ID:

dps_2103

 Coordinate:

Unknown_group_6:45954-46104 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-59.9 -59.9 -59.9

Flybase annnotation

CDS [Dpse\GA24023-cds]; exon [dpse_GLEANR_13585:1]; intron [Dpse\GA24023-in]; Antisense to intron [Dpse\GA24014-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAGAAGTTCGAGGAGAACGGAGGACCACCGCCCAAGTGTGAGGACGCTGGGTGGCACCAAGGCAGAGTGAAAGCCATCGCCTGCCAAGATGCTCCCTCGGCGGCCCTCTAAAATGGGAGGACATTCCCAGCAAACTAAGGGCCAGACTATGGACTATGGCTACAAAAAGGTAGTCATAGTCCGTACAAATCTGAATCAAGGGGCACGCAGCCGGAAGTCGAGCCATACCTGGAGCCCCATGAGGCCCCGAG
**************************************************..((((....(((((.((((......)))))))))....))))...((((.((((((......((((((....))))))........))))))....((((((((((((((((......)))))))))))))))).....)))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 M040
female body
 GSM444067
head
 M062
head
 GSM343916
embryo
 M059
embryo
 SRR902011
testis
 SRR902010
ovaries
.........................................................................................................................................................................................................................TCGAGCCTCACCTGGAGCACCA............ 22 3 5 131.60 658 356 228 29 25 6 14 0 0
..........................................................................................................................................................................................................................CGAGCCTCACCTGGAGCACCA............ 21 3 10 63.30 633 458 97 36 24 8 6 4 0
.........................................................................................................................................................................................................................TCGAGCCTTACCTGGAGCACCA............ 22 2 1 2.00 2 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................CGAGCCTCACCTGGAGCCCCA............ 21 2 1 1.00 1 0 0 0 0 1 0 0 0
..............................................................CAGAGTGAAAGCCATCGCCTGC....................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................GAGCCTTACCTGGAGCACC............. 19 2 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................GAGCCTCACCTGGAGCCCCA............ 20 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................TGCTCGCTCGGCGGCCCTCTAAAA.......................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGAGCCCCACCTGGAGCACCA............ 21 3 8 0.50 4 3 1 0 0 0 0 0 0
...................................................................TGAAAGCCATCGCCTGCCAAGATG................................................................................................................................................................ 24 0 8 0.38 3 0 3 0 0 0 0 0 0
...................................................TGGCACCAAGGCAGAGTGAAAGC................................................................................................................................................................................. 23 0 3 0.33 1 0 1 0 0 0 0 0 0
......................................................CACCAAGGCAGAGTGAAAG.................................................................................................................................................................................. 19 0 3 0.33 1 0 1 0 0 0 0 0 0
.......................................................................AGCCATCGCCTGCCAAGATGC............................................................................................................................................................... 21 0 10 0.30 3 0 1 1 1 0 0 0 0
...................................................................TGAAAGCCATCGCCTGCCAAG................................................................................................................................................................... 21 0 20 0.20 4 0 4 0 0 0 0 0 0
.........................CACCGCCCAAGTGTGAGGACG............................................................................................................................................................................................................. 21 0 15 0.20 3 0 3 0 0 0 0 0 0
................................................................................................................................................................TACAAAAAGGTAGCCACAGTG...................................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0 0
...................GAGGACCACCGCCCAAGTGTGAGG................................................................................................................................................................................................................ 24 0 14 0.14 2 0 2 0 0 0 0 0 0
...................GAGGATCACCGCCCAAGTGTGAGGA............................................................................................................................................................................................................... 25 1 14 0.14 2 0 2 0 0 0 0 0 0
...................................................................TGAAAGCCATCGCCTGCCAAGATGC............................................................................................................................................................... 25 0 8 0.13 1 0 1 0 0 0 0 0 0
...................................................................TGAAAGCCATCGCCTGCCAAGGTGC............................................................................................................................................................... 25 1 8 0.13 1 0 1 0 0 0 0 0 0
...................................................................................................................................................TATAGACTATTGCTACAAATA................................................................................... 21 3 9 0.11 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................CCTGAAGTGGAGCCGTACCTG.................... 21 3 9 0.11 1 0 1 0 0 0 0 0 0
......TTCGAGGAGCACAGGGGACC................................................................................................................................................................................................................................. 20 3 9 0.11 1 1 0 0 0 0 0 0 0
....................................................................GAAGGCCATCGCCTGCCAAGATGC............................................................................................................................................................... 24 1 9 0.11 1 0 1 0 0 0 0 0 0
........CGAGGAGAATGGAGGACCTCCGCCC.......................................................................................................................................................................................................................... 25 2 9 0.11 1 0 1 0 0 0 0 0 0
...................................................................TGAAAGCCATCGCCTGCCAAGT.................................................................................................................................................................. 22 1 20 0.10 2 0 2 0 0 0 0 0 0
..................................................................GTGAAAGCCATCGCCTGCCAA.................................................................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0
.....................................................................AAAGCCATCGCCTGCCAAGA.................................................................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 0 2
..............................................TTGGGTGGCACCAAGGCAGG......................................................................................................................................................................................... 20 2 12 0.08 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................GAGCCTCACCTGGAGCCTCA............ 20 3 13 0.08 1 0 0 0 0 1 0 0 0
.......................ACCACCGCCCAAGTGTGAGGACG............................................................................................................................................................................................................. 23 0 14 0.07 1 0 1 0 0 0 0 0 0
.....................GGACCACCGCCCAAGTGTGAGGAC.............................................................................................................................................................................................................. 24 0 14 0.07 1 0 0 0 0 0 1 0 0
........................CCACCGCCCAAGTGTGAGGACGC............................................................................................................................................................................................................ 23 0 15 0.07 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................TGGACTACGGCTACAAAAAG.................................................................................. 20 1 17 0.06 1 0 0 0 0 0 0 0 1
.....................................................................................................................................................TGGACTACGGCTACAAAAAGG................................................................................. 21 1 17 0.06 1 0 0 0 0 0 0 1 0
.....................................................................................................................................................TGGACTACGGCTACAAAA.................................................................................... 18 1 19 0.05 1 0 0 0 0 0 0 0 1
...................................................................TGAAAGCCATCGCCTGCCAAGA.................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................GTGAAAGCCATCGCCTGCCA..................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0
....................................................................GAAAGCCATCGCCTGCCAAG................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0
................................CAAGTGTGAGGACGCAGGGTG...................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0
...............................................................................CCTACGAAGATGTTCCCTC......................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................TGGACTACGGCTAAAAAAAG.................................................................................. 20 2 20 0.05 1 0 0 0 0 0 0 0 1
.....................................................................................................................................................TGGACTACGGCTAAAAAAAGG................................................................................. 21 2 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTCTTCAAGCTCCTCTTGCCTCCTGGTGGCGGGTTCACACTCCTGCGACCCACCGTGGTTCCGTCTCACTTTCGGTAGCGGACGGTTCTACGAGGGAGCCGCCGGGAGATTTTACCCTCCTGTAAGGGTCGTTTGATTCCCGGTCTGATACCTGATACCGATGTTTTTCCATCAGTATCAGGCATGTTTAGACTTAGTTCCCCGTGCGTCGGCCTTCAGCTCGGTATGGACCTCGGGGTACTCCGGGGCTC
**************************************************..((((....(((((.((((......)))))))))....))))...((((.((((((......((((((....))))))........))))))....((((((((((((((((......)))))))))))))))).....)))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM444067
head
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 M062
head
 SRR902010
ovaries
................................................CCCACCGTGGTTCCGTCTCACTTT................................................................................................................................................................................... 24 0 3 4.33 13 12 1 0 0 0 0 0 0
..................CCTCCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 23 0 11 3.36 37 35 1 0 0 0 0 0 1
..................CCTCCTGGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 26 0 11 2.00 22 22 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 22 0 14 2.00 28 28 0 0 0 0 0 0 0
..................CCTCCTGGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 26 1 11 1.45 16 15 1 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 20 0 14 1.21 17 17 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 23 0 14 1.14 16 16 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 25 0 14 1.07 15 15 0 0 0 0 0 0 0
......................CTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 19 0 14 1.00 14 14 0 0 0 0 0 0 0
.............................................CGACCCACCGTGGTTCCGTCTCACTTT................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................CCACCGTGGTTCCGTCTCACTTT................................................................................................................................................................................... 23 0 3 1.00 3 3 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACACTCCTCGTA........................................................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0
