ID:

dps_2060

 Coordinate:

Unknown_group_524:8826-8921 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.2 -6.7 -6.6

Flybase annnotation

exon [dpse_GLEANR_11761:1]; CDS [Dpse\GA23197-cds]; CDS [Dpse\GA23197-cds]; exon [dpse_GLEANR_11761:2]; intron [Dpse\GA23197-in]

No Repeatable elements found

mature
  1. dps_2055  Unknown_group_524:4216-4241 -
  2. dps_2060  Unknown_group_524:8888-8913 -
  3. Unknown_group_621:4129-4154 +
  4. Unknown_group_621:6249-6274 +
  5. Unknown_group_621:8325-8350 +
  6. dps_2122  Unknown_group_621:10618-10643 +
  7. dps_2137  Unknown_group_621:20279-20304 +
  8. Unknown_group_621:29075-29100 -
  9. dps_2153  Unknown_group_621:34293-34318 -
star
  1. dps_2616  XL_group1e:1163383-1163406 +
  2. dps_2055  Unknown_group_524:4185-4208 -
  3. dps_2060  Unknown_group_524:8857-8880 -
  4. Unknown_group_621:8358-8381 +
  5. dps_2137  Unknown_group_621:20312-20335 +
  6. Unknown_group_621:23838-23861 -
  7. Unknown_group_621:29044-29067 -
  8. dps_2153  Unknown_group_621:34262-34285 -

Sense Strand Reads

------------------------------------##############------------------------------------------------------------------------------------------------##################################################
GAGCAGCAGACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTACTGTTTACTGTTTACATCCGTAAACACTTGTAATTCTGTTGTGGCATTTTCTTTTGTGGCTTGGCTCCCCGCTCCCTTGTAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC
**********************************************************.(((((((((((((...........)))))))...))))))................********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 M022
male body		 M062
head
 GSM444067
head
 SRR902012
CNS imaginal disc
............TGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 0 10 34.20 342 227 98 9 1 7 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACA........... 26 0 14 26.21 367 357 2 5 2 0 0 0 1 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGC... 26 0 12 22.00 264 180 74 6 0 2 1 0 1 0 0
...........................TGCACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 24 0 10 16.90 169 164 0 1 3 0 1 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 27 0 9 15.44 139 125 11 1 1 1 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTG...... 25 0 14 11.00 154 145 4 3 1 0 1 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAC............ 25 0 14 10.14 142 125 0 17 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTG.................................................................................................................................................. 23 0 10 9.90 99 98 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACA......... 28 0 14 8.71 122 118 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACAC........ 29 0 14 6.79 95 89 0 5 1 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAC.......... 27 0 14 6.50 91 83 0 6 2 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCA............. 24 0 14 6.43 90 86 0 2 1 0 1 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGG................................................................................................................................................................ 24 0 10 5.10 51 37 9 0 0 5 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCT................................................................................................................................................... 22 0 10 5.00 50 50 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGC......................................................................................................................................................... 22 0 11 4.91 54 39 3 1 7 0 4 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTC....................................................................................................................................................... 24 0 11 4.73 52 46 2 2 1 0 0 1 0 0 0
...........................TGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 21 0 10 4.10 41 41 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGG.......................................................................................................................................................... 21 0 11 4.09 45 41 0 0 3 1 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTGC... 28 0 12 4.00 48 41 2 5 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTC.............. 23 0 14 3.64 51 46 0 3 0 1 0 0 0 1 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTG.... 25 0 12 3.25 39 31 5 1 0 2 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGGT................................................................................................................................................ 25 0 10 2.90 29 29 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACA........... 25 0 14 2.50 35 34 1 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGTGG.......................................................................................................................................................... 25 0 10 2.20 22 19 1 0 0 0 0 0 0 0 2
........................................................................................................................................................................GAAAAAAGCCGCTCACACACTGTGC... 25 0 12 2.00 24 23 0 1 0 0 0 0 0 0 0
.............GGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 24 0 10 2.00 20 20 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGGCTC....................................................................................................................................................... 23 0 11 1.91 21 20 1 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGGC......................................................................................................................................................... 21 0 11 1.82 20 12 3 0 2 0 2 0 0 1 0
......................TGTTTTGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 26 0 10 1.80 18 18 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGGAT.............................................................................................................................................................. 26 0 10 1.70 17 13 3 1 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCT........................................................................................................................................................ 23 0 11 1.55 17 16 0 1 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCG...................................................................................................................................................... 25 0 11 1.55 17 16 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACAC........ 23 0 14 1.50 21 16 5 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTG...... 23 0 14 1.50 21 20 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGT..... 26 0 14 1.43 20 16 3 1 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGTGGC......................................................................................................................................................... 26 0 10 1.40 14 8 1 2 2 0 1 0 0 0 0
...........ATGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 26 0 10 1.40 14 11 2 0 0 1 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCG................................................................................................................................................................. 23 0 10 1.30 13 12 0 1 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCGT..................................................................................................................................................... 26 0 10 1.30 13 13 0 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 23 0 10 1.30 13 13 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTG...... 24 0 14 1.29 18 17 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTG.... 27 0 12 1.17 14 11 2 1 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACAC.......... 26 0 14 1.14 16 16 0 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCTG.................................................................................................................................................. 22 0 10 1.10 11 11 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGGCTCG...................................................................................................................................................... 24 0 11 1.09 12 12 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTG........................................................................................................................................................... 20 0 11 1.09 12 10 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGC................ 25 0 13 1.00 13 8 4 1 0 0 0 0 0 0 0
..........................................................TAATTACTGTTTACTGTTTACATCCG................................................................................................................ 26 0 9 1.00 9 3 5 0 0 1 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGGCT........................................................................................................................................................ 22 0 11 0.91 10 9 0 0 0 0 1 0 0 0 0
...........................TGCACTCGGATGTGGCTCG...................................................................................................................................................... 19 0 11 0.91 10 10 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 25 0 10 0.90 9 8 0 0 1 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 27 0 10 0.90 9 9 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACT....... 24 0 14 0.86 12 8 3 1 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACA......... 27 0 14 0.86 12 12 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGG.......................................................................................................................................................... 20 0 11 0.82 9 6 0 1 1 1 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCAC............ 24 0 14 0.71 10 9 0 0 1 0 0 0 0 0 0
......CAGACATGGAATCAATTGTTTTGCAC.................................................................................................................................................................... 26 0 10 0.70 7 7 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGT..................................................................................................................................................... 20 0 10 0.70 7 7 0 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGTGGCT........................................................................................................................................................ 27 0 10 0.70 7 6 1 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGGG................................................................................................................................................ 25 1 10 0.70 7 7 0 0 0 0 0 0 0 0 0
.............GGAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 26 0 9 0.67 6 6 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGT..... 24 0 14 0.64 9 7 2 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCT................................................................................................................................................... 21 0 10 0.60 6 6 0 0 0 0 0 0 0 0 0
............TTGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 10 0.60 6 0 0 6 0 0 0 0 0 0 0
.............GGAATCAATTGTTTTGCACTCGG................................................................................................................................................................ 23 0 10 0.60 6 6 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCC.. 27 0 12 0.58 7 5 0 2 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACAC........ 28 0 14 0.57 8 7 0 1 0 0 0 0 0 0 0
.............................................................................................................................................TGTAGGTTACCTGGTGAATCAGGAT.............................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTG....................................................................................................................................................................... 17 0 12 0.50 6 0 5 0 0 1 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 26 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 22 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGTCT................................................................................................................................................... 23 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGGTGAATCAGGATCTGAAAAAAGC................... 25 0 13 0.46 6 2 2 0 0 1 1 0 0 0 0
...........ATGGAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 28 0 9 0.44 4 3 0 0 1 0 0 0 0 0 0
......................................................TGGGTAATTACTGTTTACTGTTTACA.................................................................................................................... 26 0 9 0.44 4 1 3 0 0 0 0 0 0 0 0
GAGCAGCAGACATGGAATCAATTGTTT......................................................................................................................................................................... 27 0 12 0.42 5 5 0 0 0 0 0 0 0 0 0
..GCAGCAGACATGGAATCAATTGTTT......................................................................................................................................................................... 25 0 12 0.42 5 5 0 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 24 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGTGGCTC....................................................................................................................................................... 28 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0
.....................................................TTGGGTAATTACTGTTTACTGTT........................................................................................................................ 23 0 10 0.40 4 0 4 0 0 0 0 0 0 0 0
..................CAATTGTTTTGCACTCGGATGTGG.......................................................................................................................................................... 24 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTC.................................................................................................................................................................. 22 0 10 0.40 4 2 0 2 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGTCTG.................................................................................................................................................. 24 0 10 0.40 4 3 0 0 1 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGGAA.............................................................................................................................................................. 26 1 10 0.40 4 2 0 2 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCCTCTGG................................................................................................................................................. 24 1 10 0.40 4 4 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGCTC.............. 27 0 13 0.38 5 4 1 0 0 0 0 0 0 0 0
.......................GTTTTGCACTCGGATGTGGC......................................................................................................................................................... 20 0 11 0.36 4 2 0 0 2 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTC....................................................................................................................................................... 20 0 11 0.36 4 3 0 0 0 0 0 1 0 0 0
........................TTTTGCACTCGGATGTGGCTCG...................................................................................................................................................... 22 0 11 0.36 4 2 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCT............... 22 0 14 0.36 5 4 0 1 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTC.............. 22 0 14 0.36 5 5 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAA.......... 27 1 14 0.36 5 5 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTGTGC... 27 0 12 0.33 4 4 0 0 0 0 0 0 0 0 0
.....................................TGTGGCTCGTCTGGTATTGG........................................................................................................................................... 20 0 13 0.31 4 3 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTC.............. 24 0 13 0.31 4 2 0 2 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCAAA................................................................................................................................................. 24 3 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.........ACATGGAATCAATTGTTTTGCACTCGG................................................................................................................................................................ 27 0 10 0.30 3 1 0 0 0 2 0 0 0 0 0
..............GAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 23 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGGCTCGT..................................................................................................................................................... 25 0 10 0.30 3 2 0 0 1 0 0 0 0 0 0
...........CTGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 26 1 10 0.30 3 2 0 0 0 1 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 22 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
................................................TGGTATTGGGTAATTACTGTTTA............................................................................................................................. 23 0 10 0.30 3 1 0 0 0 2 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTA.................................................................................................................................................. 23 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 23 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
...........................................................AATTACTGTTTACTGTTTAC..................................................................................................................... 20 0 11 0.27 3 0 0 0 0 3 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCG...................................................................................................................................................... 21 0 11 0.27 3 1 0 2 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCCCC.................................................................................................................................................... 21 2 11 0.27 3 0 1 0 0 0 2 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGT......................................................................................................................................................... 22 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTC....................................................................................................................................................... 19 0 11 0.27 3 2 0 0 0 0 0 1 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCA...................................................................................................................................................... 25 1 11 0.27 3 0 3 0 0 0 0 0 0 0 0
