ID:

dps_205

 Coordinate:

XL_group1a:3401286-3401324 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.9 -27.8 -27.8

Flybase annnotation

Antisense to exon [dpse_GLEANR_11350:2]; Antisense to CDS [Dpse\GA13915-cds]

No Repeatable elements found

Sense Strand Reads

CTGCATGCCTTACGGCTTCTGCTGATCCTCTGAAGGTTCCTTCGCTGCTGCGACCGTCGTCTCTCTTTTAGAGAGACTGCCGGTGACAGTGGCAGTGCCTGCTCCTGCGGCGGCTCCACTTGAAGAGCTGCTAGTGTTG
***********************************........(((((((..(((((.((((((((...)))))))).)).)))..)))))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M022
male body		 SRR902012
CNS imaginal disc
 GSM444067
head
 M062
head
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 SRR902010
ovaries
....................................................................TGGTGAGACTGCCGGTGAC.................................................... 19 2 1 192.00 192 171 20 0 0 1 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTGACA................................................... 21 1 1 129.00 129 109 16 4 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTGAC.................................................... 20 1 1 110.00 110 96 14 0 0 0 0 0 0 0 0
..............GTTTCTTCTTATCCTCTGAAG........................................................................................................ 21 3 6 70.17 421 419 1 1 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTGA..................................................... 19 1 1 69.00 69 64 4 0 0 1 0 0 0 0 0
................................................................ACTCTAGAGAGACTGCCGGT....................................................... 20 3 2 67.50 135 119 12 2 0 1 1 0 0 0 0
...................................................................CTAAAGAGACTGCCGGTGACA................................................... 21 2 1 65.00 65 47 15 3 0 0 0 0 0 0 0
.....................................................................AGAGAGACTGCCGGTGACA................................................... 19 0 1 64.00 64 58 4 2 0 0 0 0 0 0 0
......................................................................GAGAGACTGCCGGTGACA................................................... 18 0 1 60.00 60 60 0 0 0 0 0 0 0 0 0
......................................................................GTGAGACTGCCGGTGACA................................................... 18 1 1 59.00 59 54 1 0 2 1 1 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTG...................................................... 18 1 1 54.00 54 53 0 0 1 0 0 0 0 0 0
....................................................................TGGTGAGACTGCCGGTGACA................................................... 20 2 1 53.00 53 42 11 0 0 0 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGGT....................................................... 19 2 1 52.00 52 52 0 0 0 0 0 0 0 0 0
...................................................................CTAAAGAGACTGCCGGTGAC.................................................... 20 2 1 43.00 43 23 18 1 0 0 1 0 0 0 0
.....................................................................GGTGAGACTGCCGGTGACA................................................... 19 2 1 35.00 35 35 0 0 0 0 0 0 0 0 0
.....................................................................AGAGAGACTGCCGGTGAC.................................................... 18 0 1 33.00 33 33 0 0 0 0 0 0 0 0 0
...................................................................CTAAAGAGACTGCCGGTGACAA.................................................. 22 3 1 29.00 29 23 6 0 0 0 0 0 0 0 0
.....................................................................AAAGAGACTGCCGGTGACA................................................... 19 1 1 27.00 27 23 3 1 0 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGTGACA................................................... 20 0 1 26.00 26 21 0 3 2 0 0 0 0 0 0
................................................................ACTCTAGAGAGACTGCCGGTGACA................................................... 24 3 1 26.00 26 24 2 0 0 0 0 0 0 0 0
................................................................ACTCTAGAGAGACTGCCGGTGAC.................................................... 23 3 1 23.00 23 21 1 1 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTGACAA.................................................. 22 2 1 23.00 23 19 3 1 0 0 0 0 0 0 0
.....................................................................AGAGAGACTGCCGGTGACAA.................................................. 20 1 1 21.00 21 17 3 0 0 1 0 0 0 0 0
......................................................................GTGAGACTGCCGGTGACAA.................................................. 19 2 1 21.00 21 16 4 0 0 1 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGGTGACA................................................... 23 2 1 20.00 20 18 1 1 0 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGTGAC.................................................... 19 0 1 19.00 19 16 2 0 0 1 0 0 0 0 0
................................................................ACTCTAGAGAGACTGCCGGTGA..................................................... 22 3 1 18.00 18 18 0 0 0 0 0 0 0 0 0
.....................................................................GGTGAGACTGCCGGTGAC.................................................... 18 2 7 17.57 123 121 0 2 0 0 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGG........................................................ 18 2 1 17.00 17 17 0 0 0 0 0 0 0 0 0
......................................................................GAGAGACTGCCGGTGACAA.................................................. 19 1 1 16.00 16 15 1 0 0 0 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGGTGAC.................................................... 22 2 1 16.00 16 14 2 0 0 0 0 0 0 0 0
................................................................ACTCTAGAGAGACTGCCGG........................................................ 19 3 6 15.83 95 92 2 0 0 1 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGGTG...................................................... 20 2 1 15.00 15 15 0 0 0 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGTGA..................................................... 18 0 1 14.00 14 13 0 1 0 0 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGGTGA..................................................... 21 2 1 13.00 13 12 1 0 0 0 0 0 0 0 0
.......................................................................AGAGACTGCCGGTGACAA.................................................. 18 1 1 13.00 13 13 0 0 0 0 0 0 0 0 0
...................................................................CTAAAGAGACTGCCGGTGA..................................................... 19 2 3 12.33 37 28 9 0 0 0 0 0 0 0 0
........................................................................GAGACTGCCGGTGACAAA................................................. 18 2 6 12.33 74 67 0 1 1 3 0 0 0 2 0
.....................................................................AGAGAGACTGCCGGTGACAAGC................................................ 22 3 2 12.00 24 18 3 0 0 1 1 0 1 0 0
...................................................................CTGGTGAGACTGCCGGTGACA................................................... 21 3 3 11.33 34 32 1 1 0 0 0 0 0 0 0
..................................................................TCTGGTGAGACTGCCGGTGACA................................................... 22 3 1 11.00 11 11 0 0 0 0 0 0 0 0 0
................................................................ACTCTAGAGAGACTGCCGGTG...................................................... 21 3 2 9.50 19 18 0 1 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTGACAAG................................................. 23 3 1 9.00 9 8 0 0 0 1 0 0 0 0 0
..................................................................TCTAGAGAGACTGCCGGTGAC.................................................... 21 1 1 9.00 9 8 1 0 0 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGTGACAAGC................................................ 23 3 1 9.00 9 8 1 0 0 0 0 0 0 0 0
........................................................................GAGACTGCCGGTGACAAAC................................................ 19 3 20 8.25 165 162 1 0 0 0 2 0 0 0 0
...................................................................CTGGTGAGACTGCCGGTGAC.................................................... 20 3 8 7.38 59 55 2 0 0 1 1 0 0 0 0
..................................................................TCTAGAGAGACTGCCGGTGACA................................................... 22 1 1 7.00 7 5 2 0 0 0 0 0 0 0 0
..................................................................TCTAAAGAGACTGCCGGTGAC.................................................... 21 2 1 7.00 7 4 3 0 0 0 0 0 0 0 0
....................................................................TAAAGAGACTGCCGGTGACA................................................... 20 1 1 6.00 6 5 1 0 0 0 0 0 0 0 0
..................................................................TCTAAAGAGACTGCCGGTGACA................................................... 22 2 1 6.00 6 3 3 0 0 0 0 0 0 0 0
......................................................................AAGAGACTGCCGGTGACA................................................... 18 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.................................................................CTCTAAAGAGACTGCCGGTGA..................................................... 21 3 1 6.00 6 3 3 0 0 0 0 0 0 0 0
.................................................................CTCTAAAGAGACTGCCGGTGAC.................................................... 22 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0
..................................................................TCTAGAGAGACTGCCGGT....................................................... 18 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
...............TTTCTTCTTATCCTCTGAAG........................................................................................................ 20 3 20 5.85 117 116 0 1 0 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGTGACAA.................................................. 21 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0
....................................................................TAAAGAGACTGCCGGTGAC.................................................... 19 1 1 5.00 5 1 3 1 0 0 0 0 0 0 0
....................................................................TGGTGAGACTGCCGGTGA..................................................... 18 2 5 5.00 25 25 0 0 0 0 0 0 0 0 0
....................................................................TGGTGAGACTGCCGGTGACAA.................................................. 21 3 3 4.67 14 11 3 0 0 0 0 0 0 0 0