...................CTCCTGGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 25 1 14 0.71 10 9 0 0 0 0 1 0 0
....................TCCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 21 0 14 0.64 9 7 0 2 0 0 0 0 0
.........................................................................GGTAGCGGACGGTTCTAC................................................................................................................................................................ 18 0 10 0.60 6 5 0 1 0 0 0 0 0
....................TCCTGGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 24 0 14 0.57 8 8 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACAC................................................................................................................................................................................................................... 19 0 14 0.57 8 8 0 0 0 0 0 0 0
..................CCTCCTGGTGGCAGGTTCACACT.................................................................................................................................................................................................................. 23 1 11 0.55 6 6 0 0 0 0 0 0 0
................................................CCCACCGTGGTTCCGTCTCACTT.................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0 0
........................GGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 20 0 15 0.47 7 6 0 1 0 0 0 0 0
..................................................................CACTTTCGGTAGCGGACGGTT.................................................................................................................................................................... 21 0 20 0.45 9 9 0 0 0 0 0 0 0
....................TCCTGGTGGCGGGTTCACAC................................................................................................................................................................................................................... 20 0 14 0.43 6 5 0 0 0 0 0 1 0
......................CTGGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 22 0 14 0.43 6 6 0 0 0 0 0 0 0
........................................................................CGGTAGCGGACGGTTCTACG............................................................................................................................................................... 20 0 10 0.40 4 4 0 0 0 0 0 0 0
..................CCTCCTGGTGGCAGGTTCACAC................................................................................................................................................................................................................... 22 1 11 0.36 4 4 0 0 0 0 0 0 0
...................CTCCTGGTGGCAGGTTCACACT.................................................................................................................................................................................................................. 22 1 14 0.36 5 5 0 0 0 0 0 0 0
...................................................ACCGTGGTTCCGTCTCACTTTC.................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................ACCGTGGTTCCGTCTCACTTTCGGT............................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0
..................................................CACCGTGGTTCCGTCTCACTTT................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................GGTAGCGGACGGTTCTACGAG............................................................................................................................................................. 21 0 10 0.30 3 3 0 0 0 0 0 0 0
.......................................................................TCGGTAGCGGACGGTTCTAC................................................................................................................................................................ 20 0 10 0.30 3 3 0 0 0 0 0 0 0
.......................TGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 18 0 14 0.29 4 4 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACACTC................................................................................................................................................................................................................. 21 0 14 0.29 4 3 0 0 0 0 0 1 0
.......................TGGTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 21 0 14 0.29 4 3 0 0 1 0 0 0 0
....................TCCTGGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 24 1 14 0.29 4 4 0 0 0 0 0 0 0
....................TCCTGGTGGCAGGTTCACACT.................................................................................................................................................................................................................. 21 1 14 0.29 4 4 0 0 0 0 0 0 0
......................................................................TTCGGTAGCGGACGGTTCTA................................................................................................................................................................. 20 0 11 0.27 3 1 0 1 1 0 0 0 0
.........................GTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 19 0 15 0.27 4 4 0 0 0 0 0 0 0
..................................................................CACTTTCGGTAGCGGACGGTTCTACG............................................................................................................................................................... 26 0 8 0.25 2 2 0 0 0 0 0 0 0
..................................................CACCGTGGTTCCGTCTCACT..................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
..................................................CACCGTGGTTCCGTCTCACTT.................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
....................TCCTGGTGGCGGGTTCACA.................................................................................................................................................................................................................... 19 0 14 0.21 3 3 0 0 0 0 0 0 0
......................CTGGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 22 1 14 0.21 3 3 0 0 0 0 0 0 0
........................GGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 20 1 15 0.20 3 3 0 0 0 0 0 0 0
........................................................................CGGTAGCGGACGGTTCTAC................................................................................................................................................................ 19 0 10 0.20 2 1 0 0 0 0 1 0 0
........................GGTGGCGGGTTCACACTCCTG.............................................................................................................................................................................................................. 21 0 15 0.20 3 3 0 0 0 0 0 0 0
.........................................................................GGTAGCGGACGGTTCTACGA.............................................................................................................................................................. 20 0 10 0.20 2 2 0 0 0 0 0 0 0
.......................ATGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 21 3 18 0.17 3 3 0 0 0 0 0 0 0
....................AAATGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 21 3 18 0.17 3 3 0 0 0 0 0 0 0
............................................................................................AGGGAGCAACTGGGAGATTT........................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0 0 0
..................CCTCCTGGTGGCGGGTTCAC..................................................................................................................................................................................................................... 20 0 12 0.17 2 2 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCACAC................................................................................................................................................................................................................... 21 0 14 0.14 2 1 0 0 0 0 0 1 0
.......................TGGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 21 1 14 0.14 2 2 0 0 0 0 0 0 0
.....................CCTGGTGGCAGGTTCACACT.................................................................................................................................................................................................................. 20 1 14 0.14 2 2 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACACTCC................................................................................................................................................................................................................ 22 0 14 0.14 2 2 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCAC..................................................................................................................................................................................................................... 19 0 15 0.13 2 1 0 1 0 0 0 0 0
........................GGTGGCGGGTTCACACTC................................................................................................................................................................................................................. 18 0 15 0.13 2 1 0 0 0 0 0 1 0
.....................CCTCCTGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 23 2 16 0.13 2 2 0 0 0 0 0 0 0
....................................................................CTTTCGGTAGCGGACGGTTCTAC................................................................................................................................................................ 23 0 8 0.13 1 1 0 0 0 0 0 0 0
................................................................CACACTTTCGGTAGCGGACGTT..................................................................................................................................................................... 22 2 8 0.13 1 0 1 0 0 0 0 0 0
..................................................................AACTTTCGGTAGCGGACGGTTCCAC................................................................................................................................................................ 25 2 9 0.11 1 0 1 0 0 0 0 0 0
............................................GCGACCCACCGTGGTTCCGTCCCACTTT................................................................................................................................................................................... 28 1 9 0.11 1 1 0 0 0 0 0 0 0
..................................................................CACTTTCGGTAGCGGACGGT..................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................TACTTTCGGTAGCGGACGGTTCCA................................................................................................................................................................. 24 2 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................GTAGCGGACGGTTCTACGA.............................................................................................................................................................. 19 0 10 0.10 1 0 0 0 1 0 0 0 0
................................................................................GACGGTTCTGCAAGGGAAC........................................................................................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0 0 0
......................................................................TTCGGTAGCGGACGGTTCTACGAG............................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0 0
..................................................................CACTTTCGGTAGCGGACGGTTCCA................................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
......................................................................TTCGGTAGCGGACGGTTCTACGA.............................................................................................................................................................. 23 0 10 0.10 1 1 0 0 0 0 0 0 0
......................................................................TTCGGTAGCGGACGGTTCTAC................................................................................................................................................................ 21 0 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................CGGTAGCGGACGGTTCTACGA.............................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................................GGTAGCGGACGGTTCTACG............................................................................................................................................................... 19 0 10 0.10 1 0 0 0 1 0 0 0 0
