 0.08 1 0 1 0 0 0 0 0 0 0
...........................................................ACCGTTCTACAGTCGCCGTGTCACCTT..................................................................................................................................................................... 27 1 12 0.08 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CCCAATGTTAGGAGTTCACGTT............................................. 22 2 12 0.08 1 0 1 0 0 0 0 0 0 0
............................................................CCGGTCTACTGCTGCCGTGT........................................................................................................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0
..............................................................GTTCTACGGTCGCCGTGTCACCTT..................................................................................................................................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCCCAATGTTAGGAGTTCACGTT............................................. 23 3 13 0.08 1 0 0 0 0 1 0 0 0 0
...........................................................AACGTTCTACAGTCGCCGTGTCACCT...................................................................................................................................................................... 26 2 13 0.08 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTACCCCAATTATAGGATTTCACGTT............................................. 26 1 14 0.07 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GGGATTCCACCGACTGCGCATGCCGG............. 26 1 14 0.07 1 0 0 1 0 0 0 0 0 0
......................................TTAACTGGCGTCGCTCCT................................................................................................................................................................................................... 18 2 16 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................CGGTCGCCGTGTCACCTT..................................................................................................................................................................... 18 1 18 0.06 1 1 0 0 0 0 0 0 0 0
.........................ACTAGCACCGTGAGTAGCT............................................................................................................................................................................................................... 19 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................CTTGGGCGCCGGGGGTACGT................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................TCGGGTGCCGGAGCGTTAA..... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGATTCCACCGACTGCGCATGCAGA............. 25 3 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_60:4317-4567 + dps_2108 GTCAGTGA---CGTGACCAAACGATATCTGATCGTGGCACTCATCGACCGCAGCGAGGAGAATGGCAAGATGACAGCGGCACAGTGGAAGTTGGTGCATGCGCGTCTTGTCGACGCACTGTTTGGGCATATGGAGGAAGAACCCGCG-GCCCCAATTCCCACTTT-CGATAGTGCTGGGTGACTCAATGGGGTTAAAATCCTAAAGTGCAATGACGACCCT-----AAGGTGGCTGACGCGCACGGCCTCCCA-----------------------------------------ATT---------GTGGG
droPer2 scaffold_309:3393-3648 - GTCAGTGA---CGTGACCAAACGATATCTGATCGTGGCACTCATCGACCGCAGCGAGGAGAATGGCAAGATGACAGCGGCATAGTGGAAGCTGGTGCATGCGCGTCTTGTCGACGCACTGTTTGGGCACATGGAGGAAGAACCCGCG-GCCCCAATTCCCACTTT-CGATAGTGCTGGGTGACTCAATGGGGTTAAAATCCTAAAGTGCAATGACGACCCAACCCTAAGGTGGCTGACGCGCACGGCCTCCCA-----------------------------------------ATT---------GTGGG
droWil2 scf2_1100000004961:2381578-2381844 + C-CAGCGA---GATGGCCAGA-------TGATCGTTGCACTAATCGACCGTAGCGATGG-AACGAAAGAATTACGGCAGAGAACTGGAGTCAGGAAAAGTTCAAGTCGCTGAACGCCATTCTCATGAGGATGGC----GACCACGGGAACGTCCCCACCCACATT-TGATGGTACGCGGTAGTCTAGTGTCT----------------AGGGAAGGAGCCAAGCTGGAAGTATTGAACAGAACTAGTATTCCATCCGTACCAAAGGCCAAGGTCCTTCTTAAGCAGGTCCTTCAACT-----------GTT
droVir3 scaffold_12963:5335113-5335301 + AT-------------------------CTGATTGTGGCGCTCATTGATAAAAGCAATTTTTCCGGCAAGATTTCACCCAGCCAATGGCAGTTGGTCGAGACCAAGCTGGTGGATGCCCTGCTCCAAAGCATGGCCAA---ACCCGACAGCATACCCGC-CCGCTT-TGACGATGCCGGTTGGCAAACTGGGGTCAAGCTTATCGGTTGCGGAGATGACC--------------------------------------------------------------------------------------------
droKik1 scf7180000301925:32713-32968 - GTCAGTGA---GGTGACCAAACGACACTTGATCGTGGCCCTCATTGACAGAAGCGATAAAGCCGGCAAAATGACCGAGGCACAGTGGAAGATGGTGCATGCGCGGCTCGTTGAGTCATTGTACGCACGGATGGAGGAAGATCCCGAA-GCTCCCATGCCCACCTT-TGATGGCGCTGGGTGGCTAAATGGGGTCAAAATCCTAAAGTGCATGGATGACCCGACGAGAAAGTGGCTGACGCAAGCGGTCTGCCA-----------------------------------------GTTG---------AAGG
droFic1 scf7180000452125:11411-11656 - GGCAGTGATAATGTGCC----CGACACTTGATTGTGGCACTCATTGACCGAGGTGATGAGAACGGCAAGATGACCGAGGCGCGGTGGAAGACAGTGTACGCGCGACTTGTGGAATCGCTGCTCGCACGGATGGATGAGGCCCTAACA-GCTCCCATGCC----------------TGGGTGGCGGAAT---GTCAAAGTCCTGAAGTGCTGGAACGACCCAACTCTGGGATGGCTGACGCAAACGGTCAGCCA-----------------------------------------ACTAATTGCTTTGTAGA
droEle1 scf7180000490485:6677-6935 - GTCAGTGA---AGTGACCAAACGACGTTTGATCGTGACCCTCATCGACCGGAGCGATTAGAAAGGGAAGAAGACGGAAGCGTGGCGAAAGACGGTGC------GACGGCTCGAAAACTTCTTCGCGCGGATGGAGGAAGATCGCAAC-ACCCTCACGCAAATATT-CGATGGTGCAGAGTCGCTGAACGTGGTAAAAATCTTCAAATGTAACGACGAGCCTACCTTGAAGTGGCAGACGCAAACGGTCCGCCA-----------------------------------------GATGGAAGCTTTGTGGG
droBia1 scf7180000301698:28722-28957 - GTC------------GTCAACCGACACATAATCGTGGCAATCATTGACAGGGACGACGAGAATGGGAAGATGATGGAGGCGTCCTTAAAGATCGTTCATGCGCGCCTCGTTTAGTCTCTCTTTGCACCGATAGAAGAGGCACCCACA-GCCCACAT--------TGGGCTGGTGCAGGGTAGTTGAACGGTGTCAAAATCCTGAAGTGCAACGACGATTCGACCAAG-------------AAACGGTATGCCA-----------------------------------------ACTAGAAGCGTTGTGGG
droTak1 scf7180000414290:8633-8884 - -TCAGTGA---TGTAGTCAACCGACACCTGATCGCGGCACTCATTGACAGGAACGACGAAAATGGGAAGATGACGGAGGCGCGCTGGAAGATCGTCCATGCGCGACTGATCGAGTCTCTCTTTGCACGGATGGATGAATCACCCACAAGCCCCCATGCCCACATT-CGATGGTGCAGGGTGGTTGAACGGCGTGAAAATCCTGAAGTGCAACGACGATCCGACCAGGAAGTGGCTGACGCAAACGGTCTGCCA-----------------------------------------ACTG-------------