...CAGCAGACATGGAATCAATTGTTT......................................................................................................................................................................... 24 0 12 0.25 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCAC............ 26 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCA............. 25 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACAC........ 27 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCG................. 20 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACA......... 26 0 14 0.21 3 1 2 0 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCA............. 23 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGC................ 21 0 14 0.21 3 2 0 0 0 1 0 0 0 0 0
................ATCAATTGTTTTGCACTCGGATGTGGC......................................................................................................................................................... 27 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
......CAGACATGGAATCAATTGTTTTGCACTC.................................................................................................................................................................. 28 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCAA.................................................................................................................................................. 23 2 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCCTC.................................................................................................................................................... 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCCT..................................................................................................................................................... 26 1 10 0.20 2 1 0 0 1 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTT.................................................................................................................................................... 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...................................................TATTGGGTAATTACTGTTTACTG.......................................................................................................................... 23 0 10 0.20 2 0 0 0 0 2 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCTGGT................................................................................................................................................ 24 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTCGT..................................................................................................................................................... 23 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
............TGGTATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 10 0.20 2 1 0 1 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCA................................................................................................................................................... 22 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGT................................................................................................................................................. 24 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGGA................................................................................................................................................ 25 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTC.................................................................................................................................................... 20 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
................................................TGGTATTGGGTAATTACTGTTTACTG.......................................................................................................................... 26 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
..........CATGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 27 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.......................GTTTTGCACTCGGATGTGGCTCGTC.................................................................................................................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGGTA............................................................................................................................................... 26 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.......................GTTTTGCACTCGGATGTGGCT........................................................................................................................................................ 21 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...............AATCAATTGTTTTGCACTCGG................................................................................................................................................................ 21 0 11 0.18 2 0 0 0 0 2 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGAA......................................................................................................................................................... 21 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGA.......................................................................................................................................................... 20 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGGCTG.................................................................................................................................................. 23 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCG...................................................................................................................................................... 18 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCC...................................................................................................................................................... 25 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...................AATTGTTTTGCACTCGGA............................................................................................................................................................... 18 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTC....................................................................................................................................................... 21 0 11 0.18 2 0 0 1 0 0 0 1 0 0 0
...........................TGCACTCGGATGTGGCTC....................................................................................................................................................... 18 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TTAAAAAAGCCGCTCACACACTGTGC... 26 1 12 0.17 2 1 0 1 0 0 0 0 0 0 0
GAGCAGCAGACATGGAATCAATTGTT.......................................................................................................................................................................... 26 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCCG. 28 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GTGAAAAAAGCCGCTCACACACTGTGC... 27 1 12 0.17 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CTTGAAAAAAGCCGCTCACACACTGTGC... 28 2 12 0.17 2 0 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGAAAAAAAGCCGCTCACACACTGTGC... 27 3 12 0.17 2 1 0 0 1 0 0 0 0 0 0
GAGCAGCAGACATGGAATCAATTG............................................................................................................................................................................ 24 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCG................. 24 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CCTGGTGAATCAGGATCTGAAAAAAG.................... 26 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CTCAGGATCTGAAAAAAGCCGCTCACA........... 27 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
.....................................TGTGGCTCGTCTGGTATTGGG.......................................................................................................................................... 21 0 13 0.15 2 1 0 0 1 0 0 0 0 0 0
.......................................TGGCTCGTCTGGTATTGGGT......................................................................................................................................... 20 0 13 0.15 2 0 0 0 0 0 1 0 0 1 0
................................TCGGATGTGGCTCGTCTGGTATTGG........................................................................................................................................... 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACAC........ 24 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GAAAAAAGCCGCTCACACACTG...... 22 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGA..... 26 1 14 0.14 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGAGGATCTGAAAAAAGCCGCTCA............. 24 1 14 0.14 2 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACT......... 28 1 14 0.14 2 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACAC........ 21 0 14 0.14 2 0 0 1 1 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACA......... 22 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACACTG...... 26 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTT.............. 23 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACA........... 24 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACT........... 26 1 14 0.14 2 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................ATGAAAAAAGCCGCTCACACACTG...... 24 1 14 0.14 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................TACCTGGTGAATCAGGATCTG........................... 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAA............ 25 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCC............. 24 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACA........... 18 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTC.............. 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TACCTGGTGAATCAGGATCTGAAAAA...................... 26 0 14 0.14 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTGTAATTCTGTTGTGGCATTTTC................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGGATA............................................................................................................................................................. 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..........................................................TAATTACTGTTTACTGTTTACATCC................................................................................................................. 25 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCGCTCGGATG............................................................................................................................................................. 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..............GAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....................................................TTGGGTAATTACTGTTTACTGTTTACA.................................................................................................................... 27 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0
...........TTGGAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 28 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCTGATG............................................................................................................................................................. 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............TTGAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............TGGAATCAACTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................ATCAATTGTTTTGCACTCGGATGTGG.......................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGTTA................................................................................................................................................... 23 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............................ACTCGGATGTGGCTCGTCTGGT................................................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCCTC.................................................................................................................................................... 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........CATGGAATCAATTGTTTTGCACTC.................................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTTAAA............................................................................................................................................... 26 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGTGGCTT....................................................................................................................................................... 28 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGGAC.............................................................................................................................................................. 26 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
...........................TTCACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............................CACTCGGATGTGGCTCGTCTG.................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTCTGGT................................................................................................................................................ 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...................AATTGTTTTGCACTCGGATGT............................................................................................................................................................ 21 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGCA............................................................................................................................................................... 25 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
......CAGACATGGAATCAATTGTTTTGCACT................................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........GTGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...............AATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCCTC.................................................................................................................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGTTAA.............................................................................................................................................. 27 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCTGATGTGGCTCGTCTGG................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................CAATTGTTTTGCACTCGGATGT............................................................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TTCACTCGGATGTGGCTCGTCTGGT................................................................................................................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............TGGAAGCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
..........................ATGCACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................TGGTATTGGGTAATTACTGTTTACT........................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................ATTGTTTTGCACTCGGATGTG........................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............TTGTATCAATTGTTTTGCACTCGGAT.............................................................................................................................................................. 26 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0
............TGGAGTCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............AGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0
..........CATGGAATCAATTGTTTTGCACC................................................................................................................................................................... 23 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.........ACATGGAATCAATTGTTTTGCACTCGGA............................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTT.................................................................................................................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............................CACTCGGATGTGGCTCGTCTGG................................................................................................................................................. 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............................................TCTGGTATTGGGTAATTACTGTTT.............................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCCTCTCG................................................................................................................................................. 24 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
..................CAATTGTTTTGAACTCGGATG............................................................................................................................................................. 21 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCCGG................................................................................................................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCACTCGTA............................................................................................................................................................... 25 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
...................................................TATTGGGTAATTACTGTTTACTGTT........................................................................................................................ 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................................................TTGGGTAATTACTGTTTACTG.......................................................................................................................... 21 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................TGTGGCATTTTCTTTTGTGGCTTTTG................................................................... 26 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0