..........................................................................GTAGCGGACGGTTCTACGAG............................................................................................................................................................. 20 0 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................TCGGTAGCGGACGGTTCTACG............................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0
......................................................................TTCGGTAGCGGACGGTTCCAC................................................................................................................................................................ 21 1 11 0.09 1 1 0 0 0 0 0 0 0
..................CCTCCTGGAGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................................GGTAGCGGACGGTTCCACGAG............................................................................................................................................................. 21 1 11 0.09 1 1 0 0 0 0 0 0 0
..................CCTTCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 23 1 11 0.09 1 1 0 0 0 0 0 0 0
.......................................................................TCGGTAGCGGACGGTTCTA................................................................................................................................................................. 19 0 11 0.09 1 1 0 0 0 0 0 0 0
..................CCTCCTGGTGGCAGGTTCACA.................................................................................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0
..........................................................................GTAGCGGACGGTTCTACGAGT............................................................................................................................................................ 21 1 11 0.09 1 0 0 1 0 0 0 0 0
.................TCCTCCTGGTGGCGGGTTCA...................................................................................................................................................................................................................... 20 1 12 0.08 1 1 0 0 0 0 0 0 0
.......................................................................TCGGTAGCGGACGGTTCCAC................................................................................................................................................................ 20 1 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................CGGTAGCGGACGGTTCCAC................................................................................................................................................................ 19 1 12 0.08 1 1 0 0 0 0 0 0 0
.....................TCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 20 1 14 0.07 1 1 0 0 0 0 0 0 0
...................ATCCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 22 1 14 0.07 1 1 0 0 0 0 0 0 0
....................TCCTGGTGGCGGGTTCACACTCC................................................................................................................................................................................................................ 23 0 14 0.07 1 1 0 0 0 0 0 0 0
.....................CCTGGTGGCAGGTTCACACTCC................................................................................................................................................................................................................ 22 1 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGAGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTAGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 22 1 14 0.07 1 1 0 0 0 0 0 0 0
.....................CCTGGTGGCAGGTTCACACTC................................................................................................................................................................................................................. 21 1 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGTGGCAGGTTCACAC................................................................................................................................................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCACACTCCTGC............................................................................................................................................................................................................. 27 0 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCACATTCCT............................................................................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0 0 0 0
...................TTCCTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 22 1 14 0.07 1 0 0 0 0 0 1 0 0
...................CTCCTGGTGGCGGGTTCACACTCC................................................................................................................................................................................................................ 24 0 14 0.07 1 1 0 0 0 0 0 0 0
.......................TGGAGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0 0 0
.....................CCTGGTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 23 1 14 0.07 1 1 0 0 0 0 0 0 0
...................TTTCTGGTGGCAGGTTCACACT.................................................................................................................................................................................................................. 22 3 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCACACTC................................................................................................................................................................................................................. 23 0 14 0.07 1 1 0 0 0 0 0 0 0
......................CTGGTGGCGGGTTCACACTC................................................................................................................................................................................................................. 20 0 14 0.07 1 1 0 0 0 0 0 0 0
....................TCCTGGTGGCGGGTTCACACTCCTC.............................................................................................................................................................................................................. 25 1 14 0.07 1 1 0 0 0 0 0 0 0
......................................................................TTTGGTAGCGGACGGTTCTA................................................................................................................................................................. 20 1 14 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGGGGCGGGTTCACA.................................................................................................................................................................................................................... 20 1 14 0.07 1 0 0 0 0 0 0 0 1
..................TTTCCTGGTGGCAGGTTCACACT.................................................................................................................................................................................................................. 23 3 15 0.07 1 1 0 0 0 0 0 0 0
..........................TGGCGGGTTCACACTCCT............................................................................................................................................................................................................... 18 0 15 0.07 1 1 0 0 0 0 0 0 0
.........................GTGGCAGGTTCACACTCCT............................................................................................................................................................................................................... 19 1 15 0.07 1 1 0 0 0 0 0 0 0
.........................GTGGCGGGTTCACACTCCTG.............................................................................................................................................................................................................. 20 0 15 0.07 1 1 0 0 0 0 0 0 0
...................CTCCTGGTGGCGGGTTCA...................................................................................................................................................................................................................... 18 0 15 0.07 1 1 0 0 0 0 0 0 0
........................GGTGGCAGGTTCACACTCCTG.............................................................................................................................................................................................................. 21 1 15 0.07 1 0 1 0 0 0 0 0 0
.........................GTGGCGGGTTCACACTCCTGC............................................................................................................................................................................................................. 21 0 15 0.07 1 1 0 0 0 0 0 0 0
.....................ATTGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 20 2 15 0.07 1 1 0 0 0 0 0 0 0
......................ATGGTGGCGGGTTCACACT.................................................................................................................................................................................................................. 19 1 15 0.07 1 1 0 0 0 0 0 0 0
...................TTCATGGTGGCGGGTTCA...................................................................................................................................................................................................................... 18 2 15 0.07 1 1 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCACA.................................................................................................................................................................................................................... 18 0 15 0.07 1 1 0 0 0 0 0 0 0
.......................TGGTGGCGGGTTCACACTCCTA.............................................................................................................................................................................................................. 22 1 15 0.07 1 1 0 0 0 0 0 0 0
.....................CCTGGTGGCGGGTTCGCA.................................................................................................................................................................................................................... 18 1 16 0.06 1 0 0 1 0 0 0 0 0
....................ACCTCCTGGCGGGTTCACACT.................................................................................................................................................................................................................. 21 3 17 0.06 1 1 0 0 0 0 0 0 0
..................................................................CACTTTCGGTAGCGGACCGT..................................................................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................ACTTTCGGTAGCGGACGGTTC................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................TTTCGGTAGCGGACGGTTCT.................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................TTTCGGTAGCGGACGGTTC................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CACTTTCGGTAGCGGGCGGTT.................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................ACTTTCGGTAGCGGACGGTT.................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................AACTTTCGGTAGCGGACGGTCCT.................................................................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0 0 0 0
...................TTCCTGGTGGCGGGTTCGC..................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 1 0 0 0 0 0
......................CATGTGGCAGGTTCACACTC................................................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................ATGGTAGCGGACGGTTCCA................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0
......................................................................TTCGGTAGCGGACGGTTC................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_6:45904-46154 + dps_2103 CAGAAGT--TCGAGGAGAACG---------GAGGACCACCGCCCAAGTGTGAGGACGCTGGGTGGC------------------ACCAAGGCAGAGTGAAAGCCATCG--------------------CCTGCCAAGATGCTCCCTCGGCGGCCCTCTAAAATGGGAGGACAT-----TC------------------------------------------------------------CCAGCAAACTAAGGGCCAGACTATGGACTATGGCTACAAAAAGGTAGTCAT-AGTCCGTACAAATCTGAATCAAGGGGCACGCAGCC-------------------GGAAGTCGAGCCATACCTGGAGCCCCATGAGGCCCCGAG-----------
droPer2 scaffold_43:216108-216358 + CAGAAGT--TCGAGGAGAACG---------GAGGACCACCGCCCAAGTGTGAGGACGCCGGGTGGC------------------ACCAAGGCAGAGTGAAAGCCATCG--------------------CCTGCCAAGATGCTCCCTCGGCGGCCCTCTAAAATGGGAGGACAT-----TC------------------------------------------------------------CCAGCAAACTAAGGGCCAGACTATGGACTATGGCTACAAAAAGGTAGTCAT-AGTCCGTACAAATCTGAATCAAGGGGCACGCAGCC-------------------GGAAGTCGAGCCATACCTGGAGCCCCATGAGGCCCCGAG-----------