..................................................................TCTAGAGAGACTGCCGGTG...................................................... 19 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..................................................................TCTGGTGAGACTGCCGGTGAC.................................................... 21 3 3 4.00 12 11 1 0 0 0 0 0 0 0 0
.................................................................CTCTAGAGAGACTGCCGGTGACAA.................................................. 24 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...................................................................CTAAGGAGACTGCCGGTGAC.................................................... 20 3 4 3.50 14 0 0 0 0 0 8 6 0 0 0
......................................................................GTGAGACTGCCGGTGACAAA................................................. 20 3 11 3.36 37 21 16 0 0 0 0 0 0 0 0
.....................................................................AGAGAGACTGCCGGTGACAAG................................................. 21 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................GAGAGACTGCCGGTGACAAG................................................. 20 2 3 2.67 8 8 0 0 0 0 0 0 0 0 0
.....................................................................GGTGAGACTGCCGGTGACAA.................................................. 20 3 7 2.43 17 17 0 0 0 0 0 0 0 0 0
........................................................................GAGACTGCCGGTGACAAG................................................. 18 2 7 2.43 17 14 1 0 0 2 0 0 0 0 0
................TTCTTCTTATCCTCTGAAG........................................................................................................ 19 2 4 2.25 9 9 0 0 0 0 0 0 0 0 0
................TTCTTCTTATCCTCTGAAGT....................................................................................................... 20 3 17 2.12 36 32 3 1 0 0 0 0 0 0 0
.......................................................................TGAGACTGCCGGTGACAA.................................................. 18 2 2 2.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................AAAGAGACTGCCGGTGAC.................................................... 18 1 2 2.00 4 3 1 0 0 0 0 0 0 0 0
....................................................................TAAAGAGACTGCCGGTGA..................................................... 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................TCTAGAGAGACTGCCGGTGACAA.................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................AAAGAGACTGCCGGTGACAA.................................................. 20 2 2 2.00 4 4 0 0 0 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGT....................................................... 16 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
....................................................................TAGAGAGACTGCCGGTGACAAG................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTCTAAAGAGACTGCCGGTGACA................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................TCTAAAGAGACTGCCGGT....................................................... 18 2 3 1.33 4 4 0 0 0 0 0 0 0 0 0
..................................................................TCTGGTGAGACTGCCGGTGA..................................................... 20 3 5 1.20 6 6 0 0 0 0 0 0 0 0 0
.................................................................CTCTATAGAGACTGCCGGTGACA................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................CGAGAGAGACTGCCGGTGAC.................................................... 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................................................CTAGTAAGACTGCCGGTGAC.................................................... 20 3 2 1.00 2 0 0 0 2 0 0 0 0 0 0
....................................................................TAGGGAGACTGCCGGTGACA................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTGGTGAGACTGCCGGTGAC.................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................AAGAGACTGCCGGTGACAA.................................................. 19 2 3 1.00 3 3 0 0 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGGGACA................................................... 21 2 2 1.00 2 0 0 2 0 0 0 0 0 0 0
....................................................................TAATGAGACTGCCGGTGACA................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................TCTAAAGAGACTGCCGGTG...................................................... 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................TTCTAAAGAGACTGCCGGTGACAA.................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................AATTAGAGAGACTGCCGGTGACA................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................GTAGAGAGACTGCCGGTGA..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................CCTCTAGAGAGACTGCCGGTG...................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................TACTAGAGAGACTGCCGGTGA..................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTCTGGAGAGACTGCCGGTGAC.................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................GAGAGACTGCCGCTGACA................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................TAAAGAGACTGCCGGTGACAA.................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................TCTAGAGAGACTGCCGGTGA..................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................TACAGAGACTGCCGGTGAA.................................................... 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................................TCTAAAGAGACTGCCGGTGACAA.................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............GGTTTCTTCTTATCCTCTGAAG........................................................................................................ 22 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGTGACG................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................CTAGAGGGACTGCCGGTGACA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................GTGAGACTGCCGGTGAC.................................................... 17 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................GAGAGACTGACGGTGACA................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............GCTTCTTCTTATCCTCTGAAG........................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................GTAAGACTGCCGGTGACA................................................... 18 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................AGTGAGACTGCCGGTGAC.................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................AAGGTTCCTTCGCTGCTGCGACC.................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................CTAGAGACTGCCGGTGACA................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................ATTCTAGAGAGACTGCCGGTGAC.................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................TCTAAAGAGACTGCCGGTGA..................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................CTCTAAAGAGACTGCCGGT....................................................... 19 3 15 0.93 14 14 0 0 0 0 0 0 0 0 0
.....................................................................AAAGAGACTGCCGGTGACAAG................................................. 21 3 7 0.71 5 3 1 0 0 0 0 0 1 0 0
.......................................................................AGAGACTGCCGGTGACAAG................................................. 19 2 5 0.60 3 3 0 0 0 0 0 0 0 0 0
...................................................................CTAAGGAGACTGCCGGTGACA................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
...................................................................CTATAGAGACTGCCGGTG...................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGGGGAC.................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................................................................CTAAAGAGACTTCCGGTGACA................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.......................TATGGTCTGAAGGTTCCTTCG............................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.....................................................................AGTAAGACTGCCGGTGACAA.................................................. 20 3 4 0.50 2 0 0 0 2 0 0 0 0 0 0
..................................................................TCTATAGAGACTGCCGGT....................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...................................................................CTAGAGAGACTGCCGG........................................................ 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTCTAAAGAGACTGCCGGTG...................................................... 20 3 5 0.40 2 2 0 0 0 0 0 0 0 0 0
...................................................................CTAATGAGACTGCCGGTGAC.................................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................................................GATAGACTGCCGGTGACAA.................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................TTCTTCTTATCCTCTGAAGTT...................................................................................................... 21 3 7 0.29 2 2 0 0 0 0 0 0 0 0 0
.....................................................................CTAGAGACTGCCGGTGACAA.................................................. 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTCTAAAGAGACTGCCGGT....................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................AGAGACTGCCGGTGACAAAAG............................................... 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0
......................................................................GAGAGACTGCCGGTGAGT................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
.....................................................................AAAGAGACTGCCGGTGAG.................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
....................................................................TGGTGAGACTGTCGGTGACA................................................... 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0
......................................................................GTGAGACTGCCGGCGACA................................................... 18 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
....................................................................TGGTGAGACCGCCGGTGAC.................................................... 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0
