ID:

dps_2091

Coordinate:

Unknown_group_6:15798-15948 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.9 -8.6

Flybase annnotation

CDS [Dpse\GA24018-cds]; exon [dpse_GLEANR_13579:2]; intron [Dpse\GA24018-in]

Repeatable elements

NameClassFamilyStrand
BEL_I-intLTRPao-
mature
star
  1. dps_2091  Unknown_group_6:15872-15895 +
  2. dps_1816  Unknown_group_16:32114-32137 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCGGTCCTTGCAAGGAAGTCGATGTACAAAGCGAAAGCAATGGCTATTTGTGTGCAAGAGATATGACCAGGAGGAAGCTTTGTTGATCATAGAATTAAGAGCATTTCCTTCATCGGAAATGTGTAGATTAACTTAGGGTTTGACCTTTGCTTCCATCCGCGCAGCGTCCTCAGTCTAGAGTGTAAACTTTGCCTTAGCAGGTGGCCAAGTGCGATGTGATTGGGAAAGCCACGGTGGTCCATTCCACCAC
****************************************************************************************************************************.......(((((((....(((((.(((........))).)).))).....))).)))).********************************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902010
ovaries
V112
male body
SRR902011
testis
M059
embryo
GSM343916
embryo
GSM444067
head
SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACGG................ 25 0 18 11.83 213 159 43 0 9 2 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACG................. 24 0 18 7.00 126 113 2 9 1 0 0 1 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCACGG................ 26 0 17 4.24 72 70 1 0 0 0 0 1 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCCACGG................ 24 0 18 2.50 45 44 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGG............. 23 0 17 2.06 35 29 2 3 0 0 1 0 0
............................................................................................................................................................TCCGCGCAGCGTCCTCAGTCTAGAGTG.................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCAC.................. 23 0 19 1.58 30 28 1 0 1 0 0 0 0
............................................................................................................................TAGATTAACTTAGGGTTTGACCTT....................................................................................................... 24 0 2 1.50 3 3 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCACG................. 25 0 17 1.47 25 20 0 5 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCC.................... 21 0 20 1.25 25 17 4 1 2 1 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTG.............. 22 0 19 1.11 21 11 6 0 4 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCA................... 22 0 20 1.10 22 18 0 2 0 1 1 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGC..................... 20 0 20 1.00 20 11 7 0 0 1 1 0 0
............................................................................................................................TAGATTAACTTAGGGTTTGACCTTTGCTT.................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................TGTGTAGATTAACTTAGGGTTTGACCT........................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCCACG................. 23 0 18 0.94 17 16 0 1 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCA................... 23 0 19 0.89 17 16 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACGGT............... 26 0 18 0.89 16 2 12 0 2 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCAC.................. 24 0 18 0.83 15 13 0 1 0 0 0 1 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCC.................... 22 0 19 0.79 15 10 0 2 1 1 0 1 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCC.......... 24 0 17 0.59 10 7 0 0 0 1 2 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTC........... 25 0 17 0.53 9 5 3 1 0 0 0 0 0
...........................................................................AAGCTTTGTTGATCATAGAATTAAGAG..................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGTGATTGG........................... 22 0 12 0.50 6 5 0 0 0 0 0 1 0
................................................................................................TAAGAGCATTTCCTTCATCG....................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................TAAGAGCATTTCCTTCATCGGAAA................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGTGATTGGG.......................... 23 0 12 0.50 6 4 0 0 1 1 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTC........... 23 0 17 0.47 8 4 0 0 0 1 3 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGT............ 24 0 17 0.41 7 6 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGG............. 21 0 17 0.41 7 4 0 3 0 0 0 0 0
................................................................................................................................................................................................CCTTAGCAGGTGGCCAAGTGCGATG.................................. 25 0 5 0.40 2 1 0 0 0 1 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACGT................ 25 1 18 0.39 7 5 0 1 0 1 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCCAC.................. 22 0 19 0.37 7 7 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGT............... 21 0 19 0.37 7 1 0 0 4 2 0 0 0
....................................................................................................................................................................................................................CGATGTGATTGGGAAAGCCACGG................ 23 0 19 0.37 7 6 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGTGATTGGGA......................... 24 0 12 0.33 4 2 0 0 2 0 0 0 0
...............................................................................................................................................................................................GCCTTAGCAGGTGGCCAAGTG....................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGGTCC.......... 23 0 17 0.29 5 4 0 1 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCACGGT............... 27 0 17 0.29 5 3 0 1 0 0 0 0 1
.....................................................................................................................................................................................................................GATGTGATTGGGAAAGCCACGGTGG............. 25 0 17 0.29 5 3 1 1 0 0 0 0 0
.................................................................................................................................................................................................CTTAGCAGGTGGCCAAGTGCGATG.................................. 24 0 7 0.29 2 1 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACGGTG.............. 27 0 18 0.28 5 4 0 1 0 0 0 0 0
........................................................................................................................................................TCCATCCGCTCAGCGTCCTCAGTCT.......................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCCACGGTGG............. 27 0 16 0.25 4 4 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAG...................... 19 0 20 0.25 5 4 1 0 0 0 0 0 0
......................................................................................................................................................................................................................ATGTGATTGGGAAAGCCACGGTGG............. 24 0 17 0.24 4 4 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCA......... 25 0 17 0.24 4 2 0 2 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTCC.......... 26 0 17 0.24 4 3 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGGTC........... 22 0 17 0.24 4 2 0 1 0 0 1 0 0
.....................................................................................................................................................................................................................GATGTGATTGGGAAAGCCACGGTG.............. 24 0 19 0.21 4 2 0 0 2 0 0 0 0
........................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTGG............. 22 0 17 0.18 3 3 0 0 0 0 0 0 0
..........................ACAACGCGAAATCAATGGC.............................................................................................................................................................................................................. 19 2 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTG.............. 21 0 19 0.16 3 1 2 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGTGATTG............................ 21 0 13 0.15 2 2 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTTGATC.................................................................................................................................................................. 25 0 13 0.15 2 2 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTTGAA................................................................................................................................................................... 24 1 13 0.15 2 1 0 0 0 1 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGC..................... 19 0 20 0.15 3 3 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTAGCAGGTGGCCAAGTGCGA.................................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................AGGAGGAAGCTTTGTTGA.................................................................................................................................................................... 18 0 14 0.14 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTAGCAGGTGGCCAAGTGCGAT................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCCATT....... 23 0 17 0.12 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGATGTGATTGGGAAAGCCACGGTGG............. 26 0 17 0.12 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGGTCCATTC...... 27 0 17 0.12 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTGGTCC.......... 25 0 17 0.12 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTCC.......... 21 0 17 0.12 2 0 0 1 0 0 0 1 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCAT........ 26 0 17 0.12 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCCACGGT............... 25 0 18 0.11 2 2 0 0 0 0 0 0 0
............................................................................................................CTTCATCGGAAATGTGTAGATTAAC...................................................................................................................... 25 0 9 0.11 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TTTGTCTTAGCAGGTGGCCAAGTGC...................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTGTCTTAGCAGGTGGCCAAGTGCGATG.................................. 28 1 9 0.11 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGG................ 18 0 19 0.11 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATGTGATTGGGAAAGCCACGGT............... 23 0 19 0.11 2 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGG................ 20 0 19 0.11 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTG.............. 20 0 19 0.11 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGA..................... 20 1 20 0.10 2 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAA....................... 18 0 20 0.10 2 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................................CGATGTGATTGGGAAAGCCAC.................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCC.................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0
..............................................................TCTGACCAGGAGGAAGCTTTGTTG..................................................................................................................................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTAGCAGGTGGCCAAGTGCGATGTGA............................... 26 0 11 0.09 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGCAGGTGGCCAAGTGCGATGTGAT.............................. 25 0 11 0.09 1 1 0 0 0 0 0 0 0
.............................................................ATATAACCACGGGGAAGCT........................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................TAGCAGGTGGCCAAGTGCGAT................................... 21 0 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................................................................TGACTCAGGGTTTGACCTGT...................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................TTAGCAGGTGGCCAAGTGCGATGTGAT.............................. 27 0 11 0.09 1 1 0 0 0 0 0 0 0
..............................................................................................................TCATCGGAAATGTGTAGATTAACTT.................................................................................................................... 25 0 11 0.09 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GCAGGTGGCCAAGTGCGATG.................................. 20 0 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................TAGCAGGTGGCCAAGTGTC..................................... 19 2 12 0.08 1 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................TGGCCAAGTGCTATGTGATTGGGA......................... 24 1 12 0.08 1 0 0 0 0 0 1 0 0
............................................................................................................................TAGATTAACTTGGGGTTTG............................................................................................................ 19 1 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGTGATTGGGAA........................ 25 0 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGGGATTGGGA......................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGGGATTGGA.......................... 23 2 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGCCAAGTGCGATGTGATTGGGAAAG...................... 27 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTG........................................................................................................................................................................ 19 0 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCCAAGTGCGATGTGATTGGGAAA....................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTTGAT................................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCCAAGTGCGATGTGATTGG........................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTTGA.................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTT...................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTTG..................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................GTGTAGACTAACTTGGGATTTGACC......................................................................................................... 25 3 13 0.08 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCCATTCCAC... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................ACCAGGAGGAAGCTTTGTTGATC.................................................................................................................................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................TGACCAGGAGGAAGCTTTGTTGATT.................................................................................................................................................................. 25 1 13 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGTGCGATGTGATTGGGAAAGCCAC.................. 25 0 14 0.07 1 1 0 0 0 0 0 0 0
......................................................................GGAGGAAGCTTTGTTGAT................................................................................................................................................................... 18 0 14 0.07 1 1 0 0 0 0 0 0 0
...........................................................AGATATGAGCAGAGGGAAGC............................................................................................................................................................................ 20 3 14 0.07 1 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................AGTGCGATGTGATTGGGAAA....................... 20 0 15 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAAGTGCGATGTGATTGGGAAAGC..................... 24 0 15 0.07 1 1 0 0 0 0 0 0 0
.......................................................CAAGAGGGATGGCCAGGAGGA............................................................................................................................................................................... 21 3 15 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCAAGTGCGATGTGATTGGGAAAGC..................... 25 0 15 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACGGTGG............. 28 0 16 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTCCCTT....... 24 1 17 0.06 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCATT....... 27 0 17 0.06 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGG............. 20 0 17 0.06 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................ATTGGGAAAGCCACGGTGGTCC.......... 22 0 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCATTC...... 28 0 17 0.06 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTT........... 25 1 17 0.06 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTCCC......... 27 1 17 0.06 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................ATTGGGAAAGCCACGGTGGTC........... 21 0 17 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTA........... 19 1 17 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTCCATT....... 24 0 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGGCC.......... 24 1 17 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCGCGG................ 26 1 17 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTGGTC........... 24 0 17 0.06 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATGTGATTGGGAAAGCCACGGTGGC............ 26 1 17 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCCAAA....... 23 2 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTATTGGGAAAGCCACGGTGGT............ 22 1 17 0.06 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................GGGCGATGTGATTGGGAAAGCCACGG................ 26 1 17 0.06 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGT............ 22 0 17 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTA........... 20 1 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTATTGGGAAAGCCACGGTGGTCC.......... 24 1 17 0.06 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTCTA......... 27 1 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTTT.......... 24 2 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATTGGGAAAGCCACGGAGGTCC.......... 24 1 17 0.06 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGCCACT................. 25 1 18 0.06 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAGAGCCACGG................ 25 1 18 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGGGATTGGGAAAGCCACGG................ 25 1 18 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGACTGGGAAAGCCACGG................ 24 1 18 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCACGA................ 25 1 18 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGATTGGGAAAGCCACGGTG.............. 26 0 18 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGGAAAGCCACGGTGGGCCG......... 21 2 18 0.06 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGCGATGGGATTGGGAAAGCCACG................. 24 1 18 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATGTGATCGGGAAAGCCACGGT............... 25 1 18 0.06 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGATGTGATTGGGAAAGCCACGGT............... 24 0 19 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTGATTGGGAAAGCCACGG................ 19 0 19 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAA....................... 19 0 19 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGTAAGCCCCG................. 25 2 19 0.05 1 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................CGATGTGATTGGGAAAGCCACG................. 22 0 19 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATGTGATTGGGAAAGCCACG................. 20 0 19 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTGTGATTGGGAAAGCCACGGT............... 22 1 19 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATGTGATTGGGAAAGCCACGGTG.............. 23 0 19 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGGG.............. 22 1 19 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATGTGATTGGGAAAGCCACGG................ 22 0 19 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGCGATGTGATTGGGAAAGC..................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGAAAAA...................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................CATCGGAAATGTGGAGGGT......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................CTGCGATGTGATTGGGAAAGCC.................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTCATTGGGAAAGCCA................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATGTGATTGGGAAAGC..................... 17 0 20 0.05 1 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................CGATGTGATTGGGAAAGC..................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAA...................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCGATGTGATTGGGAAAGCCC................... 22 1 20 0.05 1 0 0 0 1 0 0 0 0
...................................................................................................................GGAAATGTGTAGATTAAAA..................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGATTTGATTGGGAAAGCC.................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCGCCAGGAACGTTCCTTCAGCTACATGTTTCGCTTTCGTTACCGATAAACACACGTTCTCTATACTGGTCCTCCTTCGAAACAACTAGTATCTTAATTCTCGTAAAGGAAGTAGCCTTTACACATCTAATTGAATCCCAAACTGGAAACGAAGGTAGGCGCGTCGCAGGAGTCAGATCTCACATTTGAAACGGAATCGTCCACCGGTTCACGCTACACTAACCCTTTCGGTGCCACCAGGTAAGGTGGTG
********************************************************************.......(((((((....(((((.(((........))).)).))).....))).)))).****************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902011
testis
SRR902010
ovaries
M059
embryo
V112
male body
GSM343916
embryo
M062
head
GSM444067
head
...............................................................................................................................................................CGCGTCGCAGGAGTCAGATCTCACAT.................................................................. 26 0 1 8.00 8 0 5 3 0 0 0 0 0
.....................................................................................................................................................................................................CGTCCACCGGTTCACGCTACACT............................... 23 0 11 2.00 22 20 2 0 0 0 0 0 0
..........................................................................................................................................CAAACTGGAAACGAAGGTAGGCGCGT....................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................GTCCACCGGTTCACGCTACACT............................... 22 0 12 1.50 18 16 1 1 0 0 0 0 0
...............................................................................................................................................................CGCGTCGCAGGAGTCAGATCTCACATT................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.......GTACGTTCCTTAAGCTAGATGTTT............................................................................................................................................................................................................................ 24 3 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................CGTCCACCGGTTCACGCTACAC................................ 22 0 11 1.00 11 11 0 0 0 0 0 0 0
....................................................................................................................................................................CGCAGGAGTCAGATCTCACATTTGAAA............................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
..........CGTTCCTTAAGCTAGATGTTTC........................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTCGGTGCCACCAGGTAAGGT.... 22 0 15 0.67 10 10 0 0 0 0 0 0 0
................................................................................................................................................................................................GGAATCGTCCACCGGTTCACGCTACAC................................ 27 0 5 0.60 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCCACCGGTTCACGCTACAC................................ 21 0 12 0.50 6 6 0 0 0 0 0 0 0
..........CGTTCCTTAAGCTAGATGT.............................................................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0
.........ACGTTCCTTAAGCTAGATGT.............................................................................................................................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCGTCCACCGGTTCACGCTACACT............................... 25 0 11 0.45 5 5 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCGTCCACCGGTTCACGCTACACT............................... 24 0 11 0.45 5 5 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CCCTTTCGGTGCCACCAGGTAAGGT.... 25 0 14 0.43 6 5 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................TTCGGTGCCACCAGGTAAGGT.... 21 0 17 0.41 7 6 0 0 0 1 0 0 0
................................................................................................................................................................................................................................CTTTCGGTGCCACCAGGTAAGGT.... 23 0 15 0.40 6 6 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGTGCCACCAGGTAAGGT.... 18 0 17 0.35 6 6 0 0 0 0 0 0 0
...............................................................................................................................................................................................CGGAATCGTCCACCGGTTCACGCTACACT............................... 29 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................GTAGGCGCGTCGCAGGAGTCAG........................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCCACCGGTTCACGCTACACT............................... 21 0 12 0.33 4 3 0 0 0 1 0 0 0
......................................................................CCTCCTGCGAAACAACTAGTATCT............................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACCCTTTCGGTGCCACCAGGTAAGGT.... 27 0 14 0.29 4 3 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCTTTCGGTGCCACCAGGTAAGGT.... 24 0 14 0.29 4 4 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CGTCCACCGGTTCACGCTACA................................. 21 0 11 0.27 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................CCACCGGTTCACGCTACACT............................... 20 0 12 0.25 3 3 0 0 0 0 0 0 0
......................................................................................................ATAAAGGAAGTAGCCTTTACACATCTAA......................................................................................................................... 28 1 8 0.25 2 0 0 2 0 0 0 0 0
.................TCAGCTACATGTTTTGCTTTCGTTAC................................................................................................................................................................................................................ 26 1 4 0.25 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................CGGTGCCACCAGGTAAGGT.... 19 0 17 0.24 4 3 1 0 0 0 0 0 0
...........................................................................................................GGAAGTAGCCTTTACACATCTAATTGA..................................................................................................................... 27 0 9 0.22 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACCCTTTCGGTGCCACCAGGTAAGGT.... 26 0 14 0.21 3 3 0 0 0 0 0 0 0
................................................................................................................................................................................................GGAATCGTCCACCGGTTCACGC..................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CGTCCACCGGTTCACGCTACACTA.............................. 24 0 11 0.18 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................CCACCGGTTCACGCTACACTA.............................. 21 0 12 0.17 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCGGTTCACGCTACACTAACCCTT........................ 24 0 13 0.15 2 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................................ACGCTACACTAACCCTTTCGGT................... 22 0 20 0.15 3 2 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................AAACCCTTTCGGTGCCACCAGGTAAGGT.... 28 1 14 0.14 2 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................GAATCGTCCACCGGTTCACGCTACACT............................... 27 0 7 0.14 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TCACGCTACACTAACCCTTTCGGT................... 24 0 15 0.13 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCGGTGCCACCAGGTAAGGT.... 20 0 17 0.12 2 2 0 0 0 0 0 0 0
...........................................................................................................GGAAGTAGCCTTTACACATCTAAT........................................................................................................................ 24 0 9 0.11 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCGTCCACCGGTTCACGCTACAC................................ 23 0 11 0.09 1 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................TCGTCCACTGGTTCACGCTACACT............................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCGTCCACCGGTTCACGCTACAC................................ 24 0 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................................................................GTAGCCTTTACACATCTAATTGA..................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CGTCCACCTGTTCACGCTACAC................................ 22 1 11 0.09 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCCACCGGTTCACGCTACACTAACCC.......................... 27 0 11 0.09 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................CATCCACCGGTTCACGCTACAC................................ 22 1 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CACCGGTTCACGCTACACTAACCC.......................... 24 0 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CACCGGTTCACGCTACACTAACCCTT........................ 26 0 12 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................TTCCACCGGTTCACGCTACACT............................... 22 1 12 0.08 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................GTCCACCGGTTCACGCTACACTA.............................. 23 0 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................AGTAGCCTTTACACATCTAATTTA..................................................................................................................... 24 1 13 0.08 1 0 0 0 1 0 0 0 0