droGri2 scaffold_15116:176672-176797 - CTGAT-----TACGAGAGAAC---------CCGGCCCACCACCAGTATGTAAAGATGTTGGTTGGT------------------ATCAAGGGAATAACAAAGTCATTG--------------------CCTGTGACGATGTACGTTCCGTGGAGCTATATAG--GGCAGCCAT-----AG------------------------------------------------------------CAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13245:3508-3779 + GAGGAGA--TGCTCAAGAGCG---------GAGGACCTCCACCGGACTGCGAAGACGGTGG-----------------------ACCAGGGTAGCATCAAGGTGATAG--------------------CGTGCCAAGATGCGAGGTCTGTAAACCTCTACAA--GCGAATGAT-----TGCGTCGCTTGGGGAGGTCTACCCAGGAGCCAGACTGGAGGCGGTGGACTCGGACAAGATCCCCAGCAAACCGAGGGCCCGCGTATGGCTGACAG--------------------------------------GAGAGGATCTACAGTCGGATGCGAAGAGTAAACCTGGAGGCATCGA--------------CTTGAAGATGGACG-----------
droBip1 scf7180000391950:1841-2128 - TGGGCGT--TCGTGGAGGAGA---------CCAGCCGACCCTAAAACCATCCTGACGATGCTTAGGGTGTGCAATCCGACGCTTCCTACGGCGGACTGGAAAGTCGCCAAGGTCAAGGAGGCGGTAGGACTGCGGAGGCA---GGTCGTCCTCACTCTCAACGAGGAGAACGTGAATGTC------------------------------------------------------------CTGGAAAAGTCAGAGC-ACCGGATCAAATACGGATTCGAGCACGTGACGGTCCGTATCTACAAATCTGATGTGAAGAGCA--GAACC-------------------GGAAATATCGAGCTGAAGGAAGATGCACAAGAGCCAGA------------
droEle1 scf7180000490380:95830-95972 - CAG--------------------------------CCAACACCATGCTGCAAGGACGCAGGGTGGT------------------TTTAAGGCAGCATCAAAGTGGTGG--------------------CCTGCGATAGTCAGCGGTCGGCGAGGTT-----------------------------------------TACAAAGGGGC------------GCTGGATTGGCGTGACGT----------------------------------------------------------------------------------------------------------------------------------CCCCATTAGGCCCCGAGCGAGGATCTGG
droRho1 scf7180000777935:4114-4269 - CGTATGG--TACGCGAGAAGC---------CCGGTTCATCGCCTTGCTGTATGGACGCGGGCTGGT------------------ACCAGGGCAGTGTAAAAGTGGTGG--------------------CCTGCGATAATCAGCGATCAGCTGACCTGTACAA--ACATTCGGT-----AGCACAGCTCGGAGCAGCTTACGAAGGGGCGA-------------------------------------------------AC---------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302238:14189-14281 - CAGAAAT--ACGTGGTGGGCTGTGGTGAGTCAGGTTCACCGCCCAGCTGCGTGGACGCCGGCTGGT------------------ATTATGGCAGTGTCAAAGTGGTGG--------------------CCTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413338:282-442 - TGAAAGTGCTGGACGAAAACC---------CAGGACCACCACCTGACTGCACAGATGCAGGGTGGT------------------ACCAGGGCAACGTAAAGTTGATCG--------------------CCTGTGAGGACGAGAGATCGGCAGCGCTCTACAA--GGCTGCCAT-----TACCAAAGTTGGCAAGGTCAACCCCGGGGCCA------------------------------------------------AGCTA-------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:71976-72089 + CTGAAATGCTAGCCGAAGAAC---------CTGGACC-CCTTCTGTCTGCAAAGACGTGGGATGGT------------------TCCAAGGCGGCGTCAAGGTGATCG--------------------CCTGTAACGATGAATGCTATGCGGAGCTGTACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAGAAGT--TCGAGGAGAACG---------GAGGACCACCGCCCAAGTGTGAGGACGCTGGGTGGC------------------ACCAAGGCAGAGTGAAAGCCATCG--------------------CCTGCCAAGATGCTCCCTCGGCGGCCCTCTAAAATGGGAGGACAT-----TC------------------------------------------------------------CCAGCAAACTAAGGGCCAGACTATGGACTATGGCTACAAAAAGGTAGTCAT-AGTCCGTACAAATCTGAATCAAGGGGCACGCAGCC-------------------GGAAGTCGAGCCATACCTGGAGCCCCATGAGGCCCCGAG-----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................CAGAGTGAAAGCCATCG--------------------CCTGC.......................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAGATG................................................................................................................................................................................................................................................................2480.3830300000000
..............................................................TGGC------------------ACCAAGGCAGAGTGAAAGC.....................................................................................................................................................................................................................................................................................................2330.3310100000000
.................................................................C------------------ACCAAGGCAGAGTGAAAG......................................................................................................................................................................................................................................................................................................1930.3310100000000
....................................................................................................AGCCATCG--------------------CCTGCCAAGATGC...............................................................................................................................................................................................................................................................21100.3030101010000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAG...................................................................................................................................................................................................................................................................21200.2040400000000
....................................CACCGCCCAAGTGTGAGGACG...................................................................................................................................................................................................................................................................................................................................................21150.2030300000000
..............................GAGGACCACCGCCCAAGTGTGAGG......................................................................................................................................................................................................................................................................................................................................................24140.1420200000000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAGATGC...............................................................................................................................................................................................................................................................2580.1310100000000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAGT..................................................................................................................................................................................................................................................................22200.1020200000000
...............................................................................................GTGAAAGCCATCG--------------------CCTGCCAA....................................................................................................................................................................................................................................................................21200.1020200000000
..................................................................................................AAAGCCATCG--------------------CCTGCCAAGA..................................................................................................................................................................................................................................................................20200.1020000000200
..................................ACCACCGCCCAAGTGTGAGGACG...................................................................................................................................................................................................................................................................................................................................................23140.0710100000000
................................GGACCACCGCCCAAGTGTGAGGAC....................................................................................................................................................................................................................................................................................................................................................24140.0710010000000
...................................CCACCGCCCAAGTGTGAGGACGC..................................................................................................................................................................................................................................................................................................................................................23150.0710100000000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAGA..................................................................................................................................................................................................................................................................22200.0510100000000
...............................................................................................GTGAAAGCCATCG--------------------CCTGCCA.....................................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................GAAAGCCATCG--------------------CCTGCCAAG...................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
CAGAAGT--TCGAGGAGAACG---------GAGGACCACCGCCCAAGTGTGAGGACGCCGGGTGGC------------------ACCAAGGCAGAGTGAAAGCCATCG--------------------CCTGCCAAGATGCTCCCTCGGCGGCCCTCTAAAATGGGAGGACAT-----TC------------------------------------------------------------CCAGCAAACTAAGGGCCAGACTATGGACTATGGCTACAAAAAGGTAGTCAT-AGTCCGTACAAATCTGAATCAAGGGGCACGCAGCC-------------------GGAAGTCGAGCCATACCTGGAGCCCCATGAGGCCCCGAG-----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................ACCGCCCAAGTGTGAGGACGCCGG...............................................................................................................................................................................................................................................................................................................................................24200.153030000
...............................................TGTGAGGACGCCGGGTGG...........................................................................................................................................................................................................................................................................................................................................18200.102020000
...............................................TGTGAGGACGCCGGGTGGC------------------A.......................................................................................................................................................................................................................................................................................................................20200.102020000
.............................................AGTGTGAGGACGCCGGGTGGC------------------........................................................................................................................................................................................................................................................................................................................21200.102020000
......................................CCGCCCAAGTGTGAGGACGCCGGG..............................................................................................................................................................................................................................................................................................................................................24200.051010000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAGATGCT..............................................................................................................................................................................................................................................................26200.051010000
....................................................................................................AGCCATCG--------------------CCTGCCAAGATGC...............................................................................................................................................................................................................................................................21200.051010000
