ID:

dps_2078

 Coordinate:

Unknown_group_557:2912-2997 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.8 -5.8

Flybase annnotation

CDS [Dpse\GA22198-cds]; exon [dpse_GLEANR_10007:1]; CDS [Dpse\GA22198-cds]; exon [dpse_GLEANR_10007:2]; intron [Dpse\GA22198-in]

No Repeatable elements found

mature
  1. dps_2078  Unknown_group_557:2939-2959 +
  2. dps_1631  4_group3:9624638-9624658 +
star
  1. dps_2078  Unknown_group_557:2914-2934 +
  2. dps_1631  4_group3:9624613-9624633 +

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------##################################################
TGGCATATCTCACACGGTGGCCAAGTATCGGTACATGCGGCGCTTTGAAGGTACGAGCTACTATCTCTGCTTGCAACAGAGCGTACCCACTGTCCAACTAACCCACTGTTTGGCACTTACATATGTATGTACATAGATCCCGCTAAGATTTTGGCAGAGGAGCGTCTAAAGAAACCATGTCAGCGC
****************************************************..................(((...(((..........)))..))).**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 M062
head
 SRR902012
CNS imaginal disc
 M059
embryo
 M022
male body		 SRR902010
ovaries
 GSM343916
embryo
...........................TCGGTACATGCGGCGCTTTGA.......................................................................................................................................... 21 0 2 4.00 8 2 6 0 0 0 0 0 0 0
..............................................................................................................................................CTAAGATTTTGGCAGAGGAGC....................... 21 0 2 4.00 8 2 5 0 1 0 0 0 0 0
..................................ATGCGGCGCTTTGAAGGTACG................................................................................................................................... 21 0 2 3.50 7 2 3 1 0 0 0 1 0 0
......................AAGTATCGGTACATGCGGCGC............................................................................................................................................... 21 0 2 2.50 5 3 1 1 0 0 0 0 0 0
TGGCATATCTCACACGGTGGC..................................................................................................................................................................... 21 0 2 2.50 5 5 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAGATTTTGGCAGAGGAGC....................... 20 0 2 2.00 4 1 1 2 0 0 0 0 0 0
...............................................................................................................................................TAAGATTTTGGCAGAGGAGCG...................... 21 0 2 2.00 4 3 1 0 0 0 0 0 0 0
..........................................................................................................................ATGTATGTACATAGATCCCGC........................................... 21 0 2 2.00 4 4 0 0 0 0 0 0 0 0
.....................CAAGTATCGGTACATGCGGCG................................................................................................................................................ 21 0 2 2.00 4 3 1 0 0 0 0 0 0 0
..............................................................................................................................................CTAGGATTTTGGCAGAGGAGC....................... 21 1 2 2.00 4 1 1 0 0 2 0 0 0 0
..................................................................................................................................................GATTTTGGCAGAGGAGCGTC.................... 20 0 2 1.50 3 0 3 0 0 0 0 0 0 0
............CACGGTGGCCAAGTATCGGTA......................................................................................................................................................... 21 0 2 1.50 3 2 1 0 0 0 0 0 0 0
.............................................................................AGAGCGTACCCACTGTCCAAC........................................................................................ 21 0 2 1.50 3 3 0 0 0 0 0 0 0 0
......................AAGTATCGGTACATGCGGCG................................................................................................................................................ 20 0 2 1.00 2 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................TTTGGCAGAGGAGCGTCTAA................. 20 0 2 1.00 2 1 0 0 0 0 0 1 0 0
....ATATCTCACACGGTGGCCAAG................................................................................................................................................................. 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.................................................................................................................................................AGATTTTGGCAGAGGAGC....................... 18 0 2 1.00 2 1 0 0 0 0 0 0 0 1
....................CCAAGTATCGGTACATGCGG.................................................................................................................................................. 20 0 2 1.00 2 1 1 0 0 0 0 0 0 0
.....................CAAGTATCGGTACATGCGGCGT............................................................................................................................................... 22 1 2 1.00 2 0 0 0 0 0 0 0 2 0
....................................................................................................................................................................TCTAAAGAAACCATGTCAGCG. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0
TGGCATGTCTCACACGGTGGC..................................................................................................................................................................... 21 1 2 1.00 2 2 0 0 0 0 0 0 0 0
....................................................ACGAGCTACTATCTCTGCTTG................................................................................................................. 21 0 2 1.00 2 1 1 0 0 0 0 0 0 0
.....................................CGGCGCTTTGAAGGTACGAGC................................................................................................................................ 21 0 2 1.00 2 0 0 2 0 0 0 0 0 0
.................................................................................................................................................AGATTTTGGCAGAGGAGCGT..................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.......................AGTATCGGTACATGCGGCGCT.............................................................................................................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..........................ATCGGTACATGCGGCGCTTTG........................................................................................................................................... 21 0 2 1.00 2 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CGTCTAAAGAAACCATGTCAG... 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.........................................................................CAACAGAGCGTACCCACTGTC............................................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.....................................................................CTTGCAACAGAGCGTACCCAC................................................................................................ 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.........................TATCGGTACATGCGGCGCTTT............................................................................................................................................ 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0
.....................CAAGTATCGGTACATGCGGC................................................................................................................................................. 20 0 2 1.00 2 1 1 0 0 0 0 0 0 0
.......................AGTATCGGTACATGCGGCGC............................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................TTGGCAGAGGAGCGTCTAAAG............... 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................AAGATTTTGGCAGAGGAGCG...................... 20 0 2 1.00 2 1 0 1 0 0 0 0 0 0
........................................................................................ACTGTCCAACTAACCCACTGT............................................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..........................................................TACTATCTCTGCTTGCAACA............................................................................................................ 20 0 2 1.00 2 2 0 0 0 0 0 0 0 0
............................CGGTACATGCGGCGCTTT............................................................................................................................................ 18 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................ATTTTGGCAGAGGAGCGTC.................... 19 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................TGCGGCGCTTTGAAGGTACG................................................................................................................................... 20 0 2 1.00 2 0 2 0 0 0 0 0 0 0
............................CGGTACATGCGGCGCTTTGA.......................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................GCCAAGTATCGGTACATGCGG.................................................................................................................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..............................GTACATGCGGCGCTTTGAAGG....................................................................................................................................... 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0
............................................................................CAGAGCGTACCCACTGTCCAA......................................................................................... 21 0 2 1.00 2 1 1 0 0 0 0 0 0 0
..........................................GTTTGATGGTACGTGCTACT............................................................................................................................ 20 3 4 0.75 3 3 0 0 0 0 0 0 0 0
.......................................................................................................CACTGTTTGGCACTTACATAT.............................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................................ACATGCGGCGCTTTGAAGG....................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..........CGCACGGTGGCCAAGTATCGG........................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGAGCGTCTAAAGAAACCATG....... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............CACGGTGGCCGGGTATCGGTA......................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................ATGTGTGTACATGGATCCCGC........................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................TACCCACTGTCCAACTAACCC.................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................CTGTCCAACTAACCCGCTGTT............................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................AAGATTTTGGCAGAGGAGCGT..................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................CTATCTCTGCCTGCAACAGA.......................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
....................CCAAGTATCGGTACATGCGGC................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CTAAGATTTTGGCAGAGGAA........................ 20 1 2 0.50 1 0 1 0 0 0 0 0 0 0
...........ACACGGTGGCCAAGTATCGGT.......................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................GTCCAACTAACCCACTGTTTGGC........................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................ATGTATGTACATGGATCCCGC........................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................TGCAACAGAGCGTACCCACTT.............................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.........................CGTCGGTACATGCGGCGCTTTG........................................................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..................GGCCAAGTATCGGTACATGCGGCGCT.............................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................TACATAGATCCCGCTAAGATTCC.................................. 23 2 2 0.50 1 0 0 0 1 0 0 0 0 0
...CATATCTCACACGGTGGCCAA.................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................TCGGTACATGCGGCGCTTTG........................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................TATCGGTACATGCGGCGCTTTG........................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................TGTATGTACATGGATCCCGCT.......................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGATTTTGGCAGAGGAGCG...................... 19 0 2 0.50 1 0 0 0 0 1 0 0 0 0