..................................................................TGGTCCTCCTTCGAAACAACTAGTAT............................................................................................................................................................... 26 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................ACTGGTCCTCCTTCGAAACAACTAG.................................................................................................................................................................. 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................CTGGTCCTCCTTCGAAACAACTA................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCGGTTCACGCTACACTAACCCT......................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CACCGGTTCACGCTACACTAA............................. 21 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................CTGGTCCTCCTTCGAAACAACTAGTAT............................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTACCCTTTCGGTGCCACCAGGTAAGGT.... 28 1 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACCCTTTCGGTGCCACCAGGTAAGGTC... 27 1 14 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCACGCTACACTAACCCTTTCGG.................... 23 0 15 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAACTTTCGGTGCCACCAGGTAAGGT.... 26 2 15 0.07 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CGGTTCACGCTACACTAACCCTTT....................... 24 0 15 0.07 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTGCCACCAGGTAAGGTGGTG 21 0 15 0.07 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAAATTTCGGTGCCACCAGGTAAGGT.... 27 3 15 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTTCACGCTACACTAACCCTTTCGGT................... 26 0 15 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTTTCGGTGCCACCAGGTAAGGT.... 23 1 15 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GGTTCACGCTACACTAACCC.......................... 20 0 15 0.07 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACTTTCGGTGCCACCAGGTAAGGT.... 24 1 15 0.07 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TCTTTCGGTGCCACCAGGTAAGGT.... 24 1 15 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AACGGTGCCACCAGGTAAGGTGGTG 25 2 15 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTCGGTGCCACCAGGTAAGGTGTT. 24 1 16 0.06 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................GGTGCCACCAGGTAAGGTG... 19 0 16 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACCCTTTCGGTGCCACCAGGTAAGG..... 26 0 16 0.06 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCTTTCGGTGCCACCAGGTAAGG..... 23 0 16 0.06 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CCCTTTCGGTGCCACCAGGT......... 20 0 17 0.06 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TAACCCTTTCGGTGCCACCAGGTA........ 24 0 17 0.06 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGGTGCCACCAGGTAAGGT.... 19 1 17 0.06 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................CCCTTTCGGTGCCACCAGGTA........ 21 0 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTAACCCTTTCGGTGCCACCAGGT......... 24 0 17 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ATCGGTGCCACCAGGTAAGGT.... 21 1 17 0.06 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGGTGCCACCAGGTAAGGT.... 19 1 17 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACCCTTTCGGTGCCACCAGGT......... 21 0 17 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTCGGTGCCACCAGGTAAG...... 20 0 18 0.06 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTTTCGGTGCCACCAGGTAA....... 20 0 18 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTGGTGCCACCAGGTAAGG..... 19 1 19 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTCGGTGCCACCAGGTAAGG..... 20 0 19 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACACTAACCCTTTCGGTGC................. 19 0 19 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CACGCTACACTAACCCTTTCGG.................... 22 0 19 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGTGAAACCGGGTAAGGTGGT. 21 3 20 0.05 1 0 0 0 0 0 1 0 0
............................................................................................GTTAATTCTCATAAAGGAAAT.......................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_6:15748-15998 + dps_2091 GGCGGTCCTTGCA------AGGAAGTCGATGTACAAAGCGAAAGCAATGGCTATTTGTGTGCAAGAGATATGACCAGGAGGAAGC---------TTTGTTGATCATAGAATTAAGA----------GCATTT-CCTTCATCGGAAATGTGT------------------AG---ATT--------AACTTAGGGTTTGACCTTTGCTTCCATCCGCGCAGCGTCCTCAGTCTAGAGTGTAAACT----------TTGC-------CTTAGCAGGTGGCCAAGTGCGA-TGTGATTGGGAAAGCCACGGTGGTCCATTCCACCAC
droPer2 scaffold_43:194134-194384 + GGCGGTCCTTGCA------ACGAAGTCGATGTACAAAGCGAAAGCAATGGCTATTTGTGTGCAAGAGATATGACCAGGAGGAAGC---------TTTGTTGATCATAGAATTAAGA----------GCATTT-CCTTCATCGGAAATGTGT------------------AG---ATT--------AACTTATGGTTTGACCTTTGCTTCCATCCGCGCAGCGTCCTCAGTCTAGAGTGTAAACT----------TTGC-------CTTAGCAGGTGGCCAAGTGCGA-TGTGATTGGGAAAGCCACGGTGGTCCATTCCACCAC
droWil2 scf2_1100000004615:28667-28913 + GTGCACCTTTGCA------CCTAAGTCGCTCAATGAATCGGTAACAGTAGCTGGTTACCCTTAAGAGACGGCTCCAAGACGATAA---------CTTGTTGATTAATAACTCATGCTA--------ATGCTG-TCCTCAAGCATTCCATGA------------------AGCACAGTAATTGGCT-----------GGCGTCGT------------------TCCTCAGTCGCCATGTCAG-TA----AAGCTTTGGCCGTGTGGTTCAGATAGTGGCCATTCCGAT-TGTGGTTTGGTAATCCAAGAGGGTCCCTTCCACCAT
droMoj3 scaffold_2147:2004-2256 + TGAGT-TTCTTGA------TCGGACGCGATGTACAAAGCGCCGGACGAATGCGATGATTCGAATCAGTCGCAGCCATGATGATAC---------TCTAATAAGTAAAGCATCAAAGGGGGACGATGCCATGT-CCTCCGTTGC-CGTCAGA------------------AT---ATT--------GGCCTTAAATTCCG------------------CTTCTGCTGCTGGCGGCACGATAGATCAGCAGAATTTTGATC------GTCGAAGCATCTCCAAACACTCCTGGGAATCATGTAGCCAGGACGGTTCCTTCCACCAT
droAna3 scaffold_13417:3530033-3530269 - ATTGGTTCCGGCC------TCGGATTTGGTTAATAAATCGATAGCAGTAGCTTGCTATTCGAAGGAGGCGGGTCCACGGTGAAAT---------CTTCCTACTCAGCAACTCCTCC----------ATACTT-TCATCCGGAAAGCTATGT------------------AG---AGTTGTGGGCT--------TTGACAGTCGTTCCTCGGTGCT----ACATT---TCTCA--GGAACAGAT--------------A-------GATTGAAAGTGGCCACTCAAGT-TGAGGGTTGGTCAACCATGGGGGTCCGTTCCATCA-
droBip1 scf7180000395746:14128-14378 + GTCGATTCCTCTC------ACGAAGACGATGAACGAAGCGAAGGCAGTAGCTGACTATCCTTAATAAACGGGACCATGAGGAGGA---------TTTGTTGATCATACAAGATAGC----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTTCGTTTCAGCCTTCATCTCTAGGCAGGCCTCTTCTTCTGTCGACAGAACAAACT----------TAGC-------TTTAACAGGTGGCCAAGCTGAA-CGTGACTGAGATAGCCAAGGTGGTCCATTCCACCAT
droKik1 scf7180000302065:6393-6643 + GTGGAGTCCTTCC------ACGAAAACGATGGACGAAGCGAAAGCAGTAGCTGAGTATCCTCATTAAGCGAGACCATGAGGAGAT---------TTTGTTGATCATACAGTTGAGC----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTTGGGTTCGGCCTTTACCTCCAAGCATGCCTCTTCTTCTGTCGACAAAGCAAACT----------TAGC-------CTTAGCGGGTGGCCAAGCTGAA-CGTGACTGAGATAGCCAAGCGGGTCCATTCCACCAG
droFic1 scf7180000454094:591-825 - GATGGCCATTGGA------AAGTAGAGGC----------------TTGGACCTGCAATTCGAAATAAATCGATACACGTACGCAAATACACGCTGCAACTTATCAAACGTGTTAAG----------GAATTTGCAGTTAACAGAAATGTCAACGCACACGGTTCCAATTAG---AGTCGCGG------------------------------------AACGACGCTCTGCAAGATCCTTTACT----------ACAT-------CAAGCAGGGAGGCCATTCCGAT-GAGTTCTGCAAAAGAAATGGAGGTCCATTAGCCCAA
droEle1 scf7180000489503:2635-2835 + ATAGA--------------------------------------------------------CAGTAAATGAGACCATGCTGAAGT---------TCTAGTGATCATACAAGACAGA----------ATATTT-CCCTCATTGGAAATGCGC------------------AG---AGT--------AACGTTCGGCTGAAATATAACTTCTTTGCACTCATCCTCTTTCGTCGGTACCGAAAACT----------TAGC-------TTCTCTAGGTGGGCAAGTTGAG-CGTGACTGGGATAGCCAAGATGGTCCATTCCACCGG
droRho1 scf7180000763070:5624-5874 + GTTGATTTCTCCC------ACGAATACGATGAACGAGACGAAAGCTGTAGCTGAGTATCGTCAACAAACGAGACCATGAAGAGGT---------TTTGTTGATCATACGGGTTAGT----------GAATTT-CCGTCGGCGGGAATGTGT------------------AG---ATT--------AACCTTTGGTTCGGACTTTAAGTCCAGGCATGCTTCTTCTTCTGTCGACAGAATAAACT----------TAGC-------CTTAACGGGTGGCCAAGTTGAG-CGTGACTGAGATAGCCAAGCTGGTCCATTCCACCAG
droBia1 scf7180000299642:15788-16038 + GTCGATTCCTCTC------ACGAAGACGATGAACGAAGCGAAGGCAGTAGCTGACTATCCTTAATAAACGGGACCATGAGGAGGA---------TTTGTTGATCATACAAGATAGC----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTTCGTTTCAGCCTTCATCTCTAGGCAGGCCTCTCCTTCTGTCGACAGAACAAACT----------TAGC-------TTTAACAGGTGGCCAAGCTGAA-CGTGACTGAGATAGCCAAGGTGGTCCATTCCACCAT
droTak1 scf7180000411159:1504-1754 + GTTGGTTTCTCCC------ACGAAGACGATGCACAAAACGAAAGCAGTAGCTGAGTATCCTCACCAAACGAGACCATGAAGAGGT---------TTTGTTGATCAGACAGGTTAGA----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---GTT--------AACCTTAGGATCGGCTTTTACCTCCAGGGATGCCTCTTCTTCTGTCGACAGAACAAACT----------TAGC-------CTTAACGGGTGGCCAAGTTGTG-CGTGACTGAAATAGTCAAGCTGGTCCATTCCACCAA
droEug1 scf7180000409403:7311-7561 - GTTGATTCCTCCC------ACGAAGGCGATGAACGAAACGAAAGCAGAAGCTGAGTATCCTCAACAAACGAGACCAGGAGGAGGT---------TTTGTTAATCATTCAAGTTAGT----------AAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTAGGATCGGTTTTTTTTATCCAGGTATGCCTCTTCTTCTGTCGATAGAACAAACT----------TAGC-------CTTCACGGGTGGCCAAGTTGAG-CGTGACTGAGATAGCCAAGCTGGTCCTTTCCACCAG
dm3 chr2RHet:3007812-3008065 + AA---TTCCTATGATGAGATCGAAGAGTGTGAATAAAGCGATGACAGTAGCTAGATACCCTTATAAGACGTGTCCAGGTTGAGAA---------TTTGTGGATGAGTAACTCGTGT----------ATACTT-TCATCAGGAAAGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGTTCCTCGGTGTTGACATCGAAACTTGAAGATACGCTGAACT----------TGCT-------TGTAGAAGGTGGCCACTCAGAG-GTGGGTGTGGCCAGCCAGGACGGACCTTTCCACCAC
droSim2 x:19010903-19011130 + AA---TTCCTTTGTTGCAATCGAAGAGTGTGAATGAAGCGATAACAATAACTAGATATCCTTATAAGACGCGTCCAGGTTGAGTA---------TTTGTGTACGAGTAACTCGTTG----------ATACTT-TCGCCAGGAAAGTTATGT------------------AG---AGTTGTGGGCT--------TTACTGTTCGATCCTACGTGTTGACATCGAAACTTGGAGATAC------------------------------------GTTGGCCACTC--------GGTGTAGCCGGCCAAGACGGTCCTTTCCACCAC
droSec2 scaffold_48:155876-156129 + AA---TTCCTATGATGGGATCGAAGAGTGTGAATAAAGCGATGACAGTAGCTAGATACCCTTATAAGACGCGTCCAGGTTGAGAA---------TTTGTGGATGAGTAACTCGTGT----------ATACTT-TCATCAGGAAAGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGTTCTTCGGTGTTGACATCGAAACTTGAAGATACGCTGAACT----------TGCT-------TGTAGAAGGTGGCCACTCAGAG-GTGGGTGGGGCCAGCCAGGACGGACCTTTCCACCAC
droYak3 v2_chrUn_4006:567-820 - AA---TTCCTATGATGAGATCGAAGGGTGTGAATAAAGCGATGACAGTAGCTAGATATCCTTATAAGACGCGTCCAGGCTGAGAA---------TTTGTGGATGAGTAACTCGGGT----------ATACTT-TCATCAGGAAAGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGTTCTTCGGTGTTGACATCGAAACTTGAAGATACGCTGAACT----------TGCT-------TGTAGAAGGTGGCCACTCAGAG-GTGGGTGTGGCCAGCCAGGACGGACCTTTCCACCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGCGGTCCTTGCA------AGGAAGTCGATGTACAAAGCGAAAGCAATGGCTATTTGTGTGCAAGAGATATGACCAGGAGGAAGC---------TTTGTTGATCATAGAATTAAGA----------GCATTT-CCTTCATCGGAAATGTGT------------------AG---ATT--------AACTTAGGGTTTGACCTTTGCTTCCATCCGCGCAGCGTCCTCAGTCTAGAGTGTAAACT----------TTGC-------CTTAGCAGGTGGCCAAGTGCGA-TGTGATTGGGAAAGCCACGGTGGTCCATTCCACCACSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGG................251811.832130159200004390
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACG.................24187.00126011300019210
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCCACGG................26174.247207000010100
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCACGG................24182.504504400001000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGG.............23172.063502900103200
...................................................................................................................................................................................................................TCCGCGCAGCGTCCTCAGTCTAGAGTG......................................................................................2712.0020200000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCAC..................23191.583002800000110
......................................................................................................................................................T------------------AG---ATT--------AACTTAGGGTTTGACCTT.........................................................................................................................2421.5030300000000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCCACG.................25171.472502000005000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCC....................21201.252501710001420
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTG..............22191.112101100000640
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCA...................22201.102201810102000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGC.....................20201.002001110100700
......................................................................................................................................................T------------------AG---ATT--------AACTTAGGGTTTGACCTTTGCTT....................................................................................................................2911.0010100000000
..................................................................................................................................................TGTGT------------------AG---ATT--------AACTTAGGGTTTGACCT..........................................................................................................................2711.0010100000000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCACG.................23180.941701600001000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCCA...................23190.891701600100000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGGT...............26180.891602000001220
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCCAC..................24180.831501300011000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCC....................22190.791501010012010
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCC..........24170.59100710200000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTC...........25170.5390500001300
.................................................................................AAGC---------TTTGTTGATCATAGAATTAAGA----------G.....................................................................................................................................................................................................2720.5010100000000
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGG...........................22120.5060500010000
...............................................................................................................TAAGA----------GCATTT-CCTTCATCG......................................................................................................................................................................................2020.5010100000000
...............................................................................................................TAAGA----------GCATTT-CCTTCATCGGAAA..................................................................................................................................................................................2420.5010100000000
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGG..........................23120.5060410000010
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTC...........23170.4780410300000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGT............24170.4170600000100
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGG.............21170.4170400003000
.................................................................................................................................................................................................................................................................C-------CTTAGCAGGTGGCCAAGTGCGA-TG..................................2550.4020110000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGT................25180.3970510001000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCAC..................22190.3770700000000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGT...............21190.3770120000040
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGCCACGG................23190.3770600000100
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGGA.........................24120.3340200000020
................................................................................................................................................................................................................................................................GC-------CTTAGCAGGTGGCCAAGTG........................................2130.3310100000000
...................................................................................................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGGTCC..........23170.2950400001000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCCACGGT...............27170.2950300001001
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGCCACGGTGG.............25170.2950300001100
.........................................................................................................................................................................................................................................................................CTTAGCAGGTGGCCAAGTGCGA-TG..................................2470.2920100100000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGGTG..............27180.2850400001000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCACGGTGG.............27160.2540400000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAG......................19200.2550400000100
..............................................................................................................................................................................................................................................................................................A-TGTGATTGGGAAAGCCACGGTGG.............24170.2440400000000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCA.........25170.2440200002000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTCC..........26170.2440300001000
...................................................................................................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGGTC...........22170.2440200101000
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGCCACGGTG..............24190.2140200000020
.................................................................................................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTGG.............22170.1830300000000
.................................................................................................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTG..............21190.1630100000200
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTG............................21130.1520200000000
......................................................................TGACCAGGAGGAAGC---------TTTGTTGATC............................................................................................................................................................................................................................25130.1520200000000
......................................................................TGACCAGGAGGAAGC---------TTTGTTGAA.............................................................................................................................................................................................................................24130.1520110000000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGC.....................19200.1530300000000
.........................................................................................................................................................................................................................................................................CTTAGCAGGTGGCCAAGTGCGA-....................................2270.1410100000000
...........................................................................AGGAGGAAGC---------TTTGTTGA..............................................................................................................................................................................................................................18140.1420200000000
.........................................................................................................................................................................................................................................................................CTTAGCAGGTGGCCAAGTGCGA-T...................................2370.1410100000000
......................................................................................................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCCATT.......23170.1220200000000
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGCCACGGTGG.............26170.1220200000000
...................................................................................................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGGTCCATTC......27170.1220200000000
.................................................................................................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTGGTCC..........25170.1220200000000
.....................................................................................................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTCC..........21170.1220000011000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCAT........26170.1220200000000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCACGGT...............25180.1120200000000
......................................................................................................................................CTTCATCGGAAATGTGT------------------AG---ATT--------AAC........................................................................................................................................2590.1110000000100
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGG................18190.1120200000000
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGCCACGGT...............23190.1120100000100
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGG................20190.1120200000000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTG..............20190.1120200000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGA.....................20200.1020100000100
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAA.......................18200.1020110000000
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGCCAC..................21200.1020200000000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCC....................20200.1020200000000
..........................................................................................................................................................................................................................................................................TTAGCAGGTGGCCAAGTGCGA-TGTGA...............................26110.0910100000000
............................................................................................................................................................................................................................................................................AGCAGGTGGCCAAGTGCGA-TGTGAT..............................25110.0910100000000
...........................................................................................................................................................................................................................................................................TAGCAGGTGGCCAAGTGCGA-T...................................21110.0910100000000
..........................................................................................................................................................................................................................................................................TTAGCAGGTGGCCAAGTGCGA-TGTGAT..............................27110.0910100000000
........................................................................................................................................TCATCGGAAATGTGT------------------AG---ATT--------AACTT......................................................................................................................................25110.0910000000010
.............................................................................................................................................................................................................................................................................GCAGGTGGCCAAGTGCGA-TG..................................20110.0910100000000
...........................................................................................................................................................................................................................................................................TAGCAGGTGGCCAAGTGTC......................................19120.0810000010000
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGGAA........................25120.0810100000000
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGGAAAG......................27120.0810100000000
......................................................................TGACCAGGAGGAAGC---------TTTG..................................................................................................................................................................................................................................19130.0810100000000
...................................................................................................................................................................................................................................................................................GGCCAAGTGCGA-TGTGATTGGGAAA.......................25130.0810100000000
......................................................................TGACCAGGAGGAAGC---------TTTGTTGAT.............................................................................................................................................................................................................................24130.0810100000000
...................................................................................................................................................................................................................................................................................GGCCAAGTGCGA-TGTGATTGG...........................21130.0810100000000
......................................................................TGACCAGGAGGAAGC---------TTTGTTGA..............................................................................................................................................................................................................................23130.0810100000000
......................................................................TGACCAGGAGGAAGC---------TTTGTT................................................................................................................................................................................................................................21130.0810100000000
......................................................................TGACCAGGAGGAAGC---------TTTGTTG...............................................................................................................................................................................................................................22130.0810100000000
......................................................................................................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCCATTCCAC...27130.0810100000000
........................................................................ACCAGGAGGAAGC---------TTTGTTGATC............................................................................................................................................................................................................................23130.0810100000000
......................................................................TGACCAGGAGGAAGC---------TTTGTTGATT............................................................................................................................................................................................................................25130.0810100000000
........................................................................................................................................................................................................................................................................................AGTGCGA-TGTGATTGGGAAAGCCAC..................25140.0710100000000
............................................................................GGAGGAAGC---------TTTGTTGAT.............................................................................................................................................................................................................................18140.0710100000000
........................................................................................................................................................................................................................................................................................AGTGCGA-TGTGATTGGGAAA.......................20150.0710100000000
......................................................................................................................................................................................................................................................................................CAAGTGCGA-TGTGATTGGGAAAGC.....................24150.0710100000000
.....................................................................................................................................................................................................................................................................................CCAAGTGCGA-TGTGATTGGGAAAGC.....................25150.0710100000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGGTGG.............28160.0610100000000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCATT.......27170.0610000001000
...................................................................................................................................................................................................................................................................................................GATTGGGAAAGCCACGGTGG.............20170.0610000001000
....................................................................................................................................................................................................................................................................................................ATTGGGAAAGCCACGGTGGTCC..........22170.0610100000000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTCCATTC......28170.0610000001000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTT...........25170.0610100000000
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTCCC.........27170.0610000000010