....................................................................TAAGGAGACTGCCGGT....................................................... 16 2 19 0.05 1 0 0 0 0 0 0 0 0 0 1
.........................................................................AGACTGCCGGTGACAAGCG............................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................................GTAAGACTGCCGGGGACA................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..........................................................................GAATGGCGGTGACAGTGG............................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
....................................................................GGGTGAGACTGCCGGTGAC.................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

---------##################################################################################################################################
GACGTACGGAATGCCGAAGACGACTAGGAGACTTCCAAGGAAGCGACGACGCTGGCAGCAGAGAGAAAATCTCTCTGACGGCCACTGTCACCGTCACGGACGAGGACGCCGCCGAGGTGAACTTCTCGACGATCACAAC
***********************************........(((((((..(((((.((((((((...)))))))).)).)))..)))))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M022
male body
.............CCAAAGAAGAATAGGAGACTTC........................................................................................................ 22 3 3 15.33 46 42 1 3
..............CAAAGAAGAATAGGAGACTTC........................................................................................................ 21 3 6 4.50 27 26 1 0
.....................GACTAGATGACTTCCAAGAAA................................................................................................. 21 3 1 2.00 2 1 1 0
............ACCGAAGAAGAATAGGAGACTT......................................................................................................... 22 3 1 1.00 1 1 0 0
................AAGAAGAATAGGAGACTTC........................................................................................................ 19 2 4 1.00 4 4 0 0
................AAGAAGAATAGGAGACTTCA....................................................................................................... 20 3 17 0.47 8 8 0 0
............CCCGAAGAAGAATAGGAGACT.......................................................................................................... 21 3 6 0.33 2 2 0 0
..............CCAAGAAGAATAGGAGACTTC........................................................................................................ 21 3 4 0.25 1 1 0 0
.................AGAAGAATAGGAGACTTC........................................................................................................ 18 2 9 0.11 1 1 0 0
...............AAAGAAGAATAGGAGACTTC........................................................................................................ 20 3 20 0.10 2 2 0 0
.........................AGGAGACTTTAAAGGATGCG.............................................................................................. 20 3 11 0.09 1 0 1 0
...................................................................................................ACGACGACGCCGCCTGGGTGA................... 21 3 17 0.06 1 1 0 0
....................GGACTAGATGACTTCCAAG.................................................................................................... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:3401236-3401374 - dps_205 CTGCATGCCT--------------------T---ACGGCTTCTGCT---------------GATCC-------TCTGAAGGT---TCCTTCGC---------TGCTGCGAC------------------CG----------TCG------TCTCTCTTTTAGAGAGACTGCC---GG----TGAC--AGTG--GCAG------------------TGCCTGCTCCTGCGGCGGCTC--------CACTTGAA---GAGCTGCTAGTGTTG
droPer2 scaffold_77:103663-103801 + dpe_293 CTGCATGCCT--------------------T---ACGGCTTCTGCT---------------GATCC-------TCTGAAGGT---TCCTTCGC---------TGCTGCGAC------------------CG----------TCG------TCTCTCTTTTAGAGAGACTGCC---GG----TGAC--AGTG--GCAG------------------TGCCTGCTCCTGCGGCGGCTC--------CACTTGAA---GAGCTGCTAGTGTTG
droWil2 scf2_1100000003789:1888-2019 + TTGCATTCGC--------------------T---GCTGCTGTTGCT---------------GTTGC------------TGATGCTGCTGTTGC---------TGCTGCTGT------TGTTGTTGCTGCTG----------TTGTTGCTG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AATT---GTTGCTGCTGCAG--------TT--GTTG---TTGCTGTTGTTGTTG
droVir3 scaffold_13042:2617024-2617161 + CTGCGGCCGT--------------------T---GTTGCTGCTGCTGTGCCCT---TT---G---------------TTGTT---GCTGTTGG---------GGCCGTTGTTGCATA---TGTGGGGGCAA----------CTGTTGCTG--------------------C---T-------GC---TGTG--GCCGTTG---T------------TGTT---GCTGCTGTGGCCT--------TT--GTTGGTGCAACTGTTGCTGTTG
droMoj3 scaffold_6473:10898333-10898473 - CTGCTGCTGT--------------------T---GCTGCTGTTGTTGCTGCTG---CT---G---------------TTGCT---GCTGCTGC---------TGCTGCTGCTGCTGTTGCTGCTGCTGCTG----------CTGCTG-----------------------CTGCT-------GCTGCTGCT--GCTG------------------TTGCTGCTGCTGCTGCTGCTG--------CT--GTTG---CTGCTGCTGCTGTTG
droGri2 scaffold_98:884-1018 + CTGCTGTTTT--------------------A---ACTGCTCCTGCTGCTGCTG---CT---G---------------ATGAT---GTTGACGC---------TGCTGCTGCTGCTGC---TGTTGGTGCTG----------CTGCTGCTG--------------------C---T-------GC---TGCT--GCCGCTG---C------------TGCT---GCTGCCGCTGCTG--------CT--GCTG---CTGCTGCCGCTGCTG
droAna3 scaffold_13248:3481163-3481302 + T-GCAGGACC--------------------T---GCTGTTGCTGTTGGTGCTGGTGCTGCTG---------------GTGCT---TCTGTTGC---------------------------TGCTGCTGCTG----------TTGTTGTTG--------------------C---T-------GCTGCTGCT--GCTGC--TGG-TGAAGCACCACCGCCT---GCTGTTGCTGCTG--------CT--GCTG---GGACTGCTGCTGTTG
droBip1 scf7180000395895:27109-27231 - GC----------------------------T---GCTGCTGCCGCT---------------GA---------------TGCC---GCCGCCGC---TGCCACGGCTGC-AT------TGTTGCTGCTGCTG----------CTGTTGCTG--------------------C---C-------GCCGGCACT--GCCGCTG---C------------TGTT---GCTGCTGTTGCCG--------CC--GGCG---TTGCTACTATTGCTG
droKik1 scf7180000302401:199846-199989 - CTGCAGTTGT--------------------T---GCTGCTGCTGCT---------------GCTTCTTTACCGCC---TTCAGTAATTCCAGT------AGTTCCTTTTGTTGT------TTCTGCCTTTG----------TTGTTG-----------------------T---T-------GTTGCTGCA--GTTGC------TG---------TCTTTGCTTTATTAGCTGCTC--------CA--GAAG---CTTCTGCTGTTTTCG
droFic1 scf7180000453829:1093178-1093321 - CTGTTGGAGT--------------------T---GCTGCTGCTGTTGCTCCTG---CT---G---------------CAATT---GCTGTTGT---------TGCTTCTGCTGAAAT---TGCTGTAGTTG----------CTGATGCTG--------------------C---T-------GT-----------TGT--TGC-TGTTGCTGCAGTGTCTGTTGCTGCTGTTGTTG--------TA--TTTG---GTGCTGTTGTTGTTG
droEle1 scf7180000490564:1746098-1746218 - CTGTATCGTT--------------------T---ATGGCCGCTGCCGCCGCAT---CG-------------------AAACT-------TTGC---AGC---T---C-----------------------------GGCAC-----------------T----CAGATCGCTTTCGC----TGA----ACT--TCAGTTG---C------------GTTT---G-----GCTGCTCATCAGCGAGT--TGAG---CAGCTGCTCCTGTTG
droRho1 scf7180000779985:69238-69372 + AAATCT---------------TAGGATTGTT------GCTGATGTTG---------CTGCTG---------------TTGCT---GCTGTTGC---------TGCTGCTGC------------------TG----------TGG------TGTCTGATCCTCGGAAGTTGCA---GC----TGTTGCC-TC--GCTT------T------------TCTT---GTTGCTGTTGCTG--------CT--GTAG---CTGCTGCTGCTGCTG
droBia1 scf7180000301760:2681338-2681469 + TTGCTGCTGT--------------------T---GCTGATGCTGCT---------------CTT---------------GCT---TCTGTTGCTCTTGC---TTCTGTTGC------TGTTCCTGCTGCTG----------AAATTGCTG--------------------C---A-------TTTGCTGTT--GCAGT------T---CC------TGCT---GCTGTTGCTGCTG--------TT--GATT---GGGTTGCTGATGTTG
droTak1 scf7180000413903:84835-84963 + ATATCT---------------TAGGATTG---------TGCCTGCT---------------GATCA-------TCTGCAGTT---GTAGTTGT---------TGTTGCTTC------------------CG----------TTGCTGTTGCCTCTCGTTTTGTGTTGTTGC---------------------------------T---GG------AACTGATGTTGCTGCTGCTG--------TT--GTTG---CTGCTGCTGCTGTTG
droEug1 scf7180000409110:993973-994093 - TTGCTGCTGT--------------------G---CC---GCCTGCT---------------GATCA-------TCGGCAGTT---GCTGCTGC---------TGCGGCTAC------------------TA----------CTGTTGCTG------CCTCA----------------------CGTTTCGT--GTTGC------T---AG------TACT---GCTGTTGCTGTTG--------CT--GCTA---GTGCTGGTATTGCTG
dm3 chrX:12602498-12602623 - TTGCATGTACTCTATTTACTTTAGGATTGTTGTTGTTGTTGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------TGCTGCTGCTG----------CCGCTGCTG--------------------C---------------------------------------------CGCT---GCTGCTGCTGCTG--------TT--GTTG---TTGCTGCTGTTGTTG
droSim2 x:11958117-11958251 - TTGCATGTGCTCTATTTACTTTAGGATTGTT---GTGTTGTCTGCT---------------GATCG-------TC-GCGTTT---CGCGTTGT---------------------------TGTTGCTGCCG----------TTGTTGCTG--------------------C---C-------GTTGCTGCT--GCTGC---------------------T---GCTTGTGTTGCTG--------CT--GCTG---TTGTTGCTCGTGTTG
droSec2 scaffold_15:1216778-1216893 + CGGCATTTGT--------------------T---GCACCTGCTGCT---------------GCTGG------------A-T------TACCGC---TGC---T------------TG---TTTTGGACATG----------CTG--------------------------CT---GC----CGAC--GCTAGTGTTGCTG---C------------TGCT---GCTGCTGCTGCTA--------CT--GCAG---CTGCTGCTGCTGCTG
droYak3 2L:9710234-9710365 - CTGCAATTGT--------------------T---GCTGCTGTTGCT---------------GCTGC------------TGCA---ATTGTTGC---TGCTGCTGCTGCAAT---------TGTTGCTGCTG----------TTGTTGCTG--------------------C---T-------GCAGTTGTT--GCTGC------T---GG------AACT---GCTGTTGCTGCAG--------CT--GCTG---GAGCTGTTGCTGCTG
droEre2 scaffold_4770:15789295-15789436 + CCATGT--GC--------------------T---GTTGCTGCTGCA------G---CG---GATT--------GCTGCCGTT---GCTTCCGT---------TGCTGTGGT---------TGTTGCTGTTGTTTTGGGCAA-----------------C----CAGGTTGCC---GGCAGTTGTC--TGTG--GATG------T------------GGAT---GTTGCTGCTGGTG--------GC--CGCG---CATCGGCTGGTGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTGCATGCCT--------------------T---ACGGCTTCTGCT---------------GATCC-------TCTGAAGGT---TCCTTCGC---------TGCTGCGAC------------------CG----------TCG------TCTCTCTTTTAGAGAGACTGCC---GG----TGAC--AGTG--GCAG------------------TGCCTGCTCCTGCGGCGGCTC--------CACTTGAA---GAGCTGCTAGTGTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--A..................................................................................19164.006425800004000
.................................................................................................................................................................GAGAGACTGCC---GG----TGAC--A..................................................................................18160.006006000000000
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--...................................................................................18133.003303300000000
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--A..................................................................................20126.002632100000002