.........................TATCGGTACATGCGGCGCTTC............................................................................................................................................ 21 1 2 0.50 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................TATGTACATAGATCCCGCTAA........................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CTAAGATTTTGGCAGAGGAGG....................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGAGCGTCTAAAGAAACCATGTCAGCG. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................GTATCGGTACATGCGGCGCTTT............................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........TCACACGGTGGCCAAGTATCGG........................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGGAGAAACCATGTCAGCGC 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GTATGTACATAGATCCCGCT.......................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................ACAGAGCGTACCCACTGTCCA.......................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................TGTATGTACATAGATCCCGCT.......................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..GCATGTCTCGCACGGTGGC..................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................ACTAACCCACTGTTTGGCACT..................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........TCACACGGTGGCCAAGTATCGGTACA....................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAGATTTTGGCAGAGGAG........................ 19 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...............................................................................................AACTAACCCACTGTTTGGCAC...................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CTAGGATTTTGGCAGAGGA......................... 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............................CGGTACATGCGGCGCTTTGAA......................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................GCTAAGATTTTGGCAGAGGAG........................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................ATGCGGCGCTTTGAAGGTA..................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0 0
......................AAGTATCGGTACATGCGGC................................................................................................................................................. 19 0 2 0.50 1 0 1 0 0 0 0 0 0 0
............CACGGTGGCCAAGTGTCGGTA......................................................................................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................CATATGTATGTACATGGATCCCG............................................ 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.........TCACACGGTGGCCAAGTATCGGTAC........................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................TTTGATGGTACGTGCTACT............................................................................................................................ 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................................TTTGACACTTACATATGTATG......................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
....................CCAAGTATCGGTACATGCGGCG................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................TCGGTACATGCGGCGCTTTGAA......................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................................................................................................GTATGTACATAGATCCCGCTT......................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............CACGGTGGCCAAGTATCGG........................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
TGGCATATCTCACACGGTGG...................................................................................................................................................................... 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................GATTTTGGCAGAGGAGCGT..................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................GTATCGGTACATGCGGCGCTC............................................................................................................................................. 21 1 2 0.50 1 0 1 0 0 0 0 0 0 0
..................GGCCAAGTATCGGTACATGCGGCGC............................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................TGCGAGCTACTATCTCTGCTTG................................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TCCCGCTAGGATTTTGGCAGA............................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................GTGCATGCGGCGCTTTGAAGT....................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTCTAAAGAAACCATGTCAG... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................................ACATGCGGCGCTTTGAAGGT...................................................................................................................................... 20 0 2 0.50 1 0 0 0 0 0 1 0 0 0
...........................TCGGTACATGCAGCGCTTTGA.......................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................TCGGTACATGCGGCGCTTTGAAGATC..................................................................................................................................... 26 2 2 0.50 1 0 1 0 0 0 0 0 0 0
...............................................................................AGCGTACCCACTGTCCAACTCCA.................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................CCGCTAAGATTTTGGCAGAGG.......................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................TACTATCTCTGCTTGCAACAGAGCGT...................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................ATTTTGGCAGAGGAGCGTCTA.................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGATTTTGGCCGAGGAGCGTC.................... 21 1 2 0.50 1 0 0 0 0 0 1 0 0 0
.......................AGTATCGGTACATGCGGC................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................TGAAGATCCCGCTAAGATTTTGGCA.............................. 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................CTACTATCTCTGCTTGCAACG............................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTTGGCAGGGGAGCGTCTAA................. 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CTGAGATTTTGGCAGAGGAGC....................... 21 1 2 0.50 1 0 0 1 0 0 0 0 0 0
......ATCTCACACGGTGGCCAAGT................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................CACTGTTTGGCACTTACATATC............................................................. 22 1 2 0.50 1 0 0 0 1 0 0 0 0 0
......ATCTCACACGGTGGCCAAGTA............................................................................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................CAGAGGAGCGTCTAAAGAAAC........... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAGATTTTGGCGGAGGAGC....................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
....ATGTCTCACACGGTGGCCAAGTT............................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CTGGGATTTTGGCAGAGGAGC....................... 21 2 2 0.50 1 0 0 0 0 1 0 0 0 0
.....................CAAGTGTCGGTGCATGCGGCG................................................................................................................................................ 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTCTAAAGAAGCCATGTCAGC.. 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GTGTGTACATGGATCCCGCTA......................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................TGAAGGTACGAGCTACTAT.......................................................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0 0 0 0
....ATATCTCACACGGTGGCCAAGT................................................................................................................................................................ 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.............ACGGTGGCCAAGTATCGGTACC....................................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................AGATCCCGCTAAGATTTTGG................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................CTTGCAACAGAGCGTACCCACT............................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCAGAGGAGCGTCTAAGG............... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0
................................ACATGCGGCGCTTTGAAGA....................................................................................................................................... 19 1 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................GAGGAGCGTCTAAAGAAACC.......... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................TGGCCAAGTATCGGTGCATGC.................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................GAGTATCGGTACATGCGGCGC............................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................AGCTAACCCACTGTTTGGCAC...................................................................... 21 1 2 0.50 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................................GGCAGAGGAGCGTCTAAAGA.............. 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................TATCGGTACATGCGGCGCTTTC........................................................................................................................................... 22 1 2 0.50 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................TAAAGAAACCATGTCAGCGC 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
........................................................................................................................ATATGTATGTACATGGATCCC............................................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................ATTTTGGCAGAGGAGCGTCTAAAG............... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................TGCTATCTCTGCTTGCAACA............................................................................................................ 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................ACATAGATCCCGCTAAGATTTT.................................. 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...........................TCGGTACATGCGGCGCTTT............................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................CTTGCAACAGAGCGTACCCA................................................................................................. 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................AAGATTTTGGCAGAGGAGC....................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................ATGCGGCGCTTTGAAGGCACG................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................GCACTTACATATGTATGTACA..................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................................ACATGCGGCGCTTTGAAGTAAA.................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................ATCCCGCTAAGATTTTGGCAGA............................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................TACATGCGGCGCTTTGAAGA....................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................GATTTTGGCAGAGGAGCGTCT................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................ATCGGTACATGCGGCGCTTT............................................................................................................................................ 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..........................ATCGGTACATGCGGCGCTTC............................................................................................................................................ 20 1 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................ATGCGGCGCTTTGAAGGTAC.................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..............................................................................GAGCGTACCCACTGTCCAACT....................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........CTCACACGGTGGCCAAGTATC............................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................CATGCGGCGCTTTGAAGGTACG................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..................GGCCAAGTATCGGTACATGCG................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................AAGTGTCGGTACATGCGGC................................................................................................................................................. 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................AGGGCACTAGCTACTATCTC....................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 1
................................................................................................GCTTACCCACTGTTTGACACT..................................................................... 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................TATGTATGTACATGGATCCCG............................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................CACTGTCCAGCTAGCCCACT............................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0