....................................................................................................................................................................................................................................................................................................ATTGGGAAAGCCACGGTGGTC...........21170.0610100000000
......................................................................................................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTA...........19170.0610100000000
.....................................................................................................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTCCATT.......24170.0610100000000
.................................................................................................................................................................................................................................................................................................GTGATTGGGAAAGCCACGGTGGTC...........24170.0610100000000
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGCCACGGTGGC............26170.0610100000000
......................................................................................................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCCAAA.......23170.0610100000000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGT............22170.0610100000000
.....................................................................................................................................................................................................................................................................................................TTGGGAAAGCCACGGTGGTA...........20170.0610100000000
..................................................................................................................................................................................................................................................................................................TGATTGGGAAAGCCACGGTGGTTT..........24170.0610100000000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGCCACT.................25180.0610000100000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGA................25180.0610100000000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCACGGTG..............26180.0610100000000
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGCCACGGT...............24190.0510100000000
.................................................................................................................................................................................................................................................................................................GTGATTGGGAAAGCCACGG................19190.0510100000000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAA.......................19190.0510100000000
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGCCACG.................22190.0510100000000
..............................................................................................................................................................................................................................................................................................A-TGTGATTGGGAAAGCCACG.................20190.0510100000000
..............................................................................................................................................................................................................................................................................................A-TGTGATTGGGAAAGCCACGGTG..............23190.0510100000000
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGCCACGG................22190.0510100000000
.........................................................................................................................................................................................................................................................................................GTGCGA-TGTGATTGGGAAAGC.....................21190.0510100000000
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGC.....................17200.0510000000001
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGC.....................18200.0510100000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAA......................19200.0510100000000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCC...................22200.0510000000010
.............................................................................................................................................GGAAATGTGT------------------AG---ATT--------AAAA.......................................................................................................................................19200.0510100000000
droPer2
GGCGGTCCTTGCA------ACGAAGTCGATGTACAAAGCGAAAGCAATGGCTATTTGTGTGCAAGAGATATGACCAGGAGGAAGC---------TTTGTTGATCATAGAATTAAGA----------GCATTT-CCTTCATCGGAAATGTGT------------------AG---ATT--------AACTTATGGTTTGACCTTTGCTTCCATCCGCGCAGCGTCCTCAGTCTAGAGTGTAAACT----------TTGC-------CTTAGCAGGTGGCCAAGTGCGA-TGTGATTGGGAAAGCCACGGTGGTCCATTCCACCACSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGG................25201.60320320000
.................................................................................................................................................................................................................................TCAGTCTAGAGTGTAAACT----------TTGC-------CG.........................................................2511.001100000
.............................................................................................................................................................................................................................................................................................GA-TGTGATTGGGAAAGCC....................18200.153300000
.........TGCA------ACGAAGTCGATGTACAAAGC.............................................................................................................................................................................................................................................................................................2470.141010000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACG.................24200.102000002
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTG..............22200.102020000
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGG..........................23200.102010001
................................................................................................................................................................................................................................................................................................TGTGATTGGGAAAGCCACGGTGGTCC..........26200.102020000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGGT...............26200.102020000
...........................................................................................................................................................................................................................................................................................GCGA-TGTGATTGGGAAAGCCACG.................23200.102020000
...........................................................................AGGAGGAAGC---------TTTGTTGATCATA.........................................................................................................................................................................................................................23200.051010000
............................................................................................................................................................................................................................................................................................CGA-TGTGATTGGGAAAGCCACG.................22200.051010000
........................................................................................................................................................................................................................................................................................AGTGCGA-TGTGATTGGGAAAGCCACGG................27200.051010000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCA...................22200.051010000
................................................................................................................................................................................................................................................................................GGTGGCCAAGTGCGA-TGTGATTGG...........................24200.051000001
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGGA.........................24200.051000001
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGGAAA.......................26200.051010000
..........................................................................................................................................................................................................................................................................................TGCGA-TGTGATTGGGAAAGCCACGA................25200.051010000
..................................................................................................................................................................................................................................................................................TGGCCAAGTGCGA-TGTGATTGGGAAAG......................27200.051000001
......................................................................................................................................................................................................................................................................................................TGGGAAAGCCACGGTGGTCC..........20200.051010000
................................................................................................................................................................................................................................................................................GGTGGCCAAGTGCGA-TGTGATTGGT..........................25200.051010000
droWil2
GTGCACCTTTGCA------CCTAAGTCGCTCAATGAATCGGTAACAGTAGCTGGTTACCCTTAAGAGACGGCTCCAAGACGATAA---------CTTGTTGATTAATAACTCATGCTA--------ATGCTG-TCCTCAAGCATTCCATGA------------------AGCACAGTAATTGGCT-----------GGCGTCGT------------------TCCTCAGTCGCCATGTCAG-TA----AAGCTTTGGCCGTGTGGTTCAGATAGTGGCCATTCCGAT-TGTGGTTTGGTAATCCAAGAGGGTCCCTTCCACCATSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TGTGG...............................27124.00480190290
...........................................................................................................................................................................................................................................TGTCAG-TA----AAGCTTTGGCCGTGTGG...........................................................2592.78250141100
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTGGC..............................................2482.2518010170
...............................................................................................................................................TTCCATGA------------------AGCACAGTAATTGGCT-----------GG..............................................................................................................................26101.9019012070
........................................................................................................................................TCAAGCATTCCATGA------------------AGCACAGTAAT................................................................................................................................................2681.881508070
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TG..................................24121.2515011040
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTGG...............................................2381.13903150
..................................................................................................................................................................................................................................................TA----AAGCTTTGGCCGTGTGGTTCAG......................................................24101.1011010100
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TGT.................................25120.9211010100
................................................................................................................................................TCCATGA------------------AGCACAGTAATTGGCT-----------GG..............................................................................................................................25100.90903060
.........TGCA------CCTAAGTCGCTCAATGAATCGG...........................................................................................................................................................................................................................................................................................26100.90907020
..................................................................................................................................................................................................................................................TA----AAGCTTTGGCCGTGTGGTTCAGA.....................................................25100.90908010
.........TGCA------CCTAAGTCGCTCAATGAATCGGT..........................................................................................................................................................................................................................................................................................27100.80802060
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TGTG................................26120.75902070
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TGTGGT..............................28120.75905040
..................................................................................................................................TG-TCCTCAAGCATTCCATGA------------------AGCACAG....................................................................................................................................................2780.63503020
............................................................................................................................................................................................................................................................TTTGGCCGTGTGGTTCAGATAGTGG...............................................2580.63502030
.TGCACCTTTGCA------CCTAAGTCGCTCAA...................................................................................................................................................................................................................................................................................................26100.60606000
.........................................................................................................................................................................................................................................................AGCTTTGGCCGTGTGGTTCAGATAG..................................................2580.50400220
......................................................................................................................................................................................................................................................................................................TTGGTAATCCAAGAGGGTCCCTTCC.....2520.50101000
...................................................................................................TGATTAATAACTCATGCTA--------ATGCTG-...............................................................................................................................................................................................2520.50101000
................................................................................................................................................TCCATGA------------------AGCACAGTAATTGGCT-----------GGC.............................................................................................................................26100.50503020
.......................................................................................................................................................................................................................................................................................................TGGTAATCCAAGAGGGTCCCTTCCACC..2720.50100010
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTG................................................2280.50401030
..................................................................................................................................................................................................................................................TA----AAGCTTTGGCCGTGTGGTTCAGAT....................................................26100.50501040
.........................................TAACAGTAGCTGGTTACCCTTAAGAG.................................................................................................................................................................................................................................................................2680.50403010
..........................................AACAGTAGCTGGTTACCCTTAAGAGAC...............................................................................................................................................................................................................................................................2770.43300120
..........................................................................................................................................................................................................................................................................TCAGATAGTGGCCATTCCGAT-TGTGGT..............................27120.42501040
.....................................................................................................................................TCCTCAAGCATTCCATGA------------------AGCACAG....................................................................................................................................................2580.38303000
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTGGCCA............................................2680.38311010
...........................................................................................................................................................................................................................................TGTCAG-TA----AAGCTTTGGCCGTGTG............................................................2490.33302010
..........................................................................................................................................................................................................................................................................TCAGATAGTGGCCATTCCGAT-TGTGG...............................26120.33402020
..............................................................................................................................................................................................................................TCCTCAGTCGCCATGTCAG-TA----AAGCTT......................................................................2760.33202000
.............................................................TAAGAGACGGCTCCAAGACGATAA---------CT....................................................................................................................................................................................................................................2630.33100010
......................................................................................................................................................................................................................................................................TGGTTCAGATAGTGGCCATTCCGAT-....................................25120.33403010
...........................................................................................................................................................................................................................................TGTCAG-TA----AAGCTTTGGCCGTGTGGT..........................................................2690.33302010
...............................................................................................................................................TTCCATGA------------------AGCACAGTAATTGGCT-----------G...............................................................................................................................25100.30303000
.............................................................................................................................................CATTCCATGA------------------AGCACAGTAATTGGC............................................................................................................................................25100.30302010
................................................................................................................................................................................TAATTGGCT-----------GGCGTCGT------------------TCCTCAGT..............................................................................................25100.30301020
...........................................................................................................................................AGCATTCCATGA------------------AGCACAGTAATTGG.............................................................................................................................................26100.30302010
...............................................................................................................................................TTCCATGA------------------AGCACAGTAATTGGCT-----------................................................................................................................................24100.30301020
...................................................TGGTTACCCTTAAGAGACGGCTCCA........................................................................................................................................................................................................................................................2570.29200020
.....................TAAGTCGCTCAATGAATCGGTAACAG.....................................................................................................................................................................................................................................................................................26120.25303000
...............................................................................................................................................................................................................................................................................TAGTGGCCATTCCGAT-TGTGGTTTGG..........................26120.25301020
..........................................AACAGTAGCTGGTTACCCTTAAGAG.................................................................................................................................................................................................................................................................2580.25202000
........................................................................................................................................TCAAGCATTCCATGA------------------AGCACAGTAATT...............................................................................................................................................2780.25201010
...........................................................................................................................................................................................................T------------------TCCTCAGTCGCCATGTCAG-TA----AAG.........................................................................2580.25200020
...........................................................................................................................................................................................................T------------------TCCTCAGTCGCCATGTCAG-TA----AAGC........................................................................2680.25200020
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-....................................22120.25301020
.....................................................................................................................................TCCTCAAGCATTCCATGA------------------AGCACAGTAAT................................................................................................................................................2980.25202000
.............................................................................................................................................................................................................................................................TTGGCCGTGTGGTTCAGATAGTGGC..............................................2580.25200020
...........................................................................................................................................................................CACAGTAATTGGCT-----------GGCGTCGT------------------TCC...................................................................................................2590.22201010
...............................................................................................................................................TTCCATGA------------------AGCACAGTAATTGGCT-----------GGCG............................................................................................................................2890.22202000
.............................................................................................................................................................................CAGTAATTGGCT-----------GGCGTCGT------------------TCCT..................................................................................................2490.22202000
..............................................................................ACGATAA---------CTTGTTGATTAATAACTCA...................................................................................................................................................................................................................2650.20101000
.................................................................................................................................................CCATGA------------------AGCACAGTAATTGGCT-----------GG..............................................................................................................................24100.20202000
.........TGCA------CCTAAGTCGCTCAATGAATCG............................................................................................................................................................................................................................................................................................25100.20200020
.TGCACCTTTGCA------CCTAAGTCGCTCAAT..................................................................................................................................................................................................................................................................................................27100.20202000
............................................................................................................................................................................................................................................................................AGATAGTGGCCATTCCGAT-TGTGGTT.............................26120.17202000
...........................................................................................................................................................................................................T------------------TCCTCAGTCGCCATGTCAG-TA----AAGCT.......................................................................2760.17100010
...........................................................................................................................................................................................................T------------------TCCTCAGTCGCCATGTCAG-TA----AAGCTT......................................................................2860.17101000
..........................CGCTCAATGAATCGGTAACAGTAGC.................................................................................................................................................................................................................................................................................25120.17202000
..........................................................................................................................................................................................................................................................................TCAGATAGTGGCCATTCCGAT-TGTGGTT.............................28120.17202000
.............................TCAATGAATCGGTAACAGTAGCTGG..............................................................................................................................................................................................................................................................................25120.17201010
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TGTGGTT.............................29120.17202000
...............................................................................................................................................................................................................................................................................TAGTGGCCATTCCGAT-TGTGGTTTG...........................25120.17202000
...........................................................................................................................................................................................................................................................................CAGATAGTGGCCATTCCGAT-TGTGGT..............................26120.17200020
........................................................................................................................................................................................................................................................................................TTCCGAT-TGTGGTTTGGTAATCCAAGA................2770.14101000
