dps_2

--------------------------------------------------------------------------------------------------------------------------------------------------########### ATATAAAACTAAGACATTTCGCAACATTCTTTTAGGATAAAATTAAAATTTATTGAAGGAATTGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAGACATATCTGACAAATAAATGAATAAACAAATTTTAATCACTCTAAGCG *********************************.............(((((((((((((((((.((((((((......))))))))..)))).))))))))))))).............**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M040 female body	M059 embryo	GSM343916 embryo	V112 male body	GSM444067 head	SRR902012 CNS imaginal disc	SRR902010 ovaries	M062 head	SRR902011 testis	M022 male body
..................................................TATTGAAGGAATTGATATATGC.....................................................................................	22	0	2	3336.00	6672	1457	1421	1836	1064	302	335	102	84	68	3
..................................................TATTGAAGGAATTGATATATGCC....................................................................................	23	0	2	1893.50	3787	691	1978	417	166	169	71	48	198	44	5
..................................................TATTGAAGGAATTGATATATG......................................................................................	21	0	2	1818.00	3636	1182	197	393	1151	300	115	123	14	161	0
....................................................TTGAAGGAATTGATATATGCC....................................................................................	21	0	2	843.00	1686	403	669	272	149	81	35	18	46	12	1
....................................................TTGAAGGAATTGATATATGCCA...................................................................................	22	0	2	359.00	718	266	75	200	94	64	2	6	2	9	0
....................................................TTGAAGGAATTGATATATGC.....................................................................................	20	0	2	286.00	572	185	84	131	72	23	43	15	6	11	2
...................................................ATTGAAGGAATTGATATATGC.....................................................................................	21	0	2	229.00	458	185	97	107	33	14	11	5	5	1	0
..................................................TATTGAAGGAATTGATATATGCCA...................................................................................	24	0	2	163.50	327	131	53	108	23	9	1	1	1	0	0
.................................................TTATTGAAGGAATTGATATATGC.....................................................................................	23	0	2	147.50	295	59	72	119	26	11	4	0	4	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAAA.................................................	25	0	2	117.00	234	189	8	1	0	0	2	21	0	13	0
...................................................................................TGTATTTTTAATTTCTTTCAATA...................................................	23	0	2	113.00	226	123	60	7	0	0	8	18	1	9	0
...................................................ATTGAAGGAATTGATATATGCC....................................................................................	22	0	2	106.50	213	86	84	27	6	1	1	0	7	1	0
..................................................TATTGAAGGAATTGATATAT.......................................................................................	20	0	2	99.00	198	108	4	2	55	19	0	3	1	6	0
....................................................TTGAAGGAATTGATATATG......................................................................................	19	0	2	97.00	194	91	4	19	30	14	15	13	0	8	0
...................................................ATTGAAGGAATTGATATATG......................................................................................	20	0	2	87.00	174	129	5	10	19	6	4	0	1	0	0
..................................................TGTTGAAGGAATTGATATATGCC....................................................................................	23	1	2	84.00	168	0	155	1	1	0	0	0	11	0	0
...................................................................................TGTATTTTTAATTTCTTTCAAT....................................................	22	0	2	82.00	164	94	42	5	0	0	6	13	3	1	0
..................................................TATTGAAGGAATTGATATATGCCAG..................................................................................	25	0	2	73.00	146	103	3	4	4	0	0	25	0	7	0
..................................................TGTTGAAGGAATTGATATATGC.....................................................................................	22	1	2	61.50	123	0	109	2	1	0	0	0	11	0	0
..................................................TATTGAAGGAATTGATATATGCCT...................................................................................	24	1	2	60.50	121	42	7	18	29	10	0	4	5	5	1
..................................................TATTGAAGGAATTGATATATGCA....................................................................................	23	1	2	59.50	119	50	25	28	11	3	0	1	0	1	0
..................................................TATTGAAGGAATTGATATATGT.....................................................................................	22	1	2	56.00	112	21	4	18	55	11	0	2	1	0	0
.....................................................TGAAGGAATTGATATATGCCA...................................................................................	21	0	2	53.50	107	65	5	23	10	3	0	0	0	1	0
...................................................................................TGTATTTTTAATTTCTTTCAATAA..................................................	24	0	2	49.00	98	53	8	0	0	0	1	32	0	4	0
....AAAACTAAGACATTTCGCAAC....................................................................................................................................	21	0	2	45.00	90	19	61	10	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCAA...................................................................................	24	1	2	44.50	89	78	5	3	2	0	0	1	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAAAA................................................	26	1	2	43.50	87	78	2	0	0	0	0	7	0	0	0
.................................................TTATTGAAGGAATTGATATATG......................................................................................	22	0	2	42.00	84	22	8	8	24	16	1	3	1	1	0
.................................................TTATTGAAGGAATTGATATATGCC....................................................................................	24	0	2	41.50	83	32	38	3	4	1	0	0	5	0	0
.................................................TTATTGAAGGAATTGATATATGCCAG..................................................................................	26	0	2	41.00	82	67	1	0	1	0	0	13	0	0	0
.....................................................TGAAGGAATTGATATATGC.....................................................................................	19	0	2	36.50	73	30	6	36	0	0	0	0	1	0	0
....................................................TGGAAGGAATTGATATATGCC....................................................................................	21	1	2	36.50	73	0	65	1	0	0	0	0	7	0	0
.....................................................TGAAGGAATTGATATATGCC....................................................................................	20	0	2	33.00	66	47	8	4	5	0	0	0	2	0	0
................................................TTTATTGAAGGAATTGATATATGC.....................................................................................	24	0	2	29.00	58	8	14	33	3	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGAC....................................................................................	23	1	2	27.00	54	0	51	2	1	0	0	0	0	0	0
....................................................................................GTATTTTTAATTTCTTTCAATA...................................................	22	0	2	26.50	53	38	10	0	0	0	0	0	3	2	0
..................................................TATTGAAGGAATTGATATA........................................................................................	19	0	2	26.50	53	34	2	3	5	7	0	0	0	2	0
.....AAACTAAGACATTTCGCAAC....................................................................................................................................	20	0	2	25.50	51	8	31	12	0	0	0	0	0	0	0
......AACTAAGACATTTCGCAAC....................................................................................................................................	19	0	2	25.00	50	11	21	18	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGA.....................................................................................	22	1	2	23.50	47	20	6	4	3	3	0	11	0	0	0
...............................................ATTTATTGAAGGAATTGATATATGC.....................................................................................	25	0	2	23.50	47	7	18	19	0	0	0	3	0	0	0
....................................................................................GTATTTTTAATTTCTTTCAATAAA.................................................	24	0	2	23.50	47	42	2	0	0	0	0	1	1	1	0
....................................................................................GTATTTTTAATTTCTTTCAAT....................................................	21	0	2	21.00	42	30	3	0	1	1	1	0	4	1	1
..................................................TACTGAAGGAATTGATATATGCC....................................................................................	23	1	2	19.50	39	0	32	1	0	0	0	0	6	0	0
.....................................................................................TATTTTTAATTTCTTTCAATAAA.................................................	23	0	2	17.50	35	29	1	0	0	0	0	2	0	3	0
.........TAAGACATTTCGCAACATTCTTTTAGGA........................................................................................................................	28	0	2	17.50	35	29	5	0	0	0	0	1	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAAAAA...............................................	27	1	2	16.00	32	30	0	0	0	0	0	2	0	0	0
....................................................TTGTAGGAATTGATATATGCC....................................................................................	21	1	2	15.50	31	0	28	0	0	0	0	0	3	0	0
....................................................TTCAAGGAATTGATATATGCC....................................................................................	21	1	2	15.00	30	0	29	0	0	0	0	0	1	0	0
.........................................................................................................AAAGACATATCTGACAAATA................................	20	0	2	15.00	30	7	17	5	0	0	1	0	0	0	0
................................................TTTATTGAAGGAATTGATATATGCCAG..................................................................................	27	0	2	14.50	29	23	1	2	0	0	0	1	0	2	0
..............................................AATTTATTGAAGGAATTGATATATGC.....................................................................................	26	0	2	13.50	27	0	12	14	1	0	0	0	0	0	0
..................................................TACTGAAGGAATTGATATATGC.....................................................................................	22	1	2	13.00	26	0	25	1	0	0	0	0	0	0	0
......................................................................................ATTTTTAATTTCTTTCAATA...................................................	20	0	2	13.00	26	16	7	1	0	1	0	1	0	0	0
..................................................TTTTGAAGGAATTGATATATGCC....................................................................................	23	1	2	13.00	26	0	23	0	0	0	0	0	3	0	0
...........................................TAAAATTTATTGAAGGAATTGATA..........................................................................................	24	0	2	13.00	26	4	0	0	0	0	0	18	0	4	0
.................................................TTATTGAAGGAATTGATATATGCCA...................................................................................	25	0	2	12.00	24	1	2	10	6	5	0	0	0	0	0
................................................TTTATTGAAGGAATTGATATATGCC....................................................................................	25	0	2	12.00	24	12	9	0	0	0	0	0	3	0	0
..................................................TATTGAAGGAATTGATATATGCCAGT.................................................................................	26	0	2	12.00	24	15	2	0	4	2	0	0	1	0	0
............................................................................................................GACATATCTGACAAATAAATGAAT.........................	24	0	2	11.50	23	19	1	0	0	0	0	3	0	0	0
...................................................................................TTTATTTTTAATTTCTTTCAATA...................................................	23	1	2	11.50	23	0	21	0	0	0	0	0	2	0	0
......................................................GAAGGAATTGATATATGCC....................................................................................	19	0	2	11.00	22	10	9	2	0	1	0	0	0	0	0
.TATAAAACTAAGACATTTCGCAACAT..................................................................................................................................	26	0	2	11.00	22	11	5	0	0	0	0	4	0	2	0
.....................................................................................TATTTTTAATTTCTTTCAATA...................................................	21	0	2	11.00	22	16	4	1	0	0	0	1	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAAC.................................................	25	1	2	11.00	22	9	4	1	0	0	0	7	1	0	0
..................................................TATGGAAGGAATTGATATATGCC....................................................................................	23	1	2	11.00	22	0	20	1	0	0	0	0	1	0	0
..................................................TATCGAAGGAATTGATATATGCC....................................................................................	23	1	2	11.00	22	0	19	0	1	0	0	0	2	0	0
.........................................................................................................AAAGACATATCTGACAAAT.................................	19	0	2	10.50	21	10	7	4	0	0	0	0	0	0	0
......................................................................................ATTTTTAATTTCTTTCAATAAA.................................................	22	0	2	10.50	21	15	0	0	0	0	0	6	0	0	0
......AACTAAGACATTTCGCAACATT.................................................................................................................................	22	0	2	10.50	21	5	7	9	0	0	0	0	0	0	0
............GACATTTCGCAACATTCTTTTAGG.........................................................................................................................	24	0	2	10.50	21	4	10	7	0	0	0	0	0	0	0
.........TAAGACATTTCGCAACATTCTTT.............................................................................................................................	23	0	2	10.00	20	18	2	0	0	0	0	0	0	0	0
......................................................GAAGGAATTGATATATGC.....................................................................................	18	0	2	10.00	20	2	9	6	0	0	3	0	0	0	0
.....................................................................................TATTTTTAATTTCTTTCAATAA..................................................	22	0	2	10.00	20	5	2	0	0	0	2	7	0	4	0
.........................................................................................................AAAGACATATCTGACAAATAAATGA...........................	25	0	2	9.50	19	6	12	1	0	0	0	0	0	0	0
...................................................ATTGAAGGAATTGATATATGCCA...................................................................................	23	0	2	9.50	19	15	1	3	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCT....................................................................................	23	1	2	9.50	19	5	3	4	2	0	0	3	1	1	0
....................................................TGGAAGGAATTGATATATGC.....................................................................................	20	1	2	9.00	18	0	15	2	0	0	0	0	1	0	0
....................................................................................GTATTTTTAATTTCTTTCAATAA..................................................	23	0	2	9.00	18	14	2	0	0	0	2	0	0	0	0
..................................................TGTTGAAGGAATTGATATATG......................................................................................	21	1	2	9.00	18	0	15	0	1	0	1	0	1	0	0
....................................................TTGAAGGAATTGATATATGCCT...................................................................................	22	1	2	9.00	18	6	2	3	5	2	0	0	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAA.....................................................	21	0	2	9.00	18	13	1	1	0	0	1	1	0	1	0
.....................................................TGAAGGAATTGATATATGCCAG..................................................................................	22	0	2	9.00	18	9	0	2	2	1	0	3	0	1	0
.....AAACTAAGACATTTCGCAACATT.................................................................................................................................	23	0	2	8.50	17	1	12	4	0	0	0	0	0	0	0
....................................................TGGTAGGAATTGATATATGCC....................................................................................	21	2	2	8.50	17	0	15	0	0	0	0	0	2	0	0
..................................................TTTTGAAGGAATTGATATATGC.....................................................................................	22	1	2	8.50	17	0	14	0	1	0	0	0	2	0	0
.......................................................................................................ATAAAGACATATCTGACAAATA................................	22	0	2	8.00	16	4	12	0	0	0	0	0	0	0	0
.................................................CTATTGAAGGAATTGATATATGCC....................................................................................	24	1	2	8.00	16	2	12	0	0	1	0	0	1	0	0
.........................................................................................................AAAGACATATCTGACAAATAAATGAAT.........................	27	0	2	8.00	16	7	8	0	0	0	1	0	0	0	0
.................................................TGATTGAAGGAATTGATATATGC.....................................................................................	23	1	2	8.00	16	1	14	0	0	0	0	0	1	0	0
.................................................TTATTGAAGGAATTGATATA........................................................................................	20	0	2	7.50	15	5	0	1	7	1	0	1	0	0	0
...............ATTTCGCAACATTCTTTTAGG.........................................................................................................................	21	0	2	7.50	15	3	4	7	0	0	1	0	0	0	0
....................................................TTGAAGGAATTGATATATGAC....................................................................................	21	1	2	7.00	14	0	13	1	0	0	0	0	0	0	0
.......................................................................................................ATAAAGACATATCTGACAAATAAATGA...........................	27	0	2	7.00	14	5	3	1	0	0	5	0	0	0	0
..................................................TATTGAAGGACTTGATATATGCC....................................................................................	23	1	2	7.00	14	0	13	0	0	0	0	0	1	0	0
..................................................TATGGAAGGAATTGATATATGC.....................................................................................	22	1	2	7.00	14	0	12	1	0	0	0	0	1	0	0
................................................................................................................TATCTGACAAATAAATGAATAAACA....................	25	0	2	7.00	14	14	0	0	0	0	0	0	0	0	0
..ATAAAACTAAGACATTTCGC.......................................................................................................................................	20	0	2	6.50	13	3	8	2	0	0	0	0	0	0	0
..................................................TATTGAAGGACTTGATATATGC.....................................................................................	22	1	2	6.50	13	0	11	2	0	0	0	0	0	0	0
.........................................................................................................AAAGACATATCTGACAAATAAAT.............................	23	0	2	6.50	13	7	2	3	0	0	0	0	0	0	1
..................................................TATTGGAGGAATTGATATATGC.....................................................................................	22	1	2	6.50	13	0	6	3	2	1	0	0	1	0	0
............................................................ATTGATATATGCCAGTAAAATG...........................................................................	22	0	2	6.50	13	3	5	4	0	0	1	0	0	0	0
....................................................TTGAAGGAATTGATATATGCA....................................................................................	21	1	2	6.00	12	5	5	0	2	0	0	0	0	0	0
..ATAAAACTAAGACATTTCGCAAC....................................................................................................................................	23	0	2	6.00	12	0	11	0	0	0	1	0	0	0	0
..................................................TATTGAAGGAATTGGTATATGC.....................................................................................	22	1	2	6.00	12	1	1	9	0	0	0	0	0	1	0
.....................................................................................TATTTTTAATTTCTTTCAAT....................................................	20	0	2	6.00	12	10	1	0	0	0	0	0	0	1	0
...................................................ATTGAAGGAATTGATATATGCCAG..................................................................................	24	0	2	6.00	12	10	0	0	0	0	0	1	0	1	0
..................................................TATTGAAGGTATTGATATATGC.....................................................................................	22	1	2	6.00	12	0	4	8	0	0	0	0	0	0	0
...................................................ATTGAAGGAATTGATATATGT.....................................................................................	21	1	2	6.00	12	4	2	2	3	1	0	0	0	0	0
..................................................TATTGAGGGAATTGATATATGCC....................................................................................	23	1	2	6.00	12	1	5	2	0	3	0	0	1	0	0
..................................................CATTGAAGGAATTGATATATGC.....................................................................................	22	1	2	6.00	12	1	6	3	1	0	0	0	1	0	0
..................................................TATAGAAGGAATTGATATATGCC....................................................................................	23	1	2	5.50	11	0	10	0	0	0	0	0	1	0	0
....................................................TTGAAGGAATTGATATATGT.....................................................................................	20	1	2	5.50	11	5	1	0	5	0	0	0	0	0	0
......AACTAAGACATTTCGCAACATTCT...............................................................................................................................	24	0	2	5.50	11	1	10	0	0	0	0	0	0	0	0
..................................................CATTGAAGGAATTGATATATGCC....................................................................................	23	1	2	5.50	11	0	9	1	0	0	0	0	1	0	0
..............CATTTCGCAACATTCTTTTAGG.........................................................................................................................	22	0	2	5.50	11	1	5	5	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCCAGTA................................................................................	27	0	2	5.50	11	7	3	1	0	0	0	0	0	0	0
.................................................CTATTGAAGGAATTGATATATGC.....................................................................................	23	1	2	5.50	11	4	5	1	0	0	0	0	1	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATT...................................................	23	1	2	5.50	11	3	8	0	0	0	0	0	0	0	0
.......................................................................................TTTTTAATTTCTTTCAATAAA.................................................	21	0	2	5.50	11	10	0	0	0	0	0	0	1	0	0
....AAAACTAAGACATTTCGCAACA...................................................................................................................................	22	0	2	5.50	11	5	6	0	0	0	0	0	0	0	0
....................................................................................................................................AAACAAATTTTAATCACTCTAAGC.	24	0	2	5.50	11	2	9	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATAC.....................................................................................	22	1	2	5.50	11	0	7	3	1	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCCC...................................................................................	24	1	2	5.50	11	4	3	0	1	2	0	0	1	0	0
...............................................................GATATATGCCAGTAAAATG...........................................................................	19	0	2	5.00	10	10	0	0	0	0	0	0	0	0	0
.................................................TTATTGAAGGAATTGATATATGCCAGT.................................................................................	27	0	2	5.00	10	6	3	0	1	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCCAA..................................................................................	25	1	2	5.00	10	5	0	1	0	0	0	4	0	0	0
..................................................TATTGAAGGAATTGATATATGCAAA..................................................................................	25	2	2	5.00	10	8	2	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATTC.....................................................................................	22	1	2	5.00	10	0	1	6	1	2	0	0	0	0	0
.........................................................................................................AAAGACATATCTGACAAATAAATGAATA........................	28	0	2	5.00	10	3	5	0	0	0	0	0	1	0	1
....................................................TGGAAGGAATTGATATATGCCA...................................................................................	22	1	2	5.00	10	0	7	1	0	1	0	0	1	0	0
..................................................GATTGAAGGAATTGATATATGC.....................................................................................	22	1	2	5.00	10	1	8	0	1	0	0	0	0	0	0
...........................................TAAAATTTATTGAAGGAATTGATATA........................................................................................	26	0	2	5.00	10	0	0	1	0	0	0	6	0	3	0
..................................................TATTGAAGGAAGTGATATATGC.....................................................................................	22	1	2	5.00	10	0	0	10	0	0	0	0	0	0	0
..........................................................................................................AAGACATATCTGACAAATAAATGAAT.........................	26	0	2	5.00	10	4	5	0	0	0	1	0	0	0	0
....................................................................................GGATTTTTAATTTCTTTCAATA...................................................	22	1	2	5.00	10	1	8	0	0	0	0	0	1	0	0
..................................................TATTGAAGGAATTGATATATTCC....................................................................................	23	1	2	5.00	10	0	8	0	2	0	0	0	0	0	0
...............ATTTCGCAACATTCTTTTAGGAT.......................................................................................................................	23	0	2	5.00	10	4	3	3	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATAGATGC.....................................................................................	22	1	2	4.50	9	0	2	6	0	1	0	0	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAAC....................................................	22	1	2	4.50	9	0	9	0	0	0	0	0	0	0	0
..................................................TATTGGAGGAATTGATATATGCC....................................................................................	23	1	2	4.50	9	1	6	1	0	1	0	0	0	0	0
..................................................TACTGAAGGAATTGATATATG......................................................................................	21	1	2	4.50	9	2	5	1	0	1	0	0	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAAT.................................................	25	1	2	4.50	9	3	1	0	0	0	0	3	0	2	0
..................................................TAGTGAAGGAATTGATATATGC.....................................................................................	22	1	2	4.50	9	0	0	7	0	2	0	0	0	0	0
.......ACTAAGACATTTCGCAACATT.................................................................................................................................	21	0	2	4.50	9	3	1	5	0	0	0	0	0	0	0
....AAAACTAAGACATTTCGCAACATTCTT..............................................................................................................................	27	0	2	4.50	9	1	8	0	0	0	0	0	0	0	0
..........................................................................................................AAGACATATCTGACAAATAAATGA...........................	24	0	2	4.50	9	7	2	0	0	0	0	0	0	0	0
....AAAACTAAGACATTTCGCAACATT.................................................................................................................................	24	0	2	4.50	9	1	6	2	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATAGGC.....................................................................................	22	1	2	4.50	9	0	1	6	0	1	1	0	0	0	0
.............................................AAATTTATTGAAGGAATTGATATATGC.....................................................................................	27	0	2	4.00	8	0	5	3	0	0	0	0	0	0	0
..........................................................................................................AAGACATATCTGACAAATAAAT.............................	22	0	2	4.00	8	4	3	1	0	0	0	0	0	0	0
...............................................ATTTATTGAAGGAATTGATATATGCC....................................................................................	26	0	2	4.00	8	1	2	0	3	0	0	0	2	0	0
..................................................TATTGAAGGGATTGATATATGC.....................................................................................	22	1	2	4.00	8	1	1	5	1	0	0	0	0	0	0
..................................................TATCGAAGGAATTGATATATGC.....................................................................................	22	1	2	4.00	8	0	5	2	1	0	0	0	0	0	0
......................................................................................ATTTTTAATTTCTTTCAATAA..................................................	21	0	2	4.00	8	8	0	0	0	0	0	0	0	0	0
...................................................ATTGAAGGAATTGATATATGCAA...................................................................................	23	1	2	4.00	8	8	0	0	0	0	0	0	0	0	0
...................................................AGTGAAGGAATTGATATATGC.....................................................................................	21	1	2	4.00	8	0	8	0	0	0	0	0	0	0	0
...................................................AGTGAAGGAATTGATATATGCC....................................................................................	22	1	2	4.00	8	0	7	0	0	0	0	0	1	0	0
............................................................................................................GACATATCTGACAAATAAATGAATAAA......................	27	0	2	4.00	8	5	1	0	0	0	0	2	0	0	0
.................................................TTATTGAAGGAATTGATATAT.......................................................................................	21	0	2	4.00	8	6	0	0	1	1	0	0	0	0	0
............................................................................................................GACATATCTGACAAATAAATGAATAAAC.....................	28	0	2	4.00	8	7	1	0	0	0	0	0	0	0	0
..................................................TATAGAAGGAATTGATATATGC.....................................................................................	22	1	2	3.50	7	0	6	0	0	0	0	0	1	0	0
........................................................................................TTTTAATTTCTTTCAATAAA.................................................	20	0	2	3.50	7	5	0	0	0	0	0	2	0	0	0
.....................................................TGAAGGAATTGATATATG......................................................................................	18	0	2	3.50	7	6	0	1	0	0	0	0	0	0	0
...................................................ATTGAAGGAATTGATATATGCCT...................................................................................	23	1	2	3.50	7	7	0	0	0	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAGTA................................................................................	25	0	2	3.50	7	0	1	0	2	0	0	2	1	1	0
....................................................TTGAAGGAATTGATATATGA.....................................................................................	20	1	2	3.50	7	1	1	2	0	0	0	3	0	0	0
.................................................TGATTGAAGGAATTGATATATGCC....................................................................................	24	1	2	3.50	7	0	6	0	0	0	0	0	1	0	0
........................................................................CAGTAAAATGGTGTATTTTTAAT..............................................................	23	0	2	3.50	7	1	1	5	0	0	0	0	0	0	0
...................................................ATTGAAGGAATTGATATAT.......................................................................................	19	0	2	3.50	7	4	0	0	3	0	0	0	0	0	0
.....................................................................................TATTTTTAATTTCTTTCAATAAC.................................................	23	1	2	3.50	7	3	4	0	0	0	0	0	0	0	0
...............................................ATTTATTGAAGGAATTGATA..........................................................................................	20	0	2	3.50	7	2	0	1	4	0	0	0	0	0	0
..............CATTTCGCAACATTCTTTTAGGA........................................................................................................................	23	0	2	3.50	7	0	3	4	0	0	0	0	0	0	0
..................................................TATTGAAGGGATTGATATATG......................................................................................	21	1	2	3.50	7	1	0	5	1	0	0	0	0	0	0
.......................................................................................................ATAAAGACATATCTGACAAAT.................................	21	0	2	3.50	7	5	2	0	0	0	0	0	0	0	0
....AAAACTAAGACATTTCGCA......................................................................................................................................	19	0	2	3.50	7	3	1	3	0	0	0	0	0	0	0
.......................................................................................................ATAAAGACATATCTGACAA...................................	19	0	2	3.50	7	7	0	0	0	0	0	0	0	0	0
..........................................................................................................AAGACATATCTGACAAATA................................	19	0	2	3.50	7	3	3	1	0	0	0	0	0	0	0
............................................................ATTGATATATGCCAGTAAAATGGTGTA......................................................................	27	0	2	3.50	7	1	6	0	0	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAGT.................................................................................	24	0	2	3.50	7	3	2	0	2	0	0	0	0	0	0
..................................................TATTGAAGGAATTGCTATATGC.....................................................................................	22	1	2	3.50	7	0	2	4	0	1	0	0	0	0	0
..................................................TATTGAAGGAATTGTTATATGC.....................................................................................	22	1	2	3.50	7	0	0	6	0	0	0	0	0	1	0
....................................................................................GTATTTTTAATTTCTTTCAATAAAA................................................	25	1	2	3.50	7	7	0	0	0	0	0	0	0	0	0
....AAAACTAAGACATTTCGCAA.....................................................................................................................................	20	0	2	3.50	7	3	2	2	0	0	0	0	0	0	0
............................................................................................................GACATATCTGACAAATAAATGA...........................	22	0	2	3.50	7	6	1	0	0	0	0	0	0	0	0
...................................................................................TTTATTTTTAATTTCTTTCAAT....................................................	22	1	3	3.33	10	0	7	0	0	0	0	0	3	0	0
...................................................ATTGAAGGAATTGATATATGCA....................................................................................	22	1	2	3.00	6	4	2	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATCCC....................................................................................	23	1	2	3.00	6	0	2	2	1	0	0	0	1	0	0
..................TCGCAACATTCTTTTAGGATAAAAT..................................................................................................................	25	0	2	3.00	6	3	0	1	0	0	0	0	0	2	0
..........................................................................................................AAGACATATCTGACAAAT.................................	18	0	2	3.00	6	3	0	2	0	0	0	0	0	0	1
.................................................CTATTGAAGGAATTGATATATG......................................................................................	22	1	2	3.00	6	0	1	0	5	0	0	0	0	0	0
.....................................................TGAAGGAATTGATATATGCCAGTA................................................................................	24	0	2	3.00	6	6	0	0	0	0	0	0	0	0	0
.................................................TTATTGAAGGAATTGATATATGCCAGTA................................................................................	28	0	2	3.00	6	5	0	0	1	0	0	0	0	0	0
......................................................................................ATTTTTAATTTCTTTCAATAAAA................................................	23	1	2	3.00	6	6	0	0	0	0	0	0	0	0	0
.....AAACTAAGACATTTCGCAA.....................................................................................................................................	19	0	2	3.00	6	2	2	2	0	0	0	0	0	0	0
..................................................TATTAAAGGAATTGATATATGC.....................................................................................	22	1	2	3.00	6	0	2	3	1	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAA..................................................................................	23	1	2	3.00	6	5	0	0	0	0	0	0	0	1	0
.....................................................................................TATTTTTAATTTCTTTCAATAAAA................................................	24	1	2	3.00	6	6	0	0	0	0	0	0	0	0	0
..................................................TATTGAGGGAATTGATATATGC.....................................................................................	22	1	2	3.00	6	0	0	5	1	0	0	0	0	0	0
............GACATTTCGCAACATTCTTTTAGGAT.......................................................................................................................	26	0	2	3.00	6	3	1	2	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGG.....................................................................................	22	1	2	3.00	6	2	1	3	0	0	0	0	0	0	0
.......................................................................................................ATAAAGACATATCTGACAAATAAAT.............................	25	0	2	3.00	6	2	3	0	0	0	1	0	0	0	0
..................................................TATTGAAGGAATTGATATATGAAA...................................................................................	24	2	2	3.00	6	6	0	0	0	0	0	0	0	0	0
..............................................................TGATATATGCCAGTAAAATG...........................................................................	20	0	2	3.00	6	3	0	2	0	0	1	0	0	0	0
..................................................................................................................................ATAAACAAATTTTAATCACTCTAAGC.	26	0	2	3.00	6	0	6	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCCG...................................................................................	24	1	2	3.00	6	5	0	1	0	0	0	0	0	0	0
...............ATTTCGCAACATTCTTTTAGGATA......................................................................................................................	24	0	2	3.00	6	2	4	0	0	0	0	0	0	0	0
...............................................................................................TTCTTTCAATAAAGACATATCTGAC.....................................	25	0	2	3.00	6	1	4	1	0	0	0	0	0	0	0
.......................................................................................TTTTTAATTTCTTTCAATAA..................................................	20	0	2	3.00	6	4	0	0	0	0	0	1	0	1	0
....AAAACTAAGACATTTCGC.......................................................................................................................................	18	0	2	3.00	6	0	6	0	0	0	0	0	0	0	0
...TAAAACTAAGACATTTCGCAACATTC................................................................................................................................	26	0	2	3.00	6	2	2	0	0	0	0	2	0	0	0
...................................................................................TGCATTTTTAATTTCTTTCAATA...................................................	23	1	3	3.00	9	0	9	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAGTTGATATATGCC....................................................................................	23	1	2	3.00	6	0	1	4	0	0	0	0	1	0	0
..................................................TATTGAACGAATTGATATATGC.....................................................................................	22	1	2	2.50	5	0	1	2	1	1	0	0	0	0	0
.....AAACTAAGACATTTCGCAACA...................................................................................................................................	21	0	2	2.50	5	2	2	1	0	0	0	0	0	0	0
......................................................................................................................................ACAAATTTTAATCACTCTAAGC.	22	0	2	2.50	5	1	3	1	0	0	0	0	0	0	0
.....AAACTAAGACATTTCGCAACATTCT...............................................................................................................................	25	0	2	2.50	5	1	4	0	0	0	0	0	0	0	0
..................................................TATTGAGGGAATTGATATATG......................................................................................	21	1	2	2.50	5	1	0	1	3	0	0	0	0	0	0
....................................................................................GTATTTTTAATTTCTTTCAA.....................................................	20	0	2	2.50	5	5	0	0	0	0	0	0	0	0	0
....................................................................................GTATTTTTAATTTCTTTCAATAAC.................................................	24	1	2	2.50	5	3	2	0	0	0	0	0	0	0	0
..............CATTTCGCAACATTCTTTTAGGAT.......................................................................................................................	24	0	2	2.50	5	3	2	0	0	0	0	0	0	0	0
...................................................CTTGAAGGAATTGATATATGCC....................................................................................	22	1	2	2.50	5	1	2	1	0	0	0	0	1	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAAAAAA..............................................	28	2	2	2.50	5	5	0	0	0	0	0	0	0	0	0
....................................ATAAAATTAAAATTTATTGAAGGA.................................................................................................	24	0	2	2.50	5	0	5	0	0	0	0	0	0	0	0
................TTTCGCAACATTCTTTTAGGATAAAAT..................................................................................................................	27	0	2	2.50	5	5	0	0	0	0	0	0	0	0	0
............GACATTTCGCAACATTCTTTTAGGA........................................................................................................................	25	0	2	2.50	5	0	4	1	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATT......................................................................................	21	1	2	2.50	5	0	0	3	1	1	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAG..................................................................................	23	0	2	2.50	5	4	0	1	0	0	0	0	0	0	0
................................................TTTATTGAAGGAATTGATAT.........................................................................................	20	0	2	2.50	5	4	0	0	1	0	0	0	0	0	0
.........................................................................................................AAAGACATATCTGACAAATAAATG............................	24	0	2	2.50	5	5	0	0	0	0	0	0	0	0	0
..........AAGACATTTCGCAACATTCTTT.............................................................................................................................	22	0	2	2.50	5	3	2	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCCAGTAA...............................................................................	28	0	2	2.50	5	4	0	0	0	1	0	0	0	0	0
..................................................TATTGAAGGGATTGATATATGCC....................................................................................	23	1	2	2.50	5	0	2	2	0	0	0	0	1	0	0
..................................................TATTGAAGGAATTGATATATCC.....................................................................................	22	1	2	2.50	5	0	2	2	0	1	0	0	0	0	0
..................................................TATTGAAGGTATTGATATATGCC....................................................................................	23	1	2	2.50	5	0	3	2	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGCTATATG......................................................................................	21	1	2	2.50	5	0	0	2	1	2	0	0	0	0	0
.......................................................................................................ATAAAGACATATCTGACAAATAAATGAAT.........................	29	0	2	2.50	5	1	4	0	0	0	0	0	0	0	0
.........TAAGACATTTCGCAACATTCTT..............................................................................................................................	22	0	2	2.50	5	4	1	0	0	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAGTAA...............................................................................	26	0	2	2.50	5	4	0	0	1	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCAA...................................................................................	22	1	2	2.50	5	2	0	3	0	0	0	0	0	0	0
.......................................................................................................................................CAAATTTTAATCACTCTAAGC.	21	0	2	2.50	5	0	5	0	0	0	0	0	0	0	0
....................................................................................GTATTTTTAATTTCTTTCAATAAAAA...............................................	26	1	2	2.50	5	3	0	0	0	0	0	2	0	0	0
..................................................TATTGAAGGAATTGCTATATGCC....................................................................................	23	1	2	2.50	5	0	4	0	0	0	0	0	1	0	0
............................................................................................................GACATATCTGACAAATAAATGAATA........................	25	0	2	2.50	5	4	1	0	0	0	0	0	0	0	0
....................................................TTGTAGGAATTGATATATGCCA...................................................................................	22	1	2	2.50	5	0	4	1	0	0	0	0	0	0	0
....AAAACTAAGACATTTCGCAACATTCT...............................................................................................................................	26	0	2	2.50	5	1	4	0	0	0	0	0	0	0	0
.....................................................TGAAGGAATTGATATATGCCAGTAAA..............................................................................	26	0	2	2.50	5	0	3	2	0	0	0	0	0	0	0
............GACATTTCGCAACATTCTTTTAGGATA......................................................................................................................	27	0	2	2.50	5	1	0	4	0	0	0	0	0	0	0
.................................................ATATTGAAGGAATTGATATATGC.....................................................................................	23	1	2	2.50	5	4	1	0	0	0	0	0	0	0	0
................................................TTTATTGAAGGAATTGATATATGCCA...................................................................................	26	0	2	2.50	5	0	0	2	1	1	0	1	0	0	0
.....AAACTAAGACATTTCGCAACATTCTT..............................................................................................................................	26	0	2	2.50	5	2	2	1	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATGTATG......................................................................................	21	1	2	2.50	5	1	1	2	1	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAGTAAAA.............................................................................	28	0	2	2.50	5	4	0	0	0	0	0	0	0	1	0
............................................................ATTGATATATGCCAGTAAAATGGTGTAT.....................................................................	28	0	2	2.50	5	2	3	0	0	0	0	0	0	0	0
................................................................................TGGTGTATTTTTAATTTCTTTCAATAA..................................................	27	0	2	2.50	5	0	0	0	0	0	0	5	0	0	0
......AACTAAGACATTTCGCAACATTCTTTT............................................................................................................................	27	0	2	2.50	5	1	4	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATACGC.....................................................................................	22	1	2	2.50	5	1	1	1	1	1	0	0	0	0	0
......AACTAAGACATTTCGCAACAT..................................................................................................................................	21	0	2	2.50	5	1	1	3	0	0	0	0	0	0	0
.....AAACTAAGACATTTCGCAACATTC................................................................................................................................	24	0	2	2.50	5	1	2	2	0	0	0	0	0	0	0
....................................................TTGTAGGAATTGATATATGC.....................................................................................	20	1	2	2.00	4	0	3	0	0	0	0	0	1	0	0
......................................................GAAGGAATTGATATATGCCA...................................................................................	20	0	2	2.00	4	4	0	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATGTATGC.....................................................................................	22	1	2	2.00	4	0	0	3	1	0	0	0	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAATAC..................................................	24	1	2	2.00	4	1	1	0	0	0	0	2	0	0	0
......................................AAAATTAAAATTTATTGAAGGAATT..............................................................................................	25	0	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.......ACTAAGACATTTCGCAACATTCTTTT............................................................................................................................	26	0	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..............................................AATTTATTGAAGGAATTGATATATGCC....................................................................................	27	0	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATCGATATATG......................................................................................	21	1	2	2.00	4	1	0	0	1	0	0	0	0	2	0
............................................AAAATTTATTGAAGGAATTGATATATGC.....................................................................................	28	0	2	2.00	4	1	3	0	0	0	0	0	0	0	0
......................................................................................................AATAAAGACATATCTGACAA...................................	20	0	2	2.00	4	2	0	1	0	0	1	0	0	0	0
..........AAGACATTTCGCAACATTCTTTTAGGA........................................................................................................................	27	0	2	2.00	4	2	2	0	0	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATGCCAGTAAA..............................................................................	27	0	2	2.00	4	2	0	0	1	0	0	0	1	0	0
..........................................................................................................AAGACATATCTGACAAATAAATG............................	23	0	2	2.00	4	4	0	0	0	0	0	0	0	0	0
....................................................TTGAGGGAATTGATATATGCC....................................................................................	21	1	2	2.00	4	1	0	2	0	1	0	0	0	0	0
..................................................GATTGAAGGAATTGATATATGCC....................................................................................	23	1	2	2.00	4	1	3	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCAAAA.................................................................................	26	3	2	2.00	4	4	0	0	0	0	0	0	0	0	0
..........................................................................................................AAGACATATCTGACAAATAA...............................	20	0	2	2.00	4	3	0	1	0	0	0	0	0	0	0
.........TAAGACATTTCGCAACATTCTTTTAGG.........................................................................................................................	27	0	2	2.00	4	4	0	0	0	0	0	0	0	0	0
..................................................TATTGAAGGTATTGATATATG......................................................................................	21	1	2	2.00	4	0	0	3	0	1	0	0	0	0	0
....................................................................................................TCAATAAAGACATATCTGA......................................	19	0	2	2.00	4	2	1	0	0	0	0	1	0	0	0
..................................................TATTTAAGGAATTGATATATGC.....................................................................................	22	1	2	2.00	4	0	3	0	1	0	0	0	0	0	0
.......ACTAAGACATTTCGCAACATTCT...............................................................................................................................	23	0	2	2.00	4	1	3	0	0	0	0	0	0	0	0
...............ATTTCGCAACATTCTTTTAGGA........................................................................................................................	22	0	2	2.00	4	0	2	2	0	0	0	0	0	0	0
....................................ATAAAATTAAAATTTATTGAAGGAATT..............................................................................................	27	0	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.................................................TTATTGAAGGAATTGATAT.........................................................................................	19	0	2	2.00	4	2	0	1	0	1	0	0	0	0	0
...................................................................................TTTATTTTTAATTTCTTTCAATAA..................................................	24	1	2	2.00	4	0	4	0	0	0	0	0	0	0	0
....AAAACTAAGACATTTCGCAACAT..................................................................................................................................	23	0	2	2.00	4	0	1	3	0	0	0	0	0	0	0
......AACTAAGACATTTCGCAGC....................................................................................................................................	19	1	2	2.00	4	0	2	2	0	0	0	0	0	0	0
....................................................TTGAAGGAATTGATATATTCC....................................................................................	21	1	2	2.00	4	0	0	3	1	0	0	0	0	0	0
...................................................................................TGTATTTTTAATTTCTTTCAAA....................................................	22	1	2	2.00	4	2	0	0	0	0	0	2	0	0	0
....................................................TTCAAGGAATTGATATATGCCA...................................................................................	22	1	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..........................................TTAAAATTTATTGAAGGAATTGATA..........................................................................................	25	0	2	2.00	4	2	1	0	0	0	0	1	0	0	0
..................................................TATTGAAGGCATTGATATATGC.....................................................................................	22	1	2	2.00	4	0	0	4	0	0	0	0	0	0	0
..................................................TATCGAAGGAATTGATATATG......................................................................................	21	1	2	2.00	4	0	1	0	1	2	0	0	0	0	0
...............................................................GATATATGCCAGTAAAATGGTGT.......................................................................	23	0	2	2.00	4	3	0	1	0	0	0	0	0	0	0
..................................................AATTGAAGGAATTGATATATGCC....................................................................................	23	1	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..................................................TATTGAAGGAATTGATATATGCCAAA.................................................................................	26	2	2	2.00	4	2	1	1	0	0	0	0	0	0	0
................................................TTTATTGAAGGAATTGATATATG......................................................................................	23	0	2	2.00	4	1	0	0	2	0	0	1	0	0	0
.......................................................................................................ATAAAGACATATCTGACA....................................	18	0	2	2.00	4	2	1	1	0	0	0	0	0	0	0
..................................................TATGGAAGGAATTGATATATG......................................................................................	21	1	2	2.00	4	0	2	1	0	1	0	0	0	0	0
..................................................TATTGAAGGAATTGATCTATGC.....................................................................................	22	1	2	2.00	4	0	0	3	0	1	0	0	0	0	0
.............................................................TTGATATATGCCAGTAAAATG...........................................................................	21	0	2	2.00	4	3	1	0	0	0	0	0	0	0	0