......................GGGTGTCGGTACATGCGGCGC............................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0
............CACGGTGGCCAGGTGTCGGTG......................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................GGATCCCGCTGGGATTTTGGC............................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TTCGCGGAGGAGCTTCTAAA................ 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................TATGTATGTGCGTGGATCCCG............................................ 21 3 10 0.10 1 1 0 0 0 0 0 0 0 0
.........................................................................CAACAGAGCGTGACCACTT.............................................................................................. 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACCGTATAGAGTGTGCCACCGGTTCATAGCCATGTACGCCGCGAAACTTCCATGCTCGATGATAGAGACGAACGTTGTCTCGCATGGGTGACAGGTTGATTGGGTGACAAACCGTGAATGTATACATACATGTATCTAGGGCGATTCTAAAACCGTCTCCTCGCAGATTTCTTTGGTACAGTCGCG
****************************************************************************************..................(((...(((..........)))..))).**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 GSM444067
head
 M022
male body		 M062
head
 SRR902012
CNS imaginal disc
 GSM343916
embryo
.........................................................GATGATAGAGACGAACGTTGT............................................................................................................ 21 0 2 5.00 10 2 8 0 0 0 0 0 0
.................................................................................GCATGGGTGACAGGTTGAT...................................................................................... 19 0 2 2.50 5 0 5 0 0 0 0 0 0
................CACCGGTTCATAGCCATGTAC..................................................................................................................................................... 21 0 2 2.50 5 5 0 0 0 0 0 0 0
...............................................................................................................................................................CTCGCAGATTTCTTTGGTACA...... 21 0 2 1.50 3 2 1 0 0 0 0 0 0
.....................GTTCATAGCCATGTACGCCGC................................................................................................................................................ 21 0 2 1.50 3 3 0 0 0 0 0 0 0
...............................................................................CCGCATGGGTGACAGGTTGAT...................................................................................... 21 1 2 1.50 3 0 3 0 0 0 0 0 0
..................................................................GACGAACGTTGTCTCGCAT..................................................................................................... 19 0 2 1.50 3 0 3 0 0 0 0 0 0
.....................................GCCGCGAAACTTCCATGCTCG................................................................................................................................ 21 0 2 1.50 3 2 0 1 0 0 0 0 0
.................................................................................GCATGGGTGACAGGTTGATTG.................................................................................... 21 0 2 1.50 3 1 2 0 0 0 0 0 0
...........................................................................................................................................GGCGATTCTAAAACCGTCTCC.......................... 21 0 2 1.50 3 3 0 0 0 0 0 0 0
.............................................................................................GGTTGATTGGGTGACAAACCG........................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................GTCTCGCATGGGTGACAGGTT......................................................................................... 21 0 2 1.00 2 1 0 1 0 0 0 0 0
.............................................................................................................................ATACATGTATCTAGGGCGGTT........................................ 21 1 2 1.00 2 2 0 0 0 0 0 0 0
..............................................................................CTCGCATGGGTGACAGGTTGA....................................................................................... 21 0 2 1.00 2 1 1 0 0 0 0 0 0
.............................................................................................GGTTGATTGGGTGACAAACC......................................................................... 20 0 2 1.00 2 0 2 0 0 0 0 0 0
.....................................................................................GGGTGACAGGTTGATTGGGT................................................................................. 20 0 2 1.00 2 2 0 0 0 0 0 0 0
.............................................................................................................AACCGTGAATGTATACATACA........................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................GCAGATTTCTTTGGTACAGTC... 21 0 2 1.00 2 0 0 0 0 2 0 0 0
......................................................................................GGTGACAGGTTGATTGGGTGA............................................................................... 21 0 2 1.00 2 1 1 0 0 0 0 0 0
...................................................................................................................................CTATCTAGGGCGATTCTAAAA.................................. 21 1 2 1.00 2 0 2 0 0 0 0 0 0
....................................................................CGAACGTTGTCTCGCGTGGGT................................................................................................. 21 1 2 1.00 2 2 0 0 0 0 0 0 0
...............................................TTCCATGCTCGATGATAGAGA...................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
..........................................................ATGATAGAGACGAACGTTGTC........................................................................................................... 21 0 2 1.00 2 0 2 0 0 0 0 0 0
.........AGTGTGCCACCGGTTCATAGC............................................................................................................................................................ 21 0 2 1.00 2 0 0 2 0 0 0 0 0
...GTATAGAGTGTGCCACCGGT................................................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0
..................CCGGTTCATAGCCATGTACGCC.................................................................................................................................................. 22 0 2 1.00 2 2 0 0 0 0 0 0 0
.....................................................................................GGGTGACAGGTTGATTGGGTG................................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
........GAGTGTGCCACCGGTTCATAG............................................................................................................................................................. 21 0 2 1.00 2 1 0 1 0 0 0 0 0
..................................................................................CATGGGTGACAGGTTGATTGG................................................................................... 21 0 2 1.00 2 1 0 1 0 0 0 0 0
............................................................................GTCTCGCATGGGTGACAGGT.......................................................................................... 20 0 2 1.00 2 1 1 0 0 0 0 0 0
..................................................................................................................................................................GCAGGTTTCTTTGGTACAGTC... 21 1 2 1.00 2 2 0 0 0 0 0 0 0
....................................................................CGAACGTCGTCTCGCATGGGT................................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................GCATGGGTGACAGGTTGATTGGGTG................................................................................ 25 0 2 0.50 1 0 1 0 0 0 0 0 0
............................................................................................AGGTTGATTGGGTGACAAACTT........................................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................ACATACATGTATCTAGGGCG........................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................AGGTTGATTGGGTGACAAAC.......................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0
..TGTATAGAGTGTGCCACCGGTT.................................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................GCACGGGTGACAGGTTGGTT..................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................TAGGGCGATTCTAAAACCGT.............................. 20 0 2 0.50 1 0 0 1 0 0 0 0 0
................CACCGGTTCGTAGCCATGTAC..................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................CCTCTAGGGCGATTCTAAAACC................................ 22 2 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................GGGTGACAAACCGTGAATGTA................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................AGGTTGATTGGGTGACAAACT......................................................................... 21 1 2 0.50 1 0 1 0 0 0 0 0 0
............GTGCCGCCGGTTCATAGCCA.......................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................ACAGGTTGATTGGGTGACAA............................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................GGGGACAGGTTGATTGGGTG................................................................................ 20 1 2 0.50 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................TCTCCTCGCAGATTTCTTTG........... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................ATTGGGTGACAAACTGTGAAT................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................ATGATAGAGACGAACGTTGT............................................................................................................ 20 0 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................CATGGGTGGCAGGTTGGTT..................................................................................... 19 2 2 0.50 1 0 0 0 0 0 1 0 0
.............................................................................................................................ATACATGTATCTAGGGCGAT......................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
................TTCCGGTTCATAGCCATGTACGC................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................ATGGGTGACAGGTTGATTGGG.................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
................................TGTACGCCGCGGGACTTCCAT..................................................................................................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0 0
..................CCGGTTCATAGCCATGTACGC................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................CCGCGAAACTTCCATGCTCGA............................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................GTGACAGGTTGATTGGGTG................................................................................ 19 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................................................................................................................GGGCGATTCTAAAACCGTCTC........................... 21 0 2 0.50 1 0 0 0 1 0 0 0 0
......................................................CTCGATGATAGAGACGGACGT............................................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0 0
...............CCACCGGTTCGTAGCCATGTA...................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................TGACAGGTTGGTTGGGTGAC.............................................................................. 20 1 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................GTCTCCTCGCAGGTTTCTTTG........... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................GATTGGGTGACAAACCGTGA..................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................CGTCTCCTCGCAGATTTCTTT............ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...............CCACCGGTTCATAGCCATGTACG.................................................................................................................................................... 23 0 2 0.50 1 0 0 0 0 0 0 0 1
.....................................................GCTCGATGATAGAGACGAACG................................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0
.....................................................................................TGGTGACAGGTTGGTTGGGTG................................................................................ 21 2 2 0.50 1 0 0 0 1 0 0 0 0