..........................................................TAATTACTGTTTACTGTTTAC..................................................................................................................... 21 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0
.......................................TGGCTCGTCTGGTATTGGGTAATTAC................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGT............................................................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTGGGA............................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
......................................................TGGGTAATTACTGTTTACTGTT........................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............GTAATCAATTGTTTTGCACTCGGATG............................................................................................................................................................. 26 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
...................AATTGTTTTGCACTCGGATG............................................................................................................................................................. 20 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0
...........................TGCACTCGGACGTGGCTCGTCTGG................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCGTCT................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................TTGCATTGGGTAATTACTGTTTACC........................................................................................................................... 25 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTGCAC.................................................................................................................................................................... 20 0 10 0.10 1 0 0 0 0 0 0 0 1 0 0
.................TCAATTGTTTTGCACTCGGATGTGAAA........................................................................................................................................................ 27 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.......AGACATGGAATCAATTGTTTTGCACT................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCCT..................................................................................................................................................... 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTCTT.................................................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTCCTCCT.................................................................................................................................................. 26 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTCT................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...................AATTGTTTTGCACTCGGATGTGGC......................................................................................................................................................... 24 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0
............TGGAATCAATTGTTTTCCACTCGGA............................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........ATCGAATCAATTGTTTTGCACTC.................................................................................................................................................................. 23 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0
...........................TGCACTCGGATGTGGCTCGTCTGA................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTTTT.................................................................................................................................................. 23 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................TGGTATTGGGGAATTACTGTTTACGG.......................................................................................................................... 26 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
...........................TGCACTCGCATGTGGCTCGTCTGGTA............................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGATCGTCTGG................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........ATGGAATCAATTGTTTTGCACGCGGG............................................................................................................................................................... 26 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
............................GCACTTGGATGTGGCTCGTCTGG................................................................................................................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGTCTTG................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTCTAAA................................................................................................................................................ 27 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........ATGGAATCAATTGTTTTGCACTCGGAT.............................................................................................................................................................. 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................................................TTGGGTAATTACTGTTTACTGT......................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCTTG................................................................................................................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGATGTG........................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................................................GTATTGGGTAATTACTGTTTA............................................................................................................................. 21 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0
................................................TGGTATTGGGTAATTACTGTTTACTA.......................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................CAATTGTTTTGCACTCGGATGTGGCT........................................................................................................................................................ 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGGGTGTGG.......................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGTCTGT................................................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................GCACTCGGATGTGGCTCGTCTGGTA............................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCTCGTCTGT................................................................................................................................................. 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............GTAATCAATTGTTTTGCACTCGGAT.............................................................................................................................................................. 25 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTCCCCC................................................................................................................................................... 25 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0
..............................................TCTGGTATTGGGTAATTACAAA................................................................................................................................ 22 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCGC..................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGGCTCCCC.................................................................................................................................................... 26 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTCGGC.................................................................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................TGTTTTGCACTCGGATGTGAC......................................................................................................................................................... 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGTTGTG........................................................................................................................................................... 20 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0
.................TCAATTGTTTTGCACTCGG................................................................................................................................................................ 19 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0
..........................TTGCACTCGGATGTGGCTCGG..................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCCCCTG.................................................................................................................................................. 23 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0
..................CAATTGTTTTGCACTCGGAT.............................................................................................................................................................. 20 0 11 0.09 1 0 0 0 0 0 0 0 1 0 0
...........................TGCACTCGGATGTGGCTCGCTTGGTG............................................................................................................................................... 26 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0
............TGGAATCACTTGTTTTGCACTCGGA............................................................................................................................................................... 25 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
...........................TGCACTCGGATGTGGCTCGCCTG.................................................................................................................................................. 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGA.......................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCTCCC..................................................................................................................................................... 23 2 11 0.09 1 0 0 0 0 0 0 1 0 0 0
.....................TTGTTTTGCACTCGGATGTGGAA........................................................................................................................................................ 23 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...............................................................ACTGTTTACTGTTTACATCCG................................................................................................................ 21 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0
......................TGCTTTGCACTCGGATGTGG.......................................................................................................................................................... 20 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.......................GTTTTGCACTCGGATGTGG.......................................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.........................TTTGCACTCGGATGTGGCT........................................................................................................................................................ 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........................TTTTGAACTCGGATGTGGC......................................................................................................................................................... 19 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0
........................TTTTGCACTCGGATGTGG.......................................................................................................................................................... 18 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACCCGGATGTGGCT........................................................................................................................................................ 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
............TGCAAGCAATTGTTTTGCACTCGGA............................................................................................................................................................... 25 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.....................TGGTTTTGCACTCGGATGTGGCTCC...................................................................................................................................................... 25 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.........................CTTGCACTCGGATGTGGCTCG...................................................................................................................................................... 21 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0
.......................GTTTTGCACTCGGATGTGGCTC....................................................................................................................................................... 22 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.............................CACTCGGATGTGGCTCGCCTGG................................................................................................................................................. 22 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................TTGTTTTGCACTCGGATGTGGCTCCCC.................................................................................................................................................... 27 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGCT........................................................................................................................................................ 20 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...........................TGCGCTCGGATGTGGCTCGTCT................................................................................................................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........................TTTTGCACTCGGATGTGGC......................................................................................................................................................... 19 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CTCGTCGTCTGTACCTTAGTTAACAAAACGTGAGCCTACACCGAGCAGACCATAACCCATTAATGACAAATGACAAATGTAGGCATTTGTGAACATTAAGACAACACCGTAAAAGAAAACACCGAACCGAGGGGCGAGGGAACATCCAATGGACCACTTAGTCCTAGACTTTTTTCGGCGAGTGTGTGACACGGCG
*********************************************************************************.(((((((((((((...........)))))))...))))))................********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 M059
embryo
 GSM343916
embryo
 M022
male body		 GSM444067
head
 M062
head
 SRR902010
ovaries
.............................................................................................................................ACCGAGGGGCGAGGGAACATCC................................................. 22 0 2 0.50 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................GGACCACTTAGTCCTAGACTTTTTT..................... 25 0 14 0.43 6 3 2 0 0 0 0 0 0 1
..................................................................................................................................................CAATGGACCACTTAGTCCTAGAC........................... 23 0 14 0.43 6 6 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGGCGAGTGTGTGACACGGC. 20 0 12 0.42 5 0 1 4 0 0 0 0 0 0
CTCGTCGTCTGTACCTTAGTTA.............................................................................................................................................................................. 22 0 12 0.33 4 4 0 0 0 0 0 0 0 0
...............................................................................TAGGCATTTGTGAACATTAAGACAA............................................................................................ 25 0 9 0.33 3 0 0 2 0 0 1 0 0 0
.............................................................AATGACAAATGACAAATGTAGGCAT.............................................................................................................. 25 0 10 0.30 3 0 3 0 0 0 0 0 0 0
........................................................................................................................................................ACCACTTAGTCCTAGACTTTTTT..................... 23 0 14 0.29 4 4 0 0 0 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGC................................................................................................................ 20 0 11 0.27 3 0 3 0 0 0 0 0 0 0
........................................CCGAGCAGACCATAACCCAT........................................................................................................................................ 20 0 11 0.27 3 0 2 1 0 0 0 0 0 0
.......................................................................................TGTGAACATTAAGACAACACCGTAAAAG................................................................................. 28 0 8 0.25 2 0 0 0 2 0 0 0 0 0
.................................................................................................AAGACAACACCGTAAAAGAAAACACCGA....................................................................... 28 0 8 0.25 2 0 2 0 0 0 0 0 0 0
..AGTCGTCTGTACCTTAGTTAA............................................................................................................................................................................. 21 1 12 0.25 3 0 3 0 0 0 0 0 0 0
.........................................................................................................................................................CCACTTAGTCCTAGACTTTTTTCG................... 24 0 13 0.23 3 2 1 0 0 0 0 0 0 0
.................................................................................................................................................CCAATGGACCACTTAGTCCTAGAC........................... 24 0 14 0.21 3 2 0 0 0 0 0 0 1 0
.........................................................................................................................................................CCACTTAGTCCTAGACTTTTT...................... 21 0 14 0.21 3 2 0 0 1 0 0 0 0 0
.......................................................................................................................................................GACCACTTAGTCCTAGACTTTTTT..................... 24 0 14 0.21 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCACTTAGTCCTAGACTTTTTT..................... 22 0 14 0.21 3 3 0 0 0 0 0 0 0 0
.....................................ACACCGAGCAGACCATAACCCATTAAT.................................................................................................................................... 27 0 10 0.20 2 0 0 2 0 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGCAT.............................................................................................................. 22 0 11 0.18 2 0 2 0 0 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGCA............................................................................................................... 21 0 11 0.18 2 0 2 0 0 0 0 0 0 0