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AA.................................................................................20121.002101700013000
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--...................................................................................19119.001901600012000
.................................................................................................................................................................GAGAGACTGCC---GG----TGAC--AA.................................................................................19116.001601500001000
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGA......................................................................................18114.001411300000000
..................................................................................................................................................................AGAGACTGCC---GG----TGAC--AA.................................................................................18113.001301300000000
...................................................................................................................................................................GAGACTGCC---GG----TGAC--AAA................................................................................18612.337416700230001
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AAGC--.............................................................................22212.002401801013010
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--AAGC--.............................................................................2319.0090800001000
...................................................................................................................................................................GAGACTGCC---GG----TGAC--AAAC--.............................................................................19208.25165016202001000
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--AA.................................................................................2115.0050500000000
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AAG................................................................................2113.0030300000000
.................................................................................................................................................................GAGAGACTGCC---GG----TGAC--AAG................................................................................2032.6780800000000
...................................................................................................................................................................GAGACTGCC---GG----TGAC--AAG................................................................................1872.431701400021000
...............................................................................................................................................................TAGAGAGACTGCC---GG----T........................................................................................1612.0020000000002
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--AAG................................................................................2212.0020200000000
.............................................................................AAGGT---TCCTTCGC---------TGCTGCGAC------------------C............................................................................................................................................2311.0010100000000
..................................................................................................................................................................AGAGACTGCC---GG----TGAC--AAG................................................................................1950.6030300000000
.................................................................................................................................................................GAGAGACTGCC---GG----TGAG--T..................................................................................1870.1410100000000
droPer2
CTGCATGCCT--------------------T---ACGGCTTCTGCT---------------GATCC-------TCTGAAGGT---TCCTTCGC---------TGCTGCGAC------------------CG----------TCG------TCTCTCTTTTAGAGAGACTGCC---GG----TGAC--AGTG--GCAG------------------TGCCTGCTCCTGCGGCGGCTC--------CACTTGAA---GAGCTGCTAGTGTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................GAGAGACTGCC---GG----TGAC--A..................................................................................18125.00250180061
.................................................................................................................................................................GAGAGACTGCC---GG----TGAC--AA.................................................................................19124.00241500612
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--...................................................................................19116.0016070045
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--A..................................................................................19114.0014040145
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AAGC--.............................................................................2229.0018050067
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--AAGC--.............................................................................2317.007020014
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--A..................................................................................2017.007010033
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AA.................................................................................2017.007040012
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--AA.................................................................................2116.006030021
.................................................................................................................................................................GAGAGACTGCC---GG----TGAC--AAG................................................................................2026.0012040017
..................................................................................................................................................................AGAGACTGCC---GG----TGAC--AA.................................................................................1815.005030020
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGA......................................................................................1814.004000022
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--...................................................................................1814.004010030
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGAC--AAG................................................................................2213.003000003
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AAG................................................................................2112.002000011
...................................................................................................................................................................GAGACTGCC---GG----TGAC--AAG................................................................................1881.5012040053
..................................................................................................................................................................AGAGACTGCC---GG----TGAC--AAG................................................................................1951.206040011
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--AACC--.............................................................................2211.001010000
................................................................................................................................................................AGAGAGACTGCC---GG----TGAC--G..................................................................................1911.001100000
...............................................................................................................................................................TAGAGAGACTGCC---GG----TGG......................................................................................1811.001000001
...................................................................................................................................................................GAGACTGCC---GG----TGAC--AAA................................................................................1860.674201001
...................................................................................................................................................................GAGACTGCC---GG----TGAC--AAAC--.............................................................................19200.204040000
droWil2
TTGCATTCGC--------------------T---GCTGCTGTTGCT---------------GTTGC------------TGATGCTGCTGTTGC---------TGCTGCTGT------TGTTGTTGCTGCTG----------TTGTTGCTG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AATT---GTTGCTGCTGCAG--------TT--GTTG---TTGCTGTTGTTGTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------TT--G.....................23202.25450300150
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTG...........................................23200.8517015020
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------T.........................21200.6513010030
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGC..........................................24200.6012012000
....................................................................................TGCTGTTGC---------TGCTGCTGT------TGTTGT...................................................................................................................................................24200.5010010000
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------TT--......................22200.501009010
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTG...........................................20200.45900090
....................................................................................TGCTGTTGC---------TGCTGCTGT------TGTTGTTG.................................................................................................................................................26200.40808000
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---TTGC...........24200.40808000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTG........................................26200.35707000