TATATTTTGATTCTGTAAAGCGTTGTAAGAAAATCCTATTTTAATTTTAAATAACTTCCTTAACTATATACGGTCATTTTACCACATAAAAATTAAAGAAAGTTATTTCTGTATAGACTGTTTATTTACTTATTTGTTTAAAATTAGTGAGATTCGC **********************************.............(((((((((((((((((.((((((((......))))))))..)))).))))))))))))).............*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M040 female body	SRR902011 testis	V112 male body	GSM343916 embryo
................................................................................................AGAAAGTTATTTCTGTATAGACTGTT...................................	26	0	2	3.00	6	6	0	0	0
.................................................................................................GAAAGTTATTTCTGTATAGACTGTT...................................	25	0	2	2.00	4	4	0	0	0
..............................................................................................AAAGAAAGTTATTTCTGTATAGACTGTT...................................	28	0	2	1.50	3	3	0	0	0
.............................................................................................TAAAGAAAGTTATTTCTGTATAGAC.......................................	25	0	2	1.50	3	2	0	1	0
.............................................................................................TAAAGAAAGTTATTTCTGTATAGACTGT....................................	28	0	2	0.50	1	1	0	0	0
....................................................AACTTCCTTGACTATATACGGT...................................................................................	22	1	2	0.50	1	1	0	0	0
........GATTCTGTAAAGCGTTGTAA.................................................................................................................................	20	0	2	0.50	1	1	0	0	0
.............................................................................................TAAAGAAAGTTATTTCTGTATAGACT......................................	26	0	2	0.50	1	1	0	0	0
................................................................................................AGAAAGTTATTTCTGTATAGACTG.....................................	24	0	2	0.50	1	1	0	0	0
...................................................................................ACATAAAAATTAAAGAAAGTTATTT.................................................	25	0	2	0.50	1	0	1	0	0
...............................................................................................AAGAAAGTTATTTCTGTATAGACTGT....................................	26	0	2	0.50	1	1	0	0	0
................................................................................................................ATAGACTGTTTATTTACTTATTTGTT...................	26	0	2	0.50	1	0	1	0	0
....................................................AACTTCCTTAACTATATACGGTCATTT..............................................................................	27	0	2	0.50	1	1	0	0	0
......................................................................................................................TGTTTATTTACTTATTTGTTT..................	21	0	2	0.50	1	1	0	0	0
..................................................................................................AAAGTTATTTCTGTATAGACTGTT...................................	24	0	2	0.50	1	1	0	0	0
...................................................................................................AAGTTATTTCTGTATAGACTGTT...................................	23	0	2	0.50	1	1	0	0	0
.....................................................................................................................................TTGTTTAAAATTAGTGAGATTC..	22	0	2	0.50	1	1	0	0	0
............................................................................................TTAAAGAAAGTTATTTCTGTAT...........................................	22	0	2	0.50	1	1	0	0	0
........GATTCTGTAAAGCGTTGTAAGAAAAT...........................................................................................................................	26	0	2	0.50	1	1	0	0	0
..............................................TTTAATAACTTCCTTAACTATATACGGTC..................................................................................	29	1	2	0.50	1	1	0	0	0
............................................................AAACTATATACGGTCATTTTACCACAT......................................................................	27	1	2	0.50	1	0	1	0	0
...........TCTGTAAAGCGTTGTAAGAAAATCC.........................................................................................................................	25	0	2	0.50	1	1	0	0	0
..................................................................................................................................AATTTGTTTAAAATTAGTGAGATTC..	25	1	2	0.50	1	1	0	0	0
.............................................................................................TAAAGAAAGTTATTTCTGTATAGACTGTT...................................	29	0	2	0.50	1	0	0	1	0
..................................................................................................................................TATTTGTTTAAAATTAGTGAGATTCGC	27	0	2	0.50	1	1	0	0	0
....................................................................................................AGTTATTTCTGTATAGACTGTT...................................	22	0	2	0.50	1	1	0	0	0
.....................................................................................................................................TTGTTTAAAATTAGTGAGATTCG.	23	0	2	0.50	1	1	0	0	0
...................................................................ATACGGTCATTTTACCACAT......................................................................	20	0	2	0.50	1	1	0	0	0
.............................................TTTAAATAACTTCCTTAACTATATACGGT...................................................................................	29	0	2	0.50	1	1	0	0	0
..............................AAATCCTATTCTCATTTTAA...........................................................................................................	20	2	3	0.33	1	0	0	0	1

Species	Coordinate	ID	Alignment
dp5	Unknown_group_377:268-424 +	dps_2	ATATAAA-----------------------ACTAAGACATTTCGCAACATTC--TTTTAGG-ATAAAATTAA--AATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAGACATATCTGACAAATAAATGAAT-------AAACAAATT---T-------TAATCACTCTAAGCG
droPer2	scaffold_208:55826-55982 -		ATCGGTGTTGCATTACATGACGGAGCTAGGAATGTGATACTCCTTGGTTTTA-TGTCTAGCTTTGAT--TGG---TCCTCATGAGTGGCGTGATTCTAAAGAATCGATT----TCTCGAGAGTGGCGTGATTCTAATGTTGCTGAAACAA--TGTGGT------------------------------C----CATTGTTTAT-------------
droWil2	scf2_1100000001189:262-415 +		ATGTTA------------------------ACTAAGACATTTCGCAGCATTC-GT-TTGGGT-TAAG----A---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAATATTATTGACGTA---ATGAAATAAAC--AAACAATTTAATA---------ATCACTCTAAGCG
droVir3	scaffold_597:407-561 +		ATGTAAA-----------------------ACTAAGACATTTCGCAACAC---AATTTAGGTATAAA--CAA---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATTTGTGACGTA---ATGAAATAAACCAATATAAAT----T---------ATCACTCTAAGCG
droMoj3	scaffold_4169:3592-3746 +	dmo_3165	ATGTAAA-----------------------ACTAAGACATTTCGCAACAC---AATTTAGGTATAAA--CAA---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATTTGTGACGTA---ATGAAATAAACCAATATAAAT----T---------ATCACTCTAAGCG
droGri2	scaffold_1179:385-538 +	dgr_475	ATGTAAG-----------------------ACTAAGACATTTCGCAACATT---TTTTAGGTAAAT---CAA---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAATATATTTTTGACAA-----TGAAATAAACAAAAAAAAAT----T-------GTATCACTCTAAGCG
droAna3	scaffold_2263:329-488 +	dan_4035	ATATAAA-----------------------ACTAAGACATTTCGCAACAATT-ATTTTAGGTATAAAAATAA---ATTTATTGAAGGAAT--------------TGATATATGCCAGTTAAATGGTGTATTTTTAATTTCTTTCAATAAAAATATAAATGACGAA---TTGTAT-ATATT-ATATATATT---T-------ATAAAACTCTAAGCG
droBip1	scf7180000392609:4233-4391 +		ATATAAA-----------------------ACTAAGACATTTCGCAACAATT-ATTTTAGGTATAAAAATAA---CTTTATTGAAGGAAT--------------TGATATATGCCAGTTAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATAATTGACGAA---TTGTAT-A--TTTATATATATT---T-------ATAAAACTCTAAGCG
droFic1	scf7180000450074:789-946 +		ATATAAA-----------------------ACTAAGACATTTCGCAGCATTTCGTTTTAGGTATAAAAAAAAAAGATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAATTCATATTTGACAAA---TTGAAA-------TAATAAAT----A-------TAAAAACTCTAAGCG
droEle1	scf7180000491249:1699304-1699340 +		AA-----------------------------------------------------------------AACAT---ATCTGTAGAAAAA--------------------------------------------------------------------------------ATGTAT-------AAACAAAT----T-------TT-------------
droRho1	scf7180000764814:213-368 +		ATATAAA-----------------------ACTAAGACATTTCGCAGCATTC-TTTTTAGGTATAAAAAAAA--CATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATACTTGACAAA---TTGAAA-------AAACAAATA---T-------ATAAAACTCTAAGCG
droBia1	scf7180000299694:363-517 +		ATATAAA-----------------------ACTAAGACATTTCGCAGCATTC-GTTTTAGGTATAAAAATAA---AATTATTGAAGGAAT--------------TGATATATGCCAGTAAGACGGTGTATTTTTAATTTCTTTCAATAAAAACATATTTGACAAA---ATTAAC-------AAACCAGTT---T-------ATAAAACTCTAAGCG
droEug1	scf7180000408345:1110-1138 +		AAACAAA-----------------------CCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAACTTTCAACA
dm3	chrUextra:4356408-4356561 +		ATATGAA-----------------------ACTAAGACATTTCGCAACATTT-ATTTTAGGTATATAAATAC---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATAATTGACATT---ATATAA-------AAATGAAT----T-------ATAAAACTCTAAGCG
droSim2	node_61490:1-124 +	dsi_306	------------------------------------------------------TTTTAGGTATAAAAATAA---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTACTTTCTTTCAATAAAAACAATATTGACATT---ATATAA-------AAATGAAT----T-------ATAAAACTCTAAGCG
droSec2	scaffold_5312:1136-1289 +		ATATGAA-----------------------ACTAAGACATTTCGCAACGTTT-ATTTTAGGTATAAAAATAA---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACAATATTGACATT---ATATAA-------AAATAAAT----T-------ATAAAACTCTAAGCG
droYak3	v2_chrUn_687:4789-4942 +		ATATGAA-----------------------ACTAAGACATTTCGCAGCATTT-ATTTTAGGTATAAAAATAC---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAAAATAATTGACAAT---ATATAG-------AAATAAAT----T-------ATAAAACTCTAAGCG
droEre2	scaffold_944:850-1003 +	der_1518	ATATGAA-----------------------ACTAAGACATTTCGCAGCATTT-ATTTTAGGTATAAAAATAC---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACAAAATTGACATT---ATATAA-------AAATGAAT----T-------ATAAAACTCTAAGCG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