droYak3 v2_chr2h_random_004:916692-916952 + G----TGA---GGCGACCAAACGAAACTTGATCGTGGCACTCATCGACAGAAGCGATGAAGCCGACAAGATGACCGAGCCGCGGTGGAAGTTGGTGCATGCGCGACTCGTTGAGTCATTGTTTGCACGGATGGAGGAAGCTCCTGAG-GCCCCCATGCCCACTTT-TGATGGTGCCGGGTGGCTGAACGGGGTCAAAATCCCGAAGTGCATGGATGACCCGACGAGAAAGTGGCTGACGCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCGTTGTGGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTCAGTGA---CGTGACCAAACGATATCTGATCGTGGCACTCATCGACCGCAGCGAGGAGAATGGCAAGATGACAGCGGCACAGTGGAAGTTGGTGCATGCGCGTCTTGTCGACGCACTGTTTGGGCATATGGAGGAAGAACCCGCG-GCCCCAATTCCCACTTT-CGATAGTGCTGGGTGACTCAATGGGGTTAAAATCCTAAAGTGCAATGACGACCCT-----AAGGTGGCTGACGCGCACGGCCTCCCA-----------------------------------------ATT---------GTGGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................GTGGCACTCATCGACCGCAGCGA...............................................................................................................................................................................................................................................................2362.331401400000000
.................................................................................................................CGCACTGTTTGGGCATATGGAGG...............................................................................................................................................................................2312.0020000000200
..................................................................................................................................................................................................................ATGACGACCCT-----AAGGTGGC.............................................................................1911.0010100000000
...................................................AGCGAGGAGAATGGCAAG..................................................................................................................................................................................................................................................1811.0010100000000
................................................................................................................ACGCACTGTTTGGGCATATGGAG................................................................................................................................................................................2311.0010000000100
.................................................................................................................CGCACTGTTTGGGCATATGGAGGA..............................................................................................................................................................................2411.0010100000000
.................................GTGGCACTCATCGACCGCAGCGAGG.............................................................................................................................................................................................................................................................2561.0060600000000
....................................................................................................................................................................T-CGATAGTGCTGGGTGACTCAATGGGG.......................................................................................................................2711.0010100000000
.................................................................................................................CGCACTGTTTGGGCATATGG..................................................................................................................................................................................2011.0010100000000
.................................GTGGCACTCATCGACCGCAGCG................................................................................................................................................................................................................................................................2260.8350500000000
.................................GTGGCACTCATCGACCGCAGCGAG..............................................................................................................................................................................................................................................................2460.6740300000100
.................................GTGGCACTCATCGACCGCAG..................................................................................................................................................................................................................................................................2060.5030300000000
..........................TCTGATCGTGGCACTCATCGACC......................................................................................................................................................................................................................................................................2380.3830000000300
..........................................................................................................................................................................................................AAAGTGCAATGACGACCC...........................................................................................1830.3310100000000
.................................GTGGCACTCATCGACCGCAGC.................................................................................................................................................................................................................................................................2160.3320200000000