...................................................................................................................................................................................................TGC------T---GC------AATT---GTTGCTGCTGCAG--------..........................23200.35707000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTG........................................23200.35707000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGCTG.....................................26200.30606000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGC.......................................24200.25505000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGC..........................................21200.25502030
.................................................................................................................................................................................................................................TGCTGCTGCAG--------TT--GTTG---TTGCTG.........23200.25505000
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---TTGCT..........25200.20404000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AATT---...............................................25200.20404000
..............................................................................................................................................................................................T--GTTGC------T---GC------AATT---GTTGCTGCTG.....................................23200.15303000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCT.........................................25200.15303000
.......................................................................................................................................................................................................................................TGCAG--------TT--GTTG---TTGCTGTTGTTG...23200.15303000
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------TT--GTTG---...............26200.15303000
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------..........................20200.15302010
..............................................................................................................................................................................................T--GTTGC------T---GC------AATT---GTTGCTGCTGC....................................24200.15303000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTAA.......................................27200.15303000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AA....................................................23200.10202000
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------TT--GTT...................25200.10202000
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---TT.............22200.10200020
.................................................................................................................................................................................................................................TGCTGCTGCAG--------TT--GTTG---TTGC...........21200.10202000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------A.....................................................22200.10200020
....................................................................................TGCTGTTGC---------TGCTGCTGT------TGTTG....................................................................................................................................................23200.10200020
..........................................................................................TGC---------TGCTGCTGT------TGTTGTTGCTGC.............................................................................................................................................24200.10202000
.....................................................................................GCTGTTGC---------TGCTGCTGT------TGTTGTTG.................................................................................................................................................25200.10202000
.................................................................................................................................................................................................................C------AATT---GTTGCTGCTGCAG--------TT--GTTG---...............24200.10202000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AAA...................................................24200.10202000
............................................................................................................................................................................................................T---GC------AATT---GTTGCTGCTGCAG--------TT--GT....................24200.10202000
.......................................................................................TGTTGC---------TGCTGCTGT------TGTTGTTGCT...............................................................................................................................................25200.10202000
..............................................................................................................................................TGTTGCTG--------------------C---T-------GTTGCTGTT--GTTG.........................................................................23200.10202000
......................................................................................................TGCTGCTGT------TGTTGTTGCTGCTG----------.................................................................................................................................23200.10202000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTGC.......................................27200.10202000
..............................................................................................................................................................................T-------GTTGCTGTT--GTTGC------T---GC------AATT---GTTG...........................................26200.10202000
.................................................................................................................................................................................................................................TGCTGCTGCAG--------TT--GTTG---TTGCT..........22200.10202000
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---TTG............23200.10200020
..........................................................................................................................................................................................................................TT---GTTGCTGCTGCAG--------TT--GTTG---TTG............24200.10202000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTT............................................22200.10202000
.................................................................................................................................................................................................................................TGCTGCTGCAG--------TT--GTTG---TTG............20200.10202000
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---...............20200.05101000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTAG.......................................27200.05101000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGCTTA....................................27200.05101000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTTT.......................................27200.05101000
.................................................................................................................................................................................................................................TGCTGCTGCAG--------TT--GTTG---TTGCTGTTG......26200.05101000
.......................................................................................................................................................................................TTGCTGTT--GTTGC------T---GC------AATT---GTT............................................23200.05101000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AATT---G..............................................26200.05100001
..........................................................................................................................TTGCTGCTG----------TTGTTGCTG--------------------....................................................................................................18200.05100010
.......................................................................................................................................................................................................................................TGCAG--------TT--GTTG---TTGCTGTTGTTGTTG26200.05101000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTGG.......................................27200.05101000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTGTA......................................28200.05101000
...............................................................................................................................................................................................................................GTTGCTGCTGCAG--------TT--GTTG---T..............20200.05100010
.............................................................................................................................................................................................TT--GTTGC------T---GC------AATT---GTTGCTGCT......................................23200.05101000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGCT......................................25200.05101000
....................................................................................................................................................................................................................................................TT--GTTG---TTGCTGTTGTTG...18200.05100010
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---TTGCTT.........26200.05101000
..........................................................................................................................................................................................................................TT---GTTGCTGCTGCAG--------TT--GTTG---TTGCTA.........27200.05101000
..................................................................................................................................................................................................................................GCTGCTGCAG--------TT--GTTG---TTG............19200.05101000
...........................................................................................................................................................................................................................T---GTTGCTGCTGCAG--------TT--GTTG---TTGCTGT........27200.05101000