............GTGCCACCGGTTCATAGCCAT......................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................TCGCAGATTTCTTTGGTACAGTC... 23 0 2 0.50 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................GTCTCCTCGCAGGTTTCTTT............ 20 1 2 0.50 1 0 1 0 0 0 0 0 0
........................................................................................................TGACAAACCGTGAATGTATAC............................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................GGTGACAGGTTGATTGGGT................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................GGCAGGTTGGTTGGGTGACAA............................................................................ 21 2 2 0.50 1 0 0 0 0 0 0 1 0
.................................................................................................................................................................CGCAGATTTCTTTGGTACAGT.... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
........................................................CGATGATAGAGACGAACGTTT............................................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................TCGCATGGGTGACAGGTTGG....................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0
.........................ATAGCCATGTACGCCGCGAAAC........................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0
........................CATAGCCATGTACGCCGCGG.............................................................................................................................................. 20 1 2 0.50 1 1 0 0 0 0 0 0 0
...GTATAGAGTGTGCCACCGGTT.................................................................................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0 0 0
....................................CGCCGCGAAACTTCCATGCTC................................................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0 0 0
................................................................................CGCATGGGTGACAGGTTG........................................................................................ 18 0 2 0.50 1 1 0 0 0 0 0 0 0
........GAGTGTGCCACCGGTTCATA.............................................................................................................................................................. 20 0 2 0.50 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................TCCTCGCAGATTTCTTTGGTAC....... 22 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................CGCCGCGGGACTTCCATGCTC................................................................................................................................. 21 2 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................GGGTGACAGGTTGATTGGG.................................................................................. 19 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................GATTGGGTGACAAACTGTGAA.................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................GTCTCCTCGCAGATTTCTTT............ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................TCTCGCATGGGTGACAGGTTG........................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................GATGATAGAGACGAACGTT.............................................................................................................. 19 0 2 0.50 1 0 1 0 0 0 0 0 0
.............TGCCACCGGTTCATAGCCGTG........................................................................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.............................................ACTTCCATGCTCGATGATAGA........................................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................TCCTCGCAGATTTCTTTGGTA........ 21 0 2 0.50 1 0 0 1 0 0 0 0 0
...........................AGCCATGTACGCCGCGAAACT.......................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................ACGCCGCGGAACTTCCATGCT.................................................................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0 0 0
....................................................................................................TGGGTGACAAACTGTGAATGT................................................................. 21 1 2 0.50 1 0 0 1 0 0 0 0 0
......TAGAGTGTGCCACCGGTTCAT............................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................CCGGTGACAGGTTGATTGGGTG................................................................................ 22 2 2 0.50 1 0 1 0 0 0 0 0 0
............................................................................................................................................................CTCCTCGCAGGTTTCTTTGGT......... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................TCATGGGTGACAGGTTGATTG.................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................GTTGTCTCGCGTGGGTGACAG............................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................TTGGGTGACAAACTGTGAATG.................................................................. 21 1 2 0.50 1 0 0 1 0 0 0 0 0
....................................................................................TGGGTGACAGGTTGATTGGGTGA............................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................ACCGTCTCCTCGCAGATTTCT.............. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................CTCGGTGATAGAGACGAACGTTA............................................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................AATGGGTGACAGGTTGAT...................................................................................... 18 1 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................CCTTGGGTGACAAACCGTGAATG.................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0 0
....................GGTTCATAGCCATGTACGCCG................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...................CGGTTCATAGCCATGTACGC................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................GCATGGGTGACAGGTTGATTGGGTGA............................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................GCATGGGTGACAGGTTGATT..................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0
.....................................................................GAACGTTGTCTCGCATGGGTG................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................AGATGATAGAGACGAACGT............................................................................................................... 19 1 2 0.50 1 0 0 1 0 0 0 0 0
..............................................................................CTCGCATGGGTGACAGGTT......................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0 0 0
...................................................................................................................................................TAAAACCGTCTCCTCGCAGGT.................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................TCGCGTGGGTGACAGGTTGAT...................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................CCGTTGTCTCGAATGGGTGACA............................................................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0 0
......................................................CTCGATGATAGAGACGAACG................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................CTAGGGCGATTCTGAAACCGT.............................. 21 1 2 0.50 1 1 0 0 0 0 0 0 0
...........................................AAACTTCCATGCTCGATGAT........................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................ATGGGTGACAGGTTGATTG.................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0
.......................................................................ACGTTGTCTCGCATGGGTGA............................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................................................................TCTAGGGCGATTCTAGAACCGT.............................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................TACGTTGTCTCGCGTGGGTGA............................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................CAGGTTGATTGGGTGACAAA........................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................GTTGTCTCGCATGGGTGA............................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................CCGTCTCCTCGCAGATTTC............... 19 0 2 0.50 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................CTCGCAGGTTTCTTTGGTACA...... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................CGTCTCCTCGCAGATTTCTT............. 20 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................CCGCGGAACTTCCATGCTCGG............................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0
...ATATAGAGTGTGCCACCGGTTC................................................................................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................................GGTTGATTGGGTGGCAAACCG........................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.................................GTACGCCGCGAAACTTCCAT..................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................GTACGCCGCGGAACTTCCATG.................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................TCGCATGGGTGACAGGTTGA....................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................CCTCGCAGGTTTCTTTGGTA........ 20 1 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................ACATACATGTATCTAGGGCGA.......................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
................................TGTACGCCGCGAAACTTCCAT..................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................ATAGCCATGTACGCCGCGAAA............................................................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0
....................................................................................TCTCTGACAGGTTGATTGGGT................................................................................. 21 3 2 0.50 1 0 1 0 0 0 0 0 0
.................ACCGGTTCATAGCCATGTA...................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................GGTGACAGGTTGGTTGGGTGA............................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................GAACGTTGTCTCGCATGGGT................................................................................................. 20 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................AGACGAACGTTGTCTCGCGTG.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................CCGTGAATGTGTACATACAT....................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................TCCTCGCGGGTTTCTTTGGTA........ 21 2 3 0.33 1 1 0 0 0 0 0 0 0
......................................CCGCGGAACTTCCGTGCTCGG............................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................GGTTGGTTGGGTGACAAACT......................................................................... 20 2 4 0.25 1 1 0 0 0 0 0 0 0
............................GCCGTGTACGCCGCGGGACTT......................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
................................................................................CGCGTGGGTGGCAGGTTGGTT..................................................................................... 21 3 7 0.14 1 0 0 1 0 0 0 0 0
....................................................................CGACCGTTGGCTCGCAAGG................................................................................................... 19 3 10 0.10 1 0 0 1 0 0 0 0 0
..........................................................ATTGTAGAGACGAACGTCG............................................................................................................. 19 3 20 0.10 2 2 0 0 0 0 0 0 0
.........................GTAGCCGTGTACGCCGCGGA............................................................................................................................................. 20 3 15 0.07 1 0 0 0 1 0 0 0 0
.....................................................................................................................................CTCTAGTGCGGTTCTAAAA.................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_557:2862-3047 + dps_2078 TGGCATATCTCACACGGTGGCCAAGTATCGGTACATGCGGCGCTTTGAAGGTACGAGCTACTATCTCTGCTTGCAACAGAGCGTACCCACTGTCCAACTAACCCACTGTTTGG--------------------------CA---CTT-ACATAT--------------------------GT-ATGTACATAGATCCCGCTAAGATTTTGGCAGAGGAGCGTCTAAAGAAACCATGTCAGCGC