.........................................................................................................................................................................................................TAAAGTGCAATGACGACA............................................................................................1830.3310000100000
.................................GTGGCACTCATCGACCGCAGCGAGGA............................................................................................................................................................................................................................................................2660.1710100000000
.............................GATCGTGGCACTCATCGACCGC....................................................................................................................................................................................................................................................................2260.1710100000000
..................................TGGCACTCATCGACCGCAGCG................................................................................................................................................................................................................................................................2160.1710100000000
..........................TCTGATCGTGGCACTCATCGACCGCA...................................................................................................................................................................................................................................................................2660.1710100000000
................................CGTGGCACTCATCGACCGCAGC.................................................................................................................................................................................................................................................................2260.1710100000000
..................................TGGCACTCATCGACCGCAGCGA...............................................................................................................................................................................................................................................................2260.1710100000000
..................................TGGCACTCATCGACCGCAGCGAGG.............................................................................................................................................................................................................................................................2460.1710100000000
....................................GCACTCATCGACCGCAGCGAGGA............................................................................................................................................................................................................................................................2360.1710000001000
.................................GTGGCACTCATCGACCGCA...................................................................................................................................................................................................................................................................1960.1710100000000
.........................................................................................................................................................................................................TAAAGTGCAATGACGACAA...........................................................................................1970.1410100000000
...........................CTGATCGTGGCACTCATCGACCG.....................................................................................................................................................................................................................................................................2380.1310100000000
.............................GATCGTGGCACTCATCGACCG.....................................................................................................................................................................................................................................................................21180.0610100000000
........................................................................................................................................................................................................................ACCCT-----AAGGTGGCTGACGCG......................................................................20200.0510000001000
droPer2
GTCAGTGA---CGTGACCAAACGATATCTGATCGTGGCACTCATCGACCGCAGCGAGGAGAATGGCAAGATGACAGCGGCATAGTGGAAGCTGGTGCATGCGCGTCTTGTCGACGCACTGTTTGGGCACATGGAGGAAGAACCCGCG-GCCCCAATTCCCACTTT-CGATAGTGCTGGGTGACTCAATGGGGTTAAAATCCTAAAGTGCAATGACGACCCAACCCTAAGGTGGCTGACGCGCACGGCCTCCCA-----------------------------------------ATT---------GTGGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................CATAGTGGAAGCTGGTGCATGCG.................................................................................................................................................................................................................2321.002020000
...............................................................................CATAGTGGAAGCTGGTGCATGC..................................................................................................................................................................................................................2221.002020000
.........................................................................................................................................................................................................TAAAGTGCAATGACGACCCAAC........................................................................................2240.753030000