.............................................................................................................................................TTGTTGCTG--------------------C---T-------GTTGCTGTT--GTTG.........................................................................24200.05101000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGCTT.....................................26200.05101000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCT.........................................22200.05101000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---..............................................................19200.05101000
.......................................................................................................................................................................................TTGCTGTT--GTTGC------T---GC------AATT---GTTGCTG........................................27200.05101000
....................................................................................................................................................TG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AT....................................................23200.05100010
............................................................................................................................................................................................GTT--GTTGC------T---GC------AATT---GTTGC..........................................20200.05101000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---GTTGCTT........................................26200.05101000
..........................................................................................................................................................................................................................................AG--------TT--GTTG---TTGCTGTTGTT....19200.05100010
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGCA......................................25200.05101000
...................................................................................................................................................................................................TGC------T---GC------AATT---GTTGCTGCTGCAG--------TT--......................25200.05101000
...................................................................................................................................................................................................TGC------T---GC------AATT---GTTGCTGCTGCAG--------TT--G.....................26200.05101000
................................................................................................................................................................................................................GC------AATT---GTTGCTGCTGCAG--------TT--G.....................22200.05101000
...............................................................................................................................................................................................................................GTTGCTGCTGCAG--------TT--GTTG---TTGC...........23200.05101000
.........................................................................................................................................................................................GCTGTT--GTTGC------T---GC------AATT---GTTGC..........................................23200.05101000
.........................................................................................................................................................................................GCTGTT--GTTGC------T---GC------AATT---GTTG...........................................22200.05101000
..............................................................................................................................TGCTG----------TTGTTGCTG--------------------C---T-------GTTGC...................................................................................21200.05100001
....................................TGCTGTTGCT---------------GTTGC------------TGATG...........................................................................................................................................................................................20200.05101000
............................................................................................................................................................................................GTT--GTTGC------T---GC------AATT---GTTGCTG........................................22200.05101000
.................................................................................................................................................TGCTG--------------------C---T-------GTTGCTGTT--GTTGC------T---GC------AA....................................................26200.05101000
........................................................................................................................................................................................TGCTGTT--GTTGC------T---GC------AATT---G..............................................20200.05101000
....................................TGCTGTTGCT---------------GTTGC------------TGATGC..........................................................................................................................................................................................21200.05101000
................................................................................................................................................................................................................................TTGCTGCTGCAG--------TT--GTTG---TTGCTG.........24200.05110000
...........................................................................................................................................................................................TGTT--GTTGC------T---GC------AATT---GTTGCTGGA......................................25200.05110000
..........................................................................................................................................................................................CTGTT--GTTGC------T---GC------AATT---GTTGCT.........................................23200.05101000
......................................................................................................................................................................................................................................CTGCAG--------TT--GTTG---TTGCTA.........18200.05100010
.......................................................................................................................................................................................................................................TGCAG--------TT--GTTG---TTGCTGTTGTTGT..24200.05101000
droVir3
CTGCGGCCGT--------------------T---GTTGCTGCTGCTGTGCCCT---TT---G---------------TTGTT---GCTGTTGG---------GGCCGTTGTTGCATA---TGTGGGGGCAA----------CTGTTGCTG--------------------C---T-------GC---TGTG--GCCGTTG---T------------TGTT---GCTGCTGTGGCCT--------TT--GTTGGTGCAACTGTTGCTGTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CTGCTGCTGT--------------------T---GCTGCTGTTGTTGCTGCTG---CT---G---------------TTGCT---GCTGCTGC---------TGCTGCTGCTGCTGTTGCTGCTGCTGCTG----------CTGCTG-----------------------CTGCT-------GCTGCTGCT--GCTG------------------TTGCTGCTGCTGCTGCTGCTG--------CT--GTTG---CTGCTGCTGCTGTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTGCTGTTTT--------------------A---ACTGCTCCTGCTGCTGCTG---CT---G---------------ATGAT---GTTGACGC---------TGCTGCTGCTGCTGC---TGTTGGTGCTG----------CTGCTGCTG--------------------C---T-------GC---TGCT--GCCGCTG---C------------TGCT---GCTGCCGCTGCTG--------CT--GCTG---CTGCTGCCGCTGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
T-GCAGGACC--------------------T---GCTGTTGCTGTTGGTGCTGGTGCTGCTG---------------GTGCT---TCTGTTGC---------------------------TGCTGCTGCTG----------TTGTTGTTG--------------------C---T-------GCTGCTGCT--GCTGC--TGG-TGAAGCACCACCGCCT---GCTGTTGCTGCTG--------CT--GCTG---GGACTGCTGCTGTTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................TGTTG--------------------C---T-------GCTGCTGCT--GCTGC--......................................................................21200.051100000
..............................................................................................................................TGCTG----------TTGTTGTTG--------------------C---T-------GCT.....................................................................................19200.051100000
...............................................................................................................................................GTTGTTG--------------------C---T-------GCTGCTGCT--GCTGC--......................................................................23200.051100000
droBip1
GC----------------------------T---GCTGCTGCCGCT---------------GA---------------TGCC---GCCGCCGC---TGCCACGGCTGC-AT------TGTTGCTGCTGCTG----------CTGTTGCTG--------------------C---C-------GCCGGCACT--GCCGCTG---C------------TGTT---GCTGCTGTTGCCG--------CC--GGCG---TTGCTACTATTGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
CTGCAGTTGT--------------------T---GCTGCTGCTGCT---------------GCTTCTTTACCGCC---TTCAGTAATTCCAGT------AGTTCCTTTTGTTGT------TTCTGCCTTTG----------TTGTTG-----------------------T---T-------GTTGCTGCA--GTTGC------TG---------TCTTTGCTTTATTAGCTGCTC--------CA--GAAG---CTTCTGCTGTTTTCGSizeHit CountTotal NormTotal
No Reads
droFic1
CTGTTGGAGT--------------------T---GCTGCTGCTGTTGCTCCTG---CT---G---------------CAATT---GCTGTTGT---------TGCTTCTGCTGAAAT---TGCTGTAGTTG----------CTGATGCTG--------------------C---T-------GT-----------TGT--TGC-TGTTGCTGCAGTGTCTGTTGCTGCTGTTGTTG--------TA--TTTG---GTGCTGTTGTTGTTGSizeHit CountTotal NormTotal
No Reads
droEle1
CTGTATCGTT--------------------T---ATGGCCGCTGCCGCCGCAT---CG-------------------AAACT-------TTGC---AGC---T---C-----------------------------GGCAC-----------------T----CAGATCGCTTTCGC----TGA----ACT--TCAGTTG---C------------GTTT---G-----GCTGCTCATCAGCGAGT--TGAG---CAGCTGCTCCTGTTGSizeHit CountTotal NormTotal
No Reads
droRho1
AAATCT---------------TAGGATTGTT------GCTGATGTTG---------CTGCTG---------------TTGCT---GCTGTTGC---------TGCTGCTGC------------------TG----------TGG------TGTCTGATCCTCGGAAGTTGCA---GC----TGTTGCC-TC--GCTT------T------------TCTT---GTTGCTGTTGCTG--------CT--GTAG---CTGCTGCTGCTGCTGSizeHit CountTotal NormTotal
No Reads
droBia1