.................................................................................................................................................................................................................................................................................................GTGGTTTGGTAATCCAAGAGGGTCC..........2570.14101000
................................................................................................................................................................................................................................................................................................TGTGGTTTGGTAATCCAAGAGGGTC...........2570.14100010
................................................................................................................................................................................................................................................................................................TGTGGTTTGGTAATCCAAGAGGGTCC..........2670.14100010
....................................................................................................................................................................................TGGCT-----------GGCGTCGT------------------TCCTCAGTCGC...........................................................................................2470.14100010
........................................................................................................................................................................................................................................................................................TTCCGAT-TGTGGTTTGGTAATCC....................23140.14201010
................................................................................................................................................................................................................................................................................................TGTGGTTTGGTAATCCAAGAGGGT............2470.14100010
...............................................TAGCTGGTTACCCTTAAGAGACGGC............................................................................................................................................................................................................................................................2570.14100010
.........................................TAACAGTAGCTGGTTACCCTTAAGAGAC...............................................................................................................................................................................................................................................................2870.14100010
.............................................AGTAGCTGGTTACCCTTAAGAGACGGC............................................................................................................................................................................................................................................................2770.14101000
........................................................................................................................................................................................................TCGT------------------TCCTCAGTCGCCATGTCAG-TA----A...........................................................................2680.13100010
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTGGA..............................................2480.13100010
......................................................................................................................................CCTCAAGCATTCCATGA------------------AGCACAGTAA.................................................................................................................................................2780.13101000
.............................................................................................................................................................................................................................................................TTGGCCGTGTGGTTCAGATAGTGG...............................................2480.13101000
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTGGCCATT..........................................2880.13100010
........................................................................................................................................................................................................TCGT------------------TCCTCAGTCGCCATGTCAG-TA----AAG.........................................................................2880.13101000
........................................................................................................................................TCAAGCATTCCATGA------------------AGCACAGTAATTG..............................................................................................................................................2880.13100010
.........................................TAACAGTAGCTGGTTACCCTTAAGAGA................................................................................................................................................................................................................................................................2780.13101000
...............................................................................................................................................................................................................................................................GGCCGTGTGGTTCAGATAGTGG...............................................2280.13101000
............................................CAGTAGCTGGTTACCCTTAAGAG.................................................................................................................................................................................................................................................................2380.13101000
.........................................................................................................................................CAAGCATTCCATGA------------------AGCACAGTAA.................................................................................................................................................2480.13101000
..............................................GTAGCTGGTTACCCTTAAGAGA................................................................................................................................................................................................................................................................2280.13101000
..............................................................................................................................................................................................................................................................TGGCCGTGTGGTTCAGATAGTGGCC.............................................2580.13101000
..........................................AACAGTAGCTGGTTACCCTTAAGAGA................................................................................................................................................................................................................................................................2680.13100010
.......................................................................................................................................................................................CT-----------GGCGTCGT------------------TCCTCAGTCGC...........................................................................................2180.13100001
.............................................................................................................................................................................................................................................................TTGGCCGTGTGGTTCAGATAGTGGCCA............................................2780.13100010
..............................................................................................................................ATGCTG-TCCTCAAGCATTCCATGA------------------AG.........................................................................................................................................................2680.13101000
........................................................................................................................................TCAAGCATTCCATGA------------------AGCACAGTAA.................................................................................................................................................2580.13101000
.........................................................................................................................................................................................................................................CATGTCAG-TA----AAGCTTTGGCCGTGTT............................................................2690.11101000
.......................................................................................................................................................................................................................................GCCATGTCAG-TA----AAGCTTTGGCCG................................................................2490.11101000
................................................................................................................................................TCCATGA------------------AGCACAGTAATTGGCT-----------GGCG............................................................................................................................2790.11101000
................................................................................................................................................TCCATGA------------------AGCACAGTAATTGGCT-----------GGCGT...........................................................................................................................2890.11101000
.........................................................................................................................................................................AGCACAGTAATTGGCT-----------GGCGTCGT------------------T.....................................................................................................2590.11101000
..........................................................................................................................................................................................................GT------------------TCCTCAGTCGCCATGTCAG-TA----............................................................................2390.11100010
.........................................TAACAGTAGCTGGTTACCCTTAAGA..................................................................................................................................................................................................................................................................2590.11100010
.................................................................................................................................................CCATGA------------------AGCACAGTAATTGGCT-----------GGCG............................................................................................................................2690.11101000
...............................................................................................................................................................................................................................................AG-TA----AAGCTTTGGCCGTGTGGTTC........................................................24100.10100010
..................................................................................................................................................................................................................................................TA----AAGCTTTGGCCGTGTGGTTCAGATT...................................................27100.10100010
.............................................................................................................................................................................................................................................TCAG-TA----AAGCTTTGGCCGTGTGGT..........................................................24100.10101000
.........TGCA------CCTAAGTCGCTCAATGAATC.............................................................................................................................................................................................................................................................................................24100.10101000
.......TTTGCA------CCTAAGTCGCTCAATGAATCG............................................................................................................................................................................................................................................................................................27100.10100001
..GCACCTTTGCA------CCTAAGTCGCTCAA...................................................................................................................................................................................................................................................................................................25100.10101000
..............................................................................................................................................ATTCCATGA------------------AGCACAGTAATTGGCT-----------GG..............................................................................................................................27100.10101000
............................................................................................................................................................................................................................................GTCAG-TA----AAGCTTTGGCCGTGTGGT..........................................................25100.10100010
............................................................................................................................................................................................................................................GTCAG-TA----AAGCTTTGGCCGTGTGG...........................................................24100.10101000
...............................................................................................................................................TTCCATGA------------------AGCACAGTAATTGGC............................................................................................................................................23100.10100010
..................................................................................................................................................................................................................................................TA----AAGCTTTGGCCGTGTGG...........................................................19100.10100001
...................................................................................................................................................................................................................................................A----AAGCTTTGGCCGTGTGGTTCAGAT....................................................25100.10100010
...........................................................................................................................................AGCATTCCATGA------------------AGCACAGTAATTG..............................................................................................................................................25100.10101000
..................................................................................................................................................................................................................................................TA----AAGCTTTGGCCGTGTGGTTCAGAA....................................................26100.10100010
.............................................................................................................................................................................................................................................TCAG-TA----AAGCTTTGGCCGTGTGG...........................................................23100.10101000
........TTGCA------CCTAAGTCGCTCAATGAATC.............................................................................................................................................................................................................................................................................................25100.10101000
........TTGCA------CCTAAGTCGCTCAATGAATCGGT..........................................................................................................................................................................................................................................................................................28100.10101000
......CTTTGCA------CCTAAGTCGCTCAATG.................................................................................................................................................................................................................................................................................................23100.10101000
...CACCTTTGCA------CCTAAGTCGCTCAAT..................................................................................................................................................................................................................................................................................................25100.10101000
...........................................................................................................................................................................................................................................................................CAGATAGTGGCCATTCCGAT-TGTG................................24120.08101000
....................................................................................................................................................................................................................................................................TGTGGTTCAGATAGTGGCCATTCCGAT-....................................27120.08101000
.....................TAAGTCGCTCAATGAATCGGTAACAGT....................................................................................................................................................................................................................................................................................27120.08100010
..............................CAATGAATCGGTAACAGTAGCTGGTT............................................................................................................................................................................................................................................................................26120.08100010
...........................GCTCAATGAATCGGTAACAGTAGCTGG..............................................................................................................................................................................................................................................................................27120.08101000
...........................................................................................................................................................................................................................................................................CAGATAGTGGCCATTCCGAT-TGTGGTT.............................27120.08100010
...............................................................................................................................................................................................................................................................................TAGTGGCCATTCCGAT-TGTGGTT.............................23120.08101000
.....................................................................................................................................................................................................................................................................GTGGTTCAGATAGTGGCCATTCCGAT-....................................26120.08101000
.............................TCAATGAATCGGTAACAGTAGCTGGTT............................................................................................................................................................................................................................................................................27120.08101000
....................................................................................................................................................................................................................................................................TGTGGTTCAGATAGTGGCCATTCCGA......................................26120.08100010
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-TGTTA...............................27120.08101000
.................................TGAATCGGTAACAGTAGCTGGTTAC..........................................................................................................................................................................................................................................................................25120.08101000
..................................GAATCGGTAACAGTAGCTGGTTACC.........................................................................................................................................................................................................................................................................25120.08101000
...........................................................................................................................................................................................................................................................................CAGATAGTGGCCATTCCGAT-TGTGG...............................25120.08101000
.........................................................................................................................................................................................................................................................................TTCAGATAGTGGCCATTCCGAT-T...................................23120.08101000
..............................CAATGAATCGGTAACAGTAGCTGGT.............................................................................................................................................................................................................................................................................25120.08100010
..............................................................................................................................................................................................................................................................................ATAGTGGCCATTCCGAT-TGTG................................21120.08100010
...............................AATGAATCGGTAACAGTAGCTGGT.............................................................................................................................................................................................................................................................................24130.08101000
droMoj3
TGAGT-TTCTTGA------TCGGACGCGATGTACAAAGCGCCGGACGAATGCGATGATTCGAATCAGTCGCAGCCATGATGATAC---------TCTAATAAGTAAAGCATCAAAGGGGGACGATGCCATGT-CCTCCGTTGC-CGTCAGA------------------AT---ATT--------GGCCTTAAATTCCG------------------CTTCTGCTGCTGGCGGCACGATAGATCAGCAGAATTTTGATC------GTCGAAGCATCTCCAAACACTCCTGGGAATCATGTAGCCAGGACGGTTCCTTCCACCATSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..........................................................TCGAATCAGTCGCAGCCATGATGATA................................................................................................................................................................................................................................................26130.152200000
.............................................................................................................................................................................................................................................................TTGATC------GTCGAAGCATCTCCAAACAC.......................................26100.101100000
...................................................................................................................................................................................................................................................................................CTCCAAACACTCCTGGGAATCA...........................22100.101100000
..........................................................TCGAATCAGTCGCAGCCATGATGATAC---------TC....................................................................................................................................................................................................................................29130.081100000
......................GACGCGATGTACAAAGCGCCGGACG.....................................................................................................................................................................................................................................................................................25140.071100000
........................................................................................................AAAGCATCAAAGGGGGAC..........................................................................................................................................................................................................18140.071100000
TGAGT-TTCTTGA------TCGGACGCGATG.....................................................................................................................................................................................................................................................................................................24140.071100000
.........................................................TTCGAATCAGTCGCAGCCATGATGA..................................................................................................................................................................................................................................................25150.071100000
......................................................TGATTCGAATCAGTCGCAGCCATGATA...................................................................................................................................................................................................................................................27150.071100000
...................................................CGATGATTCGAATCAGTCGCA............................................................................................................................................................................................................................................................21150.071000010
....................................................GATGATTCGAATCAGTCGCAGCCATGAT....................................................................................................................................................................................................................................................28150.071100000
.........................................................TTCGAATCAGTCGCAGCCATGATG...................................................................................................................................................................................................................................................24150.071000001
........CTTGA------TCGGACGCGATGTACAAAGCG............................................................................................................................................................................................................................................................................................26160.061000001
droAna3
ATTGGTTCCGGCC------TCGGATTTGGTTAATAAATCGATAGCAGTAGCTTGCTATTCGAAGGAGGCGGGTCCACGGTGAAAT---------CTTCCTACTCAGCAACTCCTCC----------ATACTT-TCATCCGGAAAGCTATGT------------------AG---AGTTGTGGGCT--------TTGACAGTCGTTCCTCGGTGCT----ACATT---TCTCA--GGAACAGAT--------------A-------GATTGAAAGTGGCCACTCAAGT-TGAGGGTTGGTCAACCATGGGGGTCCGTTCCATCA-SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
GTCGATTCCTCTC------ACGAAGACGATGAACGAAGCGAAGGCAGTAGCTGACTATCCTTAATAAACGGGACCATGAGGAGGA---------TTTGTTGATCATACAAGATAGC----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTTCGTTTCAGCCTTCATCTCTAGGCAGGCCTCTTCTTCTGTCGACAGAACAAACT----------TAGC-------TTTAACAGGTGGCCAAGCTGAA-CGTGACTGAGATAGCCAAGGTGGTCCATTCCACCATSizeHit CountTotal NormTotal
No Reads
droKik1
GTGGAGTCCTTCC------ACGAAAACGATGGACGAAGCGAAAGCAGTAGCTGAGTATCCTCATTAAGCGAGACCATGAGGAGAT---------TTTGTTGATCATACAGTTGAGC----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTTGGGTTCGGCCTTTACCTCCAAGCATGCCTCTTCTTCTGTCGACAAAGCAAACT----------TAGC-------CTTAGCGGGTGGCCAAGCTGAA-CGTGACTGAGATAGCCAAGCGGGTCCATTCCACCAGSizeHit CountTotal NormTotal
No Reads
droFic1
GATGGCCATTGGA------AAGTAGAGGC----------------TTGGACCTGCAATTCGAAATAAATCGATACACGTACGCAAATACACGCTGCAACTTATCAAACGTGTTAAG----------GAATTTGCAGTTAACAGAAATGTCAACGCACACGGTTCCAATTAG---AGTCGCGG------------------------------------AACGACGCTCTGCAAGATCCTTTACT----------ACAT-------CAAGCAGGGAGGCCATTCCGAT-GAGTTCTGCAAAAGAAATGGAGGTCCATTAGCCCAASizeHit CountTotal NormTotal
No Reads
droEle1
ATAGA--------------------------------------------------------CAGTAAATGAGACCATGCTGAAGT---------TCTAGTGATCATACAAGACAGA----------ATATTT-CCCTCATTGGAAATGCGC------------------AG---AGT--------AACGTTCGGCTGAAATATAACTTCTTTGCACTCATCCTCTTTCGTCGGTACCGAAAACT----------TAGC-------TTCTCTAGGTGGGCAAGTTGAG-CGTGACTGGGATAGCCAAGATGGTCCATTCCACCGGSizeHit CountTotal NormTotal
No Reads
droRho1
GTTGATTTCTCCC------ACGAATACGATGAACGAGACGAAAGCTGTAGCTGAGTATCGTCAACAAACGAGACCATGAAGAGGT---------TTTGTTGATCATACGGGTTAGT----------GAATTT-CCGTCGGCGGGAATGTGT------------------AG---ATT--------AACCTTTGGTTCGGACTTTAAGTCCAGGCATGCTTCTTCTTCTGTCGACAGAATAAACT----------TAGC-------CTTAACGGGTGGCCAAGTTGAG-CGTGACTGAGATAGCCAAGCTGGTCCATTCCACCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTCGATTCCTCTC------ACGAAGACGATGAACGAAGCGAAGGCAGTAGCTGACTATCCTTAATAAACGGGACCATGAGGAGGA---------TTTGTTGATCATACAAGATAGC----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTTCGTTTCAGCCTTCATCTCTAGGCAGGCCTCTCCTTCTGTCGACAGAACAAACT----------TAGC-------TTTAACAGGTGGCCAAGCTGAA-CGTGACTGAGATAGCCAAGGTGGTCCATTCCACCATSizeHit CountTotal NormTotal
No Reads
droTak1