....................................TACACCGAGCAGACCATAACC........................................................................................................................................... 21 0 13 0.15 2 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................TTAGTCCTAGACTTTTTTCGGCGAGT............. 26 0 13 0.15 2 0 2 0 0 0 0 0 0 0
......................................................................................................................................................GGACCACTTAGTCCTAGACTTTTTTCG................... 27 0 13 0.15 2 2 0 0 0 0 0 0 0 0
..................................CCTACACCGAGCAGACCATAACCC.......................................................................................................................................... 24 0 13 0.15 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................GACCACTTAGTCCTAGACTTTTTTCG................... 26 0 13 0.15 2 2 0 0 0 0 0 0 0 0
................................AGCCTACACCGAGCAGACCAT............................................................................................................................................... 21 0 13 0.15 2 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................GACTTTTTTCGGCGAGTGT........... 19 0 14 0.14 2 0 1 1 0 0 0 0 0 0
....................................................................................................................................................ATGGACCACTTAGTCCTAGAC........................... 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0
..............................................................................GTAGGCATTTGTGAACATTAAGA............................................................................................... 23 0 9 0.11 1 0 0 0 0 0 1 0 0 0
...........................................................ATAATGACAAATGACAAATGTAGGCAT.............................................................................................................. 27 1 9 0.11 1 0 1 0 0 0 0 0 0 0
.............................................CAGACCATAACCCGTTAATGA.................................................................................................................................. 21 1 10 0.10 1 0 0 0 1 0 0 0 0 0
..............CTTAGTTAACAAAACGTGAGCCT............................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................................................AATGACAAATGACAAATGTAGGCATT............................................................................................................. 26 0 10 0.10 1 0 1 0 0 0 0 0 0 0
.........................AAACGTGAGCCTACACCGAGCAGACCAT............................................................................................................................................... 28 0 10 0.10 1 0 0 1 0 0 0 0 0 0
..........................AACGTGAGCCTACACCGAGCAGA................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0
........CTGTACCTTAGTTAACAAAACGTGAG.................................................................................................................................................................. 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0
...........................ACGTGAGCCTACACCGAGCAGACCA................................................................................................................................................ 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................GTGAGCCTACACCGAGCAGAC.................................................................................................................................................. 21 0 10 0.10 1 0 0 1 0 0 0 0 0 0
.............CCTTAGTTAACAAAACGTGAGCC................................................................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................GAGCAGACCATAACCCATTAATGACAAAT............................................................................................................................. 29 0 10 0.10 1 0 0 1 0 0 0 0 0 0
.............CCTTAGTTAACAAAACGTGAGCCT............................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.........................AAACGTGAGCCTACACCGAGC...................................................................................................................................................... 21 0 11 0.09 1 0 0 1 0 0 0 0 0 0
.................................................................ACAAATGACAAATGTAGGCAT.............................................................................................................. 21 0 11 0.09 1 0 1 0 0 0 0 0 0 0
........................AAAACGTGAGCCTACACCGA........................................................................................................................................................ 20 0 11 0.09 1 0 0 1 0 0 0 0 0 0
...................................CTACACCGAGCAGACCATAACCCATT....................................................................................................................................... 26 0 11 0.09 1 0 0 1 0 0 0 0 0 0
......................................CACCGAGCAGACCATAACCCATT....................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0 0
..........................................GAGCAGACCATAACCCATT....................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGCATT............................................................................................................. 23 0 11 0.09 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCGGCGAGTGTGTGACACGG.. 20 0 12 0.08 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................ATCGGCGAGTGTGTGACACG... 20 1 12 0.08 1 0 0 1 0 0 0 0 0 0
..........GTACCTTAGTTAACAAAACGT..................................................................................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0
.....CGTCTGTACCTTAGTTAACAA.......................................................................................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0
........CTGTACCTTAGTTAACAAAACGTCA................................................................................................................................................................... 25 1 12 0.08 1 0 0 1 0 0 0 0 0 0
..CGTCGTCTGTACCTTAGTTA.............................................................................................................................................................................. 20 0 12 0.08 1 0 0 0 1 0 0 0 0 0
.....CGTCTGTACCTTAGTTAACAAAACGT..................................................................................................................................................................... 26 0 12 0.08 1 1 0 0 0 0 0 0 0 0
......GTCTGTACCTTAGTTAACAAA......................................................................................................................................................................... 21 0 12 0.08 1 0 1 0 0 0 0 0 0 0
......GTCTGTACCTTAGTTAACAAAACGT..................................................................................................................................................................... 25 0 12 0.08 1 1 0 0 0 0 0 0 0 0
.................................GCCTACACCGAGCAGACCAT............................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0 0
..................................CCTACACCGAGCAGACCATA.............................................................................................................................................. 20 0 13 0.08 1 0 0 1 0 0 0 0 0 0
.................................GCCTACACCGAGCAGACCA................................................................................................................................................ 19 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTCGGCGACTGTGTGCGACGGC. 22 3 13 0.08 1 0 0 0 0 0 0 1 0 0
.....................................ACACCGAGCAGACCATAACCC.......................................................................................................................................... 21 0 13 0.08 1 0 0 1 0 0 0 0 0 0
..................................CCTACACCGAGCAGACCATAA............................................................................................................................................. 21 0 13 0.08 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................ACCACTTAGTCCTAGACTTTTTTC.................... 24 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................ACACTTAGTCCTAGACTTTTTTCG................... 24 1 13 0.08 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GCGAGTGTGTGACACGGC. 18 0 13 0.08 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TAGTCCTAGACTTTTTTCGGCGAGT............. 25 0 13 0.08 1 0 0 1 0 0 0 0 0 0
...................................CTACACCGAGCAGACCATAAC............................................................................................................................................ 21 0 13 0.08 1 0 0 1 0 0 0 0 0 0
................................AGCCTACACCGAGCAGACCATAAC............................................................................................................................................ 24 0 13 0.08 1 1 0 0 0 0 0 0 0 0
....................................TACACCGAGCAGACCATAA............................................................................................................................................. 19 0 13 0.08 1 1 0 0 0 0 0 0 0 0
................................AGCCTACACCGAGCAGACCATAA............................................................................................................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................CAATGGACCACTTAGTCCTAGACT.......................... 24 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AGACTTTTTTCGGCGAGTGTGTGA....... 24 0 14 0.07 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................CCAATGGACCACTTAGTCCTAGA............................ 23 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTTTTCGGCGAGTGTGTG........ 19 0 14 0.07 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................ACCACTTAGTCCTAGACTTTTT...................... 22 0 14 0.07 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TAGACTTTTTTCGGCGAGTGT........... 21 0 14 0.07 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................TTTTTCGGCGAGTGTGTGACA..... 21 0 14 0.07 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................GACTTTTTTCGGCGAGTGTGTGACA..... 25 0 14 0.07 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................AATGGACCACTTAGTCCTAGAC........................... 22 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.TCGTCGTCTGTACCTTAGTGA.............................................................................................................................................................................. 21 1 14 0.07 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................GACTTTTTTCGGCGAGTGTGT......... 21 0 14 0.07 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................CAATGGACCACTTAGTCCTAGA............................ 22 0 14 0.07 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGGCGAGAGTGTGACACTAC. 20 3 15 0.07 1 0 0 0 0 0 0 1 0 0
...................................AAACACCGAGCAGACCAT............................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.TCGTCGTCTGTAGCTCAG................................................................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_524:8776-8971 - dps_2060 GAGCAG------------------------------CAGACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------CGTAAACACTTGTAATT-CTGT----T-----GTGGC--ATTTTCTTTTGTGGCTTGGCTCCCCGCTC-C---CTTGTAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC----------
droPer2 scaffold_30:31635-31830 - GAGCAG------------------------------CAGACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------CGTAAACACTTGTAATT-CTGT----T-----GTGGC--ATTTTCTTTTGTGGCTTGGCTCCCCGCTC-C---CTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC----------
droWil2 scf2_1100000004909:7480159-7480366 + AG----------------------------------AAAACATGGAATCAATTGTTTTACATGCAGATGTAGCACGTCTGGTTCTTGGTAAGTAA-------TGCCCTTCCGTTCTTTAGGAA-----ATC--GACATGCT------------------------------------------------------------GCATATGGCGTCTCCTACACCAGAA------AATGA-----------------AAAT----T-----CTTTGGAAT-----------------T-------TTA----TTTGCAGGCTATTTGGTTAAACAAAACCTGCGACGAGCGGCTTACAGTTTATGCCGATCATCGCCAC
droVir3 scaffold_12970:7558539-7558707 - AATCAA------------------------------GAAAAATGGAATCAATTGTGCTGCATTCTGACATCGCGCGTCTAATTTTGGGTGAGTCT----------------------GGTAG-------T-----------C--CCA----------------------------------TGTCGTTCG---------------------------G-----TGC------CTTTA-----------------ATGC----C-----TTTCA--AT-GT----C---------T-------GCA----TTTGCAGGATATTTCATAAATAACAATCTAAAACGGGCGGCGTTAACACTGTGCCGC----------
droMoj3 scaffold_6482:2162390-2162550 + -----------------------------------------ATGGAATCAATTGTGTTGCATTCGGATATCGCGCGTCTCGTTTTGGGTGGGTTT-------T---------------CAAC-------T----------------------------CTT-GC--ATTGTAAA---------AT--------------------------------CATATGCCT------TATTA-----------------ACAGTTATT-----GCCGT--A---------------------------------TTTTCAGGCTACTTTGTAAATAACAATTTGAGACGTGCGGCACTTTCATTGTGTCGC----------
droGri2 scaffold_15203:7053996-7054214 + GAATAAACAA-CTAACCACAGTACGCAATAAGCGAGC-AGAATGAAATCCATTGTACTGCATTCGGACATAGCGCGTCTAATTTTAGGTAAGTAGTC--------------------TGGGT-------C-----------T--CTTGCA-------------G--ACGCTGGT---------CTGATCGATCGACATTTCAT--------------AAAT---------------T-----------------GCGC----T-----TGACA--AT-TT----C---------------GGCA-T---CTATTAGGCTATTTATTAAATAATGATCTGAGGCATGCGGCGCTAACGTTTTGTCGC----------
droAna3 scaffold_13047:999468-999642 - GTCCAG------------------------------CAGTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCGCGTCTGGTTTTGGGTGAGTCC----------------------TGTAC-------C-----------T--CCAGTTATT-----CCT-GA--ATTTCTTA---------CT--------------------------------G-----AGC------TACTT-----------------ACGT----T---------------------TGGGA-------------CT-C---ATTCCAGGGTACTTGGTGAATCAGAACCTGACGCGAGCCGCTAACACACTGTGCCGC----------
droBip1 scf7180000396431:773915-774087 - GTCCGG------------------------------CAGTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCACGTCTAGTTTTGGGTGAGTCC----------------------TGTAC-------C-----------T--CTAGTTGGT-----CTT-GA--A-----------------------------------------------------GCTGTT------TACTT-----------------A-GC----T-----C---C--TT-GT----TGG---------------CA-TTC-ATTTCAGGCTACTTGGTGAATCAGAATCTGACGCGAGCCGCTAACACACTGTGCCGC----------
droKik1 scf7180000302704:121664-121827 + -----------------------------------------ATGGACTCGATCGTTCTGCACTCGGATGTGGCCCGGCTTGTTCTGGGTGAGTCT-------A------------------------------------------------------CTCC-G----------------------------------------------------------------------------------------------C----G-----GCGAC--GTTCTTTCTTCTTGCTAATGCCTTTGCCC-G---CTCGCAGGCTACTTGGTTAACCAGAATCTGCGGCGAGCGGCCCATACCCTGTGTCGCACATCGCCGC
droFic1 scf7180000454073:2050028-2050205 - ----------------------------------------CATGGAGTCAATTGTCCTTCATTCCGATGTAGCTCGTTTGGTTCTAGGTAAGTTGTTGGTTTT------------------------------------------------------CCCT-GC---------CC------TGCC-------------------------------------GCTA------TATTC-----------------ATGATTATTTTTCTCGCCA--AT-----------------T-------ATATTG--GTATAGGCTACTTGGTTAACCAGAATCTGGAAAAGGCCGCACACACTTTGTGTCGCACATCGCCGC
droEle1 scf7180000491018:135620-135803 + GAGCCGGAAAATTC----------------------CAGCCATGGAATCGATTGTGCTGCATTCGGATGTGGCGCGCTTGGTCCTAGGTGAGTTT----------------------CGTTT---GCTGC-----------T--CCTGCT-------------G--TT---------------------------------G----------------GATC--------------CGTGAATCATC------CATGA----T-----CC-----AT-----------------C-------ATATGCATATGTAGGCTATCTGGTCAACCAGAATCTGAAGCGGGCGGCCCACACGCTGTGCCGC----------
droRho1 scf7180000779966:30899-31069 - ------------------------------------CAGCCATGGAGTCAATTGTGCTGCATTCGGATGTAGCGCGCTTGGTCCTGGGTAAGTTT--------------------------------------------------------------CCCT-AG--A-GATTCCC------TACCGGCTGATTTACGAG---------------------------------------CAAAG-------------GC-----------TTGC--AC--------------------------------TTTATAGGCTACCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGCACATCGCCGC
droBia1 scf7180000301760:5106666-5106873 - GAGCCGAGAA-GTC----------------------CAGTCATGGAGTCGATTGTCCTGCACTCGGATGTGGCGCGCCTGGTTCTGGGTGAGTTC----------------------CATTTCGTTTTGTTTC--------GCT--TGG----GATT-CC-AATGGA---CTCCC------TGGCTGC-------CGAG-------------------CAGCATGAAATTCTTGTTT-----------------GTGC----T-----GG--------------------------------CT-C---TTTCCAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACCCTGTGTCGC----------
droTak1 scf7180000415696:92186-92379 - GAGCCGGGAGTGTC----------------------CAGCCATGGAGTCGATAGTCCTGCACTCGGATGTGGCGCGCCTGGTCCTGGGTGAGTTG-------C---------------CC---------------------CCT--TGGAG--GTTC-CC-ATTGGA---ATTCCATATTCCCCC--------------------------------A-----GCA------TATTC-----------------ATGA----T-----TTTTG--GT-------T---------T-------ATA----TTTTCAGGCTACCTGGTCAACCAGAATCTCAAGAGGGCCGCCCACACCCTGTGCCGC----------
droEug1 scf7180000409032:824482-824682 + AAGCCGAGAA-ATC----------------------CAGCCATGGAGTCGATTGTCTTACACTCGGATGTGGCACGCTTGGTCCTGGGTGAGTTT----------------------TATTGT-----GTT--TAAAATTT----------------TCGC-AA--AGGATTCT---------CT--------------------------------GCAGCACGA------TATTC-----------------ATGT----T-----GCCTG--GT-------------------------TG-C---AATTTAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGGACATCACCGC
dm3 chrX:9137084-9137242 - ------------------------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTTT-------T------------------------------------------------------CCCT-GG--ACGCTTTT---------CT--------------------------------AGCTCGCAA------TATTT-----------------ATGC----T-----CTTCC--AT--------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------
droSim2 x:8683207-8683365 - ------------------------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTTT-------T------------------------------------------------------CCCT-GG--ACGCTTTC---------CT--------------------------------AGCTCGCGA------TATTT-----------------ATGC----T-----GTTCC--AT--------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------
droSec2 scaffold_68:24792-24950 - ------------------------------------CAGCTATGGAGTCGATTGTCCTGCATTCGGACTTGGCTCGCTTGGTCCTGGGTAGGTTT-------T------------------------------------------------------CCCT-GG--ACGTTTTC---------CT--------------------------------AACTTGCGA------TATTT-----------------ATGC----T-----GTTCC--AT--------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------
droYak3 X:17733177-17733347 - GAGCCGCAAA-GTC----------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTCAGTTT-------T------------------------------------------------------CCCT-GC--ATGATTTC---------CT--------------------------------GACGCTCTA------TACTC-----------------ATGC----T-----GTTTC--A---------------------------------TTTGTAGGATACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------