.................................GTGGCACTCATCGACCGCAGCGA...............................................................................................................................................................................................................................................................23180.61110110000
.........................................................................................................................................................................................................TAAAGTGCAATGACGACCC...........................................................................................1940.502020000
...................................................................................................................................................................................................................TGACGACCCAACCCTAAGGTGGC.............................................................................2330.331010000
.................................................................................................................CGCACTGTTTGGGCACATGGAGGAA.............................................................................................................................................................................2530.331010000
.........................................................................................................................................................................................................TAAAGTGCAATGACGACCCAACCCT.....................................................................................2530.331010000
.................................................................................................................CGCACTGTTTGGGCACATGGAG................................................................................................................................................................................2230.331010000
...........................................................................................................TGTCGACGCACTGTTTGGGCACAT....................................................................................................................................................................................2430.331010000
.........................................................................................................................................................................TAGTGCTGGGTGACTCAATGT.........................................................................................................................2130.331010000
...............................................................................CATAGTGGAAGCTGGTGCATGT..................................................................................................................................................................................................................2230.331010000
....................................................................................................................................................................T-CGATAGTGCTGGGTGACTCAATGGG........................................................................................................................2630.331010000
.................................................................................................................CGCACTGTTTGGGCACATGGAGG...............................................................................................................................................................................2330.331010000
..............................................................................................................................................................CCACTTT-CGATAGTGCTGGGTGAC................................................................................................................................2430.331010000
.................................GTGGCACTCATCGACCGCAGCGAG..............................................................................................................................................................................................................................................................24180.285040001
.................................GTGGCACTCATCGACCGCAGCG................................................................................................................................................................................................................................................................22180.173030000
.................................GTGGCACTCATCGACCGCAGCGAGG.............................................................................................................................................................................................................................................................25180.112020000
..........................TCTGATCGTGGCACTCATCGACAA.....................................................................................................................................................................................................................................................................24200.102200000
.................................GTGGCACTCATCGACCGCAGCGAGGA............................................................................................................................................................................................................................................................26180.061010000
.................................GTGGCACTCATCGACCGCAG..................................................................................................................................................................................................................................................................20190.051010000