GTTGGTTTCTCCC------ACGAAGACGATGCACAAAACGAAAGCAGTAGCTGAGTATCCTCACCAAACGAGACCATGAAGAGGT---------TTTGTTGATCAGACAGGTTAGA----------GAATTT-CCGTCGTCGGAAATGTGT------------------AG---GTT--------AACCTTAGGATCGGCTTTTACCTCCAGGGATGCCTCTTCTTCTGTCGACAGAACAAACT----------TAGC-------CTTAACGGGTGGCCAAGTTGTG-CGTGACTGAAATAGTCAAGCTGGTCCATTCCACCAASizeHit CountTotal NormTotal
No Reads
droEug1
GTTGATTCCTCCC------ACGAAGGCGATGAACGAAACGAAAGCAGAAGCTGAGTATCCTCAACAAACGAGACCAGGAGGAGGT---------TTTGTTAATCATTCAAGTTAGT----------AAATTT-CCGTCGTCGGAAATGTGT------------------AG---ATT--------AACTTAGGATCGGTTTTTTTTATCCAGGTATGCCTCTTCTTCTGTCGATAGAACAAACT----------TAGC-------CTTCACGGGTGGCCAAGTTGAG-CGTGACTGAGATAGCCAAGCTGGTCCTTTCCACCAGSizeHit CountTotal NormTotal
No Reads
dm3
AA---TTCCTATGATGAGATCGAAGAGTGTGAATAAAGCGATGACAGTAGCTAGATACCCTTATAAGACGTGTCCAGGTTGAGAA---------TTTGTGGATGAGTAACTCGTGT----------ATACTT-TCATCAGGAAAGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGTTCCTCGGTGTTGACATCGAAACTTGAAGATACGCTGAACT----------TGCT-------TGTAGAAGGTGGCCACTCAGAG-GTGGGTGTGGCCAGCCAGGACGGACCTTTCCACCACSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGT........................................................2412463.005556000000000000000000000917210000000000001711606128170341728023412504360002426800000000000000000000000000100000000020000000000000000000000000000000003040232900115627424748528245706410327282370000000000000000000000000000000010661512911481162171561401345171313601000285283962241143284717200000000510600000000600000000000000000000003000000000000000403040226118060137022121026825026000000000000000101191186177000000
....................................................................................................GATGAGTAACTCGTGT----------ATACT.................................................................................................................................................................................................2111353.27388600000000000000000000000000340000000000010000002010100038000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000554265919170200000000000003626534530001030000100000050003000536236000005110001010000000030011160002060100707111005011104293300010003137730200001000311200010061516400461014182617769261020101321398492651100
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTA.......................................................2512185.58222700000000000000000000024100000000000100202210210002104100022200000000000000000000000000000000000000000000000020001000000000000000006070931009048432936714171012000000000000001000000000000000000418070000013771519114000200000320230284344621434243345700000000300000000000000000000000000000000000000000000000000100101411360100002011180000000000000099914000000
........................................................................................................................................TCAGGAAAGTTATGT------------------AG---AGTC..................................................................................................................................................2111154.3616980000000000000000000000000013000000000000000000100000000044000000000000000000000000000000020000000000000000202000000000000000000000000000000000000000000020001010150140940000000000000000000610297000000000000010350000100031221900200100000102316000000080030100050005000503000007001302000000027130000000000010020102003392301152544700252311000010105211616290
..............................................................................................................................................AAGTTATGT------------------AG---AGTCGTGGGC............................................................................................................................................2115147.87221800000000000000000000000100700000000000002001010000000112210000000000000000000000000000000000000000000000004120000000000000000000000000001000000200000000010002000027614609000000000000000731800126001120100100301022100000022381834040001000011937190000001200503000001132709005300200906355100000001153020000000010200200020018625212567796334048381010112125866042630
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTAGA.....................................................2712128.33154000000000000000000000004100000000000000001100000000001000061040000000000000000000000000000000000000000000000000000000000000000000000140604601004602604221510112830000000000000000000000000000000000040600000106001905000100000140072883853129221229950000000002010000000000000000000000000000000000000000000000040000009330000001738000000000000001635000000
................................................................................................TGTGGATGAGTAACTCGTGT----------A.....................................................................................................................................................................................................2111124.5513700000000000000000000000000022000000001000000000000000000220000000000000000000000000000000050000000000000000364000000010000000000000000000000000000000000000000100635260426540000000000000000721025400000000000012102023001001926260111020001011331000000200403000101010002110000010102010000002377000000000000002020000904100143479201142915000001215231618390
..............................................................................................TTTGTGGATGAGTAACTCGTGT----------ATAC..................................................................................................................................................................................................2611117.2712900000000000000000000000000000000000000000001000000010100000000000000000000000000000000000000000000000000000000000000000000000000000100004000500000000000014000000000000000000001000000000000000000000022102191681782690001000000010013822504742361000000000000000000000000000000000000000000000000000000000001000002225000000658000000000000000000000000
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTAG......................................................2612115.2513830000000000000000000000200000010000000020400040301320100003320000000000000000000000000000000000001000000000000000000000000000000000607080000151271452468602810110000000000000000000001000000000001021500003131972240001400001001182082111102101642276000000001101000000000000000000000000000000000200000000000005000006151216020000222430000000000000009191615010000
....................................................................................A---------TTTGTGGATGAGTAACTCGT..................................................................................................................................................................................................................2111107.9111870000000000000000000001010021000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110120270220000000000000000940100000000000000633345000600016178412321233000651842400000060010100040005020231000022002320000000107352030000000010010002001046010120421611171911000021013203418250
................................................................................................................................................................................................................................................AACT----------TGCT-------TGTAGAAGGTGGC..............................................2112105.17126200000000000000000000000000500000000000100000010100000000000000000000000000000100100000000000000000000000123000000010000000000000000000000000000001000000000001002725011511000000000000000101110190000010000000000002000000710202000200000022426153450000004200613000202140201400000040129000000000217140010000100010000001001051310060720017700000001012466170
..............................................................................TTGAGAA---------TTTGTGGATGAGTAACTC....................................................................................................................................................................................................................2511103.5511390000000000000000000000020000000000000000050000002030400006100000000000000000000000203040000000001000000000000000000100000000000000800022000032180164651750356900000000000000000000000000000000180707001062210639420010000001114070227001531951225000000000000000000000000000000000000000000010000000000000000000028250000000029435200000000000000781015000000
......................................................................................................................................................T------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................2115102.131532000000000000000000000000001200000000010223101020000200000000000000000000000000010000000021000000000000000693000000000000000000000005010400024232012010010204201002171082170000000000000004166347000002100105000000150720091014023602000216815522070000002300900100301290203910120050214320000000110260100000100000040300001745551014129560119261000101421012182814290
.............................TGAATAAAGCGATGACAGTAGCTAGA.............................................................................................................................................................................................................................................................................261192.9110220000002000000000000000200000000000001010210020117020100000272110000000000000000000000100010000000002000000000010000000000000000000000401033000605127510201625177201926220000000000000000000000000000000015114023020001000145040613000042211001408224425321000000001301000000000000000000000000000000000000010000000001200100518921010000334495000000000000002343000008
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TG.........................................................231288.7510650000000000000000000001150000000000000050300016206240000002530000000000000000000000000030000000001000000000001000300000000000000000602030010031074647715697021382300000000000000000000000000000000190804025020200511500000000044019987039559612884100000000250000000000000000000000000000000000000000000000000300100821550300002513170000000000000071145000000
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTAGAA....................................................281282.179860000000000000000000001100000000000000000100010003010200002019500000000000000000000002000000000000000000000000000000000000000000000004040181000300100010012100000000000000000000001000000000000000103001041200000000000000400520326333267182983000000000000000000000000000000000000000000000000000000000000000004265000000101000000000000000011000000
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTA................................................................................................................................211580.20120300000000000000000000000000160000000001000100001000000120000000000000000000000000000000000000000000000000000560000000000000000000000000000000001100011000000000040157112290000000000000000730414100101000000000001310012000727130322100000000003000000091050010010104010011000003022410000000004370000000000000020000001843240913804122830001010100010222510500
..............................................................................TTGAGAA---------TTTGTGGATGAGTAACT.....................................................................................................................................................................................................................241177.098480000000000000000000000010000000000000000210000001010100009910000000000000000000000200020000000000000000000000000000000000000000000000000000205912167125167012118000000000000000000000000000000002111901600501211101645000100000906433720372671227530000000002000000000010000000000000000000000000000100000000000000271700000000111921002000000000006262631000000
..............................................................................................................................................................................................................................................TGAACT----------TGCT-------TGTAGAAGGTG................................................211274.838980000000000000100000000010012000000000000000021000000001000000000000000000000000001000000200000000000000001732000000000000000000000000000000000000000000000000102038301523000000000000000152213115000000000000001000100000030123100101110283131531300000022001100000000800013100000000002000000000340000000000010000000002610000016000100000000000113160
..................................................................................................TGGATGAGTAACTCGTGT----------ATACTT-T..............................................................................................................................................................................................251165.0971600000000000000000000000000000000000000001000100030001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000131268763125190000000000000010254702791120000000000000000000000000000000000000000000000000000000000000000000020000001222000000000000000001000000
.............................................................................GTTGAGAA---------TTTGTGGATGAGT.........................................................................................................................................................................................................................211164.64711000000000000000000000000007100000000000000000000000000000000000000000000000000000000000200000000000000003140030000000000000000000000000000000000010002100000110016511146100000000000000045301500000000000000000000030005628100000021100012402830000004002000000100202034000100301012100000001331100000000001000000100100410080149012711110000000071356210
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------T..........................................................221263.0075600000000000000000000022000000100000000103000240010104000022200000000000000000000000000000000000010000000000000000000000000000000001020201001411418133541441220000001001000000000000100001204030091601300130212162221442600000005027035894722135464205060200002301000000000000000020000000000200000000100000000001000005120300002011441013000100000008932011110
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................231561.47922000000000000000000000002000000000000501022101000004020130000010000000000000000000000010001000000000300000000000100100000000000000000010001700008131419667402826263763000000000000000000000000002000000180406002024000212150012000001202526800300100000000001302000000003000000000000000000000000000000000000000000021834470000001443450030001000000015211018000100
............................................................................................................................................GAAAGTTATGT------------------AG---AGTCGTGG..............................................................................................................................................211555.808370000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000001540000000000000000000000000000000100000000000000012200502100110000000000000072001700000000000000000000010002419130010020000001120348000000300001000101000000200020020000000001000042010000000000000000000013313102228270316232400001000718890
................................................................................................TGTGGATGAGTAACTCGTGT----------ATAC..................................................................................................................................................................................................241155.646120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000001021216110220400000000000000101307310000000000000000000000000000000000000000000000000000000000000000000010000000110001000000000000000000000
...............................................................................................................................................................................................................................................GAACT----------TGCT-------TGTAGAAGGTGG...............................................211252.3362800000000000000000000000000100000000000000000000000000000000000000000000000000000000000020000000000000000471000000000000000000000000000000000000010000001000000010132407311000000000000000674100600000200000000000006000005300001000000006109379000000700100000000140000610020130122200000000155100000000000000000100167210020210005100000000001434120
..............................................................................TTGAGAA---------TTTGTGGATGAGTAACTCG...................................................................................................................................................................................................................261151.735690000000000000000000000020000000000000000020000002010110002230000000000000000000000005010000000000000000000000000000000000000000000400026010050111066259301344000000000000000000000000000000000004020010500000280003240002002521126152815610000000000000000000000000000000000000000000000000000000000000000182100000000242465000000000000002743000000
...........................................................................................................................................................................................................................TCGAAACTTGAAGATACGCTGAACT----------......................................................................251251.33616000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010010301000010000000000000000000000000000000000000000000000122586866186000002000000000131602528290000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010100000
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCT...........................................................................................................................241549.60744000000000000000000000002000000000000000016100001010009000031000000000000000000000000000000000000010000000000000000000000000000000001000000001912174022283119284045000000000000000000001000000000000030102200503901001019310400000518227003001000000000032000000000000000000000000000000000000000000000000000000032017000000320240000000000000016332725000004
..............................................................................................TTTGTGGATGAGTAACTCGTGT----------ATACT.................................................................................................................................................................................................271148.7353600000000000000000000010000000000000010004200405021106000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032270050701510140000000000000000000000000000000000180340202896501407311012550004023814050881500000000000000000000000000000000000000000000000000000000000040000135313010000501247000000000000006212332600000
......................................................................................................................................................................................................................................AGATACGCTGAACT----------TGCT-------TGT........................................................211245.585470000000000000000000000000010000000000000000000000001000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000100000000150300110000000000000020017000000000000000000000500023602000100000001564000000200702000304010000200020040113510100000034100000000001000000000286700013041000130100000000281611310
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATG..............................................................................................................................211545.1367700000000000000000000000200101000000002100730002004010310000000000000000000000000000000000000000000000000012400000000000000000000000100000000089802496881320120013250017100000000000000028065310030203001013010102600100015420191530000000013310000019002010000001100002000001100131100000002040000000000000813570100556412140049000320000006636302370
...............................................................................................................................................AGTTATGT------------------AG---AGTCGTGGGCT--------...................................................................................................................................211544.7367100000000000000000000000000100000000000000000010000000006600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083124701801000000000000000080004300000000000000001110000004460000000100000120000000200000000001020100000000020001010000000012400000000000200010000038820081209202261512000000004141013130
.............................................................................................................................................AAAGTTATGT------------------AG---AGTCGTGGG.............................................................................................................................................211542.80642000000000000000000000100001000000000000011000100010000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001111260015000000000000000002820014000000010000000001010000026231603010000000033840300000050050000000002000130011001000111000100003111000000100000000100003732017121540216191200001001371216170
.............................................................................................................................................................................................................................................CTGAACT----------TGCT-------TGTAGAAGGT.................................................211241.334960000000000000000000000000030000000000000000000000000000000000000000000000000000000000000100000000000000003300000000000000000000000000000000000000000000000020619216067700000000000000001260017000000000000846492000100060400002107000496769800000014000000000020200002000100000150000000000181000000000020000000002832003073000700000000000155360
................................................................................................TGTGGATGAGTAACTCGTGT----------ATACTT-T..............................................................................................................................................................................................271138.824270000000000000000000000000000000000000000000000000200110000000000000000000000000000200000000000000000000000000000000000000000000000000001000000100010000021000000000000000000000000000000000000300000012843817171020200140400000051505217222010000000000000000000000000000000000000000000000000000000000000000000280000001549000000000000000240000000
..........................GTGTGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................251138.184200000000000000000000000380000000000000000102020200500000000000000000000000000000000000000000000011000000000000000000000000000000000000001100100500200140000000000000000000000001000000000000000108000000000019001100000000132216105120000000000000000000000000000000000000000000000000000000000000000003295100200001171814000000000000000334000000
.......................................................TACCCTTATAAGACGTGTCCAGG......................................................................................................................................................................................................................................................23138.00380000000000000000000000000000000000000000110000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000002200106000000000000000000000000000000000010000000000000000000200000000500000000000000000000000000000000000000000000000000000000000000000000000000411000000231000000000000000110000000
..................................................................................................................................................................................................................................TTGAAGATACGCTGAACT----------TGC...................................................................211237.67452000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000011000002001024030000000000000000000711000000000000200000000000010000000001000212131138120000003003000001000000011100100400241100000001220010000000000000000004740101029001510000000000022220
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...................................................................................AA---------TTTGTGGATGAGTAACTC....................................................................................................................................................................................................................20113.36370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000005000000000000000000010000000000000000000000000000000000000005147600000000000000100000000000000000000000000000000000010000000000010000000000000000000000000000000020000002000000000000000000000
...............................AATAAAGCGATGACAGTAGCT................................................................................................................................................................................................................................................................................21113.363700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000001000000000000000000000000003020000000000001020000000000100000000010000000000001001000000001100000000000000000000000211000105000000000000000000000
..............................................................................TTGAGAA---------TTTGTGGATGAGTAA.......................................................................................................................................................................................................................22113.36370000000000000000000000000000000000000000110000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000100001000110000100000000100000000000000000010010000000000000000021000000000000201104100000000000000000000000000000000000000000000010000010000000000000000100000000011003000010000001003000000
.............................TGAATAAAGCGATGACAGTAGCT................................................................................................................................................................................................................................................................................23113.363700000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000002100101000000000000000000000000000000000000000000000000000010000000004002001034120000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000001000000
..........................GTGTGAATAAAGCGATGACAGT....................................................................................................................................................................................................................................................................................22113.36370000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001001000100001041200010000000000000000000000000000000000000010000000000001000000000000002500000010252001000000000000000110000
..............................................................................................TTTGTGGATGAGTAACT.....................................................................................................................................................................................................................17113.273600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGGTTGAGAA---------TTTGTGGATGAG..........................................................................................................................................................................................................................22113.27360000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000100100001055100000010000000000000010011000000000000000000000300000000000000000000030000004000000000000000000010
.............................................................................................................................................................................................................................................................................GAAGGTGGCCACTCAGAG-GT..................................20153.27490000000000000000000000000000000000000000000000000000210000000000000000000000000000100400000000001010000002200000100100000000000000000000000000100011003210100000200000000000000000000000020000100000000000000000000000200100102100010000000010000000000000000000000000000000000000000000000000000000001000010301003000000000000000000000
..............................................................................................................................................................................................................................................TGAACT----------TGCT-------TGTAGAAGGTGGCCAC...........................................26123.25390000000100000000000000100000000000000000000000000000000000100000000000000000000000000050000000000000000000000000000000000000000000000005000000000001100000000000000000000000000000000000000000000000000000100000040000001120103420000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000120000000
..............................................................................................................................................................................................................................................TGAACT----------TGCT-------TGTAGAAGG..................................................19123.25390000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000102200000000000000100010000175000000000000100000000000110000000000100000000000400000000000000000000020000105000000000000000000020
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------T.....................................................................18123.25390000000000000000000000000000000000000000010000001000000001000000000000000000010000000000000000000000000000000000000000000000000000003100000000120120000000000000000000000000000000000000000030000000004220500000000000002300100000000000000000000000000000000000000000000000000000000000000000000001100000000001000000000000000000000000
....................................................................................................................................................................................................................GTTGACATCGAAACTTGAAGATACGCT.....................................................................................27123.253900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000097281000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGAAGAGTGTGAATAAAGCGATGACA......................................................................................................................................................................................................................................................................................27123.25390000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000004010102004020000000020402801000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000201100000