dp5

ATATAAA-----------------------ACTAAGACATTTCGCAACATTC--TTTTAGG-ATAAAATTAA--AATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAGACATATCTGACAAATAAATGAAT-------AAACAAATT---T-------TAATCACTCTAAGCG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	2	3336.00	6672	3	1457	1421	84	1836	302	1064	102	68	335
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	2	1893.50	3787	5	691	1978	198	417	169	166	48	44	71
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	2	1818.00	3636	0	1182	197	14	393	300	1151	123	161	115
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	2	843.00	1686	1	403	669	46	272	81	149	18	12	35
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	2	359.00	718	0	266	75	2	200	64	94	6	9	2
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	2	286.00	572	2	185	84	6	131	23	72	15	11	43
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	2	229.00	458	0	185	97	5	107	14	33	5	1	11
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	2	163.50	327	0	131	53	1	108	9	23	1	0	1
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	2	147.50	295	0	59	72	4	119	11	26	0	0	4
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	2	117.00	234	0	189	8	0	1	0	0	21	13	2
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	2	113.00	226	0	123	60	1	7	0	0	18	9	8
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	2	106.50	213	0	86	84	7	27	1	6	0	1	1
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	2	99.00	198	0	108	4	1	2	19	55	3	6	0
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	2	97.00	194	0	91	4	0	19	14	30	13	8	15
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	2	87.00	174	0	129	5	1	10	6	19	0	0	4
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	2	82.00	164	0	94	42	3	5	0	0	13	1	6
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	2	73.00	146	0	103	3	0	4	0	4	25	7	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	2	60.50	121	1	42	7	5	18	10	29	4	5	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	2	59.50	119	0	50	25	0	28	3	11	1	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	2	56.00	112	0	21	4	1	18	11	55	2	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	2	53.50	107	0	65	5	0	23	3	10	0	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	2	49.00	98	0	53	8	0	0	0	0	32	4	1
....AAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	21	2	45.00	90	0	19	61	0	10	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAA.................................................................	26	2	43.50	87	0	78	2	0	0	0	0	7	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	2	42.00	84	0	22	8	1	8	16	24	3	1	1
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	2	41.50	83	0	32	38	5	3	1	4	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	2	41.00	82	0	67	1	0	0	0	1	13	0	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	2	36.50	73	0	30	6	1	36	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	2	33.00	66	0	47	8	2	4	0	5	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	2	29.00	58	0	8	14	0	33	0	3	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	2	26.50	53	0	38	10	3	0	0	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	2	26.50	53	0	34	2	0	3	7	5	0	2	0
.....AA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	20	2	25.50	51	0	8	31	0	12	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	19	2	25.00	50	0	11	21	0	18	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	2	23.50	47	0	20	6	0	4	3	3	11	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	2	23.50	47	0	7	18	0	19	0	0	3	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	2	23.50	47	0	42	2	1	0	0	0	1	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	2	21.00	42	1	30	3	4	0	1	1	0	1	1
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	2	17.50	35	0	29	1	0	0	0	0	2	3	0
................................TAAGACATTTCGCAACATTC--TTTTAGG-A.........................................................................................................................................................	28	2	17.50	35	0	29	5	0	0	0	0	1	0	0
...................................................................................................................................................AAAGACATATCTGACAAATA.................................................	20	2	15.00	30	0	7	17	0	5	0	0	0	0	1
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	2	14.50	29	0	23	1	0	2	0	0	1	2	0
..........................................................................AATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	2	13.50	27	0	0	12	0	14	0	1	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	2	13.00	26	0	16	7	0	1	1	0	1	0	0
.....................................................................TAA--AATTTATTGAAGGAAT--------------TGATA...........................................................................................................	24	2	13.00	26	0	4	0	0	0	0	0	18	4	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	2	12.00	24	0	1	2	0	10	5	6	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	2	12.00	24	0	12	9	3	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	2	12.00	24	0	15	2	1	0	2	4	0	0	0
......................................................................................................................................................GACATATCTGACAAATAAATGAAT-------...................................	24	2	11.50	23	0	19	1	0	0	0	0	3	0	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	2	11.00	22	0	10	9	0	2	1	0	0	0	0
.TATAAA-----------------------ACTAAGACATTTCGCAACAT......................................................................................................................................................................	26	2	11.00	22	0	11	5	0	0	0	0	4	2	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	2	11.00	22	0	16	4	0	1	0	0	1	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	2	11.00	22	0	9	4	1	1	0	0	7	0	0
...................................................................................................................................................AAAGACATATCTGACAAAT..................................................	19	2	10.50	21	0	10	7	0	4	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAA..................................................................	22	2	10.50	21	0	15	0	0	0	0	0	6	0	0
......A-----------------------ACTAAGACATTTCGCAACATT.....................................................................................................................................................................	22	2	10.50	21	0	5	7	0	9	0	0	0	0	0
...................................GACATTTCGCAACATTC--TTTTAGG-..........................................................................................................................................................	24	2	10.50	21	0	4	10	0	7	0	0	0	0	0
................................TAAGACATTTCGCAACATTC--TTT...............................................................................................................................................................	23	2	10.00	20	0	18	2	0	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	2	10.00	20	0	2	9	0	6	0	0	0	0	3
...............................................................................................................................TATTTTTAATTTCTTTCAATAA...................................................................	22	2	10.00	20	0	5	2	0	0	0	0	7	4	2
...................................................................................................................................................AAAGACATATCTGACAAATAAATGA............................................	25	2	9.50	19	0	6	12	0	1	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	2	9.50	19	0	15	1	0	3	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	2	9.50	19	0	5	3	1	4	0	2	3	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	2	9.00	18	0	14	2	0	0	0	0	0	0	2
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	2	9.00	18	0	6	2	0	3	2	5	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	2	9.00	18	0	13	1	0	1	0	0	1	1	1
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	2	9.00	18	0	9	0	0	2	1	2	3	1	0
.....AA-----------------------ACTAAGACATTTCGCAACATT.....................................................................................................................................................................	23	2	8.50	17	0	1	12	0	4	0	0	0	0	0
.................................................................................................................................................ATAAAGACATATCTGACAAATA.................................................	22	2	8.00	16	0	4	12	0	0	0	0	0	0	0
...................................................................................................................................................AAAGACATATCTGACAAATAAATGAAT-------...................................	27	2	8.00	16	0	7	8	0	0	0	0	0	0	1
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	2	7.50	15	0	5	0	0	1	1	7	1	0	0
......................................ATTTCGCAACATTC--TTTTAGG-..........................................................................................................................................................	21	2	7.50	15	0	3	4	0	7	0	0	0	0	1
.................................................................................................................................................ATAAAGACATATCTGACAAATAAATGA............................................	27	2	7.00	14	0	5	3	0	1	0	0	0	0	5
..........................................................................................................................................................TATCTGACAAATAAATGAAT-------AAACA..............................	25	2	7.00	14	0	14	0	0	0	0	0	0	0	0
..ATAAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	20	2	6.50	13	0	3	8	0	2	0	0	0	0	0
...................................................................................................................................................AAAGACATATCTGACAAATAAAT..............................................	23	2	6.50	13	1	7	2	0	3	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	2	6.50	13	0	3	5	0	4	0	0	0	0	1
................................................................................TTGAAGGAAT--------------TGATATATGCA.....................................................................................................	21	2	6.00	12	0	5	5	0	0	0	2	0	0	0
..ATAAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	23	2	6.00	12	0	0	11	0	0	0	0	0	0	1
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	2	6.00	12	0	10	1	0	0	0	0	0	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	24	2	6.00	12	0	10	0	0	0	0	0	1	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGT......................................................................................................	21	2	6.00	12	0	4	2	0	2	1	3	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGT......................................................................................................	20	2	5.50	11	0	5	1	0	0	0	5	0	0	0
......A-----------------------ACTAAGACATTTCGCAACATTC--T.................................................................................................................................................................	24	2	5.50	11	0	1	10	0	0	0	0	0	0	0
.....................................CATTTCGCAACATTC--TTTTAGG-..........................................................................................................................................................	22	2	5.50	11	0	1	5	0	5	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	27	2	5.50	11	0	7	3	0	1	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	2	5.50	11	0	3	8	0	0	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATAAA..................................................................	21	2	5.50	11	0	10	0	1	0	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	22	2	5.50	11	0	5	6	0	0	0	0	0	0	0
.....................................................................................................................................................................................AAACAAATT---T-------TAATCACTCTAAGC.	24	2	5.50	11	0	2	9	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCC....................................................................................................	24	2	5.50	11	0	4	3	1	0	2	1	0	0	0
.........................................................................................................GATATATGCCAGTAAAATG............................................................................................	19	2	5.00	10	0	10	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	2	5.00	10	0	6	3	0	0	0	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	2	5.00	10	0	5	0	0	1	0	0	4	0	0
...................................................................................................................................................AAAGACATATCTGACAAATAAATGAAT-------A..................................	28	2	5.00	10	1	3	5	1	0	0	0	0	0	0
.....................................................................TAA--AATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	26	2	5.00	10	0	0	0	0	1	0	0	6	3	0
....................................................................................................................................................AAGACATATCTGACAAATAAATGAAT-------...................................	26	2	5.00	10	0	4	5	0	0	0	0	0	0	1
......................................ATTTCGCAACATTC--TTTTAGG-AT........................................................................................................................................................	23	2	5.00	10	0	4	3	0	3	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAAC.....................................................................	22	2	4.50	9	0	0	9	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	2	4.50	9	0	3	1	0	0	0	0	3	2	0
..............................ACTAAGACATTTCGCAACATT.....................................................................................................................................................................	21	2	4.50	9	0	3	1	0	5	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACATTC--TT................................................................................................................................................................	27	2	4.50	9	0	1	8	0	0	0	0	0	0	0
....................................................................................................................................................AAGACATATCTGACAAATAAATGA............................................	24	2	4.50	9	0	7	2	0	0	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACATT.....................................................................................................................................................................	24	2	4.50	9	0	1	6	0	2	0	0	0	0	0
.......................................................................A--AATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	27	2	4.00	8	0	0	5	0	3	0	0	0	0	0
....................................................................................................................................................AAGACATATCTGACAAATAAAT..............................................	22	2	4.00	8	0	4	3	0	1	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	2	4.00	8	0	1	2	2	0	0	3	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAA...................................................................	21	2	4.00	8	0	8	0	0	0	0	0	0	0	0
......................................................................................................................................................GACATATCTGACAAATAAATGAAT-------AAA................................	27	2	4.00	8	0	5	1	0	0	0	0	2	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	2	4.00	8	0	6	0	0	0	1	1	0	0	0
......................................................................................................................................................GACATATCTGACAAATAAATGAAT-------AAAC...............................	28	2	4.00	8	0	7	1	0	0	0	0	0	0	0
..................................................................................................................................TTTTAATTTCTTTCAATAAA..................................................................	20	2	3.50	7	0	5	0	0	0	0	0	2	0	0
.................................................................................TGAAGGAAT--------------TGATATATG.......................................................................................................	18	2	3.50	7	0	6	0	0	1	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	2	3.50	7	0	7	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	25	2	3.50	7	0	0	1	1	0	0	2	2	1	0
................................................................................TTGAAGGAAT--------------TGATATATGA......................................................................................................	20	2	3.50	7	0	1	1	0	2	0	0	3	0	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAAT...............................................................................	23	2	3.50	7	0	1	1	0	5	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATAT........................................................................................................	19	2	3.50	7	0	4	0	0	0	0	3	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAC..................................................................	23	2	3.50	7	0	3	4	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	2	3.50	7	0	2	0	0	1	0	4	0	0	0
.....................................CATTTCGCAACATTC--TTTTAGG-A.........................................................................................................................................................	23	2	3.50	7	0	0	3	0	4	0	0	0	0	0
.................................................................................................................................................ATAAAGACATATCTGACAAAT..................................................	21	2	3.50	7	0	5	2	0	0	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	19	2	3.50	7	0	3	1	0	3	0	0	0	0	0
.................................................................................................................................................ATAAAGACATATCTGACAA....................................................	19	2	3.50	7	0	7	0	0	0	0	0	0	0	0
....................................................................................................................................................AAGACATATCTGACAAATA.................................................	19	2	3.50	7	0	3	3	0	1	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGTA.......................................................................................	27	2	3.50	7	0	1	6	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	24	2	3.50	7	0	3	2	0	0	0	2	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAA.................................................................	25	2	3.50	7	0	7	0	0	0	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAA.........................................................................................................................................................................	20	2	3.50	7	0	3	2	0	2	0	0	0	0	0
......................................................................................................................................................GACATATCTGACAAATAAATGA............................................	22	2	3.50	7	0	6	1	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	2	3.00	6	0	4	2	0	0	0	0	0	0	0
.........................................TCGCAACATTC--TTTTAGG-ATAAAAT...................................................................................................................................................	25	2	3.00	6	0	3	0	0	1	0	0	0	2	0
....................................................................................................................................................AAGACATATCTGACAAAT..................................................	18	2	3.00	6	1	3	0	0	2	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	2	3.00	6	0	6	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	28	2	3.00	6	0	5	0	0	0	0	1	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAAA.................................................................	23	2	3.00	6	0	6	0	0	0	0	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAA.........................................................................................................................................................................	19	2	3.00	6	0	2	2	0	2	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	23	2	3.00	6	0	5	0	0	0	0	0	0	1	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAAA.................................................................	24	2	3.00	6	0	6	0	0	0	0	0	0	0	0
...................................GACATTTCGCAACATTC--TTTTAGG-AT........................................................................................................................................................	26	2	3.00	6	0	3	1	0	2	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGG......................................................................................................	22	2	3.00	6	0	2	1	0	3	0	0	0	0	0
.................................................................................................................................................ATAAAGACATATCTGACAAATAAAT..............................................	25	2	3.00	6	0	2	3	0	0	0	0	0	0	1
........................................................................................................TGATATATGCCAGTAAAATG............................................................................................	20	2	3.00	6	0	3	0	0	2	0	0	0	0	1
............................................................................................................................................................................AT-------AAACAAATT---T-------TAATCACTCTAAGC.	26	2	3.00	6	0	0	6	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCG....................................................................................................	24	2	3.00	6	0	5	0	0	1	0	0	0	0	0
......................................ATTTCGCAACATTC--TTTTAGG-ATA.......................................................................................................................................................	24	2	3.00	6	0	2	4	0	0	0	0	0	0	0
.........................................................................................................................................TTCTTTCAATAAAGACATATCTGAC......................................................	25	2	3.00	6	0	1	4	0	1	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATAA...................................................................	20	2	3.00	6	0	4	0	0	0	0	0	1	1	0
....AAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	18	2	3.00	6	0	0	6	0	0	0	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACATTC--..................................................................................................................................................................	26	2	3.00	6	0	2	2	0	0	0	0	2	0	0
.....AA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	21	2	2.50	5	0	2	2	0	1	0	0	0	0	0
.......................................................................................................................................................................................ACAAATT---T-------TAATCACTCTAAGC.	22	2	2.50	5	0	1	3	0	1	0	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAACATTC--T.................................................................................................................................................................	25	2	2.50	5	0	1	4	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAA......................................................................	20	2	2.50	5	0	5	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAC..................................................................	24	2	2.50	5	0	3	2	0	0	0	0	0	0	0
.....................................CATTTCGCAACATTC--TTTTAGG-AT........................................................................................................................................................	24	2	2.50	5	0	3	2	0	0	0	0	0	0	0
..............................................................ATAAAATTAA--AATTTATTGAAGGA................................................................................................................................	24	2	2.50	5	0	0	5	0	0	0	0	0	0	0
.......................................TTTCGCAACATTC--TTTTAGG-ATAAAAT...................................................................................................................................................	27	2	2.50	5	0	5	0	0	0	0	0	0	0	0
...................................GACATTTCGCAACATTC--TTTTAGG-A.........................................................................................................................................................	25	2	2.50	5	0	0	4	0	1	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	2	2.50	5	0	0	0	0	3	1	1	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	23	2	2.50	5	0	4	0	0	1	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATAT..........................................................................................................	20	2	2.50	5	0	4	0	0	0	0	1	0	0	0
...................................................................................................................................................AAAGACATATCTGACAAATAAATG.............................................	24	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.................................AAGACATTTCGCAACATTC--TTT...............................................................................................................................................................	22	2	2.50	5	0	3	2	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	28	2	2.50	5	0	4	0	0	0	1	0	0	0	0
.................................................................................................................................................ATAAAGACATATCTGACAAATAAATGAAT-------...................................	29	2	2.50	5	0	1	4	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACATTC--TT................................................................................................................................................................	22	2	2.50	5	0	4	1	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	26	2	2.50	5	0	4	0	0	0	0	1	0	0	0
........................................................................................................................................................................................CAAATT---T-------TAATCACTCTAAGC.	21	2	2.50	5	0	0	5	0	0	0	0	0	0	0
......................................................................................................................................................GACATATCTGACAAATAAATGAAT-------A..................................	25	2	2.50	5	0	4	1	0	0	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACATTC--T.................................................................................................................................................................	26	2	2.50	5	0	1	4	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	26	2	2.50	5	0	0	3	0	2	0	0	0	0	0
...................................GACATTTCGCAACATTC--TTTTAGG-ATA.......................................................................................................................................................	27	2	2.50	5	0	1	0	0	4	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	2	2.50	5	0	0	0	0	2	1	1	1	0	0
.....AA-----------------------ACTAAGACATTTCGCAACATTC--TT................................................................................................................................................................	26	2	2.50	5	0	2	2	0	1	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	28	2	2.50	5	0	4	0	0	0	0	0	0	1	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGTAT......................................................................................	28	2	2.50	5	0	2	3	0	0	0	0	0	0	0
..........................................................................................................................TGGTGTATTTTTAATTTCTTTCAATAA...................................................................	27	2	2.50	5	0	0	0	0	0	0	0	5	0	0
......A-----------------------ACTAAGACATTTCGCAACATTC--TTTT..............................................................................................................................................................	27	2	2.50	5	0	1	4	0	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAACAT......................................................................................................................................................................	21	2	2.50	5	0	1	1	0	3	0	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAACATTC--..................................................................................................................................................................	24	2	2.50	5	0	1	2	0	2	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAC...................................................................	24	2	2.00	4	0	1	1	0	0	0	0	2	0	0
................................................................AAAATTAA--AATTTATTGAAGGAAT--------------T...............................................................................................................	25	2	2.00	4	0	0	4	0	0	0	0	0	0	0
..............................ACTAAGACATTTCGCAACATTC--TTTT..............................................................................................................................................................	26	2	2.00	4	0	0	4	0	0	0	0	0	0	0
..........................................................................AATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	27	2	2.00	4	0	0	4	0	0	0	0	0	0	0
......................................................................AA--AATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	28	2	2.00	4	0	1	3	0	0	0	0	0	0	0
................................................................................................................................................AATAAAGACATATCTGACAA....................................................	20	2	2.00	4	0	2	0	0	1	0	0	0	0	1
.................................AAGACATTTCGCAACATTC--TTTTAGG-A.........................................................................................................................................................	27	2	2.00	4	0	2	2	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	27	2	2.00	4	0	2	0	1	0	0	1	0	0	0
....................................................................................................................................................AAGACATATCTGACAAATAAATG.............................................	23	2	2.00	4	0	4	0	0	0	0	0	0	0	0
....................................................................................................................................................AAGACATATCTGACAAATAA................................................	20	2	2.00	4	0	3	0	0	1	0	0	0	0	0
................................TAAGACATTTCGCAACATTC--TTTTAGG-..........................................................................................................................................................	27	2	2.00	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................................TCAATAAAGACATATCTGA.......................................................	19	2	2.00	4	0	2	1	0	0	0	0	1	0	0
..............................ACTAAGACATTTCGCAACATTC--T.................................................................................................................................................................	23	2	2.00	4	0	1	3	0	0	0	0	0	0	0
......................................ATTTCGCAACATTC--TTTTAGG-A.........................................................................................................................................................	22	2	2.00	4	0	0	2	0	2	0	0	0	0	0
..............................................................ATAAAATTAA--AATTTATTGAAGGAAT--------------T...............................................................................................................	27	2	2.00	4	0	0	4	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	2	2.00	4	0	2	0	0	1	1	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACAT......................................................................................................................................................................	23	2	2.00	4	0	0	1	0	3	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAAA.....................................................................	22	2	2.00	4	0	2	0	0	0	0	0	2	0	0
....................................................................TTAA--AATTTATTGAAGGAAT--------------TGATA...........................................................................................................	25	2	2.00	4	0	2	1	0	0	0	0	1	0	0
.........................................................................................................GATATATGCCAGTAAAATGGTGT........................................................................................	23	2	2.00	4	0	3	0	0	1	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	26	2	2.00	4	0	2	1	0	1	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	2	2.00	4	0	1	0	0	0	0	2	1	0	0
.................................................................................................................................................ATAAAGACATATCTGACA.....................................................	18	2	2.00	4	0	2	1	0	1	0	0	0	0	0
.........................................................................................T--------------TGATATATGCCAGTAAAATG............................................................................................	21	2	2.00	4	0	3	1	0	0	0	0	0	0	0

droPer2

ATCGGTGTTGCATTACATGACGGAGCTAGGAATGTGATACTCCTTGGTTTTA-TGTCTAGCTTTGAT--TGG---TCCTCATGAGTGGCGTGATTCTAAAGAATCGATT----TCTCGAGAGTGGCGTGATTCTAATGTTGCTGAAACAA--TGTGGT------------------------------C----CATTGTTTAT-------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.......................................................TCTAGCTTTGAT--TGG---TCCTCA.......................................................................................................................................	21	20	0.65	13	0	13	0	0	0	0
........TGCATTACATGACGGAGCTAGGAATG......................................................................................................................................................................................	26	20	0.50	10	0	0	10	0	0	0
.................................................................................TGAGTGGCGTGATTCTAAAGAATCGATT----.......................................................................................................	28	20	0.45	9	0	9	0	0	0	0
.....TGTTGCATTACATGACGGAGCTAGGAA........................................................................................................................................................................................	27	20	0.25	5	0	5	0	0	0	0
.....................................TACTCCTTGGTTTTA-TGTCTAGCTT.........................................................................................................................................................	25	20	0.20	4	0	4	0	0	0	0
.......................................................TCTAGCTTTGAT--TGG---TCCTCATGAGA..................................................................................................................................	26	20	0.20	4	0	0	4	0	0	0
...........................................................................................................TT----TCTCGAGAGTGGCGTGATT....................................................................................	21	20	0.10	2	0	2	0	0	0	0
...................................................................................................................TCGAGAGTGGCGTGATTCT..................................................................................	19	20	0.10	2	0	0	1	0	1	0
...................................................................................................................TCGAGAGTGGCGTGATTCTAATA..............................................................................	23	20	0.10	2	0	2	0	0	0	0
..........................................................................................................................TGGCGTGATTCTAATGTTGCTGAAACA...................................................................	27	20	0.10	2	0	2	0	0	0	0
...................................................................................................................TCGAGAGTGGCGTGATTC...................................................................................	18	20	0.10	2	0	2	0	0	0	0
.............TACATGACGGAGCTAGGAATGTGATA.................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	1
....GTGTTGCATTACATGACGGA................................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0	0
.......TTGCATTACATGACGGAGCT.............................................................................................................................................................................................	20	20	0.05	1	0	0	1	0	0	0
........................GCTAGGAATGTGATACTCC.............................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1
..................................................................T--TGG---TCCTCATGAGTGGCGTGA...........................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
......................................ACTCCTTGGTTTTA-TGTCTAG............................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
..........................................................AGCTTTGAT--TGG---TCCTCATGAG...................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
.............TACATGACGGAGCTAGGAATGT.....................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	1
..........................................................................................................................TGGCGTGATTCTAATGTTGCTGAA......................................................................	24	20	0.05	1	0	1	0	0	0	0
...................................GATACTCCTTGGTTTTA-TG.................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................GAGAGTGGCGTGATTCTAATG..............................................................................	21	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................GTGGCGTGATTCTAATGTTG...........................................................................	20	20	0.05	1	0	0	0	1	0	0
..................................................................................................................CTCGAGAGTGGCGTGATTCTA.................................................................................	21	20	0.05	1	0	0	0	0	0	1
........................................................................................................................................TGTTGCTGAAACAA--TGTGGT------------------------------C----CATTG..................	26	20	0.05	1	0	1	0	0	0	0
.....TGTTGCATTACATGACGGAGCTA............................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
..................................................................T--TGG---TCCTCATGAGTGGCGT.............................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
...................ACGGAGCTAGGAATGTGATACTCCTTGG.........................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................TTCTAATGTTGCTGAAACAA--TGTGG...........................................................	25	20	0.05	1	0	1	0	0	0	0
.....................................TACTCCTTGGTTTTA-TGTCTAGCTTT........................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0