droPer2 scaffold_8:806174-806359 + TGGCATATCTCACACGGTGGCCAAGTATCGGTACATGCGGCGCTTTGAAGGTACGAGCTACTATCTCTGCTTGCAACAGAGCGTACCCACTGTCCAACTAACCCACTGTTTGA--------------------------CA---CTT-ACATAT--------------------------GT-ATGTACATAGATCCCGCTAAGATTTTGGCAGAGGAGCGTCTAAAGAAACCATGTCAGCGC
droWil2 scf2_1100000004521:2769224-2769388 + TGGCATGCTGCATACAGCAGCCAAGGTGACCTACATGCAAAGATTCGAAAGTAAGGGAC-------------TTC-----CCA--------------------------------CAAA--------------------------TA-AAATACATATGTACATATATTGTAAACATTTCTT-CATCTTTCAGATCCCGCACAAATTTTAAAAAAGGAACGCCTTAAAAAGCCCTGTAGACGA
droVir3 scaffold_12963:7100487-7100642 + GGGTGCTTCGCACACCGCTGCGAAGGCAACCTACCTGCGTCGCTTTGAGGGTGAGCTAG-------------CGC-----TTG--------------------------------CATT--TAAATGCATAA-TA----AA----TA-ATATTA------------------------A-CGTATATGTTTAGATCCGCGCAAAATATTGGCAGCGGAGCGCAATAAACGGCCCTGCAAGCGT
droMoj3 scaffold_6500:3824355-3824506 - AGGCATTTCACACACGGCTGCCAAGGCAACCTATATGCGTCGATTTGAAGGTACTGGGA-------------TAT-----TTA--------------------------------GTTA--AGC---AAAAA-ATA---TTTA-TTA-A---AT--------------------------TC-TATTTTTTAGATCCCAAAAAAGTTTTGGCTGTAGAGAGCACAAAAAAGCCATGCAAACGC
droGri2 scaffold_15252:10249275-10249433 + GGGCATTTCGCACACAGCTGCAAAAGCAACTTACATGCGGCAATTTGAGGGTGGGCTTTA---GTT------TTG-----TTT--------------------------------ATCT--TTAAGCTAAAA-ATA---AT----TTATA-ATT--------------------------TA-TTTATTTTAGATCCACGTAAAATATTGGCAGCGGAGCGCAAGAAAAAACCATGCAAACGT
droAna3 scaffold_12916:4643538-4643695 + TGGCATCGCCCACACAATTTGCAAAGCCAATTATGTGCTGCGCTTGAAAGGTAGGGACT-------------TCC-----CCG--------------------------------GAAA--ATATTCAAGGCCTGCC--TT---CTA-AAATGA--------------------------GT-TTAATTTTAGATCCAAGAACTGTATTGATGGAGGAACGCCTCAAGCAGCCTTGTCTGCGC
droBip1 scf7180000396737:121238-121395 - TGGCATCGCCCACACGATTTGCAAAACCAATTATTTGCGACGCCTAACAGGTAGGGACT-------------TCC-----CCT--------------------------------TAAA--ATCCTATGAGGCTGCC--AA---CTA-AAATGC--------------------------GT-TTTATTTTAGATCCAAGAACTGTCTTGGTAGAGGAACGTCTTAAGCAGCCTTGTTTGCGC
droKik1 scf7180000302405:415431-415594 + TGGCATTGCCCACACAATTGCAAGGGCCAATTATATGCGGAGATTCGACGGTAAATGCA-------------CCA-----TTT----------------------------AGATTCAT--ATATTCAGAG---------AT--TTA-AA-TGT-----------------TAAATTCA-CATACAAATGTAGATCCCAAAAGGATTCTGGAAGCGGAGCGCCTGAAAAAGCCATGTAAACGA
droFic1 scf7180000454155:386714-386867 + TGGAATATCTCACACAATTGCAAAAACGAATTACATGAGGCGATTTGAAGGTAAAACTT-------------CTC-----ATT--------------------------------GTTA--AAAATGGGTA--T-A---TTTA-TTA-GTAT----------------------------TG-AAATCTTTAGATCCCAAAAAGATCCTGGCTGAAGAGCGCCAGAAAGTGCCATGTAAGCGA
droEle1 scf7180000491273:2309131-2309290 - TGGCATCTCCCACACAATTGCGAAAACAAATTATATGCGCCGTTATGACGGTAATTATT-------------TCT-----CCA--------------------------------CACT--CTACACTAAAACTTCATAAT---TTA-AAATTA--------------------------AA-AAATATTTAGATCCCGAAAAGATATTGATCGAAGAACGAGCAAAAATACCATGTCAGCGA
droRho1 scf7180000776759:27215-27372 + TGGCATCTCCCACACAATTGCAAAAACAAATTATATGCGGCGTTATGATGGTAAGGATT-------------TAC-----CAT--T-----------------------------TTCAATAACT--AAATA-AAT--AAT---TTA-AAATTC--------------------------GA-AAATCTTTAGATCCCAAAAAGATATTGACCGAAGAGCGGCGAAAAATACCTTGTAATCGT
droBia1 scf7180000302188:684234-684388 - CGGCATTTCTCACACAATTGCCAAGACCAACTATATGAGACGTTATGAGGGTAAGAACC-------------TTT-----GTA--------------------------------AACA--ACACAAAGCA--T-A---AAT--TTA-ATATTT--------------------------AA-ATTATTATAGATCCCAAAAAGATTTTGGACGAAGAACGCAAGAAAACTCCTTGCAAGCGT
droTak1 scf7180000415264:189894-190049 - TGGTATTTCCCACACAATTGCAAAAACCAACTATATGAAGCGTTATGAGGGTAACAAGT-------------TTT-----ACA--------------------------------GTCT--TTAAAAAAATA-T-A---TTTT-CTA-AATTT---------------------------TA-TATATTTTAGATCCGAAAAAGATATTAACCGAAGAGCGCCGGAAAACGCCATGTAAGCGA
droEug1 scf7180000409005:36409-36567 - AGGTCTCTCCCACACTATTGCAAGGATCAACTATATGAAACGGTATGAGGGTAAGGACA-------------ATC-----TGA--A-----------------------------CTCC--ATAAACAAGTA-T-T---TTTACCAA-AAAATC--------------------------GA-AAATCTTTAGATCCCAAAAAGGTTTTAAACGAAGAGCATCGGAAAGCGCCATGTAAACGA
dm3 chr2L:1170314-1170468 + TGGTATTGCACACGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGGTAAAGCTT-------------TTG-----TTG--------------------------------CACG--ATATTCCCGAA-AA----AG---CTG-AATTTT--------------------------CA-ATATTTGTAGATCCCAAAAAGATTTTGACTGAAGAGCGGCAGAAAACTCCTTGCAAGCGA
droSim2 2l:1117811-1117964 + TGGCATTGCACACGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGGTAAGGCTT-------------TTG-----GTG--------------------------------CACG--AAATCCCCGA--AA----AG---CTCAAT-TTT--------------------------CA-AAATTTGTAGATCCGAAAAAGATTTTGACTGAAGAACGGCAGAAAACTCCCTGCAAGCGA
droSec2 scaffold_14:1130399-1130553 + TGGCATTGCACACGCAATTGCAAAGAGCAACTTTTTGAAGCGTTACGAGGGTAAGGCTT-------------TTG-----GTG--------------------------------CACG--AAATCCCCGAA-AA----AG---CTCAAT-TTT--------------------------CA-AATTTTGTAGATCCGAAAAAGATTTTGACTGAAGAACGGCAGAAAACTCCCTGCAAGCGA
droYak3 2L:1149985-1150141 + TGGTATTTCACACACAATAGCAAAGGCCAATTATATGAAGCGTTACGAGAGTAAGCTTT-------------TTG-----GTG--------------------------------CACG--ATATCCAACAA-AAC--AGAT--CTA-AT-TTT--------------------------TA-AAAATTATAGATCCCAAGAAGATCTTGACTGAAGAGCGCCAGAAAACTCCCTGCAAGCGA
droEre2 scaffold_4929:1214987-1215143 + TGGCATTTCACACACAATCGCCAAGACCAATTATATGAAGCGTTACGAGAGTAAGCTAT-------------TTG-----GTT--------------------------------CAAG--ATATGCTACAA-AA----AC---CTTAAT-TTT------------------------TTTT-TAAATTTTAGGTCCCAAAAAAATTTTGACTGAAGAGCGCCAGAAAACTCCTTGCAAACGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGGCATATCTCACACGGTGGCCAAGTATCGGTACATGCGGCGCTTTGAAGGTACGAGCTACTATCTCTGCTTGCAACAGAGCGTACCCACTGTCCAACTAACCCACTGTTTGG--------------------------CA---CTT-ACATAT--------------------------GT-ATGTACATAGATCCCGCTAAGATTTTGGCAGAGGAGCGTCTAAAGAAACCATGTCAGCGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................TCGGTACATGCGGCGCTTTGA...................................................................................................................................................................................................2124.0080200000060
.......................................................................................................................................................................................................CTAAGATTTTGGCAGAGGAGC.......................2124.0080201000050
..................................ATGCGGCGCTTTGAAGGTACG............................................................................................................................................................................................2123.5071200001030
......................AAGTATCGGTACATGCGGCGC........................................................................................................................................................................................................2122.5050300001010
TGGCATATCTCACACGGTGGC..............................................................................................................................................................................................................................2122.5050500000000
........................................................................................................................................................................................................TAAGATTTTGGCAGAGGAGC.......................2022.0040100002010
........................................................................................................................................................................................................TAAGATTTTGGCAGAGGAGCG......................2122.0040300000010
........................................................................................................................................................AT--------------------------GT-ATGTACATAGATCCCGC...........................................2122.0040400000000
.....................CAAGTATCGGTACATGCGGCG.........................................................................................................................................................................................................2122.0040300000010
...........................................................................................................................................................................................................GATTTTGGCAGAGGAGCGTC....................2021.5030000000030
............CACGGTGGCCAAGTATCGGTA..................................................................................................................................................................................................................2121.5030200000010
.............................................................................AGAGCGTACCCACTGTCCAAC.................................................................................................................................................2121.5030300000000
......................AAGTATCGGTACATGCGGCG.........................................................................................................................................................................................................2021.0020000000020
..............................................................................................................................................................................................................TTTGGCAGAGGAGCGTCTAA.................2021.0021100000000
....ATATCTCACACGGTGGCCAAG..........................................................................................................................................................................................................................2121.0020100001000
..........................................................................................................................................................................................................AGATTTTGGCAGAGGAGC.......................1821.0020100100000
....................CCAAGTATCGGTACATGCGG...........................................................................................................................................................................................................2021.0020100000010
.....................CAAGTATCGGTACATGCGGCGT........................................................................................................................................................................................................2221.0020000000200
.............................................................................................................................................................................................................................TCTAAAGAAACCATGTCAGCG.2121.0020200000000
....................................................ACGAGCTACTATCTCTGCTTG..........................................................................................................................................................................2121.0020100000010
.....................................CGGCGCTTTGAAGGTACGAGC.........................................................................................................................................................................................2121.0020000002000
..........................................................................................................................................................................................................AGATTTTGGCAGAGGAGCGT.....................2021.0020200000000
.......................AGTATCGGTACATGCGGCGCT.......................................................................................................................................................................................................2121.0020200000000
..........................ATCGGTACATGCGGCGCTTTG....................................................................................................................................................................................................2121.0020100000010
...........................................................................................................................................................................................................................CGTCTAAAGAAACCATGTCAG...2121.0020100001000
.........................................................................CAACAGAGCGTACCCACTGTC.....................................................................................................................................................2121.0020200000000
.....................................................................CTTGCAACAGAGCGTACCCAC.........................................................................................................................................................2121.0020100001000