droEre2 scaffold_4690:5978217-5978374 + ------------------------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTAAGTTT-------T------------------------------------------------------CCCT-GG--ATGCTTTC---------CT--------------------------------GACGAGCGA------TATTT-----------------ATGC----T-----GTTTC--A---------------------------------TTTTTAGGCTATCTAGTCAACCAGAATCTAATACGGGCCGCACACACTCTGTGTCGC----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAGCAG------------------------------CAGACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------CGTAAACACTTGTAATT-CTGT----T-----GTGGC--ATTTTCTTTTGTGGCTTGGCTCCCCGCTC-C---CTTGTAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................TGGAATCAATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................251034.203420227900019870
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACA.....................261426.21367035751002200
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGC.............261222.002640180611007420
.........................................................TGCACTCGGATGTGGCTCGTCTGG.......................................................................................................................................................................................................................................................................................................241016.90169016410103000
..........................................TGGAATCAATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................27915.441390125100011110
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTG................251411.00154014530101400
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAC......................251410.141420125170000000
.........................................................TGCACTCGGATGTGGCTCGTCTG........................................................................................................................................................................................................................................................................................................23109.909909810000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACA...................28148.71122011820000200
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACAC..................29146.799508950001000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAC....................27146.509108360002000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCA.......................24146.439008620101000
..........................................TGGAATCAATTGTTTTGCACTCGG......................................................................................................................................................................................................................................................................................................................24105.105103700000950
.........................................................TGCACTCGGATGTGGCTCGTCT.........................................................................................................................................................................................................................................................................................................22105.005005000000000
...................................................TTGTTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................22114.915403910407300
...................................................TTGTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................24114.735214620001200
.........................................................TGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................21104.104104100000000
...................................................TTGTTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................21114.094504100003010
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTGC.............28124.004804150000200
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTC........................23143.645104630010010
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTG..............25123.253903110000520
.........................................................TGCACTCGGATGTGGCTCGTCTGGT......................................................................................................................................................................................................................................................................................................25102.902902900000000
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACA.....................25142.503503400000100
...............................................TCAATTGTTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................25102.202201900000102
..................................................................................................................................................................................................................................................................................................................................................GAAAAAAGCCGCTCACACACTGTGC.............25122.002402310000000
...........................................GGAATCAATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................24102.002002000000000
....................................................TGTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................23111.912102000000100
....................................................TGTTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................21111.822001200212300
....................................................TGTTTTGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................26101.801801800000000
..........................................TGGAATCAATTGTTTTGCACTCGGAT....................................................................................................................................................................................................................................................................................................................26101.701701310000300
...................................................TTGTTTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................23111.551701610000000
...................................................TTGTTTTGCACTCGGATGTGGCTCG............................................................................................................................................................................................................................................................................................................25111.551701600100000
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACAC..................23141.502101600000500
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTG................23141.502102000100000
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGT...............26141.432001610000300
...............................................TCAATTGTTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................26101.40140820102100
.........................................ATGGAATCAATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................26101.401401100000210
..........................................TGGAATCAATTGTTTTGCACTCG.......................................................................................................................................................................................................................................................................................................................23101.301301210000000
...................................................TTGTTTTGCACTCGGATGTGGCTCGT...........................................................................................................................................................................................................................................................................................................26101.301301300000000
..........................................................GCACTCGGATGTGGCTCGTCTGG.......................................................................................................................................................................................................................................................................................................23101.301301300000000
................................................................................................................................................................................................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTG................24141.291801700000100
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTG..............27121.171401110000200
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACAC....................26141.141601600000000
..........................................................GCACTCGGATGTGGCTCGTCTG........................................................................................................................................................................................................................................................................................................22101.101101100000000
....................................................TGTTTTGCACTCGGATGTGGCTCG............................................................................................................................................................................................................................................................................................................24111.091201200000000
...................................................TTGTTTTGCACTCGGATGTG.................................................................................................................................................................................................................................................................................................................20111.091201000001100
.....................................................................................................................................................................................................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGC..........................25131.00130810000400
........................................................................................TAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------CG..........................................................................................................................................2691.0090300000510
....................................................TGTTTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................22110.91100900100000
.........................................................TGCACTCGGATGTGGCTCG............................................................................................................................................................................................................................................................................................................19110.911001000000000
........................................................TTGCACTCGGATGTGGCTCGTCTGG.......................................................................................................................................................................................................................................................................................................25100.9090800001000
...................................................TTGTTTTGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................27100.9090900000000
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACT.................24140.86120810000300
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACA...................27140.861201200000000
....................................................TGTTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................20110.8290610001010
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCAC......................24140.71100900001000
....................................CAGACATGGAATCAATTGTTTTGCAC..........................................................................................................................................................................................................................................................................................................................26100.7070700000000
.........................................................TGCACTCGGATGTGGCTCGT...........................................................................................................................................................................................................................................................................................................20100.7070700000000
...............................................TCAATTGTTTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................27100.7070600000100
.........................................................TGCACTCGGATGTGGCTCGTCTGGG......................................................................................................................................................................................................................................................................................................25100.7070700000000
...........................................GGAATCAATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................2690.6760600000000
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGT...............24140.6490700000200
..........................................................GCACTCGGATGTGGCTCGTCT.........................................................................................................................................................................................................................................................................................................21100.6060600000000
...........................................GGAATCAATTGTTTTGCACTCGG......................................................................................................................................................................................................................................................................................................................23100.6060600000000
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCC............27120.5870520000000
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACAC..................28140.5780710000000
.......................................................................................................................................................................................................................................................................................................................TGTAGGTTACCTGGTGAATCAGGAT........................................2520.5010100000000
..........................................TGGAATCAATTGTTTTG.............................................................................................................................................................................................................................................................................................................................17120.5060000000510
.......................................................TTTGCACTCGGATGTGGCTCGTCTGG.......................................................................................................................................................................................................................................................................................................26100.5050500000000
........................................................TTGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................22100.5050500000000
........................................................TTGCACTCGGATGTGGCTCGTCT.........................................................................................................................................................................................................................................................................................................23100.5050500000000
..................................................................................................................................................................................................................................................................................................................................TGGTGAATCAGGATCTGAAAAAAGC.............................25130.4660200100210
.........................................ATGGAATCAATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................2890.4440300001000
....................................................................................TGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CA............................................................................................................................................................2690.4440100000300
GAGCAG------------------------------CAGACATGGAATCAATTGTTT...............................................................................................................................................................................................................................................................................................................................27120.4250500000000
..GCAG------------------------------CAGACATGGAATCAATTGTTT...............................................................................................................................................................................................................................................................................................................................25120.4250500000000
......................................................TTTTGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................24100.4040400000000
...............................................TCAATTGTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................28100.4040400000000
...................................................................................TTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------.................................................................................................................................................................................................................23100.4040000000400
................................................CAATTGTTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................24100.4040400000000
..........................................TGGAATCAATTGTTTTGCACTC........................................................................................................................................................................................................................................................................................................................22100.4040220000000