TTGCTGCTGT--------------------T---GCTGATGCTGCT---------------CTT---------------GCT---TCTGTTGCTCTTGC---TTCTGTTGC------TGTTCCTGCTGCTG----------AAATTGCTG--------------------C---A-------TTTGCTGTT--GCAGT------T---CC------TGCT---GCTGTTGCTGCTG--------TT--GATT---GGGTTGCTGATGTTGSizeHit CountTotal NormTotal
No Reads
droTak1
ATATCT---------------TAGGATTG---------TGCCTGCT---------------GATCA-------TCTGCAGTT---GTAGTTGT---------TGTTGCTTC------------------CG----------TTGCTGTTGCCTCTCGTTTTGTGTTGTTGC---------------------------------T---GG------AACTGATGTTGCTGCTGCTG--------TT--GTTG---CTGCTGCTGCTGTTGSizeHit CountTotal NormTotal
No Reads
droEug1
TTGCTGCTGT--------------------G---CC---GCCTGCT---------------GATCA-------TCGGCAGTT---GCTGCTGC---------TGCGGCTAC------------------TA----------CTGTTGCTG------CCTCA----------------------CGTTTCGT--GTTGC------T---AG------TACT---GCTGTTGCTGTTG--------CT--GCTA---GTGCTGGTATTGCTGSizeHit CountTotal NormTotal
No Reads
dm3
TTGCATGTACTCTATTTACTTTAGGATTGTTGTTGTTGTTGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------TGCTGCTGCTG----------CCGCTGCTG--------------------C---------------------------------------------CGCT---GCTGCTGCTGCTG--------TT--GTTG---TTGCTGCTGTTGTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................TGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTT...................................................................................................................................................................................26113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001100000
..........................................TGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------......................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000303000000
..........TCTATTTACTTTAGGATTGTTGTTGT..........................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000010000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................TACTTTAGGATTGTTGTTGTTGTTGC....................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000100000
....................................TGTTGCTGCT---------------GATCG-------TC-GCGTT.............................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACTTTAGGATTGTTGTTGTTG........................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000100000000000000000
.......TACTCTATTTACTTTAGGATTGTTGT.............................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
....................................TGTTGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTT...................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
...............................................................TCG-------TC-GCGTTT---CGCGTGGT---------------------------TGCTGC................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..............TTTACTTTAGGATTGTTGTTGTTGTT......................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.................................TGTTGTTGCTGCT---------------GATCG-------TC-GCGT..............................................................................................................................................................................................2413.0030000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................TTGTTGCTGCT---------------GATCG-------TC-GCGT..............................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGCT---------------GATCG-------TC-GCGTTT---CGCGTGG..................................................................................................................................................................................2413.0030000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TGCTGCTGCTG--------TT--GTTG---...............17202.5551000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCATGTACTCTATTTACTTTAGGA....................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TACTTTAGGATTGTTGTTGTTG........................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTG...................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............TTACTTTAGGATTGTTGTTGT..........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000
..............................TGTTGTTGTTGCTGCT---------------GATCG-------TC-GCGT..............................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
............TATTTACTTTAGGATTGTTGTTGTT.........................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........TCTATTTACTTTAGGATTGTTGTTG...........................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..................................GTTGTTGCTGCT---------------GATCG-------TC-GCGTT.............................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................TTAGGATTGTTGTTGTTGTTGC....................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................GCTGCT---------------GATCG-------TC-GCGTTT---CGCGTT...................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...........................TGTTGTTGTTGTTGCTGCT---------------G................................................................................................................................................................................................................20201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000002000000000000000000000000
......................................TTGCTGCT---------------GATCG-------TC-GCGTTT---CGC......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GCGTGGT---------------------------TGCTGCTGCT............................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TATTTACTTTAGGATTGTTGTTGT..........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............TTTACTTTAGGATTGTTGTTGTTG........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTACTTTAGGATTGTTGTTGTTGTTG.....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................GTTGCTGCT---------------GATCG-------TC-GCGTT.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCTATTTACTTTAGGATTGTTGTTGTTG........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................TGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------T.....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................CTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------T.....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................TTTAGGATTGTTGTTGTTGTTGCTGC.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................TGTTGTTGTTGCTGCT---------------GATCG-------TC-GCAA..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................TGTTGTTGTTGCTGCT---------------GATCG-------TC-..................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................CTGCT---------------GATCG-------TC-GCGTTT---CGCGTT...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................GCTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................CTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------......................................................................................................................................................2611.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GTTT---CGCGTGGT---------------------------TGCTGCTG..............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................TTAGGATTGTTGTTGTTGTTGCTGC.................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................ACTTTAGGATTGTTGTTGTTGTTGC....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................TTGTTGCTGCT---------------GATCG-------TC-GCGTTT---C........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............TATTTACTTTAGGATTGTTGTTGTTG........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................T---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------TGC...................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTTAGGATTGTTGTTGTTGTTGCT...................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......TACTCTATTTACTTTAGGATTGTTG..............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTAGGATTGTTGTTGTTGT.......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTACTTTAGGATTGTTGTTG...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTT...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................TGCTGCT---------------GATCG-------TC-GCGTTT---CGCGT....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................GTTGTTGCTGCT---------------GATCG-------TC-GCGT..............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGTTGTTGCTGCT---------------GATCG-------TC-GCGTTT---.........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................TTTAGGATTGTTGTTGTTGTTG.....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAGGATTGTTGTTGTTGTTGCTGC.................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------T.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGTTGCTGCT---------------GATCG-------TC-GCGTTT---CGA......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................TGTTGCTGCT---------------GATCG-------TC-GCGT..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTTAGGATTGTTGTTGTTGTTGC....................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................GCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------......................................................................................................................................................2411.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGCT---------------GATCG-------TC-GCGTTT---CGCGTG...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGCTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------......................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
................TACTTTAGGATTGTTGTTGTTGTTGCT...................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCATGTACTCTATTTACTTTAGGAT...................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TC-GCGTTT---CGCGTGGT---------------------------TGCTGCTG..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TACTTTAGGATTGTTGTTGTTGTTG.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................G-------TC-GCGTTT---CGCGTGGT---------------------------TGCTGCTGC.............................................................................................................................................2611.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CG-------TC-GCGTTT---CGCGTGGT---------------------------TGCTG.................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................GCTGCT---------------GATCG-------TC-GCGTTT---CGCGTGGT---------------------------T.....................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TC-GCGTTT---CGCGTGGT---------------------------TGCTGCTGCTG----------C................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................GCT---------------GATCG-------TC-GCGTTT---CGCGTCTG---------------------------......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGTTGCTGCT---------------GATCG-------TC-GCGTTT---CG.......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................TTT---CGCGTGGT---------------------------TGCTGCTGCTG----------CCGC.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TACTTTAGGATTGTTGTTGTTGTT......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................TTAGGATTGTTGTTGTTGTTGCTG..................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........TCTATTTACTTTAGGATTGTTGT.............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................TGTTGTTGTTGTTGCTGCT---------------.................................................................................................................................................................................................................19200.601200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000