...................................................................................................................................................................................................................................................T----------TGCT-------TGTAGAAGGTGGCC.............................................19153.20480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000100000000000047120000000000000000030000000000000000000000002000011000000000001120000000020001000000000000000000100000000000000000500000000000000000000010000005001100000000000000020
..................................................................................GAA---------TTTGTGGATGAGTAACTCGTGT----------......................................................................................................................................................................................................25113.183500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000054071200000005000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GAAACTTGAAGATACGCTGAAC.................................................................................22123.1738000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812100600000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TAACTCGTGT----------ATACTT-TCATC..........................................................................................................................................................................................21143.1444000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001270000000100000000000000000000000000001010000000000000000000000000000000721000010000000000001000000000
........................................................................TCCAGGTTGAGAA---------TTTGTGGATGAGTA........................................................................................................................................................................................................................27103.10310000000000000000000000000000000000000000001000000000100000000000000000000000000000000500000000000000000000000000000000000000000000000000000000206000000000100000000000000000000000000000000000000000000000001010000000000000103410000000001000000000000000000000000000000000000000000000000000000000100000000001000000000000000010000000
........................................................................................................................................TCAGGAAAGTTATGT------------------AG---AGT...................................................................................................................................................20113.093400000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010600000000000000000001000010000000000000310000000000022000000000000020000000000000000000001000000000000000000000000001000000000000000000000020000001000000000000000000000
droSim2
AA---TTCCTTTGTTGCAATCGAAGAGTGTGAATGAAGCGATAACAATAACTAGATATCCTTATAAGACGCGTCCAGGTTGAGTA---------TTTGTGTACGAGTAACTCGTTG----------ATACTT-TCGCCAGGAAAGTTATGT------------------AG---AGTTGTGGGCT--------TTACTGTTCGATCCTACGTGTTGACATCGAAACTTGGAGATAC------------------------------------GTTGGCCACTC--------GGTGTAGCCGGCCAAGACGGTCCTTTCCACCACSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................................................TTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................19513.00650000903048013100000
...................................................TAGATATCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................2815.00500000031100000000
............................................................TTATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................1854.2021000018010002000000
.............................................................TATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................1853.8019000000112105000000
...............................................................................................................................................................................................................................AACTTGGAGATAC------------------------------------GTTGGCCACTC--------G................................2532.67801106000000000000
..............................................................................................................................................................................................................................AAACTTGGAGATAC------------------------------------GTTGGCCACTC--------.................................2532.67800000000008000000
...............................................................................TGAGTA---------TTTGTGTACGAGTAACT.....................................................................................................................................................................................................................2312.00200000000002000000
..................................................................................................................................................................................................TACTGTTCGATCCTACGTGTTGACATC.......................................................................................................2712.00200200000000000000
...............................................................................................................................................................................................................TACGTGTTGACATCGAAACTTGGAGA...........................................................................................2612.00200000000200000000
...................................................................................................................................................................................................................................TGGAGATAC------------------------------------GTTGGCCACTC--------GGTGTA...........................2632.00600000020103000000
............................................................TTATAAGACGCGTCCAGGTTGAG.................................................................................................................................................................................................................................................2352.001000109000000000000
.................................................................................................................................................................................TGTGGGCT--------TTACTGTTCGATCCTACG.................................................................................................................2612.00200000000002000000
..............................................................ATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................1751.80900000020007000000
...................................................................................................................................................................................................................................TGGAGATAC------------------------------------GTTGGCCACTC--------GGTG.............................2431.67500000010103000000
..............................................................................................TTTGTGTACGAGTAACTCGTTG----------ATACT.................................................................................................................................................................................................2721.50300300000000000000
................................................................AAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................1551.40700000022003000000
...................................................................................................................................................................................................................................TGGAGATAC------------------------------------GTTGGCCACTC--------GGT..............................2331.33400003000001000000
...............................................................................................................................................................................................................................AACTTGGAGATAC------------------------------------GTTGGCCACTC--------GG...............................2631.33401200000000100000
...................................................................................................................................................................................................................................TGGAGATAC------------------------------------GTTGGCCACTC--------GG...............................2231.33400003000001000000
...............................................................................................................................................................................................................................AACTTGGAGATAC------------------------------------GTTGGCCACTC--------.................................2431.33401300000000000000
...............................................................TAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................1651.20600000010005000000
............................................................TTATAAGACGCGTCCAGGTTGAGTA---------T.....................................................................................................................................................................................................................................2611.00100000100000000000
......TCCTTTGTTGCAATCGAAGAGTGTGAA...................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.................................................ACTAGATATCCTTATAAG.................................................................................................................................................................................................................................................................1821.00200002000000000000
..................................................................................................................................................TATGT------------------AG---AGTTGTGGGCT--------TTACT..............................................................................................................................2311.00100100000000000000
....................................................................................................................................................TGT------------------AG---AGTTGTGGGCT--------...................................................................................................................................1611.00100000000001000000
..................................................................................................................................................TATGT------------------AG---AGTTGTGGGCT--------TTA................................................................................................................................2111.00100000000001000000
...................................................................................................................................................................................................................................TGGAGATAC------------------------------------GTTGGCCACTC--------.................................2031.00300003000000000000
..............................................................................................................................................................................................................................AAACTTGGAGATAC------------------------------------GTTGGCCACTC--------G................................2631.00300000000003000000
...................................................TAGATATCCTTATAAGACG..............................................................................................................................................................................................................................................................1931.00300003000000000000
..............................................................................................................................................................................................................CTACGTGTTGACATCGAAACTT................................................................................................2211.00100000000001000000
.......................................................TATCCTTATAAGACGCGTCCAGGTT....................................................................................................................................................................................................................................................2511.00100000000010000000
........................................................................................................................................................................................................TCGATCCTACGTGTTGACATCGAAAC..................................................................................................2611.00100000000001000000
.......................................................................................................................................................................................................TTCGATCCTACGTGTTGACATC.......................................................................................................2211.00100000000001000000
............................................................TTATAAGACGCGTCCAGGTTGAGT................................................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................................................................TATGT------------------AG---AGTTGTGGGCT--------TTACTGT............................................................................................................................2511.00100000000001000000
..................................................................................................................................................TATGT------------------AG---AGTTGTGGGCT--------...................................................................................................................................1811.00100000000001000000
...............................................................................................................................................................................................................................AACTTGGAGATAC------------------------------------GTTGG...............................................1831.00300003000000000000
...............................................................................................................................................AGTTATGT------------------AG---AGTTGTGGGCT--------TTA................................................................................................................................2411.00100000000001000000
...............................................................................................................................................................................................................................AACTTGGAGATAC------------------------------------GTTGGCCACT..........................................2331.00302100000000000000
.......................................................TATCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................2411.00100000010000000000
..........................................................................................................TAACTCGTTG----------ATACTT-TCGCCAGGA......................................................................................................................................................................................2521.00200000000200000000
........................................................................................................................................................................................................TCGATCCTACGTGTTGACATCG......................................................................................................2211.00100000000001000000
...........................................................CTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................2041.00400000000004000000
...............................................................................................................................................................................................................TACGTGTTGACATCGAAACT.................................................................................................2011.00100000000100000000
...............................................................................................................................................................................................................TACGTGTTGACATCGAAA...................................................................................................1811.00100000000001000000
..............................................................................................................................................................................................................................AAACTTGGAGATAC------------------------------------GTTGGCCACTC--------GG...............................2730.67200010000001000000
...............................................................TAAGACGCGTCCAGGTT....................................................................................................................................................................................................................................................1750.60300000000003000000
................................................................................................TGTGTACGAGTAACTCGTTG----------ATACTT-T..............................................................................................................................................................................................2720.50100010000000000000
..................................................................................................................................................................................................................................................................................TGGCCACTC--------GGTGTAGCCGGCCAA..................2420.50100000000001000000
...............................................................................................................................TACTT-TCGCCAGGAAAGT..................................................................................................................................................................................1820.50100000000001000000
...................................................TAGATATCCTTATAAGACGCGTC..........................................................................................................................................................................................................................................................2320.50100000000001000000
.............................................................TATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................1750.40200000000002000000
............................................................TTATAAGACGCGTCCAG.......................................................................................................................................................................................................................................................1750.40200000000002000000
..............................................................................................................................................................................................................................AAACTTGGAGATAC------------------------------------GTTGGCCAC...........................................2330.33100000000001000000
..................................................................................................................................................................................................................................TTGGAGATAC------------------------------------GTTGGCCACTC--------GGTGTA...........................2730.33100000000001000000
..............................................................................................................................................................................................................................AAACTTGGAGATAC------------------------------------GTTGGCCACT..........................................2430.33100000000001000000
................................................................................................................................................................................................................................ACTTGGAGATAC------------------------------------GTTGGCCACTC--------GG...............................2530.33100010000000000000
...................................................................................................................................................................................................................TGTTGACATCGAAACT.................................................................................................1630.33100000010000000000
...................................................................................................................................................................................................................................TGGAGATAC------------------------------------GTTGGCCACTC--------GGTT.............................2430.33100000000100000000
..................................................................................................................................................................................................................GTGTTGACATCGAAACT.................................................................................................1730.33100000000001000000
...............................................................................................................................................................................................................................AACTTGGAGATAC------------------------------------GTTGGCCACTC--------GT...............................2630.33101000000000000000
..........................................................CCTTATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................2040.25100000000001000000
...........................................................CTTATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................1940.25100000000001000000
..........................................................CCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................2140.25100000000100000000
....................................................................................................................................................................................................................GTTGACATCGAAACTTG...............................................................................................1740.25100000000001000000
..............................................................................................................................................................................................................................AAACTTGGAGATAC------------------------------------G...................................................1540.25100000000001000000
..........................................................CCTTATAAGACGCGTCCAGGTTGAG.................................................................................................................................................................................................................................................2540.25100000000100000000
.............................................................TATAAGACGCGTCCAGGTT....................................................................................................................................................................................................................................................1950.20100000000010000000
............................................................TTATAAGACGCGTCCAGGTTT...................................................................................................................................................................................................................................................2150.20100000010000000000
.............................................................TATAAGACGCGTCCAGGTTGAG.................................................................................................................................................................................................................................................2250.20100000001000000000
............................................................TTATAAGACGCGTCCAGGTTG...................................................................................................................................................................................................................................................2150.20100000000001000000
.............................................................TATAAGACGCGTCCAGGA.....................................................................................................................................................................................................................................................1850.20100000000100000000
.............................................................TATAAGACGCGTCCAG.......................................................................................................................................................................................................................................................1650.20100000000001000000
............................................................TTATAAGACGCGTCCAGGAA....................................................................................................................................................................................................................................................2050.20100000000000010000
...............................................................TAAGACGCGTCCAGGTTGAG.................................................................................................................................................................................................................................................2050.20100000000001000000
...................TCGAAGAGTGTGAAT..................................................................................................................................................................................................................................................................................................1550.20100000000001000000
..............................................................ATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................1660.17100000000001000000
..............................................................ATAAGACGCGTCCAG.......................................................................................................................................................................................................................................................1560.17100000000001000000
...............................................................TAAGACGCGTCCAGT......................................................................................................................................................................................................................................................1590.11100000000001000000
droSec2
AA---TTCCTATGATGGGATCGAAGAGTGTGAATAAAGCGATGACAGTAGCTAGATACCCTTATAAGACGCGTCCAGGTTGAGAA---------TTTGTGGATGAGTAACTCGTGT----------ATACTT-TCATCAGGAAAGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGTTCTTCGGTGTTGACATCGAAACTTGAAGATACGCTGAACT----------TGCT-------TGTAGAAGGTGGCCACTCAGAG-GTGGGTGGGGCCAGCCAGGACGGACCTTTCCACCACSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
............................GTGAATAAAGCGATGACAGTAGCTAGA.............................................................................................................................................................................................................................................................................27204.8597660283
............................GTGAATAAAGCGATGACAGTAGCT................................................................................................................................................................................................................................................................................24202.1042230190
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................25201.553123071
............................GTGAATAAAGCGATGACAGTAGCTA...............................................................................................................................................................................................................................................................................25201.402821070
............................GTGAATAAAGCGATGACAGTAGCTAG..............................................................................................................................................................................................................................................................................26201.3026150110
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................23201.252524001
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGT........................................................2491.22113251
.......................................................TACCCTTATAAGACGCGTCCAGGTT....................................................................................................................................................................................................................................................25141.071512030
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TG.........................................................2390.8987010
.......................................................TACCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................24140.86124161