droWil2

ATGTTA------------------------ACTAAGACATTTCGCAGCATTC-GT-TTGGGT-TAAG----A---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAATATTATTGACGTA---ATGAAATAAAC--AAACAATTTAATA---------ATCACTCTAAGCG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	1028.80	20576	245	1027	1187	18117	0
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	533.80	10676	36	975	1590	6239	1836
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	302.85	6057	0	293	307	5457	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	249.60	4992	113	341	200	3375	963
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	151.55	3031	64	217	153	2597	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	20	61.05	1221	3	27	69	855	267
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	20	53.20	1064	5	79	119	861	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	20	41.35	827	0	39	39	630	119
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	20	25.50	510	0	0	0	510	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	20	23.05	461	0	15	41	283	122
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	20	21.60	432	32	131	0	269	0
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	20	19.20	384	3	0	61	0	320
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	20	14.45	289	0	129	0	153	7
......................................ATTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	20	20	10.65	213	0	0	4	209	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	20	10.05	201	0	110	0	89	2
.....................................CATTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	21	20	10.05	201	0	2	0	198	1
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	20	9.25	185	1	22	39	105	18
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	20	8.90	178	0	0	0	164	14
.................................................TTC-GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	23	20	8.05	161	0	0	54	107	0
....TA------------------------ACTAAGACATTTCGCAGCATTC-GT-................................................................................................................................................................	26	20	6.55	131	0	12	0	119	0
................................................ATTC-GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	24	20	6.30	126	0	0	29	97	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	20	6.25	125	0	4	0	121	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	6.10	122	2	56	0	64	0
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	20	5.85	117	0	77	0	0	40
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	20	5.65	113	27	18	10	44	14
.....................................................GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	20	20	5.65	113	0	0	0	113	0
...................................GACATTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	23	20	4.20	84	0	1	1	82	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	20	4.20	84	19	10	12	0	43
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	20	4.05	81	0	0	0	81	0
......................................ATTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	22	20	3.80	76	0	1	12	63	0
.......................................TTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	19	20	3.60	72	0	0	0	72	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	20	3.55	71	0	4	7	57	3
......................................ATTTCGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	23	20	3.55	71	8	0	6	57	0
.................................................TTC-GT-TTGGGT-TAAG----A---TTTTATTGAA...................................................................................................................................	26	20	3.50	70	0	2	20	48	0
........................................TTCGCAGCATTC-GT-TTGG............................................................................................................................................................	18	20	3.45	69	0	0	0	69	0
.........................................................TGGGT-TAAG----A---TTTTATTGAAGGAAT--------------................................................................................................................	25	20	3.25	65	0	5	0	60	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	20	3.20	64	0	0	8	52	4
...................................GACATTTCGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	26	20	3.20	64	16	2	10	35	1
....TA------------------------ACTAAGACATTTCGCAGCATTC-GT-T...............................................................................................................................................................	27	20	3.20	64	1	63	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	20	3.20	64	2	50	0	12	0
........................................................TTGGGT-TAAG----A---TTTTATTGAA...................................................................................................................................	21	20	3.10	62	0	0	0	62	0
..........................................CGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	19	20	3.10	62	0	0	10	51	1
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	20	3.05	61	0	37	0	0	24
........................................................TTGGGT-TAAG----A---TTTTATTGAAGGA................................................................................................................................	24	20	2.75	55	1	0	14	40	0
...................................GACATTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	25	20	2.70	54	2	0	8	44	0
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	20	2.60	52	0	0	4	48	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	20	2.50	50	8	0	6	28	8
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	20	2.45	49	1	8	15	25	0
........................................................................................................TGATATATGCCAGTAAAATG............................................................................................	20	20	2.30	46	1	0	0	45	0
..GTTA------------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	23	20	2.30	46	0	0	5	41	0
..............................ACTAAGACATTTCGCAGCATTC-GT-................................................................................................................................................................	24	20	2.20	44	1	0	3	40	0
.....................................CATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	20	20	2.10	42	0	0	0	42	0
..............................................GCATTC-GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	26	20	2.05	41	0	0	8	33	0
...TTA------------------------ACTAAGACATTTCGCAGCATTC-GT-................................................................................................................................................................	27	20	2.00	40	0	0	2	38	0
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	20	1.90	38	12	11	6	0	9
...TTA------------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	21	20	1.85	37	1	0	0	36	0
...................................................C-GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	21	20	1.85	37	0	1	0	36	0
..........................................CGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	18	20	1.75	35	1	0	0	34	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	20	1.70	34	2	0	9	0	23
.....................................CATTTCGCAGCATTC-GT-TTGGG...........................................................................................................................................................	22	20	1.70	34	0	0	2	32	0
..GTTA------------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	22	20	1.60	32	0	0	1	31	0
........................................................TTGGGT-TAAG----A---TTTTATTGAAGGAAT--------------................................................................................................................	26	20	1.55	31	0	2	0	25	4
..............................................................................TATTGAAGGAAT--------------TGATATGC........................................................................................................	20	20	1.45	29	0	0	1	0	28
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	20	1.45	29	0	0	1	28	0
...............................CTAAGACATTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	27	20	1.35	27	0	1	1	25	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAA.................................................................	26	20	1.35	27	0	0	0	27	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	20	1.30	26	4	0	0	15	7
.............................................................................TTATTGAAGGAAT--------------TGATA...........................................................................................................	18	20	1.30	26	1	1	0	24	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	20	1.30	26	0	0	0	26	0
......................................ATTTCGCAGCATTC-GT-TTGGG...........................................................................................................................................................	21	20	1.30	26	0	0	0	26	0
....................................ACATTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	22	20	1.30	26	0	0	0	26	0
.............................................................................................................................TGTATTTTTAATTTCTTTCA.......................................................................	20	20	1.30	26	0	20	0	5	1
................................................ATTC-GT-TTGGGT-TAAG----A---TTTTAT.......................................................................................................................................	23	20	1.30	26	0	0	0	26	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAAA................................................................	27	20	1.30	26	0	8	0	18	0
..............................................................................TATTGAAGGAAT--------------TGATAT..........................................................................................................	18	20	1.25	25	0	0	1	21	3
..............................................................................TATTGAAGGAAT--------------TGATATATA.......................................................................................................	21	20	1.20	24	0	1	0	22	1
..................................................................G----A---TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	27	20	1.20	24	0	0	0	24	0
.....................................................GT-TTGGGT-TAAG----A---TTTTAT.......................................................................................................................................	19	20	1.20	24	0	0	0	24	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	25	20	1.20	24	0	0	0	23	1
..................................................................................GAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	27	20	1.20	24	0	1	2	21	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	20	1.15	23	0	22	0	0	1
.........................................................TGGGT-TAAG----A---TTTTATTGAAGGA................................................................................................................................	23	20	1.15	23	0	1	5	17	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	20	1.15	23	0	23	0	0	0
................................................ATTC-GT-TTGGGT-TAAG----A---TT...........................................................................................................................................	19	20	1.15	23	0	0	5	18	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	21	20	1.10	22	6	0	5	11	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	20	1.10	22	0	0	15	0	7
...................................................C-GT-TTGGGT-TAAG----A---TTTTATTGAA...................................................................................................................................	24	20	1.10	22	0	1	7	14	0
...................................GACATTTCGCAGCATTC-GT-................................................................................................................................................................	19	20	1.10	22	0	1	1	20	0
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	20	1.05	21	0	0	3	18	0
.....................................CATTTCGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	24	20	1.05	21	9	0	12	0	0
................................................................AAG----A---TTTTATTGAAGGAAT--------------T...............................................................................................................	20	20	1.05	21	0	1	0	20	0
...............................CTAAGACATTTCGCAGCA.......................................................................................................................................................................	18	20	1.00	20	0	0	0	20	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	20	1.00	20	0	13	7	0	0
..........................................CGCAGCATTC-GT-TTGGGT-TAAG----A---TT...........................................................................................................................................	25	20	1.00	20	0	0	2	17	1
.......................................TTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	21	20	0.95	19	1	0	4	13	1
......................................................T-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	19	20	0.95	19	0	0	0	19	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	20	0.95	19	0	13	0	6	0
.................................................................................TGAAGGAAT--------------TGATATATG.......................................................................................................	18	20	0.90	18	0	4	0	14	0
..............................................................................TATTGAAGGAAT--------------TGATATATC.......................................................................................................	21	20	0.90	18	0	3	0	0	15
............................................................GT-TAAG----A---TTTTATTGAAG..................................................................................................................................	18	20	0.90	18	0	0	0	18	0
...................................GACATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	22	20	0.90	18	0	0	0	18	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	20	0.85	17	0	12	0	5	0
...................................................................................................................................................AAAAATATTATTGACGTA---................................................	18	20	0.85	17	0	0	0	17	0
..........................................CGCAGCATTC-GT-TTGGGT-TAAG----.................................................................................................................................................	22	20	0.85	17	1	0	5	11	0
........................................................TTGGGT-TAAG----A---TTTTATTGAAG..................................................................................................................................	22	20	0.85	17	0	0	0	17	0
................................TAAGACATTTCGCAGCATTC-GT-TTGG............................................................................................................................................................	26	20	0.85	17	0	3	0	14	0
.........................................................................................T--------------TGATATATGCCAGTAAAATG............................................................................................	21	20	0.85	17	0	0	0	17	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	20	0.80	16	1	9	3	0	3
........................................TTCGCAGCATTC-GT-TTGGGT-TAAG----A---T............................................................................................................................................	26	20	0.80	16	0	12	1	3	0
..GTTA------------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	20	20	0.80	16	0	1	0	15	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	20	0.80	16	0	1	0	15	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	20	0.80	16	0	0	2	13	1
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	20	0.80	16	0	12	0	4	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	27	20	0.80	16	0	0	2	14	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	24	20	0.80	16	0	0	0	16	0
..................................................TC-GT-TTGGGT-TAAG----A---TTTTATTGAAGG.................................................................................................................................	27	20	0.75	15	0	10	0	5	0
...................................GACATTTCGCAGCATTC-GT-TTGGG...........................................................................................................................................................	24	20	0.75	15	0	0	2	13	0
...TTA------------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	22	20	0.75	15	0	1	2	12	0
........................................TTCGCAGCATTC-GT-TTGGG...........................................................................................................................................................	19	20	0.75	15	3	1	0	11	0
.....................................CATTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	23	20	0.75	15	0	0	15	0	0
.........................................................................................................GATATATGCCAGTAAAAT.............................................................................................	18	20	0.75	15	0	0	0	15	0
........................................................TTGGGT-TAAG----A---TTTTATTGAAGGAAT--------------T...............................................................................................................	27	20	0.75	15	0	1	14	0	0
.....................................CATTTCGCAGCATTC-GT-TTGGGT-TAAG----.................................................................................................................................................	27	20	0.70	14	4	0	4	6	0
................................................ATTC-GT-TTGGGT-TAAG----A---T............................................................................................................................................	18	20	0.70	14	0	0	0	14	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	26	20	0.70	14	0	0	0	14	0
....TA------------------------ACTAAGACATTTCGCAGCATTC-G..................................................................................................................................................................	25	20	0.70	14	1	5	1	7	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	20	0.70	14	0	0	2	9	3
.................................AAGACATTTCGCAGCATTC-GT-................................................................................................................................................................	21	20	0.70	14	0	0	0	14	0
...............................CTAAGACATTTCGCAGCATTC-...................................................................................................................................................................	21	20	0.70	14	1	0	0	13	0
.....A------------------------ACTAAGACATTTCGCAGCATTC-GT-TT..............................................................................................................................................................	27	20	0.70	14	0	0	2	12	0
..........................................CGCAGCATTC-GT-TTGGGT-TAA......................................................................................................................................................	21	20	0.70	14	0	0	3	11	0
..GTTA------------------------ACTAAGACATTTCGCAGCATTC-GT-................................................................................................................................................................	28	20	0.65	13	0	0	0	13	0
........................................................TTGGGT-TAAG----A---TTTTATTGAAGG.................................................................................................................................	23	20	0.65	13	0	1	2	10	0
.....................................................GT-TTGGGT-TAAG----A---TTTTATTGAAG..................................................................................................................................	24	20	0.65	13	0	0	0	13	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	20	0.65	13	0	0	1	12	0
........................................TTCGCAGCATTC-GT-TTGGGT-TAAG----.................................................................................................................................................	24	20	0.65	13	1	0	0	12	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	20	0.65	13	0	1	8	2	2
..............................ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	21	20	0.65	13	0	0	0	13	0
................................TAAGACATTTCGCAGCATTC-GT-................................................................................................................................................................	22	20	0.65	13	0	0	1	12	0
...............................CTAAGACATTTCGCAGCATTC-GT-T...............................................................................................................................................................	24	20	0.60	12	0	0	4	8	0
..............................ACTAAGACATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	27	20	0.60	12	0	0	0	12	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	20	0.60	12	0	3	3	4	2
.....A------------------------ACTAAGACATTTCGCAGCATTC-...................................................................................................................................................................	23	20	0.60	12	0	0	0	12	0
........................................TTCGCAGCATTC-GT-TTGGGT-TAAG----A---.............................................................................................................................................	25	20	0.60	12	0	8	0	4	0
..............................................GCATTC-GT-TTGGGT-TAAG----A---TTTTAT.......................................................................................................................................	25	20	0.60	12	0	1	4	7	0
..............................................................................TATTGAAGGAAT--------------TGATATATGG......................................................................................................	22	20	0.60	12	0	0	0	7	5
............................................................................TTTATTGAAGGAAT--------------TGATATAT........................................................................................................	22	20	0.55	11	0	1	3	6	1
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	28	20	0.55	11	0	9	0	2	0
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	20	0.55	11	0	0	3	8	0
.....................................CATTTCGCAGCATTC-GT-TT..............................................................................................................................................................	19	20	0.55	11	0	0	0	11	0
................................................ATTC-GT-TTGGGT-TAAG----A---TTTTATTGAA...................................................................................................................................	27	20	0.55	11	0	0	11	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	26	20	0.55	11	0	0	0	11	0
.................................................TTC-GT-TTGGGT-TAAG----A---TTTTATTGAAGG.................................................................................................................................	28	20	0.50	10	0	7	3	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	20	0.50	10	0	5	0	4	1
................................TAAGACATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	25	20	0.50	10	0	1	0	9	0
........................................TTCGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	21	20	0.50	10	5	0	5	0	0
..................................................TC-GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	22	20	0.50	10	0	1	8	0	1
...............................CTAAGACATTTCGCAGCATT.....................................................................................................................................................................	20	20	0.45	9	0	0	0	9	0
.....A------------------------ACTAAGACATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	28	20	0.45	9	1	0	0	8	0
...................................GACATTTCGCAGCATTC-G..................................................................................................................................................................	18	20	0.45	9	2	0	0	7	0
.........................................................TGGGT-TAAG----A---TTTTATTGAAGGAAT--------------T...............................................................................................................	26	20	0.45	9	0	1	8	0	0
.........................................TCGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	20	20	0.45	9	1	0	4	4	0
.......................................TTTCGCAGCATTC-GT-TTGGGT-TAAG----.................................................................................................................................................	25	20	0.45	9	0	0	0	9	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	20	0.45	9	0	0	1	8	0
...........................................................................TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	20	0.45	9	1	1	4	3	0
...........................................GCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	18	20	0.45	9	0	0	0	9	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	20	0.40	8	0	7	0	0	1
..................................................................G----A---TTTTATTGAAGGAAT--------------T...............................................................................................................	18	20	0.40	8	0	0	0	8	0
.....................................................................................................................................................AAATATTATTGACGTA---AT..............................................	18	20	0.40	8	0	0	0	8	0
..............................................................................TATTGAAGGAAT--------------TGATATC.........................................................................................................	19	20	0.40	8	3	2	0	0	3
.............................................AGCATTC-GT-TTGGGT-TAAG----A---TT...........................................................................................................................................	22	20	0.40	8	0	0	3	5	0
...............................CTAAGACATTTCGCAGCATTC-GT-TT..............................................................................................................................................................	25	20	0.40	8	0	0	0	8	0
................................TAAGACATTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	28	20	0.40	8	0	3	2	3	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	27	20	0.40	8	0	0	0	7	1
.................................AAGACATTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	27	20	0.40	8	2	0	1	5	0
............................................................GT-TAAG----A---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	27	20	0.40	8	0	0	3	5	0
..............................ACTAAGACATTTCGCAGCATTC-...................................................................................................................................................................	22	20	0.40	8	0	0	1	7	0
....................................ACATTTCGCAGCATTC-GT-TTGGGT-T........................................................................................................................................................	25	20	0.35	7	4	0	3	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	20	0.35	7	0	0	0	7	0
.....................................CATTTCGCAGCATTC-GT-TTGGGT-TA.......................................................................................................................................................	25	20	0.35	7	7	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	20	0.35	7	0	3	0	4	0
..............................................................................TATTGAAGGAAT--------------TGATATG.........................................................................................................	19	20	0.35	7	0	0	1	6	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	20	0.35	7	1	3	3	0	0
..................................................TC-GT-TTGGGT-TAAG----A---TTTTATTGAAG..................................................................................................................................	26	20	0.35	7	0	4	0	3	0
.................................AAGACATTTCGCAGCATTC-...................................................................................................................................................................	19	20	0.35	7	0	0	0	7	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	24	20	0.35	7	0	0	0	7	0
...........................................GCAGCATTC-GT-TTGGGT-TAAG----.................................................................................................................................................	21	20	0.35	7	0	0	0	7	0
.....A------------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	20	20	0.35	7	0	1	6	0	0
..................................AGACATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	23	20	0.35	7	0	0	0	7	0
.................................................TTC-GT-TTGGGT-TAAG----A---TTTTATTGAAG..................................................................................................................................	27	20	0.35	7	0	6	1	0	0
...............................................CATTC-GT-TTGGGT-TAAG----A---TTTTATT......................................................................................................................................	25	20	0.35	7	0	0	1	6	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	20	0.35	7	0	0	3	0	4
..GTTA------------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	25	20	0.35	7	0	0	1	6	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	20	0.35	7	0	0	0	7	0
.......................................................................................AAT--------------TGATATATGCCAGTAAAATG............................................................................................	23	20	0.35	7	0	1	0	6	0
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	20	0.35	7	0	6	0	1	0
...............................................................TAAG----A---TTTTATTGAAGGA................................................................................................................................	18	20	0.35	7	0	0	0	7	0
.....................................................GT-TTGGGT-TAAG----A---TTTTATTGAAGG.................................................................................................................................	25	20	0.30	6	0	0	0	6	0
................................................ATTC-GT-TTGGGT-TAAG----A---TTTT.........................................................................................................................................	21	20	0.30	6	0	0	2	4	0
..............................................................................TATTGAAGGAAT--------------TGATATT.........................................................................................................	19	20	0.30	6	0	2	1	0	3
....TA------------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	21	20	0.30	6	0	2	4	0	0
......................................................T-TTGGGT-TAAG----A---TTTTATTGAA...................................................................................................................................	22	20	0.30	6	0	0	0	6	0
...................................................................................................................................................AAAAATATTATTGACGTA---ATG.............................................	21	20	0.30	6	0	0	0	6	0
.........................................TCGCAGCATTC-GT-TTGGGT-TAAG----A---.............................................................................................................................................	24	20	0.30	6	0	5	0	1	0
............................................................................................................................................................ATTGACGTA---ATGAAATAAAC--A..................................	21	20	0.30	6	0	1	0	5	0
.................................................................AG----A---TTTTATTGAAGGAAT--------------T...............................................................................................................	19	20	0.30	6	0	0	0	6	0
.........................................................TGGGT-TAAG----A---TTTTATTGAAGG.................................................................................................................................	22	20	0.30	6	0	0	1	5	0
.......................................TTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	18	20	0.30	6	0	0	0	6	0
..........................................CGCAGCATTC-GT-TTGGGT-TAAG----A---TTTT.........................................................................................................................................	27	20	0.30	6	0	0	0	6	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	20	0.30	6	0	0	2	4	0
..............................ACTAAGACATTTCGCAGCATTC-GT-TT..............................................................................................................................................................	26	20	0.30	6	0	1	1	4	0
...............................CTAAGACATTTCGCAGCATTC-G..................................................................................................................................................................	22	20	0.30	6	0	0	1	5	0
..............................................................................TATTGAAGGAAT--------------TGATATGCC.......................................................................................................	21	20	0.30	6	0	0	0	6	0
.............................................AGCATTC-GT-TTGGGT-TAAG----A---TTTTAT.......................................................................................................................................	26	20	0.30	6	0	1	1	4	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	27	20	0.30	6	1	0	5	0	0
.............................................................T-TAAG----A---TTTTATTGAAGGA................................................................................................................................	19	20	0.30	6	0	0	0	6	0
.....A------------------------ACTAAGACATTTCGCAGCATTC-GT-T...............................................................................................................................................................	26	20	0.25	5	0	0	5	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	20	0.25	5	0	0	3	2	0
...............................................................TAAG----A---TTTTATTGAAGGAAT--------------................................................................................................................	20	20	0.25	5	0	0	0	5	0
................................................................................................................................ATTTTTAATTTCTTTCAAT.....................................................................	19	20	0.25	5	0	5	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	20	0.25	5	0	0	0	5	0
..........................................CGCAGCATTC-GT-TTGGGT-TAAG----A---T............................................................................................................................................	24	20	0.25	5	0	0	0	5	0
....................................ACATTTCGCAGCATTC-GT-TTGGGT-.........................................................................................................................................................	24	20	0.25	5	0	0	0	5	0
.................................AAGACATTTCGCAGCATTC-GT-TTG.............................................................................................................................................................	24	20	0.25	5	0	0	0	5	0
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	20	0.25	5	0	0	0	5	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAAA................................................................	26	20	0.25	5	0	4	0	1	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGTA.......................................................................................	27	20	0.25	5	0	0	0	4	1
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	20	0.25	5	0	2	0	0	3
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	28	20	0.25	5	0	0	0	5	0
.........................................................TGGGT-TAAG----A---TTTTATTGAA...................................................................................................................................	20	20	0.25	5	0	0	3	0	2

droVir3

ATGTAAA-----------------------ACTAAGACATTTCGCAACAC---AATTTAGGTATAAA--CAA---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATTTGTGACGTA---ATGAAATAAACCAATATAAAT----T---------ATCACTCTAAGCG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	400.70	8014	0	0	0	110	0	0	0	0	0	0	1121	148	0	868	0	0	0	0	0	151	0	0	0	0	0	656	0	1598	0	0	0	2443	0	0	919	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	203.90	4078	16	0	815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	218	0	0	0	0	0	0	0	0	0	0	0	0	1055	417	0	0	1553	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATTTAGGTA.........................................................................................................................................................	28	20	177.15	3543	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1223	802	0	555	0	0	0	0	508	0	380	0	33	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	107.50	2150	0	0	107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	82	0	0	0	300	0	355	0	0	0	0	106	298	312	0	0	0	0	363	0	169	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	57	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	97.30	1946	0	0	0	0	0	0	0	0	588	0	386	18	46	79	0	0	0	0	0	0	0	0	35	0	0	0	248	334	65	0	0	0	56	0	0	75	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	28	20	83.85	1677	0	0	30	0	0	17	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	810	0	0	0	0	0	0	0	0	0	721	0	0	94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	37.40	748	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	296	0	0	0	0	0	0	0	0	0	158	0	0	0	0	0	0	0	0	0	0	31	0	0	32	0	0	0	0	0	0	0	0	0	0	0	0	224	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	26	20	33.85	677	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	187	0	239	0	49	0	0	198	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATTTAGG...........................................................................................................................................................	26	20	32.70	654	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	417	0	222	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	20	31.15	623	0	0	0	0	0	0	0	6	614	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	20	30.60	612	0	0	0	0	0	0	0	34	0	38	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0	0	0	206	0	0	0	47	0	20	31	0	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	153	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	20	26.25	525	0	0	0	0	0	0	92	4	59	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0	0	23	114	128	0	23	0	0	0	4	0	0	63	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTT..................................................................................	42	20	24.55	491	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	168	201	0	93	0	0	0	0	0	0	0	0	29	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	27	20	22.75	455	0	0	0	0	35	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	173	0	0	238	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAA.................................................................	26	20	22.60	452	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	49	229	0	0	0	0	0	0	0	0	100	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	20	19.80	396	1	0	0	50	0	0	0	0	0	0	0	0	0	128	0	0	0	0	0	0	0	8	0	0	41	0	0	0	0	0	10	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	131	0	24	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	20	17.50	350	0	0	21	5	0	0	97	0	0	0	35	0	0	0	0	0	0	0	0	0	25	5	0	0	0	0	66	0	0	0	0	0	0	0	0	44	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	20	13.05	261	0	0	154	0	0	0	0	0	0	0	0	0	0	1	0	21	2	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................TAAGACATTTCGCAACAC---AATTTAGGT..........................................................................................................................................................	27	20	12.65	253	2	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	91	34	0	54	0	0	0	38	0	0	6	0	3	0	2	1	0	1	0	0	0	2	0	0	0	0	0	0	3	1	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	20	11.40	228	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	170	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	20	10.75	215	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	211	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	20	8.25	165	0	0	0	9	10	18	0	0	9	0	0	0	0	0	1	0	0	0	0	0	23	0	0	9	0	17	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	50	0	9	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATATAAA............................	27	20	8.00	160	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	68	0	77	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATATAAAT----.......................	28	20	7.10	142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	73	0	0	0	0	0	0	44	0	0	0	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	20	5.80	116	0	0	113	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	20	5.55	111	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	39	0	0	0	10	0	0	0	0	0	30	1	2	0	0	0	3	0	0	0	0	2	0	0	1	0	0	0	0	5	0	9	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	27	20	5.35	107	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	52	42	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	20	5.25	105	0	0	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	75	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAAA................................................................	27	20	4.60	92	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	87	0	0	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	20	4.50	90	0	0	0	0	0	0	0	0	0	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0	0	5	9	10	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAAT...............................................................................	45	20	4.50	90	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	57	30	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	20	4.35	87	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	20	4.30	86	0	0	66	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTT....................................................................................	40	20	3.65	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0	0	26	0	0	14	0	15	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	26	20	3.45	69	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	17	0	0	0	0	0	0	0	0	0	0	0	42	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	20	3.15	63	0	0	0	0	2	0	11	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	10	4	0	0	0	6	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	20	3.10	62	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	0	0	34	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	20	3.05	61	0	0	0	8	0	3	0	0	3	0	0	22	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	20	2.75	55	0	0	0	0	0	0	36	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	8	5	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCA.......................................................................	20	20	2.70	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	23	0	15	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCC....................................................................................................	24	20	2.55	51	0	0	0	0	5	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	7	0	31	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................AAGACATTTCGCAACAC---AATTTAGGTA.........................................................................................................................................................	27	20	2.50	50	0	0	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	10	0	0	9	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	20	2.50	50	0	0	0	1	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	2	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	20	2.50	50	0	0	13	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	11	12	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	20	2.50	50	0	0	0	1	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	8	2	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	20	2.40	48	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	21	0	0	0	4	0	3	0	0	6	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTT...................................................................................	41	20	2.35	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	19	4	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	20	2.35	47	0	0	0	0	0	21	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	20	2.20	44	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	6	0	0	0	0	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCC....................................................................................................	22	20	2.15	43	0	0	0	5	0	0	0	0	0	18	0	0	0	0	1	0	0	0	0	0	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATATAA.............................	26	20	2.15	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	28	20	2.00	40	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	12	0	0	0	10	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATTTAG............................................................................................................................................................	25	20	1.90	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	20	1.85	37	0	0	0	0	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	11	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTT.................................................................................	43	20	1.75	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	5	0	0	0	0	26	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACAC---AAT................................................................................................................................................................	27	20	1.70	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	12	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	24	20	1.65	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	6	16	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	20	1.65	33	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	9	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CGCAACAC---AATTTAGGTATAAA--CAA---TT...........................................................................................................................................	27	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	19	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATT...............................................................................................................................................................	22	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	10	0	0	0	0	0	0	0	6	0	0	0	7	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	20	1.40	28	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	8	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	24	20	1.40	28	0	0	0	0	0	0	0	0	0	0	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................TAAGACATTTCGCAACAC---AATTT..............................................................................................................................................................	23	20	1.30	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	12	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................TAAGACATTTCGCAACAC---AAT................................................................................................................................................................	21	20	1.30	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	7	0	0	0	0	0	0	0	0	0	4	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATGC........................................................................................................	20	20	1.20	24	0	0	0	0	0	0	0	14	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	20	1.20	24	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	20	1.10	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	25	20	1.10	22	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	8	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	29	20	1.05	21	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	28	20	1.05	21	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAACAC---AATTTAGGT..........................................................................................................................................................	28	20	1.00	20	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0
......................................ATTTCGCAACAC---AATTTAGGT..........................................................................................................................................................	21	20	0.95	19	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAAT.................................	22	20	0.95	19	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	10	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCG....................................................................................................	24	20	0.95	19	0	0	0	0	2	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	28	20	0.90	18	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	20	0.90	18	0	0	0	0	6	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAT..................................................................	24	20	0.85	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	13	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	20	0.85	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	20	0.85	17	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	20	0.85	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	7	0	0	0	0	0	0	0	0	7	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	23	20	0.80	16	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TAGGTATAAA--CAA---TTTTATTGAAGGAA...............................................................................................................................	27	20	0.80	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	24	20	0.80	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---A..................................................................................................................................................................	19	20	0.80	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	6	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................AAACATTTGTGACGTA---ATGAAATAAACC....................................	28	20	0.75	15	0	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	20	0.70	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	20	0.70	14	0	0	5	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	20	0.65	13	0	0	2	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	20	0.65	13	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	20	0.65	13	0	0	0	0	0	2	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	3	3	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................TAAA--CAA---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	27	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATAT........................................................................................................	18	20	0.65	13	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................AAGACATTTCGCAACAC---AATTTAGG...........................................................................................................................................................	25	20	0.65	13	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATAT..........................................................................................................	18	20	0.60	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATTTAGGTAT........................................................................................................................................................	29	20	0.60	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	5	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	20	0.60	12	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGAA.....................................................................................................	23	20	0.60	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	1	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	20	0.55	11	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAT...................................................................................................	23	20	0.55	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	5	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................AACATTTGTGACGTA---ATGAAATAA.......................................	24	20	0.55	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	2	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATATA..............................	25	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATA.......................................................................................................	21	20	0.50	10	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	27	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCA...................................	20	20	0.50	10	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................AACATTTGTGACGTA---ATGAAATAAACCA...................................	28	20	0.45	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................GCAACAC---AATTTAGGTATAAA--CAA---TT...........................................................................................................................................	26	20	0.45	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	20	0.45	9	0	0	0	0	0	0	3	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	20	0.45	9	0	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AAAACATTTGTGACGTA---AT..............................................	19	20	0.45	9	0	0	7	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAACAC---...................................................................................................................................................................	22	20	0.40	8	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCG....................................................................................................	22	20	0.40	8	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................AAGACATTTCGCAACAC---AATTTAGGT..........................................................................................................................................................	26	20	0.40	8	0	0	2	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAACAC---AATTTAGGTA.........................................................................................................................................................	29	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................GACATTTCGCAACAC---AATTTAGGTA.........................................................................................................................................................	25	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATAA......................................................................................................	22	20	0.40	8	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATC.......................................................................................................	21	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	20	0.40	8	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATC....................................................................	23	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAA.................................................................	25	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................AAACATTTGTGACGTA---ATGAAATA........................................	24	20	0.40	8	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	20	0.35	7	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATAAA.....................................................................................................	23	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	28	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................ATTTCGCAACAC---AATTTAGGTATAAA--C..................................................................................................................................................	27	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATTTA.............................................................................................................................................................	24	20	0.35	7	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	26	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAACAC---A..................................................................................................................................................................	20	20	0.35	7	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	25	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAAACATTTGTGACGTA---AT..............................................	20	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0
.......................................TTTCGCAACAC---AATTTAGGTATAAA--CAA---T............................................................................................................................................	29	20	0.35	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................AACATTTGTGACGTA---ATGAAATA........................................	23	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................CTAAGACATTTCGCAACAC---AATTTA.............................................................................................................................................................	25	20	0.35	7	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	0.35	7	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAACAC---AATTTAG............................................................................................................................................................	28	20	0.35	7	0	0	6	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACAC---AATTT..............................................................................................................................................................	29	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAA...................................................................	22	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAT...................................................................................................	25	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................ACAC---AATTTAGGTATAAA--CAA---TTTTA........................................................................................................................................	26	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	23	20	0.30	6	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCA.....................................................................................................	21	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACAC---AATT...............................................................................................................................................................	28	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................TAAA--CAA---TTTTATTGAAGGAAT--------------TGAT............................................................................................................	26	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................AACATTTGTGACGTA---ATGAA...........................................	20	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	27	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAA................................................................................	44	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AA.................................................................................................................................................................	20	20	0.25	5	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAAT.....................................................................	19	20	0.25	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---AATTTAGGTC.........................................................................................................................................................	28	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTT..................................................................................	43	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	20	0.25	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
..GTAAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	21	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAC...................................................................	24	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................ACTAAGACATTTCGCAACAC---AATT...............................................................................................................................................................	24	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAAGACATTTCGCAACAC---...................................................................................................................................................................	18	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	20	0.25	5	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TTCGCAACAC---AATTTAGGTA.........................................................................................................................................................	20	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATAT...............................	24	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAACAC---AATT...............................................................................................................................................................	25	20	0.25	5	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..GTAAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	23	20	0.25	5	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TGTAAA-----------------------ACTAAGACATTTCGCAACAC---AAT................................................................................................................................................................	29	20	0.25	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................ACATTTGTGACGTA---ATGAAATAAACCAA..................................	28	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TTCGCAACAC---AATTTAGG...........................................................................................................................................................	18	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTT....................................................................................	42	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0
.................................................................AA--CAA---TTTTATTGAAGGAAT--------------T...............................................................................................................	21	20	0.25	5	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGG......................................................................................................	22	20	0.25	5	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................TTTGTGACGTA---ATGAAATAAACC....................................	23	20	0.20	4	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTAGGTATAAA--CAA---TTTTATTGAAGGAA...............................................................................................................................	28	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................AGGTATAAA--CAA---TTTTATTGAAGGAAT--------------................................................................................................................	27	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTAATTTCTTTCAATAA...................................................................	18	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TTTTAATTTCTTTCAATAAA..................................................................	20	20	0.20	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAA..................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TTTCGCAACAC---AATTTAGGT..........................................................................................................................................................	20	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTT...................................................................................	44	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAACC.................................................................	25	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................ATTTGTGACGTA---ATGAAATA........................................	20	20	0.20	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTC........................................................................	15	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
...........................................................................................................................................................................................AT----T---------ATCACTCTAAGC.	15	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0
.....................................................................................................................................................AAACATTTGTGACGTA---ATGAA...........................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGAT............................................................................................................	18	20	0.20	4	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................GTAAAATGGTGTATTTTTAAT...............................................................................	21	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTA.................................................................................	43	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTC........................................................................	19	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATG.........................................................................................................	19	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................ACATTTCGCAACAC---AATTTAGGT..........................................................................................................................................................	23	20	0.20	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACAC---AA.................................................................................................................................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TAGGTATAAA--CAA---TTTTATTGAAGGAAT--------------................................................................................................................	28	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAAA...............................................................................	45	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................ATATGCCAGTAAAATGGTGTAT......................................................................................	22	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
...........................................................................................................................................................................................AT----T---------ATCACTCTAAGCG	16	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................GTGTATTTTTAATTTCTTTCAATA....................................................................	24	20	0.20	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATATAAAT----T---------.............	29	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	20	0.20	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAACAC---AATT...............................................................................................................................................................	23	20	0.20	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCAT....................................................................................................	24	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................ACATTTGTGACGTA---ATGAAATAAACCA...................................	27	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATA....................................................................	19	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	20	0.15	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	21	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..............................................................ATAAA--CAA---TTTTATTGAAGG.................................................................................................................................	20	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TCGCAACAC---AATTTAGGTATAAA--CAA---T............................................................................................................................................	27	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTC..................................................................................	42	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAG..................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAT...................................................................	24	20	0.15	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	20	0.15	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATGTAAA-----------------------ACTAAGACATTTCGCAACAC---AATTTAGGTATAAA--CAA---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATTTGTGACGTA---ATGAAATAAACCAATATAAAT----T---------ATCACTCTAAGCG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	7	739.14	5174	938	1123	74	151	1410	1478
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	7	470.00	3290	378	193	26	54	2339	300
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	7	350.00	2450	515	232	62	101	419	1121
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	7	119.29	835	131	72	16	33	407	176
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	7	89.14	624	164	93	17	54	53	243
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	7	70.43	493	332	4	0	1	156	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAA.................................................................	26	1	59.00	59	55	0	0	0	4	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	7	58.71	411	209	0	1	0	201	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	7	56.86	398	118	121	1	3	108	47
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	7	45.43	318	55	19	2	4	211	27
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	7	43.29	303	132	23	1	9	66	72
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	7	42.00	294	117	30	1	8	39	99
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	7	37.57	263	68	25	4	8	37	121
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	7	31.43	220	124	5	6	16	16	53
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	7	29.14	204	174	2	0	0	28	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	7	23.43	164	72	1	1	0	1	89
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAAA................................................................	27	1	22.00	22	21	0	0	0	1	0
.....AA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	20	6	20.17	121	104	0	1	1	4	11
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	7	20.14	141	83	2	0	2	1	53
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	7	16.86	118	110	0	0	0	8	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	7	15.43	108	13	19	1	6	44	25
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	7	14.86	104	22	35	0	1	41	5
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	7	14.29	100	69	2	0	0	29	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	7	13.86	97	90	0	0	0	7	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	7	12.29	86	21	3	4	7	18	33
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	7	12.14	85	19	4	3	4	5	50
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	7	11.43	80	51	0	0	0	28	1
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	7	9.43	66	32	8	3	6	3	14
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAA.................................................................	25	1	9.00	9	9	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	7	8.86	62	35	3	0	5	5	14
..............................................................................TATTGAAGGAAT--------------TGATATATC.......................................................................................................	21	7	8.57	60	15	0	2	2	1	40
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	7	8.43	59	8	6	2	5	13	25
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	7	7.71	54	16	5	0	3	13	17
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	7	7.00	49	18	0	0	0	31	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAAAA...............................................................	28	1	6.00	6	6	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	7	6.00	42	25	1	1	1	8	6
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	7	5.57	39	22	0	0	1	13	3
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	7	5.57	39	36	0	0	0	1	2
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	28	7	5.57	39	33	0	0	0	4	2
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	7	5.57	39	31	0	0	0	1	7
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	7	5.14	36	31	0	0	0	5	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	7	5.14	36	26	1	1	0	3	5
....AAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	21	6	5.00	30	29	0	0	0	0	1
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	7	4.71	33	22	1	0	0	2	8
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	7	4.57	32	20	0	0	1	11	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	7	4.43	31	25	0	0	0	6	0
...........................................................................TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	7	4.43	31	6	0	0	0	2	23
.............................................................................................................................TGTATTTTTAATTTCTTTCA.......................................................................	20	7	4.29	30	29	1	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	7	4.14	29	20	0	0	1	7	1
................................................................................TTGAAGGAAT--------------TGATATATGCCC....................................................................................................	22	7	3.71	26	3	0	1	5	6	11
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	7	3.71	26	7	3	1	2	4	9
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	7	3.43	24	16	0	0	0	4	4
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	7	3.43	24	6	0	0	0	2	16
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	7	3.43	24	16	0	0	0	4	4
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	7	3.29	23	11	1	1	1	2	7
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	7	3.29	23	5	0	0	0	1	17
......A-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	19	6	3.17	19	19	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	7	3.14	22	7	0	0	0	0	15
...........................................................................TTTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	7	3.00	21	11	0	1	2	0	7
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAAA................................................................	26	1	3.00	3	3	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAAA.................................................................	24	1	3.00	3	3	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCC....................................................................................................	24	7	2.86	20	4	1	0	0	10	5
...........................................................................TTTTATTGAAGGAAT--------------TGATATAT........................................................................................................	23	7	2.71	19	12	1	0	1	0	5
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	7	2.71	19	6	0	2	2	2	7
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	7	2.71	19	7	3	0	2	4	3
.....AA-----------------------ACTAAGACATTTCGCAA.........................................................................................................................................................................	19	6	2.67	16	16	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	7	2.57	18	15	0	1	0	0	2
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	7	2.57	18	14	0	0	0	2	2
.............................................................................................................................TGTATTTTTAATTTCTTTCAAC.....................................................................	22	7	2.57	18	1	0	0	0	17	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	7	2.43	17	6	0	0	0	3	8
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	7	2.43	17	10	0	0	0	0	7
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	7	2.43	17	14	0	0	0	3	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	7	2.43	17	10	0	0	0	7	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	28	7	2.43	17	8	0	0	0	4	5
...........................................................................TTTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	7	2.29	16	7	0	0	0	4	5
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	7	2.14	15	9	0	0	0	0	6
..............................................................................................................................GTATTTTTAATTTCTTTCAA......................................................................	20	7	2.14	15	15	0	0	0	0	0
.........................................................................................................GATATATGCCAGTAAAATG............................................................................................	19	7	2.00	14	14	0	0	0	0	0
..................................................................................................................................TTTTAATTTCTTTCAATAAAA.................................................................	21	1	2.00	2	2	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	7	2.00	14	9	0	1	2	0	2
...............................................................................ATTGAAGGAAT--------------TGATATAT........................................................................................................	19	7	2.00	14	14	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAAAA...............................................................	27	1	2.00	2	2	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAAA.................................................................	23	1	2.00	2	2	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	7	1.86	13	3	0	0	0	0	10
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	7	1.86	13	7	0	0	1	3	2
..............................................................................TATTGAAGGAAT--------------TGATATC.........................................................................................................	19	7	1.86	13	5	0	1	0	0	7
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	7	1.71	12	1	2	0	1	3	5
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	29	7	1.71	12	5	0	0	0	7	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	7	1.71	12	6	0	1	3	1	1
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	7	1.57	11	4	1	0	0	6	0
............................................................................TTTATTGAAGGAAT--------------TGATATAT........................................................................................................	22	7	1.57	11	6	0	0	1	1	3
............................................................................TTTATTGAAGGAAT--------------TGATAT..........................................................................................................	20	7	1.57	11	5	0	1	0	0	5
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	7	1.43	10	10	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAC...................................................................	24	7	1.43	10	6	0	0	0	4	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	27	7	1.43	10	5	0	0	0	0	5
..............................................................................TATTGAAGGAAT--------------TGATATATA.......................................................................................................	21	7	1.29	9	1	2	0	0	3	3
.............................................................................................................................TGTATTTTTAATTTCTTTCAAA.....................................................................	22	7	1.29	9	9	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	7	1.14	8	6	0	0	0	2	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAAT...............................................................................	23	7	1.14	8	8	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAT...................................................................	24	7	1.14	8	7	0	0	0	1	0
...................................................................................AAGGAAT--------------TGATATATGCC.....................................................................................................	18	7	1.14	8	4	0	0	0	4	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAATTTCTT..........................................................................	28	7	1.14	8	7	0	0	0	0	1
................................................................................TTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	23	7	1.14	8	4	0	0	0	0	4
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	7	1.14	8	5	0	1	0	2	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATC....................................................................	23	7	1.14	8	5	0	0	0	3	0
................................................................................TTGAAGGAAT--------------TGATATATGCCCC...................................................................................................	23	7	1.14	8	5	0	0	0	1	2
................................TAAGACATTTCGCAACAC---AATTTAGGTA.........................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	24	7	1.00	7	5	0	1	0	1	0
.....AA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	21	6	1.00	6	6	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATA....................................................................	19	7	1.00	7	2	0	0	0	5	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	7	1.00	7	4	1	1	0	1	0
............................................................................................................................GTGTATTTTTAATTTCTTTCAATAAAAAA...............................................................	29	1	1.00	1	1	0	0	0	0	0
..................................................................................................................CAGTAAAATGGTGTATTTTT..................................................................................	20	7	1.00	7	7	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATAAAA.................................................................	22	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................TGGTGTATTTTTAATTTCTTTCAATAAAA.................................................................	29	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................TTAATTTCTTTCAATAAAA.................................................................	19	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATAAAAAC...............................................................	24	1	1.00	1	0	0	0	0	1	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGTA.......................................................................................	27	7	1.00	7	7	0	0	0	0	0
..............................................................................................................................................................TGACGTA---ATGAAATAAACCAATATA..............................	25	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAA...................................................................	22	7	1.00	7	4	0	0	0	3	0
...................................................................................................................................TTTAATTTCTTTCAATAAAA.................................................................	20	1	1.00	1	1	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGT........................................................................................	26	7	0.86	6	5	0	0	0	1	0
.........................................................................................T--------------TGATATATGCCAGTAAAATG............................................................................................	21	7	0.86	6	4	0	0	0	0	2
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAC..................................................................	24	7	0.86	6	3	0	0	0	3	0
..................................................................................GAAGGAAT--------------TGATATATGCCAGTAAAATG............................................................................................	28	7	0.86	6	5	0	0	0	0	1
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	7	0.86	6	3	1	0	1	0	1
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	7	0.86	6	5	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	26	7	0.86	6	4	1	0	0	0	1
............................................................................................................................GTGTATTTTTAATTTCTTTCAAT.....................................................................	23	7	0.86	6	6	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATT....................................................................	22	7	0.86	6	6	0	0	0	0	0
......................................................................................GAAT--------------TGATATATGCCAGTAAAATG............................................................................................	24	7	0.86	6	5	0	0	0	0	1
..GTAAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	20	6	0.83	5	3	0	0	0	0	2
..GTAAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	23	6	0.83	5	5	0	0	0	0	0
..................................................................................................................CAGTAAAATGGTGTATTTTTA.................................................................................	21	7	0.71	5	5	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	7	0.71	5	2	0	0	0	1	2
................................................................................................................................ATTTTTAATTTCTTTCAATAAA..................................................................	22	7	0.71	5	4	0	0	0	1	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAATTTCT...........................................................................	27	7	0.71	5	4	0	0	0	0	1
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	25	7	0.71	5	2	1	0	0	2	0
....AAA-----------------------ACTAAGACATTTCGCAA.........................................................................................................................................................................	20	6	0.67	4	4	0	0	0	0	0
.....................................................................................GGAAT--------------TGATATATGCCAGTAAAATG............................................................................................	25	7	0.57	4	4	0	0	0	0	0
...................................................................................................................AGTAAAATGGTGTATTTTTAATTTCT...........................................................................	26	7	0.57	4	4	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAT...................................................................................................	23	7	0.57	4	3	0	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	27	7	0.57	4	3	0	0	0	1	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAATTTC............................................................................	26	7	0.57	4	4	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	7	0.57	4	4	0	0	0	0	0
...........................................................................TTTTATTGAAGGAAT--------------TGAT............................................................................................................	19	7	0.57	4	1	0	0	1	0	2
...............................................................................................................................TATTTTTAATTTCTTTCAATAAC..................................................................	23	7	0.57	4	3	0	0	0	1	0
................................................................................TTGAAGGAAT--------------TGATATAT........................................................................................................	18	7	0.57	4	3	0	0	0	0	1
..............................................................................TATTGAAGGAAT--------------TGATATATCT......................................................................................................	22	7	0.57	4	2	1	0	0	0	1
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	28	7	0.57	4	1	0	0	0	0	3
..GTAAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	21	6	0.50	3	2	0	0	0	0	1
................................................................................................................................ATTTTTAATTTCTTTCAAT.....................................................................	19	8	0.50	4	3	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATGC........................................................................................................	20	9	0.44	4	0	1	0	0	1	2
.................................................................................................................................TTTTTAATTTCTTTCAAT.....................................................................	18	9	0.44	4	1	0	0	0	3	0
..................................................................................GAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	27	7	0.43	3	2	0	0	0	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAC...................................................................	23	7	0.43	3	1	0	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	7	0.43	3	3	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAACT.................................................................	26	7	0.43	3	0	0	0	0	3	0
.................................................................................................................................TTTTTAATTTCTTTCAATAA...................................................................	20	7	0.43	3	2	0	0	0	1	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	29	7	0.43	3	3	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAC.....................................................................	21	7	0.43	3	0	0	0	0	3	0
.....................................................................................GGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	24	7	0.43	3	3	0	0	0	0	0
..................................................................................................................................TTTTAATTTCTTTCAATAAA..................................................................	20	7	0.43	3	2	0	0	0	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAT..................................................................	24	7	0.43	3	2	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATAC........................................................................................................	20	7	0.43	3	0	0	0	0	3	0
........................................................................................................TGATATATGCCAGTAAAATGGTGTAT......................................................................................	26	7	0.43	3	3	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATA.........................................................................................................	18	7	0.43	3	1	1	0	0	1	0
........................................................................................................TGATATATGCCAGTAAAATGGTGT........................................................................................	24	7	0.43	3	3	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTC........................................................................	19	7	0.43	3	2	0	0	0	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	26	7	0.43	3	2	0	0	0	0	1
........................................................................................................TGATATATGCCAGTAAAATGGTGTA.......................................................................................	25	7	0.43	3	3	0	0	0	0	0