.........................TATCGGTACATGCGGCGCTTT.....................................................................................................................................................................................................2121.0020100001000
.....................CAAGTATCGGTACATGCGGC..........................................................................................................................................................................................................2021.0020100000010
.......................AGTATCGGTACATGCGGCGC........................................................................................................................................................................................................2021.0020200000000
...............................................................................................................................................................................................................TTGGCAGAGGAGCGTCTAAAG...............2121.0020200000000
.........................................................................................................................................................................................................AAGATTTTGGCAGAGGAGCG......................2021.0020100001000
........................................................................................ACTGTCCAACTAACCCACTGT......................................................................................................................................2121.0020200000000
..........................................................TACTATCTCTGCTTGCAACA.....................................................................................................................................................................2021.0020200000000
............................CGGTACATGCGGCGCTTT.....................................................................................................................................................................................................1821.0020200000000
............................................................................................................................................................................................................ATTTTGGCAGAGGAGCGTC....................1921.0020200000000
...................................TGCGGCGCTTTGAAGGTACG............................................................................................................................................................................................2021.0020000000020
............................CGGTACATGCGGCGCTTTGA...................................................................................................................................................................................................2021.0020200000000
...................GCCAAGTATCGGTACATGCGG...........................................................................................................................................................................................................2121.0020200000000
..............................GTACATGCGGCGCTTTGAAGG................................................................................................................................................................................................2121.0020100001000
............................................................................CAGAGCGTACCCACTGTCCAA..................................................................................................................................................2121.0020100000010
.......................................................................................................CACTGTTTGG--------------------------CA---CTT-ACATAT--------------------------...............................................................2120.5010100000000
................................ACATGCGGCGCTTTGAAGG................................................................................................................................................................................................1920.5010000000010
.......................................................................................................................................................................................................................GGAGCGTCTAAAGAAACCATG.......2120.5010100000000
...................................................................................TACCCACTGTCCAACTAACCC...........................................................................................................................................2120.5010100000000
.........................................................................................................................................................................................................AAGATTTTGGCAGAGGAGCGT.....................2120.5010100000000
....................CCAAGTATCGGTACATGCGGC..........................................................................................................................................................................................................2120.5010100000000
.......................................................................................................................................................................................................CTAAGATTTTGGCAGAGGAA........................2020.5010000000010
...........ACACGGTGGCCAAGTATCGGT...................................................................................................................................................................................................................2120.5010100000000
...........................................................................................GTCCAACTAACCCACTGTTTGG--------------------------C.......................................................................................................2320.5010100000000
.......................................................................TGCAACAGAGCGTACCCACTT.......................................................................................................................................................2120.5010000001000
..................GGCCAAGTATCGGTACATGCGGCGCT.......................................................................................................................................................................................................2620.5010100000000
..........................................................................................................................................................................................TACATAGATCCCGCTAAGATTCC..................................2320.5010001000000
...CATATCTCACACGGTGGCCAA...........................................................................................................................................................................................................................2120.5010100000000
...........................TCGGTACATGCGGCGCTTTG....................................................................................................................................................................................................2020.5010100000000
.........................TATCGGTACATGCGGCGCTTTG....................................................................................................................................................................................................2220.5010000000010
..........................................................................................................................................................................................................AGATTTTGGCAGAGGAGCG......................1920.5010000000001
.........................TATCGGTACATGCGGCGCTTC.....................................................................................................................................................................................................2120.5010000000010
.....................................................................................................................................................................................T-ATGTACATAGATCCCGCTAA........................................2120.5010100000000
.......................................................................................................................................................................................................CTAAGATTTTGGCAGAGGAGG.......................2120.5010100000000
.......................................................................................................................................................................................................................GGAGCGTCTAAAGAAACCATGTCAGCG.2720.5010100000000
........................GTATCGGTACATGCGGCGCTTT.....................................................................................................................................................................................................2220.5010100000000
.........TCACACGGTGGCCAAGTATCGG....................................................................................................................................................................................................................2220.5010100000000
....................................................................................................................................................................................GT-ATGTACATAGATCCCGCT..........................................2020.5010100000000
...........................................................................ACAGAGCGTACCCACTGTCCA...................................................................................................................................................2120.5010000000010
.........................................................................................................................................................T--------------------------GT-ATGTACATAGATCCCGCT..........................................2120.5010100000000
................................................................................................ACTAACCCACTGTTTGG--------------------------CA---CT.................................................................................................2120.5010100000000
.........TCACACGGTGGCCAAGTATCGGTACA................................................................................................................................................................................................................2620.5010100000000
........................................................................................................................................................................................................TAAGATTTTGGCAGAGGAG........................1920.5010000001000
...............................................................................................AACTAACCCACTGTTTGG--------------------------CA---C..................................................................................................2120.5010100000000
............................CGGTACATGCGGCGCTTTGAA..................................................................................................................................................................................................2120.5010000000010
......................................................................................................................................................................................................GCTAAGATTTTGGCAGAGGAG........................2120.5010100000000
..................................ATGCGGCGCTTTGAAGGTA..............................................................................................................................................................................................1920.5010000000010
......................AAGTATCGGTACATGCGGC..........................................................................................................................................................................................................1920.5010000000010
.........TCACACGGTGGCCAAGTATCGGTAC.................................................................................................................................................................................................................2520.5010100000000
....................CCAAGTATCGGTACATGCGGCG.........................................................................................................................................................................................................2220.5010100000000