.............................TGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................22200.801616000
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATCA.........................................................................................................................................................................................25200.751515000
...................................................TAGATACCCTTATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................27140.6495040
............................GTGAATAAAGCGATGACAGTAG..................................................................................................................................................................................................................................................................................22200.601200120
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTA.......................................................2590.5654010
...........................TGTGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................24200.55114070
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATCAGGA......................................................................................................................................................................................28200.551111000
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGG.............................................................................................................................22200.551110100
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCATCA.........................................................................................................................................................................................26200.50108110
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATC..........................................................................................................................................................................................24200.50109100
...................................................TAGATACCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................28140.5077000
.............................TGAATAAAGCGATGACAGTAGCTAGA.............................................................................................................................................................................................................................................................................26200.4599000
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------T..........................................................2290.4442011
...............................................................TAAGACGCGTCCAGGTTGAGAA---------TTTG..................................................................................................................................................................................................................................26140.4365001
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCATCAGG.......................................................................................................................................................................................28200.4088000
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGAAA...................................................................................................25100.4041030
.......................................................TACCCTTATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................23140.3654010
...................................................TAGATACCCTTATAAGACGCGTCC.........................................................................................................................................................................................................................................................24140.3654001
.......................................................TACCCTTATAAGACGCGTCCAGGTTGA..................................................................................................................................................................................................................................................27140.3654010
..............................................................................................................................................AAGTTATGT------------------AG---AGTCGTGGGCT--------TTA................................................................................................................................25200.3573022
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATCAGG.......................................................................................................................................................................................27200.3570070
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGAAAC..................................................................................................26100.3032001
..............................................................................................TTTGTGGATGAGTAACTCGTGT----------ATACT.................................................................................................................................................................................................27200.3062040
............................GTGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................23200.3060600
............................................................TTATAAGACGCGTCCAGGTTGAGAA---------TT....................................................................................................................................................................................................................................27140.2943010
................................................................................................TGTGGATGAGTAACTCGTGT----------ATACT.................................................................................................................................................................................................25200.2550050
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCT...........................................................................................................................24200.2554100
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCTC..........................................................................................................................25200.2550140
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCATC..........................................................................................................................................................................................25200.2555000
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTAGA.....................................................2790.2222000
...........................................................................................................................................................................................................................................CGCTGAACT----------TGCT-------TGTAGAAGGTGGC..............................................2690.2222000
.....................................................GATACCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................26140.2130030
.............................................................TATAAGACGCGTCCAGGTTGAGAA---------TT....................................................................................................................................................................................................................................26140.2131020
.......................................................TACCCTTATAAGACGCGTCCAGGTTG...................................................................................................................................................................................................................................................26140.2131020
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCAT...........................................................................................................................................................................................23200.2041030
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCAT...........................................................................................................................................................................................24200.2043010
....................................................................................................................................................................................................TGGCTCGTTCTTCGGTGTTGACATC.......................................................................................................25100.2022000
...............................................................................................................................................AGTTATGT------------------AG---AGTCGTGGGCT--------TTA................................................................................................................................24200.2041120
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGA.....................................................................................................23100.2022000
................................................................................................TGTGGATGAGTAACTCGTGT----------ATACTT-...............................................................................................................................................................................................26200.2044000
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTATGGCT...........................................................................................................................26200.2042020
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATG..............................................................................................................................21200.2043001
...............................................................................................................................................................................................................................................................................AGGTGGCCACTCAGAG-GTGGGT..............................22120.1721001
............................................................................................................................................................................................................................................................................AGAAGGTGGCCACTCAGAG-GTGGGT..............................25120.1720020
...............................................................................................................................................................................................................................................................................AGGTGGCCACTCAGAG-GTGGG...............................21120.1722000
................................................................................................................................................................................................................................................AACT----------TGCT-------TGTAGAAGGTGGC..............................................21130.1521010
.............................................................................................................................................AAAGTTATGT------------------AG---AGTCGTGGGCT--------TTA................................................................................................................................26200.1530021
..........................GTGTGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................25200.1531020
..........................GTGTGAATAAAGCGATGACAGTAG..................................................................................................................................................................................................................................................................................24200.1530021
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTA................................................................................................................................21200.1530030
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCA............................................................................................................................................................................................23200.1531020
..........................................................................................................................................AGGAAAGTTATGT------------------AG---AGTCGTGGGC............................................................................................................................................25200.1533000
............................GTGAATAAAGCGATGACAGTA...................................................................................................................................................................................................................................................................................21200.1530030
........................................................ACCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................23140.1422000
...............................................................TAAGACGCGTCCAGGTTGAGAA---------TT....................................................................................................................................................................................................................................24140.1422000
....................................................AGATACCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................27140.1422000
.................................................................................................................................................................................................................................................................T-------TGTAGAAGGTGGCCACTCAGAG-GT..................................2580.1311000
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTAG......................................................2690.1110001
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------TGTAGAA....................................................2890.1111000
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGAAAA..................................................................................................26100.1010010
..................................................................................................................................................................................................TATGGCTCGTTCTTCGGTGTTGACATC.......................................................................................................27100.1011000
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCATCAGGA......................................................................................................................................................................................29200.1022000
.................................................................................................................................................................................................TTATGGCTCGTTCTTCGGTGTTGACA.........................................................................................................26100.1011000
..............................................................................................TTTGTGGATGAGTAACTCGTGT----------ATACTT-...............................................................................................................................................................................................28200.1022000
.................................................................................................................................................................................................TTATGGCTCGTTCTTCGGTGTTGACC.........................................................................................................26100.1010001
...............................................................................TGAGAA---------TTTGTGGATGAGTAACTCG...................................................................................................................................................................................................................25200.1022000
......................................................................................................................................................................................................GCTCGTTCTTCGGTGTTGACATCGAAA...................................................................................................27100.1010010
.................................TAAAGCGATGACAGTAGCTAGATACCCT.......................................................................................................................................................................................................................................................................28200.1022000
........................................................................................................AGTAACTCGTGT----------ATACTT-TCATCA.........................................................................................................................................................................................24200.1022000
.................................................................................................................................................................................................TTATGGCTCGTTCTTCGGTGTTGACATC.......................................................................................................28100.1011000
....................................................................................................................................................................................................TGGCTCGTTCTTCGGTGTTGACATCG......................................................................................................26100.1011000
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTATGG.............................................................................................................................24200.1020020
............................GTGAATAAAGCGATGACAGTAGCTAGAT............................................................................................................................................................................................................................................................................28200.1022000
............................GTGAATAAAGCGATGACAGT....................................................................................................................................................................................................................................................................................20200.1022000
........................................................................................................................................................................................T--------TTATGGCTCGTTCTTCGGTGTTGACA.........................................................................................................27100.1010010
.....................................................................................................................................................GT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................22200.1022000
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATCAGGAA.....................................................................................................................................................................................29200.1022000
...................................................................................................................................................................................TGGGCT--------TTATGGCTCGTTCTTCGGTGT..............................................................................................................27200.1022000
.....................................................................................................................................................................................................GGCTCGTTCTTCGGTGTTGACATC.......................................................................................................24100.1011000
...................................................................................................................................................ATGT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................24200.1022000
.........................................TGACAGTAGCTAGATACCCTTATAAGA................................................................................................................................................................................................................................................................27200.1021010
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACT.........................................................................................................19100.1010010
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGAAACT.................................................................................................27100.1010010
....................................................................................................................................................................................................TGGCTCGTTCTTCGGTGTTGACAT........................................................................................................24100.1011000
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGAA....................................................................................................24100.1010010
......................................................................................................................................................................................................GCTCGTTCTTCGGTGTTGACATC.......................................................................................................23100.1011000
......TCCTATGATGGGATCGAAGAGTGTGAA...................................................................................................................................................................................................................................................................................................27200.1021010
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATCGATTA..................................................................................................26100.1010010
..........................................................................CAGGTTGAGAA---------TTTGTGGATGAG..........................................................................................................................................................................................................................23200.1021010
........................................................................................................................................................................................................TCGTTCTTCGGTGTTGACATC.......................................................................................................21100.1011000
...............................................................................................................................................................................................................................................................................AGGTGGCCACTCAGAG-GTGG................................20120.0811000
...............................................................................................................................................................................................................................................................................AGGTGGCCACTCAGAG-GTGGGTGCAA..........................26120.0810010
............................................................................................................................................................................................................................................................................AGAAGGTGGCCACTCAGAG-GTGGGTG.............................26120.0811000
...................................................................................................................................................................................................................................................T----------TGCT-------TGTAGAAGGTGGCCAC...........................................21130.0811000
...................................................................................................................................................................................................................................TGAAGATACGCTGAACT----------TGCT-------...........................................................21130.0811000
...............................................................................................................................................................................................................................................................................AGGTGGCCACTCAGAG-GT..................................18130.0810010
...................................................................................................................................................................................................................................................T----------TGCT-------TGTAGAAGGTGGCCACTCA........................................24130.0811000
..............................................................................................................................................................................................................................................................TGCT-------TGTAGAAGGTGGCCACTCA........................................23130.0810010
...........................................................CTTATAAGACGCGTCCAGGTT....................................................................................................................................................................................................................................................21140.0711000
.......................................................TACCCTTATAAGACGCGTCC.........................................................................................................................................................................................................................................................20140.0710010
.............................................................TATAAGACGCGTCCAGGTTGAGA................................................................................................................................................................................................................................................23140.0711000
...................................................TAGATACCCTTATAAGACGCGTCCA........................................................................................................................................................................................................................................................25140.0710010
................................................AGCTAGATACCCTTATAAGACGCGTC..........................................................................................................................................................................................................................................................26140.0711000
.....................................................GATACCCTTATAAGACGCGTCCAGGTT....................................................................................................................................................................................................................................................27140.0710010
................................................................AAGACGCGTCCAGGTTGAGAA---------TTTGT.................................................................................................................................................................................................................................26140.0711000
..............................................................ATAAGACGCGTCCAGGTTGAGAA---------TTTG..................................................................................................................................................................................................................................27140.0711000
....................................................AGATACCCTTATAAGACGCGTCCAGG......................................................................................................................................................................................................................................................26140.0711000
..............................................................ATAAGACGCGTCCAGGTTGAGAA---------TTT...................................................................................................................................................................................................................................26140.0711000
.........................................................CCCTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................22140.0711000
...............................................................TAAGACGCGTCCAGGTTGAGAA---------......................................................................................................................................................................................................................................22140.0711000
.......................................................TACCCTTATAAGACGCGTCCAGGC.....................................................................................................................................................................................................................................................24140.0711000
............................................................................................................................................................................................................TCTTCGGTGTTGACATCGAAACTTG...............................................................................................25140.0711000