droGri2

ATGTAAG-----------------------ACTAAGACATTTCGCAACATT---TTTTAGGTAAAT---CAA---TTTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAATATATTTTTGACAA-----TGAAATAAACAAAAAAAAAT----T-------GTATCACTCTAAGCG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	16	54.31	869	246	623
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	16	39.31	629	137	492
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	16	25.81	413	188	225
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	14	7.21	101	100	1
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	16	5.88	94	33	61
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	16	4.81	77	36	41
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	14	4.43	62	62	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	16	3.31	53	19	34
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	16	3.06	49	8	41
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	16	2.94	47	9	38
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	16	2.63	42	32	10
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	16	2.13	34	14	20
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	16	1.94	31	17	14
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	14	1.93	27	27	0
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	16	1.75	28	10	18
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	16	1.75	28	4	24
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	14	1.64	23	23	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	16	1.56	25	5	20
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	16	1.50	24	5	19
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	16	1.50	24	9	15
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	16	1.19	19	2	17
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	16	1.00	16	13	3
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	16	0.94	15	8	7
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	16	0.88	14	7	7
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	16	0.88	14	6	8
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	14	0.86	12	12	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	14	0.86	12	12	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	16	0.81	13	9	4
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	16	0.81	13	5	8
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	16	0.69	11	4	7
.............................................................................................................................TGTATTTTTAATTTCTTTCA.......................................................................	20	14	0.57	8	8	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	16	0.56	9	7	2
...........................................................................TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	16	0.50	8	2	6
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	16	0.50	8	5	3
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	16	0.44	7	6	1
.............................................................................TTATTGAAGGAAT--------------TGATA...........................................................................................................	18	16	0.44	7	7	0
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	16	0.44	7	5	2
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	16	0.38	6	1	5
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	16	0.38	6	2	4
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	16	0.38	6	1	5
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	16	0.38	6	5	1
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	14	0.36	5	5	0
..............................................................................................................................GTATTTTTAATTTCTTTCA.......................................................................	19	14	0.36	5	5	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	16	0.31	5	2	3
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	16	0.31	5	2	3
...........................................................................TTTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	16	0.31	5	1	4
......................................................................................................................................................TATATTTTTGACAA-----TGAAATAAACA....................................	25	16	0.31	5	5	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	16	0.31	5	4	1
..............................................................................................................................GTATTTTTAATTTCTTTCAA......................................................................	20	14	0.29	4	4	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	24	16	0.25	4	2	2
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	16	0.25	4	4	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	16	0.25	4	2	2
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	16	0.25	4	4	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	23	16	0.25	4	2	2
......................................................................AA---TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	27	16	0.25	4	4	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	27	16	0.25	4	4	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	16	0.25	4	3	1
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	16	0.19	3	3	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	16	0.19	3	3	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	27	16	0.19	3	1	2
.........................................................................................T--------------TGATATATGCCAGTAAAATG............................................................................................	21	16	0.19	3	3	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	16	0.19	3	3	0
..............................................................................TATTGAAGGAAT--------------TGATATG.........................................................................................................	19	16	0.19	3	1	2
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	16	0.19	3	2	1
......G-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	20	16	0.19	3	3	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	27	16	0.19	3	0	3
..............................................................................TATTGAAGGAAT--------------TGATAT..........................................................................................................	18	16	0.19	3	3	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	16	0.19	3	1	2
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	16	0.19	3	2	1
..............................................................................TATTGAAGGAAT--------------TGATATATGCG.....................................................................................................	23	16	0.19	3	0	3
......G-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	19	16	0.19	3	3	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	14	0.14	2	2	0
................................................................................................................................ATTTTTAATTTCTTTCAATAA...................................................................	21	14	0.14	2	2	0
........................................................................................................................AATGGTGTATTTTTAATTTCTTTCAAT.....................................................................	27	14	0.14	2	2	0
..................................................................................................................................TTTTAATTTCTTTCAATA....................................................................	18	14	0.14	2	2	0
.........................................................................................................................ATGGTGTATTTTTAATTTCTTTCAAT.....................................................................	26	14	0.14	2	2	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	14	0.14	2	2	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	14	0.14	2	2	0
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	14	0.14	2	2	0
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	14	0.14	2	2	0
......................................................................................................................................................................................AAAAAAT----T-------GTATCACTCTAAG..	21	15	0.13	2	2	0
................................................................................................................................ATTTTTAATTTCTTTCAAT.....................................................................	19	15	0.13	2	2	0
..GTAAG-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	20	15	0.13	2	2	0
.........................................................................................................GATATATGCCAGTAAAATG............................................................................................	19	16	0.13	2	2	0
............................................................................................................................GTGTATTTTTAATTTCTTT.........................................................................	19	16	0.13	2	2	0
......................................................................AA---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	22	16	0.13	2	2	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	28	16	0.13	2	2	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	25	16	0.13	2	1	1
................................................................................TTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	24	16	0.13	2	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	16	0.13	2	0	2
...........................................................................TTTTATTGAAGGAAT--------------TGAT............................................................................................................	19	16	0.13	2	0	2
........................................TTCGCAACATT---TTTTAGGTA.........................................................................................................................................................	20	16	0.13	2	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATA.......................................................................................................	21	16	0.13	2	1	1
.................................................................T---CAA---TTTTATTGAAGGAAT--------------T...............................................................................................................	20	16	0.13	2	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	28	16	0.13	2	0	2
.................................AAGACATTTCGCAACATT---TTTTAGGT..........................................................................................................................................................	26	16	0.13	2	2	0
...............................................................................ATTGAAGGAAT--------------TGATATA.........................................................................................................	18	16	0.13	2	1	1
..............................................................................TATTGAAGGAAT--------------TGATATGC........................................................................................................	20	16	0.13	2	0	2
...............................................................................ATTGAAGGAAT--------------TGATATAT........................................................................................................	19	16	0.13	2	2	0
............................................................................TTTATTGAAGGAAT--------------TGATAT..........................................................................................................	20	16	0.13	2	1	1
..............................................................................TATTGAAGGAAT--------------TGATATT.........................................................................................................	19	16	0.13	2	0	2
.......................................TTTCGCAACATT---TTTTAGGTAAAT---CAA---T............................................................................................................................................	28	16	0.13	2	2	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	28	16	0.13	2	2	0
.......................................................................A---TTTTATTGAAGGAAT--------------TGATATA.........................................................................................................	23	16	0.13	2	0	2
.................................................................................TGAAGGAAT--------------TGATATATGCCAT...................................................................................................	22	16	0.13	2	1	1
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	16	0.13	2	1	1
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	25	16	0.13	2	0	2
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	16	0.13	2	1	1
..............................................................................TATTGAAGGAAT--------------TGATATATGCCC....................................................................................................	24	16	0.13	2	0	2
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	16	0.13	2	0	2
............................................................................TTTATTGAAGGAAT--------------TGATATAT........................................................................................................	22	16	0.13	2	2	0
.................................................................................................................................TTTTTAATTTCTTTCAAT.....................................................................	18	16	0.13	2	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	16	0.13	2	0	2
..................................................................................................................................................................................CAAAAAAAAAT----T-------GTATCACTCT.....	22	12	0.08	1	1	0
.......................................................................................................................................ATTTCTTTCAATAAATATA..............................................................	19	14	0.07	1	1	0
.........................................................................................................................................TTCTTTCAATAAATATATTTTTGACA.....................................................	26	14	0.07	1	1	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	14	0.07	1	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAT...................................................................	24	14	0.07	1	1	0
.........................................................................................................................................TTCTTTCAATAAATATATTTTTGACAA-----T..............................................	28	14	0.07	1	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATG....................................................................	23	14	0.07	1	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAC...................................................................	24	14	0.07	1	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	14	0.07	1	1	0
............................................................................................................................GTGTATTTTTAATTTCTTTCA.......................................................................	21	14	0.07	1	0	1
.........................................................................................................................ATGGTGTATTTTTAATTTCTTTCAATA....................................................................	27	14	0.07	1	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAG..................................................................	25	14	0.07	1	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATACT..................................................................	25	14	0.07	1	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	14	0.07	1	1	0
.................................................................................................................................TTTTTAATTTCTTTCAATA....................................................................	19	14	0.07	1	1	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	14	0.07	1	1	0
.TGTAAG-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	21	15	0.07	1	1	0
...TAAG-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	22	15	0.07	1	1	0
...................................................................................................................................................................................AAAAAAAAAT----T-------GTATCACTCTAAGCG	26	15	0.07	1	1	0
..GTAAG-----------------------ACTAAGACATTTCGCAA.........................................................................................................................................................................	22	15	0.07	1	1	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	26	16	0.06	1	0	1
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	16	0.06	1	0	1
...............................CTAAGACATTTCGCAACATT---TTTTAGG...........................................................................................................................................................	27	16	0.06	1	1	0
..............................................................AAAT---CAA---TTTTATTGAAGGAAT--------------................................................................................................................	22	16	0.06	1	1	0
.........................................................................................................GATATATGCCAGTAAAATGGTGT........................................................................................	23	16	0.06	1	1	0
................................................................................TTGAAGGAAT--------------TGATATATGCCCCC..................................................................................................	24	16	0.06	1	0	1
...............................CTAAGACATTTCGCAACATT---TTTTAGGTA.........................................................................................................................................................	29	16	0.06	1	1	0
.......................................................................A---TTTTATTGAAGGAAT--------------TG..............................................................................................................	18	16	0.06	1	1	0
.....................................................................CAA---TTTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	28	16	0.06	1	1	0
................................TAAGACATTTCGCAACATT---TTTTAGGT..........................................................................................................................................................	27	16	0.06	1	1	0
.................................................................T---CAA---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	24	16	0.06	1	1	0
...............................CTAAGACATTTCGCAACA.......................................................................................................................................................................	18	16	0.06	1	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCG.....................................................................................................	22	16	0.06	1	1	0
.................................................................................TGAAGGAAT--------------TGATATATGCCT....................................................................................................	21	16	0.06	1	1	0
........................................................................................AT--------------TGATATATGCCAGTAAA...............................................................................................	19	16	0.06	1	1	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATAT........................................................................................................	23	16	0.06	1	0	1
.......................................................................A---TTTTATTGAAGGAAT--------------TGATA...........................................................................................................	21	16	0.06	1	1	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGC..................................................................................................	23	16	0.06	1	0	1
......................................................................................GAAT--------------TGATATATGCCAGTAAAATGGTGT........................................................................................	28	16	0.06	1	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTT.................................................................................................	27	16	0.06	1	0	1
........................................TTCGCAACATT---TTTTAGGTAAAT---C..................................................................................................................................................	24	16	0.06	1	1	0
.........................................................................................................GATATATGCCAGTAAAATGGT..........................................................................................	21	16	0.06	1	1	0
...............................CTAAGACATTTCGCAACATT---TTTT..............................................................................................................................................................	24	16	0.06	1	1	0
...........................................................................TTTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	28	16	0.06	1	1	0
.....AG-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	20	16	0.06	1	1	0
...................................GACATTTCGCAACATT---TTTTAGGTA.........................................................................................................................................................	25	16	0.06	1	1	0
...........................................................................................................................................................TTTTGACAA-----TGAAATAAACA....................................	20	16	0.06	1	1	0
.......................................TTTCGCAACATT---TTTTAGGTAAA.......................................................................................................................................................	23	16	0.06	1	1	0
......................................................................AA---TTTTATTGAAGGAAT--------------T...............................................................................................................	18	16	0.06	1	1	0
......................................................................AA---TTTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	28	16	0.06	1	1	0
..........................................................................................................................................................TTTTTGACAA-----TGAAATAAACAAA..................................	23	16	0.06	1	1	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGT......................................................................................................	23	16	0.06	1	1	0
...................................................................................AAGGAAT--------------TGATATATGCCAG...................................................................................................	20	16	0.06	1	1	0
.........................................................................................................................................................ATTTTTGACAA-----TGAAATAAACAAAAAA...............................	27	16	0.06	1	1	0
.............................................................................................................................................................TTGACAA-----TGAAATAAACA....................................	18	16	0.06	1	1	0
...........................................................................................................................................................TTTTGACAA-----TGAAATAAACAAAAA................................	24	16	0.06	1	1	0
............................................................................TTTATTGAAGGAAT--------------TGAT............................................................................................................	18	16	0.06	1	1	0
......................................ATTTCGCAACATT---TTTTAGGT..........................................................................................................................................................	21	16	0.06	1	1	0
.........................................................................................................................ATGGTGTATTTTTAATTTCT...........................................................................	20	16	0.06	1	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCTT....................................................................................................	24	16	0.06	1	0	1
......G-----------------------ACTAAGACATTTCGCAACATT---..................................................................................................................................................................	22	16	0.06	1	1	0
.......................................................................................................................AAATGGTGTATTTTTAATTTCTTT.........................................................................	24	16	0.06	1	1	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	28	16	0.06	1	0	1
.......................................TTTCGCAACATT---TTTTAGGT..........................................................................................................................................................	20	16	0.06	1	1	0
......G-----------------------ACTAAGACATTTCGCAACATT---TTT...............................................................................................................................................................	25	16	0.06	1	1	0
..................................................................................GAAGGAAT--------------TGATATATGCCAGT..................................................................................................	22	16	0.06	1	1	0
..........................................................................................................ATATATGCCAGTAAAATG............................................................................................	18	16	0.06	1	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCG....................................................................................................	24	16	0.06	1	1	0
......G-----------------------ACTAAGACATTTCGCAACAT......................................................................................................................................................................	21	16	0.06	1	1	0
.....AG-----------------------ACTAAGACATTTCGCAA.........................................................................................................................................................................	19	16	0.06	1	1	0
......................................................................AA---TTTTATTGAAGGAAT--------------TGATATAT........................................................................................................	25	16	0.06	1	1	0
....AAG-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	18	16	0.06	1	1	0
...................................................................................AAGGAAT--------------TGATATATGCCA....................................................................................................	19	16	0.06	1	1	0
...................................GACATTTCGCAACATT---TTTT..............................................................................................................................................................	20	16	0.06	1	1	0
.......................................TTTCGCAACATT---TTTTAGGTA.........................................................................................................................................................	21	16	0.06	1	1	0
.............................................................................TTATTGAAGGAAT--------------TGATATATT.......................................................................................................	22	16	0.06	1	1	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	25	16	0.06	1	1	0
.......................................TTTCGCAACATT---TTTTAGGTAAAT---CA.................................................................................................................................................	26	16	0.06	1	1	0
...............................CTAAGACATTTCGCAACATT---TTTTA.............................................................................................................................................................	25	16	0.06	1	1	0
................................................................................TTGAAGGAAT--------------TGATATAT........................................................................................................	18	16	0.06	1	1	0
.........................................................................................T--------------TGATATATGCCAGTAAAATGGTGTA.......................................................................................	26	16	0.06	1	1	0
.............................................................................................................TATGCCAGTAAAATGGTG.........................................................................................	18	16	0.06	1	1	0
....................................................................................................................................................AATATATTTTTGACAA-----TGAAATAAACA....................................	27	16	0.06	1	1	0