...........................TCGGTACATGCGGCGCTTTGAA..................................................................................................................................................................................................2220.5010000000010
....................................................................................................................................................................................GT-ATGTACATAGATCCCGCTT.........................................2120.5010100000000
............CACGGTGGCCAAGTATCGG....................................................................................................................................................................................................................1920.5010100000000
TGGCATATCTCACACGGTGG...............................................................................................................................................................................................................................2020.5010000001000
...........................................................................................................................................................................................................GATTTTGGCAGAGGAGCGT.....................1920.5010100000000
........................GTATCGGTACATGCGGCGCTC......................................................................................................................................................................................................2120.5010000000010
..................GGCCAAGTATCGGTACATGCGGCGC........................................................................................................................................................................................................2520.5010100000000
............................................................................................................................................................................................................................GTCTAAAGAAACCATGTCAG...2020.5010100000000
................................ACATGCGGCGCTTTGAAGGT...............................................................................................................................................................................................2020.5010010000000
...............................................................................AGCGTACCCACTGTCCAACTCCA.............................................................................................................................................2320.5010100000000
....................................................................................................................................................................................................CCGCTAAGATTTTGGCAGAGG..........................2120.5010100000000
..........................................................TACTATCTCTGCTTGCAACAGAGCGT...............................................................................................................................................................2620.5010100000000
............................................................................................................................................................................................................ATTTTGGCAGAGGAGCGTCTA..................2120.5010100000000
.......................AGTATCGGTACATGCGGC..........................................................................................................................................................................................................1820.5010100000000
.........................................................CTACTATCTCTGCTTGCAACG.....................................................................................................................................................................2120.5010100000000
......ATCTCACACGGTGGCCAAGT.........................................................................................................................................................................................................................2020.5010100000000
.......................................................................................................CACTGTTTGG--------------------------CA---CTT-ACATAT--------------------------C..............................................................2220.5010001000000
......ATCTCACACGGTGGCCAAGTA........................................................................................................................................................................................................................2120.5010000001000
...................................................................................................................................................................................................................CAGAGGAGCGTCTAAAGAAAC...........2120.5010100000000
.............................................TGAAGGTACGAGCTACTAT...................................................................................................................................................................................1920.5010000001000
....ATATCTCACACGGTGGCCAAGT.........................................................................................................................................................................................................................2220.5010000001000
.............ACGGTGGCCAAGTATCGGTACC................................................................................................................................................................................................................2220.5010100000000
...............................................................................................................................................................................................AGATCCCGCTAAGATTTTGG................................2020.5010100000000
.....................................................................CTTGCAACAGAGCGTACCCACT........................................................................................................................................................2220.5010100000000
................................ACATGCGGCGCTTTGAAGA................................................................................................................................................................................................1920.5010000000010
.....................................................................................................................................................................................................................GAGGAGCGTCTAAAGAAACC..........2020.5010100000000
.................................................................................................................................................................................................................GGCAGAGGAGCGTCTAAAGA..............2020.5010100000000
.........................TATCGGTACATGCGGCGCTTTC....................................................................................................................................................................................................2220.5010000000010
...............................................................................................................................................................................................................................TAAAGAAACCATGTCAGCGC2020.5010000000010
............................................................................................................................................................................................................ATTTTGGCAGAGGAGCGTCTAAAG...............2420.5010100000000
...........................................................................................................................................................................................ACATAGATCCCGCTAAGATTTT..................................2220.5010000001000
...........................TCGGTACATGCGGCGCTTT.....................................................................................................................................................................................................1920.5010100000000
.....................................................................CTTGCAACAGAGCGTACCCA..........................................................................................................................................................2020.5010000001000
.........................................................................................................................................................................................................AAGATTTTGGCAGAGGAGC.......................1920.5010100000000
................................................................................................................G--------------------------CA---CTT-ACATAT--------------------------GT-ATGTACA.....................................................2120.5010100000000
.................................................................................................................................................................................................ATCCCGCTAAGATTTTGGCAGA............................2220.5010100000000
...............................TACATGCGGCGCTTTGAAGA................................................................................................................................................................................................2020.5010100000000
...........................................................................................................................................................................................................GATTTTGGCAGAGGAGCGTCT...................2120.5010100000000
..........................ATCGGTACATGCGGCGCTTT.....................................................................................................................................................................................................2020.5010000000010
..........................ATCGGTACATGCGGCGCTTC.....................................................................................................................................................................................................2020.5010001000000
..................................ATGCGGCGCTTTGAAGGTAC.............................................................................................................................................................................................2020.5010000000010
..............................................................................GAGCGTACCCACTGTCCAACT................................................................................................................................................2120.5010100000000
........CTCACACGGTGGCCAAGTATC......................................................................................................................................................................................................................2120.5010100000000
.................................CATGCGGCGCTTTGAAGGTACG............................................................................................................................................................................................2220.5010000000010
..................GGCCAAGTATCGGTACATGCG............................................................................................................................................................................................................2120.5010100000000
droPer2
TGGCATATCTCACACGGTGGCCAAGTATCGGTACATGCGGCGCTTTGAAGGTACGAGCTACTATCTCTGCTTGCAACAGAGCGTACCCACTGTCCAACTAACCCACTGTTTGA--------------------------CA---CTT-ACATAT--------------------------GT-ATGTACATAGATCCCGCTAAGATTTTGGCAGAGGAGCGTCTAAAGAAACCATGTCAGCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................AGATTTTGGCAGAGGAGC.......................1830.331001000
.............................................................................................................................................................................................................TTTTGGCAGAGGAGCGTCT...................1930.331000001
droWil2
TGGCATGCTGCATACAGCAGCCAAGGTGACCTACATGCAAAGATTCGAAAGTAAGGGAC-------------TTC-----CCA--------------------------------CAAA--------------------------TA-AAATACATATGTACATATATTGTAAACATTTCTT-CATCTTTCAGATCCCGCACAAATTTTAAAAAAGGAACGCCTTAAAAAGCCCTGTAGACGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GGGTGCTTCGCACACCGCTGCGAAGGCAACCTACCTGCGTCGCTTTGAGGGTGAGCTAG-------------CGC-----TTG--------------------------------CATT--TAAATGCATAA-TA----AA----TA-ATATTA------------------------A-CGTATATGTTTAGATCCGCGCAAAATATTGGCAGCGGAGCGCAATAAACGGCCCTGCAAGCGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................TTGAGGGTGAGCTAG-------------CGC-----TTG--------------------------------................................................................................................................................2112.002000000000000000000001000000000000000000000000000000000000000100