..................................................GAGGACGCCGGGTGGC------------------ACCAAGGC................................................................................................................................................................................................................................................................................................................24200.051010000
...............................................TGTGAGGACGCCGGGTGGC------------------ACA.....................................................................................................................................................................................................................................................................................................................22200.051001000
..........................................CCAAGTGTGAGGACGCCGGGTGGC------------------........................................................................................................................................................................................................................................................................................................................24200.051010000
......................................CCGCCCAAGTGTGAGGACGC..................................................................................................................................................................................................................................................................................................................................................20200.051010000
..........................................CCAAGTGTGAGGACGCCGG...............................................................................................................................................................................................................................................................................................................................................19200.051010000
................................................................................................TGAAAGCCATCG--------------------CCTGCCAAGATGCTC.............................................................................................................................................................................................................................................................27200.051010000
.....................................ACCGCCCAAGTGTGAGGACGCC.................................................................................................................................................................................................................................................................................................................................................22200.051010000
..........................................CCAAGTGTGAGGACGCCGGGTGG...........................................................................................................................................................................................................................................................................................................................................23200.051010000
...........................................CAAGTGTGAGGACGCCGGGTGGC------------------........................................................................................................................................................................................................................................................................................................................23200.051010000
...............................................TGTGAGGACGCCGGGTGGC------------------ACCAAGG.................................................................................................................................................................................................................................................................................................................26200.051010000
...............................................TGTGAGGACGCCGGGTGGC------------------AA......................................................................................................................................................................................................................................................................................................................21200.051010000
..........................................CCAAGTGTGAGGACGCCGGGT.............................................................................................................................................................................................................................................................................................................................................21200.051010000
.................................................................................................GAAAGCCATCG--------------------CCTGCCAAGATGCTT.............................................................................................................................................................................................................................................................26200.051010000
.........................................CCCAAGTGTGAGGACGCCGGGT.............................................................................................................................................................................................................................................................................................................................................22200.051010000
...........................................CAAGTGTGAGGACGCCGGGTGG...........................................................................................................................................................................................................................................................................................................................................22200.051010000
...........................................CAAGTGTGAGGACGCCGGG..............................................................................................................................................................................................................................................................................................................................................19200.051000001
..................................ACCACCGCCCAAGTGTGAGGACGCCGG...............................................................................................................................................................................................................................................................................................................................................27200.051010000
............................................AAGTGTGAGGACGCCGGGTGG...........................................................................................................................................................................................................................................................................................................................................21200.051010000
................................................GTGAGGACGCCGGGTGGC------------------AT......................................................................................................................................................................................................................................................................................................................20200.051010000
...............................................TGTGAGGACGCCGGGTGGC------------------........................................................................................................................................................................................................................................................................................................................19200.051001000
.......................................CGCCCAAGTGTGAGGACGCC.................................................................................................................................................................................................................................................................................................................................................20200.051010000
.........................................CCCAAGTGTGAGGACGCCGGGTGGC------------------AC......................................................................................................................................................................................................................................................................................................................27200.051001000
.......................................CGCCCAAGTGTGAGGACGCCGGG..............................................................................................................................................................................................................................................................................................................................................23200.051010000
droGri2
CTGAT-----TACGAGAGAAC---------CCGGCCCACCACCAGTATGTAAAGATGTTGGTTGGT------------------ATCAAGGGAATAACAAAGTCATTG--------------------CCTGTGACGATGTACGTTCCGTGGAGCTATATAG--GGCAGCCAT-----AG------------------------------------------------------------CAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................ACGATGTACGTTCCGTGGAGC.................................................................................................................................................................................................................................................2120.50110
droAna3
GAGGAGA--TGCTCAAGAGCG---------GAGGACCTCCACCGGACTGCGAAGACGGTGG-----------------------ACCAGGGTAGCATCAAGGTGATAG--------------------CGTGCCAAGATGCGAGGTCTGTAAACCTCTACAA--GCGAATGAT-----TGCGTCGCTTGGGGAGGTCTACCCAGGAGCCAGACTGGAGGCGGTGGACTCGGACAAGATCCCCAGCAAACCGAGGGCCCGCGTATGGCTGACAG--------------------------------------GAGAGGATCTACAGTCGGATGCGAAGAGTAAACCTGGAGGCATCGA--------------CTTGAAGATGGACG-----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGGG.............................................................................................................................................................................................................22200.70141120010
.....................................................................................................................................................................................................TACCCAGGAGCCAGACTGGAGGCGGT.............................................................................................................................................................................26200.6513760000
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGGGGA...........................................................................................................................................................................................................24200.65131300000
..............................................................................................CATCAAGGTGATAG--------------------CGTGCCAAGA..................................................................................................................................................................................................................................................................24200.459801000
............................................................................................................................................................................................................................................ATCCCCAGCAAACCGAGGGCCC..........................................................................................................................................22200.459090000
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGG..............................................................................................................................................................................................................21200.408800000
.............CAAGAGCG---------GAGGACCTCCACCGG...............................................................................................................................................................................................................................................................................................................................................................23200.357700000