droAna3

ATATAAA-----------------------ACTAAGACATTTCGCAACAATT-ATTTTAGGTATAAAAATAA---ATTTATTGAAGGAAT--------------TGATATATGCCAGTTAAATGGTGTATTTTTAATTTCTTTCAATAAAAATATAAATGACGAA---TTGTAT-ATATT-ATATATATT---T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	223.25	4465	0	4289	0	176	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	119.75	2395	226	0	0	166	1295	708
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	57.35	1147	121	415	0	62	224	325
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	51.65	1033	105	566	40	54	116	152
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	35.95	719	0	242	268	0	0	209
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	20	28.40	568	33	238	199	0	98	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	20	21.75	435	15	419	0	0	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	20	20.85	417	17	199	82	10	0	109
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	20	20.25	405	9	267	120	3	3	3
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	20	16.90	338	9	316	12	1	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	20	16.85	337	17	162	86	0	72	0
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	20	15.75	315	0	169	41	43	0	62
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	20	13.40	268	0	42	36	49	0	141
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	20	5.40	108	8	31	13	5	51	0
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	20	5.35	107	9	9	21	7	37	24
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	20	5.25	105	6	50	0	8	34	7
.....AA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	20	20	5.15	103	6	94	0	1	1	1
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	20	4.20	84	14	35	16	1	5	13
......................................ATTTCGCAACAATT-ATTTTAGGT..........................................................................................................................................................	23	20	4.15	83	1	80	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	20	4.05	81	0	65	12	4	0	0
....AAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	21	20	4.05	81	5	72	4	0	0	0
...................................GACATTTCGCAACAATT-ATTTTAGGT..........................................................................................................................................................	26	20	3.85	77	0	71	4	0	0	2
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	20	3.85	77	12	65	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	20	3.50	70	0	69	0	0	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	20	3.30	66	5	61	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	20	3.30	66	16	0	13	2	15	20
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	20	2.85	57	5	14	1	0	17	20
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	20	2.85	57	0	38	6	1	10	2
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	20	2.75	55	0	0	55	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	20	2.70	54	0	0	16	5	0	33
..ATAAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	20	20	2.70	54	0	50	2	0	2	0
.....AA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	21	20	2.60	52	15	26	7	0	2	2
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	20	2.45	49	1	42	1	0	3	2
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	20	2.30	46	0	36	7	1	2	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	20	2.20	44	6	37	0	0	0	1
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	20	2.10	42	0	11	11	4	8	8
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	20	2.10	42	0	36	1	0	5	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAAC.....................................................................	22	20	1.95	39	0	39	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	20	1.95	39	9	0	6	4	0	20
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	20	1.80	36	2	24	10	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	20	1.75	35	0	5	0	9	0	21
..ATAAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	23	20	1.70	34	2	31	1	0	0	0
......................................................................AA---ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	28	20	1.65	33	0	32	1	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	20	1.65	33	3	14	5	0	5	6
......A-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	20	20	1.60	32	6	16	10	0	0	0
....AAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	18	20	1.55	31	0	28	3	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	28	20	1.50	30	5	17	1	0	7	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	20	1.40	28	0	17	0	0	11	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	20	1.35	27	0	10	6	0	6	5
......................................ATTTCGCAACAATT-ATTTTAGGC..........................................................................................................................................................	23	20	1.35	27	0	27	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	20	1.30	26	1	18	7	0	0	0
.......................................................................A---ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	27	20	1.15	23	0	22	1	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	20	1.10	22	0	0	0	2	20	0
ATATAAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	22	20	1.05	21	0	20	0	0	1	0
...................................GACATTTCGCAACAATT-ATTTTAGGC..........................................................................................................................................................	26	20	1.05	21	0	21	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAACAATT-ATT................................................................................................................................................................	27	20	1.00	20	5	15	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAACAATT-...................................................................................................................................................................	24	20	0.95	19	2	17	0	0	0	0
.....................................................................................................................................................AAATATAAATGACGAA---TTGT............................................	20	20	0.90	18	0	10	4	0	4	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	24	20	0.90	18	0	14	4	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	20	0.85	17	1	15	1	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	20	0.85	17	0	0	8	1	8	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	20	0.85	17	0	17	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	20	0.85	17	6	0	1	1	3	6
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTT.................................................................................................	25	20	0.80	16	2	6	0	0	3	5
.....................................CATTTCGCAACAATT-ATTTTAGGT..........................................................................................................................................................	24	20	0.80	16	0	15	1	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	20	0.75	15	3	10	2	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATAT........................................................................................................	19	20	0.75	15	2	6	0	0	7	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTT.................................................................................................	24	20	0.75	15	4	0	0	2	0	9
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	20	0.70	14	1	8	2	0	3	0
..............................................................................TATTGAAGGAAT--------------TGATATATC.......................................................................................................	21	20	0.70	14	0	2	5	0	7	0
................................................................................TTGAAGGAAT--------------TGATATATGCA.....................................................................................................	21	20	0.70	14	3	9	0	0	2	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	20	0.70	14	0	1	0	0	4	9
.......................................TTTCGCAACAATT-ATTTTAGGT..........................................................................................................................................................	22	20	0.70	14	0	14	0	0	0	0
...............................CTAAGACATTTCGCAACAATT-...................................................................................................................................................................	21	20	0.65	13	0	12	1	0	0	0
.....................................................................TAA---ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	29	20	0.65	13	0	13	0	0	0	0
ATATAAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	25	20	0.65	13	1	12	0	0	0	0
...................................GACATTTCGCAACAATT-ATTTTAGGTA.........................................................................................................................................................	27	20	0.60	12	4	8	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATT.........................................................................................................	19	20	0.60	12	0	0	0	1	5	6
..........................................CGCAACAATT-ATTTTAGGT..........................................................................................................................................................	19	20	0.60	12	0	10	1	0	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	20	0.60	12	0	12	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGC..................................................................................................	27	20	0.60	12	0	12	0	0	0	0
...................................................................................................................................................AAAAATATAAATGACGAA---TT..............................................	20	20	0.60	12	0	11	1	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	22	20	0.60	12	6	0	2	0	4	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	20	0.50	10	0	0	0	0	6	4
...........................................................................ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	20	0.50	10	0	0	2	0	8	0
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	20	0.50	10	1	5	4	0	0	0
..ATAAA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	24	20	0.50	10	0	9	1	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	20	0.50	10	1	9	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACAATT-A..................................................................................................................................................................	27	20	0.45	9	8	0	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTT.................................................................................................	28	20	0.45	9	5	0	1	0	0	3
.....AA-----------------------ACTAAGACATTTCGCAACAATT-ATTT...............................................................................................................................................................	28	20	0.45	9	2	6	1	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	20	0.45	9	0	0	1	2	6	0
......A-----------------------ACTAAGACATTTCGCAACAAT.....................................................................................................................................................................	22	20	0.45	9	1	5	3	0	0	0
...................................GACATTTCGCAACAATT-ATTTTAGGTAT........................................................................................................................................................	28	20	0.45	9	0	9	0	0	0	0
.................................................................................................................................................ATAAAAATATAAATGACGAA---TTGT............................................	24	20	0.45	9	0	4	0	0	4	1
................................TAAGACATTTCGCAACAATT-ATTTTAGG...........................................................................................................................................................	28	20	0.45	9	9	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	20	0.45	9	0	3	0	0	1	5
.........................................................................................T--------------TGATATATGCCAGTTAAATGGTGTA.......................................................................................	26	20	0.45	9	0	9	0	0	0	0
..............................ACTAAGACATTTCGCAACA.......................................................................................................................................................................	19	20	0.40	8	0	7	1	0	0	0
...................................................................................................................................................AAAAATATAAATGACGAA---TTGTAT-AT.......................................	26	20	0.40	8	0	8	0	0	0	0
.................................................................................................................................................ATAAAAATATAAATGACGAA---TTGTAT-.........................................	26	20	0.40	8	0	8	0	0	0	0
......................................................................................................................................................AATATAAATGACGAA---TTGT............................................	19	20	0.40	8	1	0	3	0	3	1
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	20	0.40	8	6	2	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACAATT-ATT................................................................................................................................................................	28	20	0.40	8	0	7	0	0	0	1
.....AA-----------------------ACTAAGACATTTCGCAACAAT.....................................................................................................................................................................	23	20	0.35	7	0	6	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	20	0.35	7	2	0	0	2	3	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGC..................................................................................................	28	20	0.35	7	0	7	0	0	0	0
...................................................................................................................................................AAAAATATAAATGACGAA---T...............................................	19	20	0.35	7	0	7	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGC..................................................................................................	26	20	0.35	7	0	7	0	0	0	0
..............................................................ATAAAAATAA---ATTTATTGAAGGA................................................................................................................................	23	20	0.35	7	0	7	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCAACAATT-...................................................................................................................................................................	25	20	0.35	7	0	7	0	0	0	0
..ATAAA-----------------------ACTAAGACATTTCGCAACAATT-...................................................................................................................................................................	27	20	0.35	7	0	6	1	0	0	0
..........................................CGCAACAATT-ATTTTAGGC..........................................................................................................................................................	19	20	0.35	7	0	7	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	19	20	0.35	7	7	0	0	0	0	0
....AAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	19	20	0.35	7	3	3	0	1	0	0
...................................................................AATAA---ATTTATTGAAGGAAT--------------T...............................................................................................................	21	20	0.35	7	0	7	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATGC........................................................................................................	20	20	0.35	7	0	0	0	0	4	3
.....................................................................TAA---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	25	20	0.30	6	0	6	0	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAAC........................................................................................................................................................................	22	20	0.30	6	0	6	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	20	0.30	6	0	1	0	0	5	0
......A-----------------------ACTAAGACATTTCGCAACAATT-...................................................................................................................................................................	23	20	0.30	6	0	0	5	0	0	1
.......................................................................................AAT--------------TGATATATGCCAGTTAAATGGTGTA.......................................................................................	28	20	0.30	6	0	6	0	0	0	0
.....................................CATTTCGCAACAATT-ATTTTAGGTA.........................................................................................................................................................	25	20	0.30	6	4	2	0	0	0	0
.................................AAGACATTTCGCAACAATT-ATTTTAGGT..........................................................................................................................................................	28	20	0.30	6	0	4	2	0	0	0
...................................................................................................................................................AAAAATATAAATGACGAA---TTGT............................................	22	20	0.30	6	0	0	2	0	4	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTTA................................................................................................	28	20	0.30	6	0	5	0	1	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	20	0.30	6	3	0	2	0	0	1
....................................................................................................................................................AAAATATAAATGACGAA---TTGT............................................	21	20	0.30	6	0	4	0	0	2	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	20	0.30	6	0	6	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTTAAATG............................................................................................	22	20	0.30	6	0	6	0	0	0	0
................................................................AAAAATAA---ATTTATTGAAGGAAT--------------T...............................................................................................................	24	20	0.30	6	0	6	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTTAA...............................................................................................	26	20	0.30	6	0	2	3	1	0	0
.........................................................................................................................................................ATAAATGACGAA---TTGTAT-.........................................	18	20	0.25	5	0	3	2	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGT......................................................................................................	20	20	0.25	5	0	2	0	0	3	0
..ATAAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	21	20	0.25	5	0	5	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	20	0.25	5	1	4	0	0	0	0
.......................................................................................................................................................................................ATATATT---T-------ATAAAACTCTAAGC.	22	20	0.25	5	0	5	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAACAATT-AT.................................................................................................................................................................	26	20	0.25	5	1	4	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	20	0.25	5	1	0	0	0	4	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGT......................................................................................................	23	20	0.25	5	0	2	0	0	0	3
....................................................................ATAA---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	24	20	0.25	5	0	2	0	0	3	0
.................................................................................................................................................ATAAAAATATAAATGACGAA---TT..............................................	22	20	0.25	5	0	5	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	20	0.25	5	1	0	1	0	3	0
.....................................CATTTCGCAACAATT-ATTTTAGGTAT........................................................................................................................................................	26	20	0.25	5	0	5	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTT.................................................................................................	27	20	0.25	5	0	4	1	0	0	0
......................................................................AA---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	27	20	0.25	5	0	4	0	0	0	1
.TATAAA-----------------------ACTAAGACATTTCGC...........................................................................................................................................................................	21	20	0.25	5	0	5	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAAT.....................................................................	18	20	0.25	5	0	5	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAAAA.................................................................................................	25	20	0.25	5	0	4	1	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATAT..........................................................................................................	20	20	0.25	5	0	1	0	0	4	0
.TATAAA-----------------------ACTAAGACATTTCGCAACAAT.....................................................................................................................................................................	27	20	0.25	5	4	0	1	0	0	0
......................................ATTTCGCAACAATT-ATTTTAGG...........................................................................................................................................................	22	20	0.25	5	0	5	0	0	0	0
.........................................................................................................................................................ATAAATGACGAA---TTGTAT-ATATT-...................................	23	20	0.25	5	0	5	0	0	0	0
.........................................................................................................GATATATGCCAGTTAAATGGTGTAT......................................................................................	25	20	0.25	5	0	5	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCA.......................................................................	20	20	0.25	5	0	5	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTTAAA..............................................................................................	27	20	0.25	5	1	1	2	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	20	0.25	5	3	2	0	0	0	0
.....................................................................................................................................................AAATATAAATGACGAA---TTGTAC-.........................................	22	20	0.25	5	0	5	0	0	0	0
...............................CTAAGACATTTCGCAACA.......................................................................................................................................................................	18	20	0.25	5	0	2	3	0	0	0
...........................................GCAACAATT-ATTTTAGGT..........................................................................................................................................................	18	20	0.25	5	0	5	0	0	0	0
...................................................................................................................AGTTAAATGGTGTATTTTTAATT..............................................................................	23	20	0.25	5	0	5	0	0	0	0
..................................................................AAATAA---ATTTATTGAAGGAAT--------------T...............................................................................................................	22	20	0.25	5	0	5	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAACAATT-ATT................................................................................................................................................................	26	20	0.25	5	2	3	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCAC....................................................................................................	24	20	0.20	4	0	4	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	0.20	4	4	0	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATA....................................................................	19	20	0.20	4	0	4	0	0	0	0
ATATAAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	23	20	0.20	4	0	2	2	0	0	0
...TAAA-----------------------ACTAAGACATTTCGCAACA.......................................................................................................................................................................	23	20	0.20	4	1	2	0	0	1	0
................................................................................TTGAAGGAAT--------------TGATATATGCT.....................................................................................................	21	20	0.20	4	1	0	1	0	0	2
................................................................................TTGAAGGAAT--------------TGATATATGCCTT...................................................................................................	23	20	0.20	4	0	0	1	0	2	1
...................................GACATTTCGCAACAATT-ATT................................................................................................................................................................	20	20	0.20	4	1	3	0	0	0	0
.............................................AACAATT-ATTTTAGGTAT........................................................................................................................................................	18	20	0.20	4	0	4	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	20	0.20	4	0	1	1	0	0	2
...............................................................TAAAAATAA---ATTTATTGAAGGAAT--------------TGA.............................................................................................................	27	20	0.20	4	0	4	0	0	0	0
.............................................AACAATT-ATTTTAGGTATAAAAAT..................................................................................................................................................	24	20	0.20	4	0	4	0	0	0	0
.......................................................................................................................................................ATATAAATGACGAA---TTGTAT-.........................................	20	20	0.20	4	0	2	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCG.....................................................................................................	23	20	0.20	4	0	3	1	0	0	0
.....................................................................TAA---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	28	20	0.20	4	0	0	3	0	1	0
.......................................TTTCGCAACAATT-ATTTTAGGC..........................................................................................................................................................	22	20	0.20	4	0	4	0	0	0	0
..................................................................................................................................TTTTAATTTCTTTCAATA....................................................................	18	20	0.20	4	0	4	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	25	20	0.20	4	0	3	1	0	0	0
........................................TTCGCAACAATT-ATTTTAGGTA.........................................................................................................................................................	22	20	0.20	4	0	4	0	0	0	0
...................................................................................................................................................AAAAATATAAATGACGAA---TTGTAT-.........................................	24	20	0.20	4	0	0	0	0	4	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCTT...................................................................................................	25	20	0.20	4	2	0	0	0	2	0

droBip1

ATATAAA-----------------------ACTAAGACATTTCGCAACAATT-ATTTTAGGTATAAAAATAA---CTTTATTGAAGGAAT--------------TGATATATGCCAGTTAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATAATTGACGAA---TTGTAT-A--TTTATATATATT---T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ATATAAA-----------------------ACTAAGACATTTCGCAGCATTTCGTTTTAGGTATAAAAAAAAAAGATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAATTCATATTTGACAAA---TTGAAA-------TAATAAAT----A-------TAAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AA-----------------------------------------------------------------AACAT---ATCTGTAGAAAAA--------------------------------------------------------------------------------ATGTAT-------AAACAAAT----T-------TT-------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATATAAA-----------------------ACTAAGACATTTCGCAGCATTC-TTTTTAGGTATAAAAAAAA--CATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATACTTGACAAA---TTGAAA-------AAACAAATA---T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ATATAAA-----------------------ACTAAGACATTTCGCAGCATTC-GTTTTAGGTATAAAAATAA---AATTATTGAAGGAAT--------------TGATATATGCCAGTAAGACGGTGTATTTTTAATTTCTTTCAATAAAAACATATTTGACAAA---ATTAAC-------AAACCAGTT---T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AAACAAA-----------------------CCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAACTTTCAACA	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATATGAA-----------------------ACTAAGACATTTCGCAACATTT-ATTTTAGGTATATAAATAC---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACATAATTGACATT---ATATAA-------AAATGAAT----T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	6066.65	121333	0	0	0	0	0	0	0	0	0	0	14	0	9	0	0	0	0	0	4	0	0	0	0	0	0	0	0	366	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2324	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	116	0	0	0	0	0	0	0	0	0	0	0	0	24	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	425	0	133	1	0	65	0	0	0	7	0	0	0	0	0	0	0	0	0	149	0	22	0	5184	3894	0	0	0	0	3386	0	0	4223	0	0	0	0	0	0	0	0	0	144	0	0	0	0	68	0	0	0	115	0	0	0	196	0	0	0	0	0	0	0	0	0	0	141	14	0	0	1036	0	0	0	0	0	475	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4395	0	831	0	2794	4810	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	494	0	0	0	0	0	0	856	0	0	0	532	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16352	0	6269	0	0	3591	0	0	0	0	0	0	0	0	0	0	5731	0	0	0	0	0	9373	0	0	18444	0	0	1591	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1792	0	0	0	14706	0	0	0	0	0	0	6223	0
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	2639.85	52797	0	0	0	0	0	0	0	9	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	219	3	0	0	0	0	0	0	2506	0	0	0	0	0	147	0	0	0	0	0	0	0	1073	0	0	0	0	0	99	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	55	0	0	0	0	0	0	0	53	0	0	0	0	0	0	0	0	100	0	0	0	0	0	0	0	47	0	0	0	0	0	0	0	0	0	1	0	0	0	0	95	0	0	0	36	0	0	0	0	0	0	0	0	0	24	0	0	3354	1815	0	0	0	0	1896	2987	0	0	0	0	1107	0	0	6	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	80	107	0	0	0	0	0	0	0	0	0	0	0	0	0	514	0	0	0	0	11	0	604	0	0	0	1	0	0	0	0	339	0	0	0	0	0	0	5	0	1109	0	0	0	331	0	0	0	0	0	0	0	0	3385	0	0	0	0	0	0	0	0	392	0	0	338	0	0	0	0	0	0	0	258	0	0	0	0	813	0	0	0	0	0	0	0	0	1129	0	0	0	0	0	0	0	0	0	7806	0	0	0	0	0	3290	0	0	0	0	0	1598	0	0	0	6099	0	0	1113	0	0	2114	0	0	0	0	0	3146	0	0	985	301	0	0	0	0	0	0	0	0	0	0	0	0	0	1279	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	1475.30	29506	0	0	0	0	0	7	10	12	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0	0	0	0	3	0	0	0	0	0	3	0	0	0	0	547	0	0	0	0	0	0	0	0	0	0	0	0	1249	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0	0	0	0	28	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	18	63	0	0	0	0	0	0	0	0	0	0	0	0	40	0	0	0	0	34	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	69	0	0	0	0	4	0	0	0	571	0	0	4928	0	0	1607	1411	1134	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	80	0	0	0	0	4	0	0	0	0	42	0	0	0	0	0	0	0	0	0	0	0	0	48	0	0	0	0	158	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	221	0	2836	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	229	0	0	0	117	0	0	132	0	0	0	117	0	0	0	0	0	0	0	0	0	0	0	387	0	0	0	0	0	0	0	0	0	0	4506	0	0	0	0	0	0	85	0	0	0	1422	0	0	0	0	0	0	0	0	0	0	0	7026	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	251	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	1326.35	26527	0	0	0	0	0	0	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	887	0	0	0	269	807	848	0	0	1209	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	0	0	0	0	9	8	0	63	0	0	0	0	0	19	0	0	0	0	39	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	135	262	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	572	0	0	0	1	0	0	0	28	0	0	0	0	251	0	0	458	0	0	0	0	0	0	0	0	0	0	0	0	0	0	180	0	0	0	77	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	246	356	0	365	0	0	0	0	0	0	0	0	0	10792	0	0	0	0	0	0	0	0	0	367	0	0	0	0	889	258	0	0	245	0	0	0	6642	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0	133	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	1208.05	24161	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	301	0	0	425	0	0	0	247	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	26	0	0	0	0	0	0	0	1	0	0	0	0	0	0	66	7	0	0	0	0	0	14	0	0	42	0	0	13	10	0	0	0	0	1	0	0	0	0	0	3	1	5	0	4	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	209	0	0	0	0	0	0	0	0	555	0	0	0	0	0	0	0	0	0	0	0	0	0	0	46	0	0	0	0	0	0	0	12	0	3	0	0	0	23	0	0	0	9	1	0	0	0	0	0	0	0	0	87	6	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	101	0	2437	0	0	0	0	0	844	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	71	0	0	0	0	0	0	0	0	0	0	0	0	265	258	25	0	0	0	0	0	85	0	0	6054	0	0	0	0	0	4149	0	0	242	0	0	0	0	0	0	0	0	0	0	0	0	1338	0	1056	3561	0	0	270	0	0	0	0	0	0	750	0	499	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	20	477.50	9550	0	0	0	0	1	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	121	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	178	0	0	512	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	9	0	0	0	80	0	12	8	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1033	0	884	0	765	0	0	0	397	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	23	0	0	0	0	0	0	0	421	980	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	828	1263	262	378	0	0	0	0	0	18	0	0	0	0	0	0	71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	6	0	19	0	0	0	0	0	1059	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	42	0	2	0	0	0	0	0	0	40	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	260.65	5213	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	11	0	15	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	94	0	0	0	0	0	0	0	0	11	0	0	0	6	0	0	0	0	0	0	0	0	7	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	52	0	0	0	0	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	196	746	3959	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	28	0	0	0	0	0	0	0	0	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	20	201.70	4034	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	69	153	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	41	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0	0	0	0	0	0	0	1832	0	0	0	12	0	0	0	0	0	0	0	31	0	0	0	0	1658	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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......................................................................AC---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	27	20	1.50	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................TAAATAC---ATTTATTGAAGGAAT--------------TGA.............................................................................................................	25	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	10	0	0	0	0	0	0	0	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCG....................................................................................................	22	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	10	0	0	0	0	0	0	1	0	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	20	1.45	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	3	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATA...........................................................................................................	17	20	1.40	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	0	6	0	0	0	12	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGA.............................................................................................................	21	20	1.40	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATG.........................................................................................................	19	20	1.40	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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droSim2