...........................................................................................................................................................................................................................................G--------TT--GTTG---TTGCTGCTGTTGTT.21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400050000000000000000000000000000000000000000000000000000
........................GATTGTTGTTGTTGTTGCT...................................................................................................................................................................................................................................1950.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.......................................................................................................................................................................................................................................TGCTG--------TT--GTTG---TTGCTGCTGTTG...23200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002130000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................TG----------CCGCTGCTG--------------------C---------------------------------------------CGCT---GCTG...........................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGCTG--------TT--GTTG---TTGCTGCTGT.....21200.2550000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................TGTTGTTGTTGTTGCTGCT---------------GAT..............................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................TGCTGCTGCTG--------TT--GTTG---TTG............20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000
.................................................................................................................................................................................................................................TGCTGCTGCTG--------TT--GTTG---T..............18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000
........................................................................................................................................................................................................................................GCTG--------TT--GTTG---TTGCTGCTGTTG...22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
.....................................................................................................................................................................................................................................GCTGCTG--------TT--GTTG---TTGCTGC........20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..........................................................................................................................................................................................................................................TG--------TT--GTTG---TTGCTGCTGTTG...20200.1530000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGCTGCTG--------TT--GTTG---TTGCTG.........20200.1530000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGCTGCTG--------TT--GTTG---TTGCT..........19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................CTGCTGCTGCTG--------TT--GTTG---T..............19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................TG--------TT--GTTG---TTGCTGCTGT.....18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000
..........................................................................................................................................................................................................................................TG--------TT--GTTG---TTGCTGCTGTT....19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CTG--------TT--GTTG---TTGCTGCTGTTG...21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................TGCTG--------TT--GTTG---TTGCTGCTGTT....22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................G--------TT--GTTG---TTGCTGCTGTT....18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TG--------TT--GTTG---TTGCTGCTGTTGT..21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................T--GTTG---TTGCTGCTGTTGTTG20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGTTGTTGTTGTTGCTGC.................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...........................................................................................GT---------------------------TGCTGCTGCTG----------CCGCTGCT.........................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATTGTTGTTGTTGTTGCTG..................................................................................................................................................................................................................................19170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................GCTGCTGCTG--------TT--GTTG---TTG............19200.0510000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TT--GTTG---TTGCTGCTGTTGTTG21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGCTGCTG--------TT--GTTG---TTGC...........18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTG---TTGCTGCTGTTGTTG18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GCTGCTGCTG--------TT--GTTG---TTGCTGCTGT.....26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGCTG--------TT--GTTG---TTGCTGCT.......19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGCTGCTG--------TT--GTTG---TTGCTGC........21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CTGCTGCTG--------TT--GTTG---TT.............17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TG--------TT--GTTG---TTGCTGCTGTTGTT.22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CTGCTG--------TT--GTTG---TTGCTGCTG......21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGCTG--------TT--GTTG---TTGCTGC........18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GCTGCTGCTG--------TT--GTTG---TTGC...........20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................TGCTGCTGCTG--------TT--GTTG---TTGC...........21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGCTGCTG--------TT--GTTG---TTGCTGCTGTT....25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GCTG--------------------C---------------------------------------------CGCT---GCTGCTGCT......................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CTGCTGCTG--------TT--GTTG---TTGCTG.........21200.0510000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................T---GCTGCTGCTGCTG--------TT--GTT...................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GCTGCTG--------TT--GTTG---TTGCTGCT.......21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................CT---GCTGCTGCTGCTG--------TT--GTTG---...............21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................CTG--------TT--GTTG---TTGCTGCTGTA....20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
TTGCATGTGCTCTATTTACTTTAGGATTGTT---GTGTTGTCTGCT---------------GATCG-------TC-GCGTTT---CGCGTTGT---------------------------TGTTGCTGCCG----------TTGTTGCTG--------------------C---C-------GTTGCTGCT--GCTGC---------------------T---GCTTGTGTTGCTG--------CT--GCTG---TTGTTGCTCGTGTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................GATTGTT---GTGTTGTCTGCT---------------GATCG-------T....................................................................................................................................................................................................2511.00100100000000000000
..........................................TGCT---------------GATCG-------TC-GCGTTT---CGCGTTGT---------------------------TGT...................................................................................................................................................2811.00100000010000000000
..........................................................................C-GCGTTT---CGCGTTGT---------------------------TGTTGCT...............................................................................................................................................2211.00100010000000000000
...................................................................................................................................................................................................TGC---------------------T---GCTTGTGTTGCT...................................1630.33100000000001000000
..................................................................................................................................................................................................................................TGTGTTGCTG--------CT--GCTG---TTT............19170.06100000000001000000
droSec2
CGGCATTTGT--------------------T---GCACCTGCTGCT---------------GCTGG------------A-T------TACCGC---TGC---T------------TG---TTTTGGACATG----------CTG--------------------------CT---GC----CGAC--GCTAGTGTTGCTG---C------------TGCT---GCTGCTGCTGCTA--------CT--GCAG---CTGCTGCTGCTGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTGCAATTGT--------------------T---GCTGCTGTTGCT---------------GCTGC------------TGCA---ATTGTTGC---TGCTGCTGCTGCAAT---------TGTTGCTGCTG----------TTGTTGCTG--------------------C---T-------GCAGTTGTT--GCTGC------T---GG------AACT---GCTGTTGCTGCAG--------CT--GCTG---GAGCTGTTGCTGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CCATGT--GC--------------------T---GTTGCTGCTGCA------G---CG---GATT--------GCTGCCGTT---GCTTCCGT---------TGCTGTGGT---------TGTTGCTGTTGTTTTGGGCAA-----------------C----CAGGTTGCC---GGCAGTTGTC--TGTG--GATG------T------------GGAT---GTTGCTGCTGGTG--------GC--CGCG---CATCGGCTGGTGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 03:03 PM