............................................................................................................................................................................................................................................ATCCCCAGCAAACCGAGGGCCCG.........................................................................................................................................23200.357700000
......................................................................................................TGATAG--------------------CGTGCCAAGATGCGAGGTCTG.......................................................................................................................................................................................................................................................27200.306600000
.............CAAGAGCG---------GAGGACCTCCACCGGA..............................................................................................................................................................................................................................................................................................................................................................24200.306600000
.............CAAGAGCG---------GAGGACCTCCACCGGAC.............................................................................................................................................................................................................................................................................................................................................................25200.255500000
.......................................................................................................................................................................AATGAT-----TGCGTCGCTTGGGGAG..........................................................................................................................................................................................................22200.255401000
.....................................TCCACCGGACTGCGAAGACG...................................................................................................................................................................................................................................................................................................................................................20200.204220000
.......................................................................................................GATAG--------------------CGTGCCAAGATGCGAGGTCT........................................................................................................................................................................................................................................................25200.204004000
.....................................................................................................................................................................................................TACCCAGGAGCCAGACTGGAGGCGG..............................................................................................................................................................................25200.153030000
....AGA--TGCTCAAGAGCG---------GAGGACC.......................................................................................................................................................................................................................................................................................................................................................................22200.153120000
..........................................................................................GTAGCATCAAGGTGATAG--------------------CGTGC.......................................................................................................................................................................................................................................................................23200.153300000
.......................................................................................................GATAG--------------------CGTGCCAAGATGCGAGGC..........................................................................................................................................................................................................................................................23200.153030000
...................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGGCGG..............................................................................................................................................................................27200.153300000
.....................................................................................................................................................................................................................................................................................................................................TCGGATGCGAAGAGTAAACCTGG................................................23200.102200000
................GAGCG---------GAGGACCTCCACCGGA..............................................................................................................................................................................................................................................................................................................................................................21200.102200000
GAGGAGA--TGCTCAAGAGCG---------GAGGACC.......................................................................................................................................................................................................................................................................................................................................................................26200.102200000
................................................................................................................................................................AA--GCGAATGAT-----TGCGTCGCTTGG..............................................................................................................................................................................................................23200.102000002
....................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGAG..................................................................................................................................................................................22200.102200000
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGGGGAG..........................................................................................................................................................................................................25200.102200000
.....................................................................................................................................................................................GTCGCTTGGGGAGGTCTACCC..................................................................................................................................................................................................21200.102200000
............................................................................................................................................................................................................GAGCCAGACTGGAGGCGGTGG...........................................................................................................................................................................21200.102200000
..................................ACCTCCACCGGACTGCGAAGACG...................................................................................................................................................................................................................................................................................................................................................23200.102200000
..........................................................................................................................................................................................................................................................................................................................................TGCGAAGAGTAAACCTGGAGGCATCG........................................26200.102200000
.....................................................................................................GTGATAG--------------------CGTGCCAAGATGCGAGGTC.........................................................................................................................................................................................................................................................26200.102200000
....................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGAGGCG...............................................................................................................................................................................25200.102200000
.................................................................................................................................................................A--GCGAATGAT-----TGCGTCGCTTGG..............................................................................................................................................................................................................22200.102200000
...............................................................................................................................................................................................................CCAGACTGGAGGCGGTGGACT........................................................................................................................................................................21200.102200000
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGGGGAGG.........................................................................................................................................................................................................26200.102200000
.............................................................................................................................................................................................................AGCCAGACTGGAGGCGGTGG...........................................................................................................................................................................20200.102200000
........................................................................................................................................................................................................................................................................................................................................GATGCGAAGAGTAAACCTGGAGG.............................................23200.102200000
.......................................................................................................................................................................AATGAT-----TGCGTCGCTTGGGGAGG.........................................................................................................................................................................................................23200.102200000
.......................................................................................................GATAG--------------------CGTGCCAAGATGCGA.............................................................................................................................................................................................................................................................20200.102101000
.........................................................................................................................................................................TGAT-----TGCGTCGCTTGGGGAGGT........................................................................................................................................................................................................22200.051100000
..........................................................................................................................................................................................................AGGAGCCAGACTGGAGGCGGTGGACT........................................................................................................................................................................26200.051100000