........................................................TTGCACTCGGATGTGGCTCGTCTG........................................................................................................................................................................................................................................................................................................24100.4040300001000
..........................................TGGAATCAATTGTTTTGCACTCGGAA....................................................................................................................................................................................................................................................................................................................26100.4040220000000
.....................................................................................................................................................................................................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGCTC........................27130.3850400000100
.....................................................GTTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................20110.3640200002000
.......................................................TTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................20110.3641300000000
......................................................TTTTGCACTCGGATGTGGCTCG............................................................................................................................................................................................................................................................................................................22110.3640200002000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCT.........................22140.3650410000000
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTC........................22140.3650500000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAA....................27140.3650500000000
................................................................................................................................................................................................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTGTGC.............27120.3340400000000
...................................................................TGTGGCTCGTCTGGTATTGG.................................................................................................................................................................................................................................................................................................20130.3140300001000
........................................................................................................................................................................................................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTC........................24130.3140220000000
.........................................................TGCACTCGGATGTGGCTCGTCAAA.......................................................................................................................................................................................................................................................................................................24100.3030300000000
.......................................ACATGGAATCAATTGTTTTGCACTCGG......................................................................................................................................................................................................................................................................................................................27100.3030100000020
............................................GAATCAATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................23100.3030300000000
....................................................TGTTTTGCACTCGGATGTGGCTCGT...........................................................................................................................................................................................................................................................................................................25100.3030200001000
...............................................TCAATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................22100.3030300000000
..............................................................................TGGTATTGGGTAATTAC----------------------TGTTT---A..........................................................................................................................................................................................................................................................23100.3030100000020
.........................................................TGCACTCGGATGTGGCTCGTCTA........................................................................................................................................................................................................................................................................................................23100.3030300000000
.......................................................TTTGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................23100.3030300000000
.........................................................................................AATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------C.............................................................................................................................................................20110.2730000000030
.......................................................TTTGCACTCGGATGTGGCTCG............................................................................................................................................................................................................................................................................................................21110.2730120000000
...................................................TTGTTTTGCACTCGGATGTGGT...............................................................................................................................................................................................................................................................................................................22110.2730300000000
........................................................TTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................19110.2731200000000
...................................................TTGTTTTGCACTCGGATGTGGCTCA............................................................................................................................................................................................................................................................................................................25110.2730000000300
...CAG------------------------------CAGACATGGAATCAATTGTTT...............................................................................................................................................................................................................................................................................................................................24120.2530300000000
........................................................................................................................................................................................................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCAC......................26130.2330300000000
........................................................................................................................................................................................................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCA.......................25130.2330300000000
...........................................................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACAC..................27140.2130300000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCG...........................20140.2130300000000
...........................................................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACA...................26140.2130100000200
..........................................................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCA.......................23140.2130300000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGC..........................21140.2130200000010
..............................................ATCAATTGTTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................27100.2020200000000
....................................CAGACATGGAATCAATTGTTTTGCACTC........................................................................................................................................................................................................................................................................................................................28100.2020200000000
.........................................................TGCACTCGGATGTGGCTCGTCAA........................................................................................................................................................................................................................................................................................................23100.2020200000000
.........................................................TGCACTCGGATGTGGCTCGTT..........................................................................................................................................................................................................................................................................................................21100.2020200000000
.................................................................................TATTGGGTAATTAC----------------------TGTTT---ACTG.......................................................................................................................................................................................................................................................23100.2020000000020
..........................................................GCACTCGGATGTGGCTCGTCTGGT......................................................................................................................................................................................................................................................................................................24100.2020200000000
......................................................TTTTGCACTCGGATGTGGCTCGT...........................................................................................................................................................................................................................................................................................................23100.2020200000000
.........................................................TGCACTCGGATGTGGCTCGTCA.........................................................................................................................................................................................................................................................................................................22100.2020200000000
.........................................................TGCACTCGGATGTGGCTCGTCTGT.......................................................................................................................................................................................................................................................................................................24100.2020200000000
.........................................................TGCACTCGGATGTGGCTCGTCTGGA......................................................................................................................................................................................................................................................................................................25100.2020200000000
..........................................................GCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................20100.2020200000000
..............................................................................TGGTATTGGGTAATTAC----------------------TGTTT---ACTG.......................................................................................................................................................................................................................................................26100.2020200000000
........................................CATGGAATCAATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................27100.2020200000000
.....................................................GTTTTGCACTCGGATGTGGCTCGTC..........................................................................................................................................................................................................................................................................................................25100.2020200000000
.........................................................TGCACTCGGATGTGGCTCGTCTGGTA.....................................................................................................................................................................................................................................................................................................26100.2020200000000
.....................................................GTTTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................21110.1820200000000
.............................................AATCAATTGTTTTGCACTCGG......................................................................................................................................................................................................................................................................................................................21110.1820000000020
....................................................TGTTTTGCACTCGGATGTGAA...............................................................................................................................................................................................................................................................................................................21110.1820200000000
....................................................TGTTTTGCACTCGGATGTGA................................................................................................................................................................................................................................................................................................................20110.1820200000000
..........................................................GCACTCGGATGTGGCTCG............................................................................................................................................................................................................................................................................................................18110.1820200000000
...................................................TTGTTTTGCACTCGGATGTGGCTCC............................................................................................................................................................................................................................................................................................................25110.1820200000000
.................................................AATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................18110.1820200000000
......................................................TTTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................21110.1821010000000
.........................................................TGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................18110.1820200000000
GAGCAG------------------------------CAGACATGGAATCAATTGTT................................................................................................................................................................................................................................................................................................................................26120.1720200000000
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCCG...........28120.1720200000000
GAGCAG------------------------------CAGACATGGAATCAATTG..................................................................................................................................................................................................................................................................................................................................24120.1720200000000
.....................................................................................................................................................................................................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCG...........................24130.1520200000000
................................................................................................................................................................................................................................................................................................................................CCTGGTGAATCAGGATCTGAAAAAAG..............................26130.1520200000000
...................................................................TGTGGCTCGTCTGGTATTGGG................................................................................................................................................................................................................................................................................................21130.1520100001000
.....................................................................TGGCTCGTCTGGTATTGGGT...............................................................................................................................................................................................................................................................................................20130.1520000110000