------------------------------------------------------TTTTAGGTATAAAAATAA---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTACTTTCTTTCAATAAAAACAATATTGACATT---ATATAA-------AAATGAAT----T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	3	6985.33	20956	204	79	580	120	7140	7476	862	1094	221	139	2406	613	11	11	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	3	6952.00	20856	213	77	401	212	2310	1512	1670	1644	678	441	6951	4700	19	28	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	3	3239.00	9717	15	8	47	101	1050	1512	580	604	372	257	4480	682	3	5	0	0	1
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	3	2552.33	7657	38	16	79	191	1596	714	389	405	238	153	2884	904	3	46	0	0	1
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	3	2229.67	6689	173	75	319	48	924	1344	211	246	73	61	2592	614	2	7	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	3	1976.67	5930	42	21	48	6	2310	1470	11	10	11	15	1983	2	0	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	3	1405.00	4215	0	0	61	88	84	84	419	478	618	444	1485	448	5	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	3	1267.67	3803	23	9	9	23	2142	840	64	76	282	186	124	11	0	14	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	3	1021.67	3065	2	2	40	20	0	0	324	370	1242	815	92	150	6	2	0	0	0
................................................................................TTGAAGGAAT--------------TGATATAT........................................................................................................	18	3	602.00	1806	0	0	0	1	546	1218	5	3	3	4	26	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	3	530.33	1591	8	9	18	12	126	336	91	83	27	20	605	251	0	5	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	3	517.00	1551	0	0	2	9	294	546	28	48	44	70	466	43	0	1	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	3	478.33	1435	19	7	41	15	378	546	23	37	6	4	295	59	4	1	0	0	0
................................................................................TTGAAGGAAT--------------TGATATA.........................................................................................................	17	3	429.67	1289	0	0	0	0	0	0	0	0	6	0	1283	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATAT..........................................................................................................	18	3	428.67	1286	3	2	0	1	966	252	9	6	10	3	34	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	3	343.33	1030	0	0	1	8	252	420	10	4	3	1	312	19	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATA.........................................................................................................	16	3	316.67	950	0	0	0	0	0	0	0	1	0	0	949	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	3	250.33	751	2	0	11	13	84	210	38	40	14	15	107	217	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	3	245.00	735	0	0	3	5	294	252	0	2	11	19	143	6	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	3	241.67	725	0	0	0	1	168	378	4	7	4	28	118	0	2	15	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	27	3	234.33	703	0	0	0	10	84	42	20	14	26	42	459	1	5	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	25	3	233.67	701	0	0	0	1	294	294	8	13	13	18	52	0	5	3	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	3	209.33	628	5	2	4	31	0	42	53	30	8	7	351	94	0	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	3	207.00	621	0	0	0	7	294	294	6	7	7	2	3	1	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATA...........................................................................................................	18	3	172.67	518	2	1	1	0	210	252	9	6	13	13	9	2	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	3	144.33	433	0	0	1	4	0	0	41	51	178	121	13	13	0	11	0	0	0
.................................................................................................................................................................................................T-------ATAAAACTCTAAGCG	16	1	133.00	133	0	0	0	0	0	0	2	5	1	1	124	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	3	130.00	390	24	3	4	1	168	126	2	3	2	2	54	1	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	3	122.00	366	22	6	31	6	0	0	37	29	18	9	178	30	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	3	115.33	346	6	0	3	4	126	168	3	2	12	8	7	0	0	7	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATG.......................................................................................................	18	3	111.67	335	0	0	0	0	0	84	0	0	0	0	250	1	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	3	100.33	301	20	1	18	15	42	42	10	15	12	11	80	34	0	1	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATA.........................................................................................................	18	3	84.33	253	0	0	0	0	84	42	1	0	0	0	126	0	0	0	0	0	0
.........................................................................................................................................................................................................ATAAAACTCTAAGCG	15	1	81.00	81	0	0	0	0	0	0	1	1	0	4	75	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	3	80.67	242	0	0	0	1	42	84	3	0	2	9	84	17	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCCAG...................................................................................................	20	4	73.75	295	0	0	0	0	84	210	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................T-------ATAAAACTCTAAGC.	15	1	72.00	72	0	0	0	0	0	0	4	4	1	3	60	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	23	3	70.67	212	0	0	0	0	84	126	0	0	0	0	2	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	3	69.00	207	1	2	2	1	0	0	47	57	61	24	10	2	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	26	3	66.00	198	0	0	0	5	0	0	11	14	14	17	134	1	2	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATA...........................................................................................................	17	3	61.00	183	0	0	0	0	0	0	4	8	1	1	169	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	3	57.33	172	0	0	2	8	42	0	8	0	3	1	95	12	0	1	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	3	53.33	160	5	4	10	0	0	0	14	6	8	2	101	10	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	3	52.33	157	1	0	1	4	0	84	7	4	6	3	43	0	3	1	0	0	0
.........................................................................................................................................................................................GAAT----T-------ATAAAACTCTAAGCG	20	1	45.00	45	0	0	0	0	45	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	3	44.00	132	0	0	0	11	0	0	8	14	9	10	73	6	1	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCCAGTAA................................................................................................	23	4	42.25	169	0	0	0	0	0	168	0	0	0	1	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	3	35.67	107	2	0	0	8	0	42	2	4	4	2	39	1	3	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	3	34.67	104	0	0	0	0	0	84	10	4	2	1	2	0	0	1	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	3	34.67	104	0	0	0	0	0	42	1	3	4	1	47	0	3	3	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	3	32.67	98	1	1	0	0	42	42	3	1	3	5	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	3	32.67	98	0	0	0	6	0	0	4	9	22	18	36	1	2	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	26	3	31.67	95	0	0	0	0	42	42	3	1	1	0	6	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGA.............................................................................................................	15	4	29.75	119	0	0	0	0	0	0	24	30	28	10	27	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	3	26.00	78	1	1	1	4	0	0	7	11	11	6	32	2	1	1	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	28	3	24.33	73	0	0	0	2	0	0	14	11	13	10	23	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATAT........................................................................................................	22	3	23.00	69	1	0	1	1	0	42	0	3	11	9	0	1	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATA...........................................................................................................	15	3	22.33	67	0	0	0	0	0	0	8	5	1	1	52	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATAT........................................................................................................	19	3	21.67	65	1	0	0	2	42	0	5	2	7	1	5	0	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	25	4	21.50	86	0	0	0	0	42	42	0	0	0	1	1	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	3	21.33	64	2	1	0	2	0	0	5	3	1	1	26	18	0	5	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGAA.....................................................................................................	23	4	21.25	85	0	0	0	3	0	0	5	4	39	33	1	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	4	21.25	85	0	0	0	2	0	0	0	0	0	0	82	1	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	24	4	21.00	84	0	0	0	0	84	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	3	17.33	52	0	0	3	2	0	0	9	8	5	4	11	10	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	3	17.33	52	0	0	0	0	42	0	5	3	0	0	2	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATAT........................................................................................................	23	3	17.00	51	1	0	0	0	0	0	8	9	15	17	0	0	0	1	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	3	17.00	51	1	0	0	1	0	42	2	2	0	1	2	0	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	3	17.00	51	0	0	3	3	0	44	0	0	0	0	1	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	4	16.50	66	0	0	0	0	0	42	0	0	0	1	22	1	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	23	3	15.33	46	0	0	0	2	0	0	2	3	6	6	25	1	0	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	28	3	15.00	45	0	0	0	2	42	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	26	3	14.33	43	0	0	1	3	0	0	3	2	13	9	12	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	28	3	14.00	42	0	0	0	0	0	42	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATA.........................................................................................................	15	4	13.50	54	0	0	0	0	0	0	0	0	0	0	54	0	0	0	0	0	0
.....................................................................................................................................................................................AAATGAAT----T-------ATAAAACTCTAAGCG	24	1	13.00	13	0	0	0	0	0	0	8	0	4	1	0	0	0	0	0	0	0
.....................................................................TAA---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	25	2	12.50	25	0	0	0	0	0	0	1	0	3	5	16	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATA.......................................................................................................	21	3	12.33	37	0	0	0	1	0	0	4	3	14	8	7	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	3	12.00	36	0	0	2	7	0	0	5	6	1	0	13	2	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	24	3	12.00	36	0	0	0	1	0	0	0	6	12	13	1	3	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCCAG...................................................................................................	21	4	11.50	46	0	0	0	0	0	42	0	0	0	0	4	0	0	0	0	0	0
............................................................................................................................................................................................T----T-------ATAAAACTCTAAGC.	16	1	11.00	11	0	0	0	0	0	0	3	2	1	1	4	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	3	11.00	33	0	0	0	0	0	0	0	0	3	1	25	4	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATG.......................................................................................................	17	4	11.00	44	0	0	0	0	0	0	0	0	0	0	44	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGA.............................................................................................................	17	4	10.75	43	0	0	0	0	0	0	12	15	12	2	2	0	0	0	0	0	0
.......................................................................................AAT--------------TGATATATGCCAGTA.................................................................................................	18	4	10.75	43	0	0	0	0	43	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCA.....................................................................................................	21	3	10.67	32	0	0	0	1	0	0	4	4	10	2	6	5	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	27	3	10.67	32	0	0	0	0	0	0	0	10	5	1	16	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	3	10.00	30	1	1	0	1	0	0	7	5	3	9	3	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	3	9.67	29	0	0	0	6	0	0	2	4	1	2	12	0	2	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	3	9.67	29	2	0	0	1	0	0	0	4	1	1	20	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	28	2	9.50	19	0	0	0	0	0	0	3	2	0	0	8	3	3	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	3	8.67	26	1	0	0	0	0	0	0	0	1	3	21	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	3	8.67	26	0	0	0	2	0	0	5	2	11	4	2	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	3	8.67	26	0	0	0	1	0	0	5	7	0	2	8	2	1	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATAT..........................................................................................................	20	3	8.67	26	0	0	0	0	0	0	10	7	5	3	1	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGA.............................................................................................................	16	4	8.50	34	0	0	0	0	0	0	10	14	2	7	1	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	4	8.50	34	0	0	0	0	0	0	1	0	0	0	33	0	0	0	0	0	0
............................................................................................................................................................................................T----T-------ATAAAACTCTAAGCG	17	1	8.00	8	0	0	0	0	0	0	0	0	1	0	7	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	3	8.00	24	0	0	0	2	0	0	2	3	1	1	13	2	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGAT............................................................................................................	16	4	7.75	31	0	0	0	0	0	0	3	2	1	2	23	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	30	3	7.33	22	0	0	0	0	0	0	6	7	2	0	7	0	0	0	0	0	0
.....................................................................................................................................................................................AAATGAAT----T-------ATAAAACTCTAAGC.	23	1	7.00	7	0	0	0	0	0	0	5	0	1	1	0	0	0	0	0	0	0
.......................................................................A---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	2	7.00	14	0	0	1	4	0	0	1	2	1	0	3	2	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCG....................................................................................................	22	3	7.00	21	0	0	1	0	0	0	0	0	0	2	18	0	0	0	0	0	0
...........................................................................................................................................................................................AT----T-------ATAAAACTCTAAGCG	18	1	7.00	7	1	0	2	1	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCC....................................................................................................	24	3	6.67	20	3	0	5	0	0	0	1	1	0	0	3	7	0	0	0	0	0
.....................................................................TAA---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	28	2	6.50	13	0	0	0	0	0	0	3	3	1	3	3	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	3	6.33	19	0	0	2	1	0	0	3	4	2	2	5	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCG.....................................................................................................	23	3	6.00	18	0	0	6	0	0	0	3	1	4	3	0	1	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATAT........................................................................................................	17	3	6.00	18	0	0	0	0	0	0	0	0	1	0	17	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	24	3	6.00	18	0	0	0	1	0	0	2	0	1	0	14	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	28	3	6.00	18	0	0	0	0	0	0	2	2	5	4	1	0	2	2	0	0	0
................................................................................TTGAAGGAAT--------------TGATAT..........................................................................................................	16	3	6.00	18	0	0	0	0	0	0	3	2	1	0	12	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	29	3	5.67	17	0	0	0	0	0	0	6	4	3	2	2	0	0	0	0	0	0
.......................................................................A---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	23	2	5.50	11	0	0	1	0	0	0	0	0	0	0	10	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCG....................................................................................................	24	3	5.00	15	0	0	1	1	0	0	1	0	1	3	5	3	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATG.........................................................................................................	19	3	5.00	15	0	0	0	1	0	0	0	1	0	0	11	0	0	2	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGAT............................................................................................................	17	4	5.00	20	0	0	0	0	0	0	2	4	6	2	6	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGA......................................................................................................	20	3	5.00	15	0	0	0	0	0	0	4	1	6	1	3	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAT...................................................................................................	23	3	4.67	14	0	0	0	0	0	0	0	0	0	1	10	3	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCT.....................................................................................................	21	3	4.67	14	0	0	0	1	0	0	1	4	0	0	6	2	0	0	0	0	0
......................................................................................................................................................AACAATATTGACATT---ATATAA-------AAATGA.............................	27	2	4.50	9	0	0	0	0	0	0	4	2	1	2	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	3	4.33	13	0	0	0	4	0	0	0	4	1	0	3	0	1	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	28	3	4.33	13	0	0	0	1	0	0	2	3	2	2	3	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATAT..........................................................................................................	15	3	4.33	13	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0
...............................................................TAAAAATAA---ATTTATTGAAGGAAT--------------TGA.............................................................................................................	27	3	4.33	13	0	0	0	0	0	0	2	2	4	5	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	24	3	4.33	13	0	0	0	1	0	0	0	4	0	1	5	1	1	0	0	0	0
.......................................................................A---ATTTATTGAAGGAAT--------------T...............................................................................................................	17	3	4.33	13	0	0	0	0	0	0	2	3	0	0	8	0	0	0	0	0	0
.....................................................................................................................................................................................AAATGAAT----T-------ATAAAACTCTAAG..	22	1	4.00	4	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAC...................................................................................................	22	3	4.00	12	0	0	0	0	0	0	0	0	0	1	9	1	0	1	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGA......................................................................................................	21	3	3.67	11	0	0	0	0	0	0	2	0	2	4	2	1	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	3	3.67	11	0	0	0	0	0	0	1	2	2	0	6	0	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCCA....................................................................................................	19	4	3.50	14	0	0	0	0	0	0	0	0	1	0	13	0	0	0	0	0	0
......................................................................AA---ATTTATTGAAGGA................................................................................................................................	15	5	3.40	17	0	0	0	0	0	0	10	7	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAAA.............................................................................................	28	3	3.33	10	0	0	0	0	0	0	1	2	1	1	5	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	27	3	3.33	10	0	0	0	2	0	0	0	1	1	1	2	0	3	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGA......................................................................................................	23	3	3.33	10	0	0	0	0	0	0	0	0	4	4	1	1	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGA.............................................................................................................	18	4	3.25	13	0	0	0	0	0	0	4	4	1	2	2	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGAT............................................................................................................	18	4	3.00	12	0	0	0	0	0	0	7	1	2	1	1	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCC....................................................................................................	22	3	3.00	9	0	0	3	0	0	0	0	0	0	0	2	4	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGC......................................................................................................	17	4	3.00	12	0	0	0	0	0	0	0	2	0	0	10	0	0	0	0	0	0
.........................................................................................................................................................................................GAAT----T-------ATAAAACTCTAAGC.	19	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAA...................................................................................................	22	3	3.00	9	0	0	0	0	0	0	0	0	0	4	4	1	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	3	3.00	9	1	0	0	1	0	0	2	1	1	0	2	1	0	0	0	0	0
......................................................................................................................................................................................AATGAAT----T-------ATAAAACT.......	16	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------T...............................................................................................................	16	4	2.75	11	0	0	0	0	0	0	2	4	0	1	4	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	25	3	2.67	8	0	1	0	0	0	0	1	1	0	0	3	1	0	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAT...................................................................................................	25	3	2.67	8	0	0	0	0	0	0	0	2	1	0	4	1	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------T...............................................................................................................	15	6	2.67	16	0	0	0	0	0	0	7	5	0	3	1	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	3	2.67	8	0	0	0	2	0	0	0	2	1	0	2	1	0	0	0	0	0
.............................................................TATAAAAATAA---ATTTATTGAAGGAA...............................................................................................................................	25	4	2.50	10	0	0	0	0	0	0	1	6	1	2	0	0	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATG.......................................................................................................	16	4	2.50	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	3	2.33	7	2	1	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	22	3	2.33	7	0	0	0	0	0	0	1	1	2	1	1	1	0	0	0	0	0
...............................................................TAAAAATAA---ATTTATTGAAGGAAT--------------T...............................................................................................................	25	3	2.33	7	0	0	4	1	0	0	2	0	0	0	0	0	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAC...................................................................................................	23	3	2.33	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGTA.....................................................................................................	23	3	2.33	7	0	0	0	0	0	0	2	0	0	2	1	1	0	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGAA.....................................................................................................	24	3	2.00	6	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0
...........................................................................................................................................................................................AT----T-------ATAAAACTCTAAGC.	17	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..................................................................AAATAA---ATTTATTGAAGGA................................................................................................................................	19	4	2.00	8	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................AAT----T-------ATAAAACTCTAAGCG	19	1	2.00	2	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................ATGAAT----T-------ATAAAACTCTAAGC.	21	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................GGAAT--------------TGATATATGCCA....................................................................................................	17	4	2.00	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
.....................................................................TAA---ATTTATTGAAGGA................................................................................................................................	16	4	2.00	8	0	0	0	0	0	0	3	4	1	0	0	0	0	0	0	0	0
.............................................................TATAAAAATAA---ATTTATTGAAGGAAT--------------TGA.............................................................................................................	29	3	2.00	6	0	0	0	0	0	0	1	2	2	1	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGG......................................................................................................	22	3	2.00	6	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	0
......................................................................AA---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	24	2	2.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATT.........................................................................................................	19	3	2.00	6	0	0	0	0	0	0	1	1	0	0	4	0	0	0	0	0	0
...........................................................GGTATAAAAATAA---ATTTATTGAAGGAA...............................................................................................................................	27	4	1.75	7	0	0	0	0	0	0	0	2	3	2	0	0	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCC.....................................................................................................	18	4	1.75	7	0	2	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0
..............................................................ATAAAAATAA---ATTTATTGAAGGA................................................................................................................................	23	4	1.75	7	0	0	0	4	0	0	0	1	2	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCAC....................................................................................................	24	3	1.67	5	0	0	1	0	0	0	0	1	2	1	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATC.......................................................................................................	21	3	1.67	5	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAT................................................................................................	25	3	1.67	5	0	0	0	0	0	0	0	1	1	0	3	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATA...........................................................................................................	16	3	1.67	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.......................................................................A---ATTTATTGAAGGAAT--------------TG..............................................................................................................	18	3	1.67	5	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0
......................................................................AA---ATTTATTGAAGGAAT--------------T...............................................................................................................	18	3	1.67	5	0	0	1	2	0	0	1	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................AAAAACAATATTGACATT---AT..............................................	20	3	1.67	5	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

ATATGAA-----------------------ACTAAGACATTTCGCAACGTTT-ATTTTAGGTATAAAAATAA---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACAATATTGACATT---ATATAA-------AAATAAAT----T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	465.00	9300	0	3873	5427	0
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	310.75	6215	700	2542	1566	1407
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	119.20	2384	0	0	2384	0
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	69.25	1385	375	0	1010	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	26.35	527	0	527	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	20	18.10	362	0	206	0	156
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	20	11.70	234	0	0	0	234
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	20	11.40	228	0	0	172	56
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	20	10.95	219	68	0	0	151
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	20	10.05	201	197	1	3	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	20	9.45	189	0	62	64	63
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	20	7.15	143	0	0	0	143
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	20	5.45	109	0	0	109	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	20	5.00	100	13	0	87	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	4.45	89	89	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	20	3.85	77	0	0	31	46
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	20	2.10	42	2	21	19	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	20	1.95	39	0	28	0	11
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	20	1.90	38	0	0	23	15
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	20	1.70	34	0	10	24	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	20	1.70	34	20	0	14	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	20	1.45	29	28	1	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	20	1.30	26	0	24	0	2
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	20	1.25	25	0	19	6	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	20	1.20	24	7	0	4	13
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	20	1.05	21	0	0	20	1
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	20	1.00	20	0	14	6	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	20	0.95	19	0	16	3	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	20	0.75	15	10	3	0	2
..............................................................................TATTGAAGGAAT--------------TGATAT..........................................................................................................	18	20	0.75	15	5	1	4	5
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	20	0.60	12	10	2	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAC..................................................................	24	20	0.55	11	11	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	20	0.45	9	9	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	20	0.45	9	9	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATGC........................................................................................................	21	20	0.45	9	0	0	9	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	20	0.45	9	9	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	20	0.40	8	8	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	20	0.40	8	8	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	20	0.35	7	0	7	0	0
......................................................................AA---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	27	20	0.35	7	0	1	6	0
...............................................................................ATTGAAGGAAT--------------TGATATA.........................................................................................................	18	20	0.35	7	3	0	2	2
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	20	0.35	7	7	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	20	0.30	6	6	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	20	0.30	6	5	0	1	0
...........................................................................ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	20	0.30	6	2	0	4	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	20	0.25	5	0	0	5	0
.....................................................................TAA---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	25	20	0.25	5	0	0	5	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	20	0.25	5	0	5	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGT........................................................................................	26	20	0.25	5	0	0	5	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	26	20	0.25	5	2	0	0	3
..............................ACTAAGACATTTCGCAAC........................................................................................................................................................................	18	20	0.20	4	0	0	4	0
..............................................................................TATTGAAGGAAT--------------TGATATATGG......................................................................................................	22	20	0.20	4	1	0	0	3
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	25	20	0.20	4	0	0	0	4
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	20	0.20	4	0	0	2	2
................................................................................................................................ATTTTTAATTTCTTTCAATAAA..................................................................	22	20	0.20	4	4	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATAT........................................................................................................	22	20	0.20	4	2	0	0	2
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	27	20	0.15	3	1	1	0	1
...............................................................................ATTGAAGGAAT--------------TGATATGCC.......................................................................................................	20	20	0.15	3	0	0	3	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	24	20	0.15	3	0	0	1	2
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	20	0.15	3	2	1	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	20	0.15	3	0	0	0	3
..............................................................................TATTGAAGGAAT--------------TGATATATGCCTT...................................................................................................	25	20	0.15	3	0	0	0	3
...............................................................................................................................TATTTTTAATTTCTTTCAATAA...................................................................	22	20	0.10	2	2	0	0	0
.........................................................................................................GATATATGCCAGTAAAATGGTGT........................................................................................	23	20	0.10	2	0	0	2	0
..................................................................................................................CAGTAAAATGGTGTATTTTT..................................................................................	20	20	0.10	2	0	0	2	0
........................................................................................................................AATGGTGTATTTTTAATTTCTTTCAATAA...................................................................	29	20	0.10	2	2	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATT....................................................................	22	20	0.10	2	2	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAAA..................................................................................................	24	20	0.10	2	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATC.......................................................................................................	21	20	0.10	2	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGAA.....................................................................................................	23	20	0.10	2	0	0	2	0
.................................................................................................................................TTTTTAATTTCTTTCAATAAA..................................................................	21	20	0.10	2	2	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	23	20	0.10	2	2	0	0	0
...........................................................................................................TATATGCCAGTAAAATGGTGT........................................................................................	21	20	0.10	2	0	0	2	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	20	0.10	2	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	28	20	0.10	2	2	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATG...........................................................................................................	19	20	0.10	2	0	0	0	2
...................................................................................AAGGAAT--------------TGATATATGCC.....................................................................................................	18	20	0.10	2	2	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGA.............................................................................................................	18	20	0.10	2	0	0	2	0
ATATGAA-----------------------ACTAAGACATTT..............................................................................................................................................................................	19	20	0.05	1	0	0	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAAA................................................................	26	20	0.05	1	1	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATAC........................................................................................................	19	20	0.05	1	0	0	1	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	20	0.05	1	0	0	0	1
..........................................................................................................ATATATGCCAGTAAAATGGTGT........................................................................................	22	20	0.05	1	0	0	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	20	0.05	1	0	1	0	0
.................................................................................TGAAGGAAT--------------TGATATATGT......................................................................................................	19	20	0.05	1	0	1	0	0
...........................................................................................................................................................................................AT----T-------ATAAAACTCTAAGCG	18	20	0.05	1	0	0	1	0
...........................................................................................................TATATGCCAGTAAAATGGTA.........................................................................................	20	20	0.05	1	1	0	0	0
........................................................................................................................AATGGTGTATTTTTAATTTCTTTCAAT.....................................................................	27	20	0.05	1	1	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAT..................................................................	22	20	0.05	1	1	0	0	0
..................................................................AAATAA---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	26	20	0.05	1	0	0	1	0
..........................................................................................................ATATATGCCAGTAAAATGG...........................................................................................	19	20	0.05	1	1	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	20	0.05	1	0	0	1	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAATT..............................................................................	24	20	0.05	1	1	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATG.........................................................................................................	21	20	0.05	1	0	0	0	1
............................................................................................................ATATGCCAGTAAAATGGTGT........................................................................................	20	20	0.05	1	1	0	0	0
.................................................................AAAATAA---ATTTATTGAAGGAAT--------------TG..............................................................................................................	24	20	0.05	1	0	0	1	0
................................................................................TTGAAGGAAT--------------TGATATAT........................................................................................................	18	20	0.05	1	1	0	0	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAA................................................................................	22	20	0.05	1	0	0	1	0
...........................................................................................................................GGTGTATTTTTAATTTCTTT.........................................................................	20	20	0.05	1	0	0	1	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	25	20	0.05	1	0	0	1	0
................................................................................TTGAAGGAAT--------------TGATATATGCCC....................................................................................................	22	20	0.05	1	0	0	0	1
.................................................................................TGAAGGAAT--------------TGATATATGCAGA...................................................................................................	22	20	0.05	1	0	0	1	0
..................................................................................................................................TTTTAATTTCTTTCAATAAAAA................................................................	22	20	0.05	1	1	0	0	0
......................................................................................GAAT--------------TGATATATGCCAGTAAAATG............................................................................................	24	20	0.05	1	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	30	20	0.05	1	0	1	0	0
..................................................................AAATAA---ATTTATTGAAGGAAT--------------T...............................................................................................................	22	20	0.05	1	0	0	1	0
........................................................................................................................AATGGTGTATTTTTAATTTCTTTCAATA....................................................................	28	20	0.05	1	1	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCA.....................................................................................................	20	20	0.05	1	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCG.....................................................................................................	23	20	0.05	1	0	0	1	0
......................................................................................GAAT--------------TGATATATGCCAGTAAAATGGTGT........................................................................................	28	20	0.05	1	0	1	0	0
..........................................................................................................................TGGTGTATTTTTAATTTCTTTCAATAAA..................................................................	28	20	0.05	1	1	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATAA...................................................................	20	20	0.05	1	1	0	0	0
........................................................TTAGGTATAAAAATAA---ATTT.........................................................................................................................................	20	20	0.05	1	0	0	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATG....................................................................	23	20	0.05	1	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATGCC.......................................................................................................	21	20	0.05	1	0	0	0	1
................................................................................TTGAAGGAAT--------------TGATATATGCT.....................................................................................................	21	20	0.05	1	0	0	0	1
..................................................................................................................................TTTTAATTTCTTTCAATAA...................................................................	19	20	0.05	1	1	0	0	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAATTTCT...........................................................................	27	20	0.05	1	1	0	0	0
..................................................................AAATAA---ATTTATTGAAGG.................................................................................................................................	18	20	0.05	1	0	0	1	0