...................................................TAGATACCCTTATAAGACGCGTC..........................................................................................................................................................................................................................................................23140.0711000
..............................................................ATAAGACGCGTCCAGGTTGAGAA---------TT....................................................................................................................................................................................................................................25140.0711000
.................................................................AGACGCGTCCAGGTTGAGAA---------TT....................................................................................................................................................................................................................................22140.0711000
.......................................................TACCCTTATAAGACGCGTCCAGGG.....................................................................................................................................................................................................................................................24140.0711000
...........................................................CTTATAAGACGCGTCCAGGT.....................................................................................................................................................................................................................................................20140.0711000
...............................................................TAAGACGCGTCCAGGTTGAGAA---------T.....................................................................................................................................................................................................................................23140.0711000
............................GTGAATAAAGCGATGACAGTAGCTAGG.............................................................................................................................................................................................................................................................................27200.0511000
...........................................................................................................AACTCGTGT----------ATACTT-TCATCAGGAAAG...................................................................................................................................................................................27200.0510010
.....................................................................................................................................................GT------------------AG---AGTCGTGGGCT--------TTATGGCTCG.........................................................................................................................25200.0511000
..............................................................................................................................................AAGTTATGT------------------AG---AGTCGTGGGCT--------T..................................................................................................................................23200.0511000
....................................................................................................GATGAGTAACTCGTGT----------ATACT.................................................................................................................................................................................................21200.0510001
..............................GAATAAAGCGATGACAGTAGCT................................................................................................................................................................................................................................................................................22200.0511000
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCTT..........................................................................................................................25200.0511000
.........................................................................................................................................CAGGAAAGTTATGT------------------AG---AGTCGTGGGC............................................................................................................................................26200.0510001
....................................................................................A---------TTTGTGGATGAGTAACTCGTGT----------A.....................................................................................................................................................................................................24200.0510010
...........................TGTGAATAAAGCGATGACAGTAGCTA...............................................................................................................................................................................................................................................................................26200.0511000
...............................................................................................................................................AGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................28200.0511000
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATCAA........................................................................................................................................................................................26200.0511000
.................................................................................................................................................TTATGT------------------AG---AGTCGTGGGCT--------TTATGG.............................................................................................................................25200.0510010
...............................................................................................TTGTGGATGAGTAACTCGTGT----------ATACT.................................................................................................................................................................................................26200.0510001
...................................................................................................................................................................................TGGGCT--------TTATGGCTCGTTCTTCGGT................................................................................................................25200.0511000
.........TATGATGGGATCGAAGAGTGTGAATA.................................................................................................................................................................................................................................................................................................26200.0510010
............GATGGGATCGAAGAGTGTGA....................................................................................................................................................................................................................................................................................................20200.0510010
.............................TGAATAAAGCGATGACAGTAGCTA...............................................................................................................................................................................................................................................................................24200.0511000
.....TTCCTATGATGGGATCGAAGAGT........................................................................................................................................................................................................................................................................................................23200.0511000
....................................................................................A---------TTTGTGGATGAGTAACTCGT..................................................................................................................................................................................................................21200.0510010
........................................................................................................AGTAACTCGTGT----------ATACTT-TCATC..........................................................................................................................................................................................23200.0511000
...........................................................................AGGTTGAGAA---------TTTGTGGATGAGT.........................................................................................................................................................................................................................23200.0511000
......TCCTATGATGGGATCGAAGAGT........................................................................................................................................................................................................................................................................................................22200.0510100
...................................................................ACGCGTCCAGGTTGAGAA---------TTTGTGG...............................................................................................................................................................................................................................25200.0510010
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCATCAG........................................................................................................................................................................................27200.0511000
.....................GAAGAGTGTGAATAAAGCGATGA........................................................................................................................................................................................................................................................................................23200.0511000
................................................................................................................................................GTTATGT------------------AG---AGTCGTGGGCT--------TTATG..............................................................................................................................25200.0510010
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTATGGCTC..........................................................................................................................27200.0511000
......................................................................................................TGAGTAACTCGTGT----------ATACTT-TCC............................................................................................................................................................................................23200.0510010
.......................................................................................................GAGTAACTCGTGT----------ATACTT-TCATCAG........................................................................................................................................................................................26200.0510010
.................................................................................................................................................TTATGT------------------AG---AGTCGTGGGCT--------TTATGGC............................................................................................................................26200.0510010
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGT........................................................................................................................27200.0510001
.....................................................................................................ATGAGTAACTCGTGT----------ATACTT-TCA............................................................................................................................................................................................24200.0511000
..................................................................................................TGGATGAGTAACTCGTGT----------ATACTT-TC.............................................................................................................................................................................................26200.0511000
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGA........................................................................................................................27200.0510100
.........................................................................CCAGGTTGAGAA---------TTTGTTA...............................................................................................................................................................................................................................19200.0511000
........................................................................................................AGTAACTCGTGT----------ATACTT-TCATCAGGA......................................................................................................................................................................................27200.0510010
........................................................................................................AGTAACTCGTGT----------ATACTT-TCATCAG........................................................................................................................................................................................25200.0511000
........................................................................TCCAGGTTGAGAA---------TTTGTGGAT.............................................................................................................................................................................................................................22200.0510010
............................GTGAATAAAGCGATGACAG.....................................................................................................................................................................................................................................................................................19200.0510100
..............................GAATAAAGCGATGACAGTAG..................................................................................................................................................................................................................................................................................20200.0511000
............................GTGAATAAAGCGATGACAGTAGCTAGC.............................................................................................................................................................................................................................................................................27200.0510010
...............................AATAAAGCGATGACAGTAGCTAGATACCC........................................................................................................................................................................................................................................................................29200.0511000
..................................AAAGCGATGACAGTAGCTAGATACCC........................................................................................................................................................................................................................................................................26200.0511000
..................................................................................................................................TT-TCATCAGGAAAGTTATGT------------------AG---AGT...................................................................................................................................................25200.0511000
.................................TAAAGCGATGACAGTAGCTAGAT............................................................................................................................................................................................................................................................................23200.0511000
.....TTCCTATGATGGGATCGAAGAA.........................................................................................................................................................................................................................................................................................................22200.0511000
........................................................................................................AGTAACTCGTGT----------ATACTT-TCATCAGG.......................................................................................................................................................................................26200.0511000
...........................TGTGAATAAAGCGATGACAGTAG..................................................................................................................................................................................................................................................................................23200.0510010
...............................................................................................................................................AGTTATGT------------------AG---AGTCGTGGGCT--------TT.................................................................................................................................23200.0511000
...........TGATGGGATCGAAGAGTGTGAATATT...............................................................................................................................................................................................................................................................................................26200.0510001
..................................................................................................................................................TATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCG.........................................................................................................................28200.0510001
...............................................................................................................................................AGTTATGT------------------AG---AGTCGTGGGCT--------T..................................................................................................................................22200.0511000
...............................................................................................TTGTGGATGAGTAACTCGTGT----------ATACTT-...............................................................................................................................................................................................27200.0511000
...................................................................................AA---------TTTGTGGATGAGTAACTCG...................................................................................................................................................................................................................21200.0510010
....................................................................CGCGTCCAGGTTGAGAA---------TTTGTGGAT.............................................................................................................................................................................................................................26200.0511000
.....................................................................................................................................TCATCAGGAAAGTTATGT------------------AG---AGTCG.................................................................................................................................................25200.0511000
.....................................................................................................................................................GT------------------AG---AGTCGTGGGCT--------TTATGGCTC..........................................................................................................................24200.0511000
...............................AATAAAGCGATGACAGTAGCTAGATA...........................................................................................................................................................................................................................................................................26200.0510001
...........................................................................................................................................................................................................................................................................................................CAGCCAGGACGGACCTTTCCACCAC25200.0510001
droYak3
AA---TTCCTATGATGAGATCGAAGGGTGTGAATAAAGCGATGACAGTAGCTAGATATCCTTATAAGACGCGTCCAGGCTGAGAA---------TTTGTGGATGAGTAACTCGGGT----------ATACTT-TCATCAGGAAAGTTATGT------------------AG---AGTCGTGGGCT--------TTATGGCTCGTTCTTCGGTGTTGACATCGAAACTTGAAGATACGCTGAACT----------TGCT-------TGTAGAAGGTGGCCACTCAGAG-GTGGGTGTGGCCAGCCAGGACGGACCTTTCCACCACSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.................................................................................................................................................................................................................................CTTGAAGATACGCTGAACT----------TGCT-------T..........................................................24200.30606000000000
.................................................................................................................................................................................................................................CTTGAAGATACGCTGAACT----------TGCT-------...........................................................23200.20404000000000
.............................................................................................................................................................................................................................GAAACTTGAAGATACGCTGAACT----------......................................................................23200.15302100000000
.................................................................................................................................................................................................................................................................................................TGGGTGTGGCCAGCCAGGACGGACC..........25200.10200200000000
...........................TGTGAATAAAGCGATGACAGTAG..................................................................................................................................................................................................................................................................................23200.10202000000000
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCTCG.........................................................................................................................26200.10202000000000
...........................TGTGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................24200.10200000020000
...............................................................................................................................................................................................................................AACTTGAAGATACGCTGAACT----------TGCT-------TG.........................................................27200.05101000000000
.............................................................................................................................................AAAGTTATGT------------------AG---AGTCGTGGGCT--------TT.................................................................................................................................25200.05101000000000
............................................................................................................................................................................................................................CGAAACTTGAAGATACGCTGAACC----------......................................................................24200.05100100000000
....................................................................................................................................................................................................................GTTGACATCGAAACTTGAAG............................................................................................20200.05100000010000
..........................................................................................................................................................................................................................................................................................................CCAGCCAGGACGGACCTTTCCACCA.25200.05101000000000
...............................................................................................................................................AGTTATGT------------------AG---AGTCGTGGGC............................................................................................................................................20200.05101000000000
............................GTGAATAAAGCGATGACAGTAG..................................................................................................................................................................................................................................................................................22200.05101000000000
...........................TGTGAATAAAGCGATGACAGTA...................................................................................................................................................................................................................................................................................22200.05100000100000
..................................................................................................................................................................................................................................TTGAAGATACGCTGAACT----------TGCT-------TG.........................................................24200.05101000000000
..................................................................................................................................................................................................................................TTGAAGATACGCTGAACT----------TGCT-------...........................................................22200.05101000000000
....................................................................................................................................................TGT------------------AG---AGTCGTGGGCT--------TTATGGCTC..........................................................................................................................25200.05101000000000
..................................................................................................................................................................................................TATGGCTCGTTCTTCGGTGTTGACATC.......................................................................................................27200.05100100000000
........................................................................................................................................................................................................................................ATACGCTGAACT----------TGCT-------TGTAGAAGG..................................................25200.05100000000001
.............................TGAATAAAGCGATGACAGTAGC.................................................................................................................................................................................................................................................................................22200.05101000000000
.............................................................................................................................................................................................................................GAAACTTGAAGATACGCTGAACT----------TGCT-------...........................................................27200.05101000000000
..................................................................................................................................................................................................................................................................................TGGCCACTCAGAG-GTGGGTGTGGA.........................24200.05100000000001
.........................................................................................................................................CAGGAAAGTTATGT------------------AG---AGTCGTGGGC............................................................................................................................................26200.05100100000000
...............................................................................TGAGAA---------TTTGTGGATGAGTAAC......................................................................................................................................................................................................................22200.05100100000000
...........................TGTGAATAAAGCGATGACAGTAGCT................................................................................................................................................................................................................................................................................25200.05101000000000
..................................................................................................................................................................................................................................TTGAAGATACGCTGAACT----------TGC...................................................................21200.05101000000000
.........................................................................................................................................................................................................................................................................TGTAGAAGGTGGCCACTCAGAG-GTG.................................25200.05101000000000

Generated: 05/18/2015 at 02:58 AM