........................................................................................................................................................................ATGAT-----TGCGTCGCTTGGGGAGG.........................................................................................................................................................................................................22200.051100000
GAGGAGA--TGCTCAAGAGCG---------GAGG..........................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.....................................................................................................................................................................................GTCGCTTGGGGAGGTCTACCCA.................................................................................................................................................................................................22200.051100000
.......................................................................................................................................................................AATGAT-----TGCGTCGCTTGGGGAGGT........................................................................................................................................................................................................24200.051100000
............................................................................................................................................................................T-----TGCGTCGCTTGGGGAGGT........................................................................................................................................................................................................19200.051100000
................................................................................................................................................................AA--GCGAATGAT-----TGCGTCGCTTGGGGAT..........................................................................................................................................................................................................27200.051100000
..............AAGAGCG---------GAGGACCTCCACCGGACT............................................................................................................................................................................................................................................................................................................................................................25200.051100000
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGGGGATA.........................................................................................................................................................................................................26200.051100000
......................................................................................................TGATAG--------------------CGTGCCAAGATGCGAGGT..........................................................................................................................................................................................................................................................24200.051100000
.........................................................................................................TAG--------------------CGTGCCAAGATGCGAGGTC.........................................................................................................................................................................................................................................................22200.051100000
....................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGAGGCGG..............................................................................................................................................................................26200.051100000
.........................................................................................................................................................CCTCTACAA--GCGAATGAT-----TGCGTCGC..................................................................................................................................................................................................................26200.051001000
........................................................................................................................................................................ATGAT-----TGCGTCGCTTGGGGAGGTC.......................................................................................................................................................................................................24200.051100000
.................................GACCTCCACCGGACTGCGAAGACG...................................................................................................................................................................................................................................................................................................................................................24200.051010000
...........................................................................................................................................................................................................................................................................................................................................GCGAAGAGTAAACCTGGAGGCATCG........................................25200.051100000
....................................................................................................................................................................................................................................................................................................................................GTCGGATGCGAAGAGTAAACCT..................................................22200.051010000
................................................................................................TCAAGGTGATAG--------------------CGTGCCAAGA..................................................................................................................................................................................................................................................................22200.051010000
................................................................................................................................................................AA--GCGAATGAT-----TGCGTCGCTTGGGG............................................................................................................................................................................................................25200.051100000
.................................................................................................CAAGGTGATAG--------------------CGTGCCAAGATGC...............................................................................................................................................................................................................................................................24200.051000010
....................................................................................................GGTGATAG--------------------CGTGCCAAGATGCGAG............................................................................................................................................................................................................................................................24200.051100000
..............................................................................................CATCAAGGTGATAG--------------------CGTGC.......................................................................................................................................................................................................................................................................19200.051100000
..........................................................................................................................................................CTCTACAA--GCGAATGAT-----TGCGTCGCT.................................................................................................................................................................................................................26200.051010000
..........................................................................................................................................................CTCTACAA--GCGAATGAT-----TGC.......................................................................................................................................................................................................................20200.051001000
.....................................................................................................................................................................................................TACCCAGGAGCCAGACTGGAGGCGGTG............................................................................................................................................................................27200.051001000
...........................................................................................................................................................................................................................................................................................................................................GCGAAGAGTAAACCTGGAGGCATC.........................................24200.051010000
......A--TGCTCAAGAGCG---------GAGGACCTC.....................................................................................................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGGC................................................................................................................................................................................25200.051100000
....................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGAC..................................................................................................................................................................................22200.051010000
...................................................................................................................................................................................................TCTACCCAGGAGCCAGACTGGAGG.................................................................................................................................................................................24200.051100000
..................................................................................................................................................................................................................................................AGCAAACCGAGGGCCCGCGTATGG..................................................................................................................................24200.051010000
.................................GACCTCCACCGGACTGCGAAGAC....................................................................................................................................................................................................................................................................................................................................................23200.051010000
.....................................................................................................................................................................CGAATGAT-----TGCGTCGCTTGGG.............................................................................................................................................................................................................21200.051100000
........................................................................................................................................................................................................CCAGGAGCCAGACTGGAGGCG...............................................................................................................................................................................21200.051100000
......................................................................................................................................................................GAATGAT-----TGCGTCGCTTGGGG............................................................................................................................................................................................................21200.051100000