.............................................TGAGGGTGAGCTAG-------------CGC-----TTG--------------------------------C...............................................................................................................................2112.002000000000000000000000000000010100000000000000000000000000000000
..........CACACCGCTGCGAAGGCAACCTACC................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........CGCACACCGCTGCGAAGGC........................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.................................CCTGCGTCGCTTTGAGGA................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
AGGCATTTCACACACGGCTGCCAAGGCAACCTATATGCGTCGATTTGAAGGTACTGGGA-------------TAT-----TTA--------------------------------GTTA--AGC---AAAAA-ATA---TTTA-TTA-A---AT--------------------------TC-TATTTTTTAGATCCCAAAAAAGTTTTGGCTGTAGAGAGCACAAAAAAGCCATGCAAACGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............CACGGCTGCCAAGGCAAC.....................................................................................................................................................................................................................1811.001000010
droGri2
GGGCATTTCGCACACAGCTGCAAAAGCAACTTACATGCGGCAATTTGAGGGTGGGCTTTA---GTT------TTG-----TTT--------------------------------ATCT--TTAAGCTAAAA-ATA---AT----TTATA-ATT--------------------------TA-TTTATTTTAGATCCACGTAAAATATTGGCAGCGGAGCGCAAGAAAAAACCATGCAAACGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TGGCATCGCCCACACAATTTGCAAAGCCAATTATGTGCTGCGCTTGAAAGGTAGGGACT-------------TCC-----CCG--------------------------------GAAA--ATATTCAAGGCCTGCC--TT---CTA-AAATGA--------------------------GT-TTAATTTTAGATCCAAGAACTGTATTGATGGAGGAACGCCTCAAGCAGCCTTGTCTGCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................CAATTATGTGCTGCGCTTGAAAGA................................................................................................................................................................................................2411.001000001
droBip1
TGGCATCGCCCACACGATTTGCAAAACCAATTATTTGCGACGCCTAACAGGTAGGGACT-------------TCC-----CCT--------------------------------TAAA--ATCCTATGAGGCTGCC--AA---CTA-AAATGC--------------------------GT-TTTATTTTAGATCCAAGAACTGTCTTGGTAGAGGAACGTCTTAAGCAGCCTTGTTTGCGCSizeHit CountTotal NormTotal
No Reads
droKik1
TGGCATTGCCCACACAATTGCAAGGGCCAATTATATGCGGAGATTCGACGGTAAATGCA-------------CCA-----TTT----------------------------AGATTCAT--ATATTCAGAG---------AT--TTA-AA-TGT-----------------TAAATTCA-CATACAAATGTAGATCCCAAAAGGATTCTGGAAGCGGAGCGCCTGAAAAAGCCATGTAAACGASizeHit CountTotal NormTotal
No Reads
droFic1
TGGAATATCTCACACAATTGCAAAAACGAATTACATGAGGCGATTTGAAGGTAAAACTT-------------CTC-----ATT--------------------------------GTTA--AAAATGGGTA--T-A---TTTA-TTA-GTAT----------------------------TG-AAATCTTTAGATCCCAAAAAGATCCTGGCTGAAGAGCGCCAGAAAGTGCCATGTAAGCGASizeHit CountTotal NormTotal
No Reads
droEle1
TGGCATCTCCCACACAATTGCGAAAACAAATTATATGCGCCGTTATGACGGTAATTATT-------------TCT-----CCA--------------------------------CACT--CTACACTAAAACTTCATAAT---TTA-AAATTA--------------------------AA-AAATATTTAGATCCCGAAAAGATATTGATCGAAGAACGAGCAAAAATACCATGTCAGCGASizeHit CountTotal NormTotal
No Reads
droRho1
TGGCATCTCCCACACAATTGCAAAAACAAATTATATGCGGCGTTATGATGGTAAGGATT-------------TAC-----CAT--T-----------------------------TTCAATAACT--AAATA-AAT--AAT---TTA-AAATTC--------------------------GA-AAATCTTTAGATCCCAAAAAGATATTGACCGAAGAGCGGCGAAAAATACCTTGTAATCGTSizeHit CountTotal NormTotal
No Reads
droBia1
CGGCATTTCTCACACAATTGCCAAGACCAACTATATGAGACGTTATGAGGGTAAGAACC-------------TTT-----GTA--------------------------------AACA--ACACAAAGCA--T-A---AAT--TTA-ATATTT--------------------------AA-ATTATTATAGATCCCAAAAAGATTTTGGACGAAGAACGCAAGAAAACTCCTTGCAAGCGTSizeHit CountTotal NormTotal
No Reads
droTak1
TGGTATTTCCCACACAATTGCAAAAACCAACTATATGAAGCGTTATGAGGGTAACAAGT-------------TTT-----ACA--------------------------------GTCT--TTAAAAAAATA-T-A---TTTT-CTA-AATTT---------------------------TA-TATATTTTAGATCCGAAAAAGATATTAACCGAAGAGCGCCGGAAAACGCCATGTAAGCGASizeHit CountTotal NormTotal
No Reads
droEug1
AGGTCTCTCCCACACTATTGCAAGGATCAACTATATGAAACGGTATGAGGGTAAGGACA-------------ATC-----TGA--A-----------------------------CTCC--ATAAACAAGTA-T-T---TTTACCAA-AAAATC--------------------------GA-AAATCTTTAGATCCCAAAAAGGTTTTAAACGAAGAGCATCGGAAAGCGCCATGTAAACGASizeHit CountTotal NormTotal
No Reads
dm3
TGGTATTGCACACGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGGTAAAGCTT-------------TTG-----TTG--------------------------------CACG--ATATTCCCGAA-AA----AG---CTG-AATTTT--------------------------CA-ATATTTGTAGATCCCAAAAAGATTTTGACTGAAGAGCGGCAGAAAACTCCTTGCAAGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................AAAAGATTTTGACTGAAGAGC.......................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATTGCAAAGAGCAACTATTTG..............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AACTATTTGAAGCGTTACGAG..................................................................................................................................................................................................2112.0020000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ATTTTGACTGAAGAGCGGCAG..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
..........CACGCAATTGCAAAGAGCAA.....................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AAAGATTTTGACTGAAGAGCGGC....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGAAGCGTTACGAGGGTAAAG...........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
............CGCAATTGCAAAGAGCAACTA..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................TATTTGAAGCGTTACGAGGGTG..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAGAAAACTCCTTGCAAGCGA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAAAAAGATTTTGACTGAAGA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TG-AATTTT--------------------------CA-ATATTTGTAGAA................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ATTTT--------------------------CA-ATATTTGTAGATC...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATTTGAAGCGTTACGAGGGTA..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................AGAGCGGCAGAAAACTCCTTGCAAGCGA2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TTTTGACTGAAGAGCGGC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................AAGATTTTGACTGAAGAGCGG.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CTGAAGAGCGGCAGAAAACTC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................AGATTTTGACTGAAGAGCGGC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................AGGGTAAAGCTT-------------TTG-----TTG--------------------------------CAC.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................ATTTTGACTGAAGAGCG......................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAGCGTTACGAGGGTAAAG...........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................TTGAAGCGTTACGAGGGTAA.............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTGAAGCGTTACGAGGGTA..............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CTGAAGAGCGGCAGAAAACT............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................CACG--ATATTCCCGAA-AA----AG---CT.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................CG--ATATTCCCGAA-AA----AG---CTG-A..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACACGCAATTGCAAAGAGCAA.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................TGCAAAGAGCAACTATTTG..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................TTCCCGAA-AA----AG---CTG-AATTTT--------------------------C..............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGCATTGCACACGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGGTAAGGCTT-------------TTG-----GTG--------------------------------CACG--AAATCCCCGA--AA----AG---CTCAAT-TTT--------------------------CA-AAATTTGTAGATCCGAAAAAGATTTTGACTGAAGAACGGCAGAAAACTCCCTGCAAGCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................TTGACTGAAGAACGGCAGAAAACTCCC.........2713.00300000010000002000
........................................................................................................................................................................................................AAAGATTTTGACTGAAGAACGGCAGAAAA..............2912.00200000000000002000
...............................................................................................................................................................................................................TTGACTGAAGAACGGCAGAAAACTC...........2511.00100000000000010000
..............................................................................................................................................................................................................TTTGACTGAAGAACGGCAGAAAACTC...........2611.00100000000000010000
...............................................................................................................................................................................................................TTGACTGAAGAACGGCAGAA................2011.00100000000000001000
............................................................................................................................................................................................................ATTTTGACTGAAGAACGG.....................1811.00110000000000000000
................................................................................................................................................................................................................TGACTGAAGAACGGCAGAA................1911.00100000000000001000
.......................................................................................................................................................................................................AAAAGATTTTGACTGAAGAACGGCAGA.................2711.00100000000000010000
................................................................................................................................................................................................................TGACTGAAGAACGGCAGAAAACT............2311.00100000000000001000
..............................................................................................................................................................................................................TTTGACTGAAGAACGGCAGAAAACTCC..........2711.00100000000000010000
................................................................................................................................................................................................................TGACTGAAGAACGGCAGAAAACTCAA.........2611.00100000000000010000
..............................................................................................................................................................................................................TTTGACTGAAGAACGGCAGAAAACTCAA.........2811.00100000000000010000
...............................................AGGGTAAGGCTT-------------TTG-----GTA--------------------------------T...............................................................................................................................1930.33100000000000001000
droSec2
TGGCATTGCACACGCAATTGCAAAGAGCAACTTTTTGAAGCGTTACGAGGGTAAGGCTT-------------TTG-----GTG--------------------------------CACG--AAATCCCCGAA-AA----AG---CTCAAT-TTT--------------------------CA-AATTTTGTAGATCCGAAAAAGATTTTGACTGAAGAACGGCAGAAAACTCCCTGCAAGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................ACTGAAGAACGGCAGAAAACTCCCTGC......2711.0011000
....................................................................................................................................................................................................................TGAAGAACGGCAGAAAAC.............1811.0010001
droYak3
TGGTATTTCACACACAATAGCAAAGGCCAATTATATGAAGCGTTACGAGAGTAAGCTTT-------------TTG-----GTG--------------------------------CACG--ATATCCAACAA-AAC--AGAT--CTA-AT-TTT--------------------------TA-AAAATTATAGATCCCAAGAAGATCTTGACTGAAGAGCGCCAGAAAACTCCCTGCAAGCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TGGCATTTCACACACAATCGCCAAGACCAATTATATGAAGCGTTACGAGAGTAAGCTAT-------------TTG-----GTT--------------------------------CAAG--ATATGCTACAA-AA----AC---CTTAAT-TTT------------------------TTTT-TAAATTTTAGGTCCCAAAAAAATTTTGACTGAAGAGCGCCAGAAAACTCCTTGCAAACGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:57 AM