.................................GTGGCACTCATCGACCGCAGC.................................................................................................................................................................................................................................................................21190.051010000
.................................GTGGCACTCATCGACCGCAGCGAGA.............................................................................................................................................................................................................................................................25190.051010000
.......................................CTCATCGACCGCAGCGAGG.............................................................................................................................................................................................................................................................19200.051010000
..................................TGGCACTCATCGACCGCAGCG................................................................................................................................................................................................................................................................21200.051010000
droWil2
C-CAGCGA---GATGGCCAGA-------TGATCGTTGCACTAATCGACCGTAGCGATGG-AACGAAAGAATTACGGCAGAGAACTGGAGTCAGGAAAAGTTCAAGTCGCTGAACGCCATTCTCATGAGGATGGC----GACCACGGGAACGTCCCCACCCACATT-TGATGGTACGCGGTAGTCTAGTGTCT----------------AGGGAAGGAGCCAAGCTGGAAGTATTGAACAGAACTAGTATTCCATCCGTACCAAAGGCCAAGGTCCTTCTTAAGCAGGTCCTTCAACT-----------GTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AT-------------------------CTGATTGTGGCGCTCATTGATAAAAGCAATTTTTCCGGCAAGATTTCACCCAGCCAATGGCAGTTGGTCGAGACCAAGCTGGTGGATGCCCTGCTCCAAAGCATGGCCAA---ACCCGACAGCATACCCGC-CCGCTT-TGACGATGCCGGTTGGCAAACTGGGGTCAAGCTTATCGGTTGCGGAGATGACC--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................TGGCAAACTGGGGTCAAGCTTATCG...........................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
........................................TCATTGATAAAAGCAATTTTTCC........................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................TTGGTCGAGACCAAGCTGGTGGATGCC..................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
droKik1
GTCAGTGA---GGTGACCAAACGACACTTGATCGTGGCCCTCATTGACAGAAGCGATAAAGCCGGCAAAATGACCGAGGCACAGTGGAAGATGGTGCATGCGCGGCTCGTTGAGTCATTGTACGCACGGATGGAGGAAGATCCCGAA-GCTCCCATGCCCACCTT-TGATGGCGCTGGGTGGCTAAATGGGGTCAAAATCCTAAAGTGCATGGATGACCCGACGAGAAAGTGGCTGACGCAAGCGGTCTGCCA-----------------------------------------GTTG---------AAGGSizeHit CountTotal NormTotal
No Reads
droFic1
GGCAGTGATAATGTGCC----CGACACTTGATTGTGGCACTCATTGACCGAGGTGATGAGAACGGCAAGATGACCGAGGCGCGGTGGAAGACAGTGTACGCGCGACTTGTGGAATCGCTGCTCGCACGGATGGATGAGGCCCTAACA-GCTCCCATGCC----------------TGGGTGGCGGAAT---GTCAAAGTCCTGAAGTGCTGGAACGACCCAACTCTGGGATGGCTGACGCAAACGGTCAGCCA-----------------------------------------ACTAATTGCTTTGTAGASizeHit CountTotal NormTotal
No Reads
droEle1
GTCAGTGA---AGTGACCAAACGACGTTTGATCGTGACCCTCATCGACCGGAGCGATTAGAAAGGGAAGAAGACGGAAGCGTGGCGAAAGACGGTGC------GACGGCTCGAAAACTTCTTCGCGCGGATGGAGGAAGATCGCAAC-ACCCTCACGCAAATATT-CGATGGTGCAGAGTCGCTGAACGTGGTAAAAATCTTCAAATGTAACGACGAGCCTACCTTGAAGTGGCAGACGCAAACGGTCCGCCA-----------------------------------------GATGGAAGCTTTGTGGGSizeHit CountTotal NormTotal
No Reads
droBia1
GTC------------GTCAACCGACACATAATCGTGGCAATCATTGACAGGGACGACGAGAATGGGAAGATGATGGAGGCGTCCTTAAAGATCGTTCATGCGCGCCTCGTTTAGTCTCTCTTTGCACCGATAGAAGAGGCACCCACA-GCCCACAT--------TGGGCTGGTGCAGGGTAGTTGAACGGTGTCAAAATCCTGAAGTGCAACGACGATTCGACCAAG-------------AAACGGTATGCCA-----------------------------------------ACTAGAAGCGTTGTGGGSizeHit CountTotal NormTotal
No Reads
droTak1
-TCAGTGA---TGTAGTCAACCGACACCTGATCGCGGCACTCATTGACAGGAACGACGAAAATGGGAAGATGACGGAGGCGCGCTGGAAGATCGTCCATGCGCGACTGATCGAGTCTCTCTTTGCACGGATGGATGAATCACCCACAAGCCCCCATGCCCACATT-CGATGGTGCAGGGTGGTTGAACGGCGTGAAAATCCTGAAGTGCAACGACGATCCGACCAGGAAGTGGCTGACGCAAACGGTCTGCCA-----------------------------------------ACTG-------------SizeHit CountTotal NormTotal
No Reads
droYak3
G----TGA---GGCGACCAAACGAAACTTGATCGTGGCACTCATCGACAGAAGCGATGAAGCCGACAAGATGACCGAGCCGCGGTGGAAGTTGGTGCATGCGCGACTCGTTGAGTCATTGTTTGCACGGATGGAGGAAGCTCCTGAG-GCCCCCATGCCCACTTT-TGATGGTGCCGGGTGGCTGAACGGGGTCAAAATCCCGAAGTGCATGGATGACCCGACGAGAAAGTGGCTGACGCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCGTTGTGGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGG.........23121.4217017000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGGC........24111.3615014100000000
.....................CGAAACTTGATCGTGGCACTCA............................................................................................................................................................................................................................................................................2211.00101000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAG..........22120.9211011000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCG.......25110.55606000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCGT......26110.36402000020000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGA...........21140.29404000000000
..........................................................................................................................TGCACGGATGGAGGAAGCTCCTGAG-G..................................................................................................................................................................2660.17101000000000
........................................................................................................................TTTGCACGGATGGAGGAAGCTCC........................................................................................................................................................................2360.17101000000000