......................................................................................................TGATAG--------------------CGTGCCAAGATGCGA.............................................................................................................................................................................................................................................................21200.051100000
.........................................................................................................................................................................TGAT-----TGCGTCGCTTGGGGAGGTCTACC...................................................................................................................................................................................................27200.051100000
........................................................................................................................................................................................................................................................................................................................................GATGCGAAGAGTAAACCTGGAGGCAT..........................................26200.051100000
....................................................................................................GGTGATAG--------------------CGTGCCAAGATGCGAT............................................................................................................................................................................................................................................................24200.051000010
....................................................................................................GGTGATAG--------------------CGTGCCAAGATGCGAGGTC.........................................................................................................................................................................................................................................................27200.051100000
....................................................................................................................................................................GCGAATGAT-----TGCGTCGCTTGGGGAGGT........................................................................................................................................................................................................27200.051100000
....................................................................................................................................................................................................CTACCCAGGAGCCAGACTGGA...................................................................................................................................................................................21200.051100000
................................................................................................TCAAGGTGATAG--------------------CGTGCCAAGATGC...............................................................................................................................................................................................................................................................25200.051100000
.............CAAGAGCG---------GAGGACCTCCACCG................................................................................................................................................................................................................................................................................................................................................................22200.051000001
............TCAAGAGCG---------GAGGACCTCCACCGG...............................................................................................................................................................................................................................................................................................................................................................24200.051100000
........................................................................................................................................................................ATGAT-----TGCGTCGCTTGGGGA...........................................................................................................................................................................................................20200.051100000
...............................................................................................................................................................................................................CCAGACTGGAGGCGGTGGA..........................................................................................................................................................................19200.051100000
................................................................................................................................CGTGCCAAGATGCGAGGTCTGT......................................................................................................................................................................................................................................................22200.051000010
................................................................................................................................CGTGCCAAGATGCGAGGT..........................................................................................................................................................................................................................................................18200.051001000
......................................................................................................................................................................................................ACCCAGGAGCCAGACTGGAGGCGG..............................................................................................................................................................................24200.051100000
droBip1
TGGGCGT--TCGTGGAGGAGA---------CCAGCCGACCCTAAAACCATCCTGACGATGCTTAGGGTGTGCAATCCGACGCTTCCTACGGCGGACTGGAAAGTCGCCAAGGTCAAGGAGGCGGTAGGACTGCGGAGGCA---GGTCGTCCTCACTCTCAACGAGGAGAACGTGAATGTC------------------------------------------------------------CTGGAAAAGTCAGAGC-ACCGGATCAAATACGGATTCGAGCACGTGACGGTCCGTATCTACAAATCTGATGTGAAGAGCA--GAACC-------------------GGAAATATCGAGCTGAAGGAAGATGCACAAGAGCCAGA------------SizeHit CountTotal NormTotal
No Reads
droEle1
CAG--------------------------------CCAACACCATGCTGCAAGGACGCAGGGTGGT------------------TTTAAGGCAGCATCAAAGTGGTGG--------------------CCTGCGATAGTCAGCGGTCGGCGAGGTT-----------------------------------------TACAAAGGGGC------------GCTGGATTGGCGTGACGT----------------------------------------------------------------------------------------------------------------------------------CCCCATTAGGCCCCGAGCGAGGATCTGGSizeHit CountTotal NormTotal
No Reads
droRho1
CGTATGG--TACGCGAGAAGC---------CCGGTTCATCGCCTTGCTGTATGGACGCGGGCTGGT------------------ACCAGGGCAGTGTAAAAGTGGTGG--------------------CCTGCGATAATCAGCGATCAGCTGACCTGTACAA--ACATTCGGT-----AGCACAGCTCGGAGCAGCTTACGAAGGGGCGA-------------------------------------------------AC---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAGAAAT--ACGTGGTGGGCTGTGGTGAGTCAGGTTCACCGCCCAGCTGCGTGGACGCCGGCTGGT------------------ATTATGGCAGTGTCAAAGTGGTGG--------------------CCTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGAAAGTGCTGGACGAAAACC---------CAGGACCACCACCTGACTGCACAGATGCAGGGTGGT------------------ACCAGGGCAACGTAAAGTTGATCG--------------------CCTGTGAGGACGAGAGATCGGCAGCGCTCTACAA--GGCTGCCAT-----TACCAAAGTTGGCAAGGTCAACCCCGGGGCCA------------------------------------------------AGCTA-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
CTGAAATGCTAGCCGAAGAAC---------CTGGACC-CCTTCTGTCTGCAAAGACGTGGGATGGT------------------TCCAAGGCGGCGTCAAGGTGATCG--------------------CCTGTAACGATGAATGCTATGCGGAGCTGTACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................CTGTAACGATGAATGCTATGCGGA...................................................................................................................................................................................................................................................2411.00101000000000
......TGCTAGCCGAAGAAC---------CTGGACC-C.....................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
....................................................................................................................................TAACGATGAATGCTATGCGGAG..................................................................................................................................................................................................................................................2211.00101000000000
.............................................................ATGGT------------------TCCAAGGCGGCGTCAAG.......................................................................................................................................................................................................................................................................................................22200.40806001010000
.............................................................ATGGT------------------TCCAAGGCGGCGTCAAGG......................................................................................................................................................................................................................................................................................................23200.35706000010000
.............................................................ATGGT------------------TCCAAGGCGGCGTCAAGGTG....................................................................................................................................................................................................................................................................................................25150.07101000000000
.............................................TCTGCAAAGACGTGGGATGGT------------------TCCA....................................................................................................................................................................................................................................................................................................................25200.05101000000000
............................................................GATGGT------------------TCCAAGGCGGCGTCAAG.......................................................................................................................................................................................................................................................................................................23200.05101000000000
.............................................TCTGCAAAGACGTGGGATGGT------------------TCCAA...................................................................................................................................................................................................................................................................................................................26200.05101000000000
...........................................TGTCTGCAAAGACGTGGGATGGT------------------TCC.....................................................................................................................................................................................................................................................................................................................26200.05101000000000
.............................................................ATGGT------------------TCCAAGGCGGCGTCAA........................................................................................................................................................................................................................................................................................................21200.05101000000000
............................................................GATGGT------------------TCCAAGGCGGCGTCAAGG......................................................................................................................................................................................................................................................................................................24200.05100000010000

Generated: 05/18/2015 at 02:59 AM