..............................................................TCGGATGTGGCTCGTCTGGTATTGG.................................................................................................................................................................................................................................................................................................25130.1520200000000
..............................................................................................................................................................................................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACAC..................24140.1420200000000
..................................................................................................................................................................................................................................................................................................................................................GAAAAAAGCCGCTCACACACTG................22140.1420200000000
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGA...............26140.1420000000200
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACT...................28140.1420110000000
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACAC..................21140.1420010001000
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACA...................22140.1420200000000
..............................................................................................................................................................................................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACACTG................26140.1420200000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTT........................23140.1420200000000
...........................................................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACA.....................24140.1420200000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACT.....................26140.1420110000000
..............................................................................................................................................................................................................................................................................................................................TACCTGGTGAATCAGGATCTG.....................................21140.1420200000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAA......................25140.1420200000000
.........................................................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCC.......................24140.1420200000000
.................................................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACA.....................18140.1420200000000
...........................................................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTC........................21140.1420200000000
..............................................................................................................................................................................................................................................................................................................................TACCTGGTGAATCAGGATCTGAAAAA................................26140.1420100000100
.....................................................................................................................................................................................................................................................TTGTAATT-CTGT----T-----GTGGC--ATTTTC...............................................................................................2480.1310100000000
..........................................TGGAATCAATTGTTTTGCACTCGGATA...................................................................................................................................................................................................................................................................................................................2790.1110100000000
........................................................................................TAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------C...........................................................................................................................................2590.1110000000100
............................................GAATCAATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................2590.1110100000000
...................................................................................TTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CA............................................................................................................................................................2790.1110000000010
..............................................ATCAATTGTTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................26100.1010100000000
........................................................TTGCACTCGGATGTGGCTCGTTA.........................................................................................................................................................................................................................................................................................................23100.1010100000000
............................................................ACTCGGATGTGGCTCGTCTGGT......................................................................................................................................................................................................................................................................................................22100.1010100000000
........................................CATGGAATCAATTGTTTTGCACTC........................................................................................................................................................................................................................................................................................................................24100.1010100000000
...............................................TCAATTGTTTTGCACTCGGATGTGGCTT.............................................................................................................................................................................................................................................................................................................28100.1010100000000
..........................................TGGAATCAATTGTTTTGCACTCGGAC....................................................................................................................................................................................................................................................................................................................26100.1010010000000
...........................................................CACTCGGATGTGGCTCGTCTG........................................................................................................................................................................................................................................................................................................21100.1010100000000
.......................................................TTTGCACTCGGATGTGGCTCGTCTGGT......................................................................................................................................................................................................................................................................................................27100.1010100000000
.................................................AATTGTTTTGCACTCGGATGT..................................................................................................................................................................................................................................................................................................................21100.1010000001000
....................................CAGACATGGAATCAATTGTTTTGCACT.........................................................................................................................................................................................................................................................................................................................27100.1010100000000
.............................................AATCAATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................24100.1010100000000
................................................CAATTGTTTTGCACTCGGATGT..................................................................................................................................................................................................................................................................................................................22100.1010100000000
..............................................................................TGGTATTGGGTAATTAC----------------------TGTTT---ACT........................................................................................................................................................................................................................................................25100.1010100000000
..................................................ATTGTTTTGCACTCGGATGTG.................................................................................................................................................................................................................................................................................................................21100.1010100000000
........................................CATGGAATCAATTGTTTTGCACC.........................................................................................................................................................................................................................................................................................................................23100.1010010000000
.......................................ACATGGAATCAATTGTTTTGCACTCGGA.....................................................................................................................................................................................................................................................................................................................28100.1010100000000
.........................................................TGCACTCGGATGTGGCTCGTCTT........................................................................................................................................................................................................................................................................................................23100.1010100000000
...........................................................CACTCGGATGTGGCTCGTCTGG.......................................................................................................................................................................................................................................................................................................22100.1010100000000
............................................................................TCTGGTATTGGGTAATTAC----------------------TGTTT---...........................................................................................................................................................................................................................................................24100.1010100000000
.................................................................................TATTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------.................................................................................................................................................................................................................25100.1010100000000
...................................................................................TTGGGTAATTAC----------------------TGTTT---ACTG.......................................................................................................................................................................................................................................................21100.1010000000010
......................................................................................................................................................................................................................................................................T-----GTGGC--ATTTTCTTTTGTGGCTTTTG.................................................................................26100.1010000000010
........................................................................................TAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------C.............................................................................................................................................................21100.1010000000010
.....................................................................TGGCTCGTCTGGTATTGGGTAATTAC----------------------...................................................................................................................................................................................................................................................................26100.1010100000000
...............................................TCAATTGTTTTGCACTCGGATGT..................................................................................................................................................................................................................................................................................................................23100.1010100000000
....................................................................................TGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------.................................................................................................................................................................................................................22100.1010100000000
.................................................AATTGTTTTGCACTCGGATG...................................................................................................................................................................................................................................................................................................................20100.1010000001000
...................................................TTGTTTTGCACTCGGATGTGGCTCGTCT.........................................................................................................................................................................................................................................................................................................28100.1010100000000
..........................................TGGAATCAATTGTTTTGCAC..........................................................................................................................................................................................................................................................................................................................20100.1010001000000
...............................................TCAATTGTTTTGCACTCGGATGTGAAA..............................................................................................................................................................................................................................................................................................................27100.1010100000000
.....................................AGACATGGAATCAATTGTTTTGCACT.........................................................................................................................................................................................................................................................................................................................26100.1010100000000
.......................................................TTTGCACTCGGATGTGGCTCGTCTT........................................................................................................................................................................................................................................................................................................25100.1010100000000
.......................................................TTTGCACTCGGATGTGGCTCGTCT.........................................................................................................................................................................................................................................................................................................24100.1010100000000
.................................................AATTGTTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................24100.1010000000100
.........................................................TGCACTCGGATGTGGCTCGTCTGA.......................................................................................................................................................................................................................................................................................................24100.1010100000000
.......................................................TTTGCACTCGGATGTGGCTCGTCTAAA......................................................................................................................................................................................................................................................................................................27100.1010100000000
.........................................ATGGAATCAATTGTTTTGCACTCGGAT....................................................................................................................................................................................................................................................................................................................27100.1010100000000
...................................................................................TTGGGTAATTAC----------------------TGTTT---ACTGT......................................................................................................................................................................................................................................................22100.1010100000000