..............................................................................................................................................................................................................TGCATGGATGACCCGACGAGAAAGT................................................................................2570.14101000000000
..............................................................................................................TGAGTCATTGTTTGCACGGATGGAGGA..............................................................................................................................................................................2770.14101000000000
................................................................................................................AGTCATTGTTTGCACGGATGGAGGA..............................................................................................................................................................................2570.14101000000000
................................................................................................................AGTCATTGTTTGCACGGATGGAGG...............................................................................................................................................................................2470.14101000000000
................................................................................................................AGTCATTGTTTGCACGGATGGAGGAA.............................................................................................................................................................................2670.14101000000000
................................................................................................................AGTCATTGTTTGCACGGATGGAG................................................................................................................................................................................2380.13101000000000
.................................................................................................................GTCATTGTTTGCACGGATGGA.................................................................................................................................................................................2180.13101000000000
..............................................................................................................................CGGATGGAGGAAGCTCCTGAG-GCCCC..............................................................................................................................................................2680.13101000000000
................................................................................................................AGTCATTGTTTGCACGGATGG..................................................................................................................................................................................2190.11101000000000
.............................................................................................................................................................................................................................................CGCAAACGGTCTGCCA-----------------------------------------ATTGGAGGC........25100.10101000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCGTT.....27110.09100000010000
...............................................................................................................................................................................................................................................CAAACGGTCTGCCA-----------------------------------------ATTGGAGGCG.......24110.09101000000000
...............................................................................................................................................................................................................................................CAAACGGTCTGCCA-----------------------------------------ATTGGAGGCGA......25110.09101000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCGTTG....28110.09100000010000
...............................................................................................................................................................................................................................................CAAACGGTCTGCCA-----------------------------------------ATTGGAG..........21120.08101000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATTGGAGGCA.......25130.08101000000000
..........................................................................................................................................................................................................................................TGACGCAAACGGTCTGCCA-----------------------------------------ATTGGA...........25130.08101000000000
..........................................................................................................................................................................................................................................TGACGCAAACGGTCTGCCA-----------------------------------------ATT..............22150.07101000000000
..............................................................................................................................................................................................................................................GCAAACGGTCTGCCA-----------------------------------------ATT..............18160.06101000000000
...............................................................................................................................................................................................................................................CAAACGGTCTGCCA-----------------------------------------ATTGGATT.........22160.06101000000000

Generated: 05/18/2015 at 03:00 AM