...............................................TCAATTGTTTTGCACTCGGATGTG.................................................................................................................................................................................................................................................................................................................24100.1010100000000
................................................................................GTATTGGGTAATTAC----------------------TGTTT---A..........................................................................................................................................................................................................................................................21100.1010000000100
..............................................................................TGGTATTGGGTAATTAC----------------------TGTTT---ACTA.......................................................................................................................................................................................................................................................26100.1010100000000
................................................CAATTGTTTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................26100.1010100000000
........................................................TTGCACTCGGATGTGGCTCGTCTGT.......................................................................................................................................................................................................................................................................................................25100.1010100000000
..........................................................GCACTCGGATGTGGCTCGTCTGGTA.....................................................................................................................................................................................................................................................................................................25100.1010100000000
.......................................................TTTGCACTCGGATGTGGCTCGTCTGT.......................................................................................................................................................................................................................................................................................................26100.1010100000000
............................................................................TCTGGTATTGGGTAATTAC----------------------AAA................................................................................................................................................................................................................................................................22110.0910100000000
...................................................TTGTTTTGCACTCGGATGTGGCTCGC...........................................................................................................................................................................................................................................................................................................26110.0910100000000
...............................................TCAATTGTTTTGCACTCGG......................................................................................................................................................................................................................................................................................................................19110.0910000000010
........................................................TTGCACTCGGATGTGGCTCGG...........................................................................................................................................................................................................................................................................................................21110.0910100000000
................................................CAATTGTTTTGCACTCGGAT....................................................................................................................................................................................................................................................................................................................20110.0910001000000
...................................................TTGTTTTGCACTCGGATGTGA................................................................................................................................................................................................................................................................................................................21110.0910100000000
......................................................TTTTGCACTCGGATGTGGCTCCC...........................................................................................................................................................................................................................................................................................................23110.0911000000000
...................................................TTGTTTTGCACTCGGATGTGGAA..............................................................................................................................................................................................................................................................................................................23110.0910100000000
.............................................................................................AC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------CG..........................................................................................................................................21110.0910000000010
.....................................................GTTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................19110.0910100000000
.......................................................TTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................19110.0910100000000
......................................................TTTTGCACTCGGATGTGG................................................................................................................................................................................................................................................................................................................18110.0910100000000
.....................................................GTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................22110.0910100000000
......................................................TTTTGCACTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................20110.0910100000000
......................................................TTTTGCACTCGGATGTGGC...............................................................................................................................................................................................................................................................................................................19110.0910000100000
droPer2
GAGCAG------------------------------CAGACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTAC----------------------TGTTT---ACTGTT------------------------------------T---------------------------------A----------------CATC--------------CGTAAACACTTGTAATT-CTGT----T-----GTGGC--ATTTTCTTTTGTGGCTTGGCTCCCCGCTC-C---CTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTG..............2711.001100000
.....................................................GTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................................................................................................................................................................2211.001100000
droWil2
AG----------------------------------AAAACATGGAATCAATTGTTTTACATGCAGATGTAGCACGTCTGGTTCTTGGTAAGTAA-------TGCCCTTCCGTTCTTTAGGAA-----ATC--GACATGCT------------------------------------------------------------GCATATGGCGTCTCCTACACCAGAA------AATGA-----------------AAAT----T-----CTTTGGAAT-----------------T-------TTA----TTTGCAGGCTATTTGGTTAAACAAAACCTGCGACGAGCGGCTTACAGTTTATGCCGATCATCGCCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................AAACAAAACCTGCGACGAGCGGCT.........................2411.00101000
droVir3
AATCAA------------------------------GAAAAATGGAATCAATTGTGCTGCATTCTGACATCGCGCGTCTAATTTTGGGTGAGTCT----------------------GGTAG-------T-----------C--CCA----------------------------------TGTCGTTCG---------------------------G-----TGC------CTTTA-----------------ATGC----C-----TTTCA--AT-GT----C---------T-------GCA----TTTGCAGGATATTTCATAAATAACAATCTAAAACGGGCGGCGTTAACACTGTGCCGC----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................AACAATCTAAAACGGGCGGC..........................2011.001000000000000000000100000000000000000000000000000000000000000000
...CAA------------------------------GAAAAATGGAATCGT.....................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000001000000000000000000000000000000
droMoj3
-----------------------------------------ATGGAATCAATTGTGTTGCATTCGGATATCGCGCGTCTCGTTTTGGGTGGGTTT-------T---------------CAAC-------T----------------------------CTT-GC--ATTGTAAA---------AT--------------------------------CATATGCCT------TATTA-----------------ACAGTTATT-----GCCGT--A---------------------------------TTTTCAGGCTACTTTGTAAATAACAATTTGAGACGTGCGGCACTTTCATTGTGTCGC----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GAATAAACAA-CTAACCACAGTACGCAATAAGCGAGC-AGAATGAAATCCATTGTACTGCATTCGGACATAGCGCGTCTAATTTTAGGTAAGTAGTC--------------------TGGGT-------C-----------T--CTTGCA-------------G--ACGCTGGT---------CTGATCGATCGACATTTCAT--------------AAAT---------------T-----------------GCGC----T-----TGACA--AT-TT----C---------------GGCA-T---CTATTAGGCTATTTATTAAATAATGATCTGAGGCATGCGGCGCTAACGTTTTGTCGC----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GTCCAG------------------------------CAGTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCGCGTCTGGTTTTGGGTGAGTCC----------------------TGTAC-------C-----------T--CCAGTTATT-----CCT-GA--ATTTCTTA---------CT--------------------------------G-----AGC------TACTT-----------------ACGT----T---------------------TGGGA-------------CT-C---ATTCCAGGGTACTTGGTGAATCAGAACCTGACGCGAGCCGCTAACACACTGTGCCGC----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................GTTGCGCGTCTGGTTTTGG.................................................................................................................................................................................................................................................................................................1911.001000001
droBip1
GTCCGG------------------------------CAGTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCACGTCTAGTTTTGGGTGAGTCC----------------------TGTAC-------C-----------T--CTAGTTGGT-----CTT-GA--A-----------------------------------------------------GCTGTT------TACTT-----------------A-GC----T-----C---C--TT-GT----TGG---------------CA-TTC-ATTTCAGGCTACTTGGTGAATCAGAATCTGACGCGAGCCGCTAACACACTGTGCCGC----------SizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------------------ATGGACTCGATCGTTCTGCACTCGGATGTGGCCCGGCTTGTTCTGGGTGAGTCT-------A------------------------------------------------------CTCC-G----------------------------------------------------------------------------------------------C----G-----GCGAC--GTTCTTTCTTCTTGCTAATGCCTTTGCCC-G---CTCGCAGGCTACTTGGTTAACCAGAATCTGCGGCGAGCGGCCCATACCCTGTGTCGCACATCGCCGCSizeHit CountTotal NormTotal
No Reads
droFic1
----------------------------------------CATGGAGTCAATTGTCCTTCATTCCGATGTAGCTCGTTTGGTTCTAGGTAAGTTGTTGGTTTT------------------------------------------------------CCCT-GC---------CC------TGCC-------------------------------------GCTA------TATTC-----------------ATGATTATTTTTCTCGCCA--AT-----------------T-------ATATTG--GTATAGGCTACTTGGTTAACCAGAATCTGGAAAAGGCCGCACACACTTTGTGTCGCACATCGCCGCSizeHit CountTotal NormTotal
No Reads
droEle1
GAGCCGGAAAATTC----------------------CAGCCATGGAATCGATTGTGCTGCATTCGGATGTGGCGCGCTTGGTCCTAGGTGAGTTT----------------------CGTTT---GCTGC-----------T--CCTGCT-------------G--TT---------------------------------G----------------GATC--------------CGTGAATCATC------CATGA----T-----CC-----AT-----------------C-------ATATGCATATGTAGGCTATCTGGTCAACCAGAATCTGAAGCGGGCGGCCCACACGCTGTGCCGC----------SizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------CAGCCATGGAGTCAATTGTGCTGCATTCGGATGTAGCGCGCTTGGTCCTGGGTAAGTTT--------------------------------------------------------------CCCT-AG--A-GATTCCC------TACCGGCTGATTTACGAG---------------------------------------CAAAG-------------GC-----------TTGC--AC--------------------------------TTTATAGGCTACCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGCACATCGCCGCSizeHit CountTotal NormTotal
No Reads
droBia1
GAGCCGAGAA-GTC----------------------CAGTCATGGAGTCGATTGTCCTGCACTCGGATGTGGCGCGCCTGGTTCTGGGTGAGTTC----------------------CATTTCGTTTTGTTTC--------GCT--TGG----GATT-CC-AATGGA---CTCCC------TGGCTGC-------CGAG-------------------CAGCATGAAATTCTTGTTT-----------------GTGC----T-----GG--------------------------------CT-C---TTTCCAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACCCTGTGTCGC----------SizeHit CountTotal NormTotal
No Reads
droTak1
GAGCCGGGAGTGTC----------------------CAGCCATGGAGTCGATAGTCCTGCACTCGGATGTGGCGCGCCTGGTCCTGGGTGAGTTG-------C---------------CC---------------------CCT--TGGAG--GTTC-CC-ATTGGA---ATTCCATATTCCCCC--------------------------------A-----GCA------TATTC-----------------ATGA----T-----TTTTG--GT-------T---------T-------ATA----TTTTCAGGCTACCTGGTCAACCAGAATCTCAAGAGGGCCGCCCACACCCTGTGCCGC----------SizeHit CountTotal NormTotal
No Reads
droEug1
AAGCCGAGAA-ATC----------------------CAGCCATGGAGTCGATTGTCTTACACTCGGATGTGGCACGCTTGGTCCTGGGTGAGTTT----------------------TATTGT-----GTT--TAAAATTT----------------TCGC-AA--AGGATTCT---------CT--------------------------------GCAGCACGA------TATTC-----------------ATGT----T-----GCCTG--GT-------------------------TG-C---AATTTAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGGACATCACCGCSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTTT-------T------------------------------------------------------CCCT-GG--ACGCTTTT---------CT--------------------------------AGCTCGCAA------TATTT-----------------ATGC----T-----CTTCC--AT--------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................CCATGGAGTCGATTGTCCTG.............................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACCTAGTCAACCAGAATCTAAAAAGGGC.............................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTGTCCTGCATTCGGACGTGGCTC.............................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGCCATGGAGTCGATTGTC................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCGGACGTGGCTCGCTTGGTCCTGG.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GATTGTCCTGCATTCGGA.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGTGGCTCGCTTGGTCCTGGGCT..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TCGATTGTCCTGCATTCGGACGTGGC...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ACCAGAATCTAAAAAGGG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ACGTGGCTCGCTTGGTCCTG..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CCAGAATCTAAAAAGGGCCGC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................AGCCATGGAGTCGATTGT.................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTGTCCTGCATTCGGACGTGG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCATTCGGACGTGGCTCG............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................AGCCATGGAGTCGATTGTCCTGC............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AGGGCCGCACACACTCTG................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TT-----------------ATGC----T-----CTTCC--AT--------------------------------TTTGTAG............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CCAGAATCTAAAAAGGGCC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GATTGTCCTGCATTCGGACGTGGCT..............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCCATGGAGTCGATTGTCCTG.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CTGCATTCGGACGTGGCTCGCT..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................TTGTCCTGCATTCGGACGTGGCTCGCT..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................ATTCGGACGTGGCTCGCTTGGTCCTG..................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GATTGTCCTGCATTCGGACGT..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCCATGGAGTCGATTGTCCT..............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCATTCGGACGTGGCTCGC...........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................GTCCTGCATTCGGACGTGGCTC.............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................TGGAGTCGATTGTCCTGCATTCGGA.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ACCAGAATCTAAAAAGGGC.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droSim2
------------------------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTTT-------T------------------------------------------------------CCCT-GG--ACGCTTTC---------CT--------------------------------AGCTCGCGA------TATTT-----------------ATGC----T-----GTTCC--AT--------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................ACCAGAATCTAAAAAGGGCCG...........................2111.00110000000000000000
droSec2
------------------------------------CAGCTATGGAGTCGATTGTCCTGCATTCGGACTTGGCTCGCTTGGTCCTGGGTAGGTTT-------T------------------------------------------------------CCCT-GG--ACGTTTTC---------CT--------------------------------AACTTGCGA------TATTT-----------------ATGC----T-----GTTCC--AT--------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GAGCCGCAAA-GTC----------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTCAGTTT-------T------------------------------------------------------CCCT-GC--ATGATTTC---------CT--------------------------------GACGCTCTA------TACTC-----------------ATGC----T-----GTTTC--A---------------------------------TTTGTAGGATACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
------------------------------------CAGCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTAAGTTT-------T------------------------------------------------------CCCT-GG--ATGCTTTC---------CT--------------------------------GACGAGCGA------TATTT-----------------ATGC----T-----GTTTC--A---------------------------------TTTTTAGGCTATCTAGTCAACCAGAATCTAATACGGGCCGCACACACTCTGTGTCGC----------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................GATTGTCCTGCATTCGGATGTGGCT..............................................................................................................................................................................................................................................................................................................2511.0010000100

Generated: 05/18/2015 at 02:50 AM