droYak3

ATATGAA-----------------------ACTAAGACATTTCGCAGCATTT-ATTTTAGGTATAAAAATAC---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAAAATAATTGACAAT---ATATAG-------AAATAAAT----T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	342.85	6857	12	1350	1830	1158	66	360	2080	1	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	242.90	4858	57	0	1426	2102	38	213	1020	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	92.60	1852	12	201	1293	208	2	29	99	0	0	3	5
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	26.45	529	29	183	0	162	11	0	142	1	0	1	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	26.30	526	0	206	97	115	24	83	0	1	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	20	22.70	454	1	60	123	140	3	15	112	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	20	18.40	368	0	124	71	61	3	8	101	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	20	14.60	292	0	59	206	23	1	3	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	20	14.40	288	5	148	22	22	8	28	54	0	0	1	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	20	12.80	256	13	45	77	22	9	36	54	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	20	9.35	187	3	57	61	63	3	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	20	8.25	165	0	133	32	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	20	7.60	152	0	139	11	2	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	20	6.60	132	0	88	17	0	0	2	25	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	20	5.10	102	0	43	11	0	5	20	23	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	20	3.60	72	12	25	24	6	0	5	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	20	3.40	68	0	8	7	0	0	1	52	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	2.70	54	0	48	4	2	0	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	19	20	2.65	53	0	18	27	5	1	0	2	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	20	2.45	49	0	4	2	2	0	0	41	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	20	2.35	47	2	0	18	17	0	0	10	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	20	2.30	46	0	44	2	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	20	2.30	46	0	25	11	3	0	1	6	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	20	2.25	45	0	17	12	6	0	0	10	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	20	2.20	44	0	5	33	0	0	1	5	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	20	1.80	36	0	10	0	7	2	1	16	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	20	1.80	36	0	36	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	20	1.70	34	1	0	9	21	0	0	3	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	20	1.65	33	0	7	0	1	0	3	21	0	0	1	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAA.................................................................	26	20	1.60	32	0	32	0	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	20	1.50	30	0	0	27	3	0	0	0	0	0	0	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	25	20	1.50	30	0	16	13	1	0	0	0	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	19	20	1.45	29	0	29	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	20	1.45	29	0	14	0	8	0	2	5	0	0	0	0
......................................ATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	23	20	1.40	28	0	5	2	0	0	0	21	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	21	20	1.35	27	0	11	15	0	0	0	1	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	20	1.35	27	0	24	0	2	0	0	1	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	25	20	1.35	27	0	0	1	0	0	0	26	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------T...............................................................................................................	20	20	1.30	26	3	0	1	2	0	1	19	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	20	1.25	25	1	10	0	1	0	2	11	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	20	1.20	24	0	7	9	2	0	0	6	0	0	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	20	1.20	24	0	4	4	2	0	0	14	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	20	1.10	22	3	0	2	3	2	12	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	20	1.10	22	0	10	6	5	0	0	1	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	20	1.05	21	0	6	12	0	0	0	3	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	20	20	1.00	20	0	10	0	1	0	1	8	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	20	0.90	18	0	0	0	8	1	0	9	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATAT........................................................................................................	19	20	0.90	18	0	12	0	1	0	1	4	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	22	20	0.85	17	0	16	1	0	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	20	0.80	16	0	2	1	1	0	1	11	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	20	0.80	16	0	15	0	1	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	20	0.80	16	0	0	5	2	1	5	3	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	20	0.75	15	0	1	9	0	0	0	5	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCAT......................................................................................................................................................................	21	20	0.70	14	0	3	0	0	0	0	11	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	24	20	0.70	14	0	0	0	0	0	0	14	0	0	0	0
..............................ACTAAGACATTTCGCAGCAT......................................................................................................................................................................	20	20	0.70	14	0	1	0	0	0	0	13	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	20	0.65	13	0	9	4	0	0	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	20	0.60	12	0	2	1	1	0	1	7	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	20	0.60	12	0	3	6	3	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	27	20	0.55	11	0	11	0	0	0	0	0	0	0	0	0
...................................GACATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	26	20	0.55	11	0	5	0	2	1	0	2	0	0	0	1
........................................TTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	21	20	0.55	11	0	4	0	1	0	0	6	0	0	0	0
.........................................................................................................GATATATGCCAGTAAAATG............................................................................................	19	20	0.50	10	0	10	0	0	0	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	20	0.50	10	0	4	5	0	0	1	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATGGTGTA.......................................................................................	27	20	0.50	10	0	7	3	0	0	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	20	0.50	10	1	3	0	0	0	1	5	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	20	0.50	10	0	6	0	0	0	3	1	0	0	0	0
.........................................................................................................................................................................................AAAT----T-------ATAAAACTCTAAGC.	19	18	0.50	9	0	5	4	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	20	0.50	10	1	0	8	0	0	1	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	20	0.50	10	0	4	0	0	0	1	5	0	0	0	0
................................TAAGACATTTCGCAGCATTT-ATTTTAGG...........................................................................................................................................................	28	19	0.47	9	0	9	0	0	0	0	0	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	20	20	0.45	9	0	5	4	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAT..................................................................	25	20	0.45	9	0	9	0	0	0	0	0	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGATATAT........................................................................................................	27	20	0.45	9	0	0	0	0	0	0	9	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATAT........................................................................................................	23	20	0.45	9	1	2	0	0	0	0	6	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	20	0.45	9	0	2	0	0	0	5	2	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	20	0.45	9	0	4	2	1	0	0	2	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	20	0.45	9	0	4	1	0	0	0	4	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	20	0.45	9	0	7	0	1	0	1	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAT...................................................................................................	23	20	0.40	8	0	2	2	0	0	1	3	0	0	0	0
.....................................CATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	24	20	0.40	8	0	1	0	0	0	0	7	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	20	0.40	8	0	7	0	1	0	0	0	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	27	20	0.40	8	0	8	0	0	0	0	0	0	0	0	0
.......................................TTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	22	20	0.40	8	0	4	0	0	0	0	4	0	0	0	0
..............................ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	19	20	0.35	7	0	5	0	0	0	1	1	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAA..................................................................	22	20	0.35	7	0	6	1	0	0	0	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAAA................................................................	27	20	0.35	7	0	7	0	0	0	0	0	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAAA.................................................................	25	20	0.35	7	0	7	0	0	0	0	0	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	25	20	0.35	7	0	5	1	0	1	0	0	0	0	0	0
...............................CTAAGACATTTCGCAGCATT.....................................................................................................................................................................	20	20	0.35	7	0	1	0	0	0	0	6	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	20	0.35	7	0	5	2	0	0	0	0	0	0	0	0
..............................ACTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	22	20	0.30	6	0	0	1	1	0	0	4	0	0	0	0
..............................ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	21	20	0.30	6	0	2	4	0	0	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	22	20	0.30	6	0	2	1	2	0	0	1	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAT..................................................................	24	20	0.30	6	0	5	1	0	0	0	0	0	0	0	0
...................................................................AATAC---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	26	20	0.30	6	0	0	0	0	0	0	6	0	0	0	0
..............................................................ATAAAAATAC---ATTTATTGAAGGAAT--------------T...............................................................................................................	26	20	0.30	6	0	0	1	0	0	0	5	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATA...........................................................................................................	19	20	0.30	6	1	1	0	1	0	0	3	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	25	20	0.30	6	0	3	0	0	0	0	3	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	20	0.30	6	0	5	0	1	0	0	0	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGAT............................................................................................................	23	20	0.30	6	0	1	1	0	0	0	4	0	0	0	0
..........................................CGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	19	20	0.30	6	0	0	0	1	0	0	5	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	20	0.30	6	0	5	0	1	0	0	0	0	0	0	0
..............................ACTAAGACATTTCGCAGC........................................................................................................................................................................	18	20	0.30	6	0	4	1	1	0	0	0	0	0	0	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	23	20	0.30	6	0	1	0	0	0	0	5	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	20	0.30	6	0	2	0	0	0	2	2	0	0	0	0
.................................................................................................................................TTTTTAATTTCTTTCAATAAA..................................................................	21	20	0.25	5	0	5	0	0	0	0	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	20	0.25	5	0	2	3	0	0	0	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	20	0.25	5	0	5	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	27	20	0.25	5	0	3	0	0	0	0	2	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	20	0.25	5	0	2	0	0	0	1	2	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATA...........................................................................................................	18	20	0.25	5	3	0	2	0	0	0	0	0	0	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	21	20	0.25	5	0	1	0	1	0	0	3	0	0	0	0
.........................................................................................T--------------TGATATATGCCAGTAAAATGGTGTA.......................................................................................	26	20	0.25	5	0	2	3	0	0	0	0	0	0	0	0
..........................................................AGGTATAAAAATAC---ATTTATTGAAGGAAT--------------................................................................................................................	29	20	0.25	5	0	0	0	0	0	0	1	0	0	0	4
......A-----------------------ACTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	23	20	0.25	5	0	1	0	2	0	0	2	0	0	0	0
...................................................................AATAC---ATTTATTGAAGGAAT--------------................................................................................................................	20	20	0.25	5	0	0	1	0	0	0	4	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAC...................................................................	24	20	0.25	5	0	5	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................ATAAAT----T-------ATAAAACTCTAAGC.	21	18	0.22	4	0	1	3	0	0	0	0	0	0	0	0
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	20	0.20	4	0	0	2	0	0	0	2	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAAT.................................................................	23	20	0.20	4	0	2	2	0	0	0	0	0	0	0	0
..................................................................................GAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	27	20	0.20	4	0	0	3	0	0	0	1	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	20	0.20	4	2	0	0	0	0	1	1	0	0	0	0
..............................................................ATAAAAATAC---ATTTATTGAAGGA................................................................................................................................	23	20	0.20	4	0	2	0	0	0	0	2	0	0	0	0
......................................ATTTCGCAGCATTT-ATTTTAGGTATAAAA....................................................................................................................................................	29	20	0.20	4	0	0	0	0	0	0	4	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	20	0.20	4	1	0	3	0	0	0	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
......................................................................AC---ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	28	20	0.20	4	0	2	2	0	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	21	20	0.20	4	0	1	1	1	0	0	1	0	0	0	0
ATATGAA-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	25	20	0.20	4	0	0	3	1	0	0	0	0	0	0	0
...........................................................................................................................GGTGTATTTTTAATTTCTTTCA.......................................................................	22	20	0.20	4	0	3	0	1	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAGCATTT-ATT................................................................................................................................................................	24	20	0.20	4	0	1	2	0	0	0	1	0	0	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	27	20	0.20	4	0	0	3	0	0	0	1	0	0	0	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------T...............................................................................................................	19	20	0.20	4	0	1	2	1	0	0	0	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCATTT-ATT................................................................................................................................................................	28	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	29	20	0.20	4	0	0	1	0	0	0	3	0	0	0	0
.........................................................................................................GATATATGCCAGTAAAATGGTGT........................................................................................	23	20	0.20	4	0	2	0	1	0	0	1	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCA.....................................................................................................	21	20	0.20	4	0	2	0	2	0	0	0	0	0	0	0
...................................................................................AAGGAAT--------------TGATATATGCC.....................................................................................................	18	20	0.20	4	0	0	4	0	0	0	0	0	0	0	0
......................................ATTTCGCAGCATTT-ATTTTAG............................................................................................................................................................	21	20	0.20	4	0	1	0	1	0	0	2	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	21	20	0.20	4	0	3	0	0	0	0	1	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TG..............................................................................................................	21	20	0.20	4	0	1	0	0	0	0	3	0	0	0	0
.........................................................................................................GATATATGCCAGTAAAATGGTG.........................................................................................	22	20	0.15	3	0	2	1	0	0	0	0	0	0	0	0
..............................................GCATTT-ATTTTAGGTATAAAA....................................................................................................................................................	21	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	24	20	0.15	3	1	0	0	0	0	1	1	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-ATTT...............................................................................................................................................................	27	20	0.15	3	0	1	0	1	0	0	1	0	0	0	0
...............................................................TAAAAATAC---ATTTATTGAAGGAAT--------------TGA.............................................................................................................	27	20	0.15	3	0	2	1	0	0	0	0	0	0	0	0
..............................ACTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	24	20	0.15	3	0	1	0	1	0	0	1	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	26	20	0.15	3	0	0	0	3	0	0	0	0	0	0	0
........................................................................................................TGATATATGCCAGTAAAATG............................................................................................	20	20	0.15	3	0	1	0	1	0	0	1	0	0	0	0
...............................CTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	23	20	0.15	3	0	1	0	0	0	0	2	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
...................................................................AATAC---ATTTATTGAAGGAAT--------------TGATATAT........................................................................................................	28	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
.........................................TCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	20	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	28	20	0.15	3	0	0	1	0	0	1	1	0	0	0	0
...TGAA-----------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	25	20	0.15	3	0	2	1	0	0	0	0	0	0	0	0
..........................................................................................................ATATATGCCAGTAAAATGGTGT........................................................................................	22	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATG.......................................................................................................	18	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	25	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	27	20	0.15	3	0	0	0	2	0	0	1	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAAAA..............................................................................................	28	20	0.15	3	0	1	1	0	0	0	1	0	0	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	25	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAATT..............................................................................	24	20	0.15	3	0	2	0	1	0	0	0	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	26	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATAT..........................................................................................................	18	20	0.15	3	1	0	0	0	0	2	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAAC.....................................................................	22	20	0.15	3	0	1	2	0	0	0	0	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCAT......................................................................................................................................................................	23	20	0.15	3	0	1	0	0	1	1	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-A..................................................................................................................................................................	24	20	0.15	3	0	0	0	1	0	0	2	0	0	0	0
.........................................................................................T--------------TGATATATGCCAGTAAAATGGTGT........................................................................................	25	20	0.15	3	0	2	0	0	0	0	1	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	24	20	0.15	3	0	2	0	0	0	0	1	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	20	0.15	3	0	0	1	0	1	0	1	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	24	20	0.15	3	0	2	0	1	0	0	0	0	0	0	0
.....AA-----------------------ACTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
..............................................................ATAAAAATAC---ATTTATTGAAGGAAT--------------TGAT............................................................................................................	29	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	24	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
.........................................................................................T--------------TGATATATGCCAGTAAAATGGTGTAT......................................................................................	27	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
...............................CTAAGACATTTCGCAGCAT......................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	1	1	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGC..................................................................................................	26	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------................................................................................................................	19	20	0.10	2	0	1	0	0	0	0	1	0	0	0	0
ATATGAA-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAAT.....................................................................	19	20	0.10	2	0	1	0	1	0	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGAT............................................................................................................	19	20	0.10	2	0	1	0	0	0	0	1	0	0	0	0
......................................ATTTCGCAGCATTT-ATTTTA.............................................................................................................................................................	20	20	0.10	2	0	1	0	0	0	1	0	0	0	0	0

droEre2

ATATGAA-----------------------ACTAAGACATTTCGCAGCATTT-ATTTTAGGTATAAAAATAC---ATTTATTGAAGGAAT--------------TGATATATGCCAGTAAAATGGTGTATTTTTAATTTCTTTCAATAAAAACAAAATTGACATT---ATATAA-------AAATGAAT----T-------ATAAAACTCTAAGCG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............................................................................TATTGAAGGAAT--------------TGATATATGC......................................................................................................	22	20	330.95	6619	992	248	0	761	0	4618	0
..............................................................................TATTGAAGGAAT--------------TGATATATG.......................................................................................................	21	20	139.40	2788	0	0	134	245	2409	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCA....................................................................................................	22	20	62.85	1257	235	0	44	102	0	876	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	23	20	58.60	1172	390	253	43	0	486	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCC.....................................................................................................	21	20	30.15	603	184	0	34	0	385	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATG.......................................................................................................	22	20	29.70	594	46	7	0	0	210	331	0
..............................................................................TATTGAAGGAAT--------------TGATATAT........................................................................................................	20	20	14.25	285	117	5	0	4	88	71	0
................................................................................TTGAAGGAAT--------------TGATATATGC......................................................................................................	20	20	12.90	258	0	13	10	0	0	235	0
...............................................................................ATTGAAGGAAT--------------TGATATATGC......................................................................................................	21	20	10.45	209	85	0	0	56	68	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	22	20	8.00	160	48	40	6	0	0	66	0
...............................................................................ATTGAAGGAAT--------------TGATATATG.......................................................................................................	20	20	7.05	141	63	0	0	0	43	35	0
.................................................................................TGAAGGAAT--------------TGATATATGCCA....................................................................................................	21	20	6.15	123	43	0	6	0	74	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGC......................................................................................................	23	20	5.90	118	43	19	5	51	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATG.......................................................................................................	19	20	5.85	117	0	1	0	0	64	52	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	24	20	4.00	80	0	2	0	4	36	35	3
.............................................................................................................................TGTATTTTTAATTTCTTTCAAT.....................................................................	22	20	3.95	79	68	3	0	0	0	8	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATA....................................................................	23	20	3.95	79	67	10	0	1	0	0	1
..............................................................................TATTGAAGGAAT--------------TGATATA.........................................................................................................	19	20	3.65	73	0	0	1	1	47	24	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	23	20	2.85	57	20	2	1	11	0	23	0
......A-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	19	20	2.40	48	0	31	0	0	2	15	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	24	20	2.40	48	9	0	0	0	15	24	0
.............................................................................TTATTGAAGGAAT--------------TGATATAT........................................................................................................	21	20	2.30	46	22	2	1	0	21	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	24	20	2.25	45	14	17	0	3	7	4	0
.............................................................................TTATTGAAGGAAT--------------TGATATA.........................................................................................................	20	20	2.15	43	15	0	0	3	0	25	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	25	20	2.15	43	38	0	0	0	5	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	25	20	1.85	37	5	3	0	3	7	19	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	24	20	1.80	36	0	0	1	4	31	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGA......................................................................................................	22	20	1.75	35	7	0	2	0	5	21	0
..............................................................................TATTGAAGGAAT--------------TGATATATT.......................................................................................................	21	20	1.50	30	10	1	2	0	0	17	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	25	20	1.45	29	2	1	0	1	6	19	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	26	20	1.40	28	0	0	0	0	12	11	5
..............................................................................TATTGAAGGAAT--------------TGATATATGT......................................................................................................	22	20	1.35	27	0	0	0	4	0	23	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAG...................................................................................................	26	20	1.35	27	22	0	0	0	0	1	4
.................................................................................TGAAGGAAT--------------TGATATATGCC.....................................................................................................	20	20	1.35	27	0	8	1	0	0	18	0
..............................................................................................................................GTATTTTTAATTTCTTTCAAT.....................................................................	21	20	1.30	26	24	0	1	0	0	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATA....................................................................	22	20	1.30	26	26	0	0	0	0	0	0
......................................ATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	23	20	1.20	24	2	0	0	0	3	19	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	23	20	1.20	24	1	0	2	1	9	11	0
........................................................................................................TGATATATGCCAGTAAAATGGTGTA.......................................................................................	25	20	0.95	19	0	0	0	2	0	0	17
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	26	20	0.95	19	1	3	0	0	8	7	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAA...................................................................	24	20	0.85	17	16	1	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	23	20	0.80	16	4	1	1	0	8	2	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAA......................................................................	21	20	0.80	16	15	1	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGC......................................................................................................	19	20	0.75	15	4	3	0	0	0	8	0
...........................................................................ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	21	20	0.75	15	0	0	0	0	6	9	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	25	20	0.70	14	13	0	0	1	0	0	0
..........................................CGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	19	20	0.70	14	0	0	0	11	0	3	0
...................................GACATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	26	20	0.65	13	0	3	0	0	2	8	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	26	20	0.65	13	3	0	0	0	0	10	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAG...................................................................................................	22	20	0.60	12	0	0	0	0	12	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATATATGC......................................................................................................	26	20	0.60	12	2	3	0	0	1	6	0
............................................................................TTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	23	20	0.60	12	1	0	0	0	5	6	0
..ATGAA-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	23	20	0.60	12	3	9	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATA.........................................................................................................	22	20	0.55	11	2	1	0	0	7	1	0
.................................AAGACATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	28	20	0.55	11	0	2	0	0	0	0	9
......A-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	20	20	0.55	11	3	1	0	2	1	4	0
...........................................................................ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	20	20	0.55	11	0	0	0	1	10	0	0
.............................................................................TTATTGAAGGAAT--------------TGATAT..........................................................................................................	19	20	0.55	11	0	0	0	0	3	8	0
.....................................CATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	24	20	0.50	10	2	3	0	1	0	4	0
..................................................................................GAAGGAAT--------------TGATATATGC......................................................................................................	18	20	0.50	10	0	4	0	0	0	6	0
..................................................................................GAAGGAAT--------------TGATATATGCC.....................................................................................................	19	20	0.45	9	1	3	0	4	1	0	0
......................................................................AC---ATTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	31	20	0.45	9	0	0	0	0	0	0	9
...........................................................................ATTTATTGAAGGAAT--------------TGAT............................................................................................................	19	20	0.40	8	0	0	0	2	6	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	26	20	0.40	8	0	0	0	0	2	1	5
.....AA-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	20	20	0.40	8	1	0	0	5	0	2	0
.............................................................................TTATTGAAGGAAT--------------TGATA...........................................................................................................	18	20	0.40	8	1	0	0	0	0	7	0
......................................ATTTCGCAGCATTT-ATTTTAG............................................................................................................................................................	21	20	0.40	8	0	0	0	4	0	4	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATG.......................................................................................................	24	20	0.40	8	1	1	0	0	0	6	0
..............................................................................TATTGAAGGAAT--------------TGATATG.........................................................................................................	19	20	0.40	8	0	0	0	0	4	4	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAAA..................................................................	24	20	0.35	7	6	0	0	0	0	1	0
......................................ATTTCGCAGCATTT-ATTTTA.............................................................................................................................................................	20	20	0.35	7	1	0	0	5	0	1	0
..............................................................................................................................GTATTTTTAATTTCTTTCAATAA...................................................................	23	20	0.35	7	7	0	0	0	0	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAAA..................................................................	23	20	0.35	7	7	0	0	0	0	0	0
......................................ATTTCGCAGCATTT-ATTTTAGGTAT........................................................................................................................................................	25	20	0.35	7	0	0	0	1	1	0	5
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	25	20	0.35	7	0	0	1	2	1	3	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------T...............................................................................................................	20	20	0.35	7	0	4	0	0	3	0	0
....GAA-----------------------ACTAAGACATTTCGCAGC........................................................................................................................................................................	21	20	0.30	6	5	0	0	1	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATG.......................................................................................................	18	20	0.30	6	3	0	0	0	3	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	24	20	0.30	6	0	0	0	1	5	0	0
..............................................................................................................................GTATTTTTAATTTCTTTCAA......................................................................	20	20	0.30	6	6	0	0	0	0	0	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATAT........................................................................................................	23	20	0.30	6	3	0	0	0	3	0	0
....GAA-----------------------ACTAAGACATTTCGCA..........................................................................................................................................................................	19	20	0.30	6	6	0	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATAT..........................................................................................................	20	20	0.30	6	1	0	0	0	5	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	23	20	0.30	6	5	1	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATGC........................................................................................................	20	20	0.30	6	0	1	0	0	5	0	0
..............................................................ATAAAAATAC---ATTTATTGAAGGA................................................................................................................................	23	20	0.30	6	0	5	0	0	0	1	0
...............................CTAAGACATTTCGCAGCATTT-ATT................................................................................................................................................................	24	20	0.30	6	0	3	0	2	0	1	0
...................................GACATTTCGCAGCATTT-ATT................................................................................................................................................................	20	20	0.30	6	0	0	0	3	1	2	0
...............................................................................................................................TATTTTTAATTTCTTTCAATA....................................................................	21	20	0.30	6	5	1	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	25	20	0.30	6	0	0	0	0	0	0	6
................................................................................................................................ATTTTTAATTTCTTTCAATA....................................................................	20	20	0.30	6	4	0	0	0	0	2	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-A..................................................................................................................................................................	24	20	0.25	5	2	0	0	1	0	2	0
..............................ACTAAGACATTTCGCAGC........................................................................................................................................................................	18	20	0.25	5	0	1	0	0	0	4	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGT......................................................................................................	23	20	0.25	5	0	0	1	0	1	3	0
..............................................................................TATTGAAGGAAT--------------TGATATATA.......................................................................................................	21	20	0.25	5	0	0	0	1	2	2	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAA..................................................................	25	20	0.25	5	0	2	0	0	0	3	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCCA....................................................................................................	27	20	0.25	5	0	1	0	0	4	0	0
................................................................................................................................ATTTTTAATTTCTTTCAAT.....................................................................	19	20	0.25	5	0	1	0	0	0	4	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCCT....................................................................................................	23	20	0.25	5	0	0	0	0	0	5	0
....GAA-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	22	20	0.25	5	3	2	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGT......................................................................................................	20	20	0.20	4	0	0	0	0	4	0	0
...............................................................................ATTGAAGGAAT--------------TGATATA.........................................................................................................	18	20	0.20	4	2	0	0	1	0	1	0
......................................ATTTCGCAGCATTT-ATTTT..............................................................................................................................................................	19	20	0.20	4	0	0	0	0	0	4	0
.............................................................................................................................TGTATTTTTAATTTCTTTCA.......................................................................	20	20	0.20	4	4	0	0	0	0	0	0
.TATGAA-----------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	27	20	0.20	4	4	0	0	0	0	0	0
........................................TTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	21	20	0.20	4	1	3	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCAT......................................................................................................................................................................	21	20	0.20	4	2	2	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	27	20	0.20	4	2	0	0	0	2	0	0
...............................................................................................................................TATTTTTAATTTCTTTCAAT.....................................................................	20	20	0.20	4	4	0	0	0	0	0	0
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	25	20	0.20	4	3	0	0	1	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAC..................................................................	25	20	0.20	4	4	0	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-ATT................................................................................................................................................................	26	20	0.20	4	0	1	0	3	0	0	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TG..............................................................................................................	21	20	0.20	4	0	0	1	0	2	1	0
......................................................................AC---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	23	20	0.20	4	1	0	0	0	1	2	0
..............................ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	21	20	0.20	4	1	0	0	1	0	2	0
.................................................................................................................................................ATAAAAACAAAATTGACATT---................................................	20	20	0.20	4	0	4	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	23	20	0.20	4	0	2	0	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCTT...................................................................................................	25	20	0.20	4	1	0	0	0	1	1	1
..............................................................ATAAAAATAC---ATTTATTGAAG..................................................................................................................................	21	20	0.20	4	1	3	0	0	0	0	0
........................................................................................................TGATATATGCCAGTAAAATG............................................................................................	20	20	0.20	4	0	0	0	2	0	2	0
........................................................................................AT--------------TGATATATGCCAGTAAAATG............................................................................................	22	20	0.20	4	3	0	0	0	0	1	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	25	20	0.15	3	0	1	0	0	0	2	0
............................................................................TTTATTGAAGGAAT--------------TGATATAT........................................................................................................	22	20	0.15	3	1	0	0	0	1	1	0
.....AA-----------------------ACTAAGACATTTCGCAGCA.......................................................................................................................................................................	21	20	0.15	3	1	1	0	0	0	1	0
................................TAAGACATTTCGCAGCATTT-ATTTTAGGT..........................................................................................................................................................	29	20	0.15	3	0	0	0	0	0	0	3
.................................................................................TGAAGGAAT--------------TGATATATGCCAGTAAA...............................................................................................	26	20	0.15	3	0	0	0	0	0	3	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATAAAAAA...............................................................	28	20	0.15	3	2	0	0	0	0	0	1
....GAA-----------------------ACTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	25	20	0.15	3	0	1	0	2	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	26	20	0.15	3	0	0	0	0	2	1	0
..................................................................................GAAGGAAT--------------TGATATATGCCAGTAAAAT.............................................................................................	27	20	0.15	3	0	0	0	0	0	3	0
..............................................................ATAAAAATAC---ATTTATTGAAGGAAT--------------T...............................................................................................................	26	20	0.15	3	2	1	0	0	0	0	0
............................................................................TTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	25	20	0.15	3	2	0	0	0	1	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATATATGCC.....................................................................................................	27	20	0.15	3	0	0	0	0	0	3	0
...........................................................................ATTTATTGAAGGAAT--------------TGA.............................................................................................................	18	20	0.15	3	0	0	0	0	0	3	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCCAGTA.................................................................................................	28	20	0.15	3	0	0	0	0	3	0	0
....GAA-----------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	24	20	0.15	3	0	2	0	0	0	1	0
.........................................................................................................GATATATGCCAGTAAAATG............................................................................................	19	20	0.15	3	3	0	0	0	0	0	0
............................................................................................................................GTGTATTTTTAATTTCTTTCAAT.....................................................................	23	20	0.15	3	1	0	0	0	0	2	0
.....................................................................TAC---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	23	20	0.15	3	1	0	1	0	0	1	0
..............................................................ATAAAAATAC---ATTTATTGAAGGAAT--------------................................................................................................................	25	20	0.15	3	0	3	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCTT...................................................................................................	23	20	0.15	3	0	0	0	0	1	2	0
............................................................................TTTATTGAAGGAAT--------------TGATATA.........................................................................................................	21	20	0.15	3	0	0	0	0	0	3	0
..................................................................................................................CAGTAAAATGGTGTATTTTTAAT...............................................................................	23	20	0.15	3	1	0	0	1	0	1	0
..............................ACTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	24	20	0.15	3	0	0	0	0	0	3	0
...............................CTAAGACATTTCGCAGCAT......................................................................................................................................................................	19	20	0.15	3	0	0	0	2	0	1	0
......................................................................................................................................................................................AATGAAT----T-------ATAAAACTCTAAGC.	22	20	0.15	3	0	3	0	0	0	0	0
.............................................................................................................................TGTATTTTTAATTTCTTTCAATT....................................................................	23	20	0.15	3	3	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAGTAA................................................................................................	28	20	0.15	3	0	0	0	0	3	0	0
...............................CTAAGACATTTCGCAGCATTT-AT.................................................................................................................................................................	23	20	0.15	3	0	0	1	1	0	1	0
..............................ACTAAGACATTTCGCAGCATTT-ATTTT..............................................................................................................................................................	27	20	0.15	3	1	0	0	0	0	2	0
..................................................................................................................CAGTAAAATGGTGTATTTTT..................................................................................	20	20	0.15	3	0	0	0	2	0	1	0
..............................ACTAAGACATTTCGCAGCATTT-ATTTTA.............................................................................................................................................................	28	20	0.15	3	2	0	0	0	0	1	0
..................................................................................GAAGGAAT--------------TGATATATGCCA....................................................................................................	20	20	0.15	3	2	0	0	0	1	0	0
...............................CTAAGACATTTCGCAGCA.......................................................................................................................................................................	18	20	0.15	3	1	0	0	0	0	2	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	25	20	0.15	3	3	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCG.....................................................................................................	23	20	0.15	3	0	0	0	0	0	3	0
....................................................................ATAC---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	24	20	0.15	3	0	0	0	0	3	0	0
......A-----------------------ACTAAGACATTTCGCAG.........................................................................................................................................................................	18	20	0.15	3	0	3	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGCT.....................................................................................................	24	20	0.15	3	0	0	0	0	0	0	3
.........................................................................................................GATATATGCCAGTAAAATGGTGTA.......................................................................................	24	20	0.15	3	1	2	0	0	0	0	0
...............................................................................ATTGAAGGAAT--------------TGATATATGCA.....................................................................................................	22	20	0.15	3	3	0	0	0	0	0	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCCC....................................................................................................	24	20	0.15	3	0	2	0	1	0	0	0
..........................................................................................................ATATATGCCAGTAAAATG............................................................................................	18	20	0.15	3	0	0	0	3	0	0	0
......................................ATTTCGCAGCATTT-ATTTTAGGC..........................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0
...............................CTAAGACATTTCGCAGCATTT-...................................................................................................................................................................	21	20	0.10	2	0	1	0	0	0	1	0
......A-----------------------ACTAAGACATTTCGCAGCATTT-ATTT...............................................................................................................................................................	27	20	0.10	2	0	0	0	1	1	0	0
............................................................................TTTATTGAAGGAAT--------------TGAT............................................................................................................	18	20	0.10	2	0	0	0	0	0	2	0
...............................................................................................................................TATTTTTAATTTCTTTCAATAA...................................................................	22	20	0.10	2	1	0	0	0	0	1	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATG.........................................................................................................	22	20	0.10	2	0	0	0	0	2	0	0
.......................................................................C---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	22	20	0.10	2	0	0	0	1	0	1	0
..........................................................................................................................TGGTGTATTTTTAATTTCTTTCAATAAT..................................................................	28	20	0.10	2	0	0	0	0	0	0	2
...........................................................................................................................GGTGTATTTTTAATTTCTTTCAATAAA..................................................................	27	20	0.10	2	0	1	0	0	0	1	0
................................................................................TTGAAGGAAT--------------TGATATATGCCAA...................................................................................................	23	20	0.10	2	2	0	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAAAA.................................................................	23	20	0.10	2	1	1	0	0	0	0	0
................................................................................TTGAAGGAAT--------------TGATATATGCCT....................................................................................................	22	20	0.10	2	0	2	0	0	0	0	0
......A-----------------------ACTAAGACATTTCGCAGCATT.....................................................................................................................................................................	22	20	0.10	2	1	0	0	0	0	1	0
................................................................AAAAATAC---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	28	20	0.10	2	0	2	0	0	0	0	0
................................................................................................................................ATTTTTAATTTCTTTCAATAA...................................................................	21	20	0.10	2	2	0	0	0	0	0	0
.............................................................................TTATTGAAGGAAT--------------TGATATATGG......................................................................................................	23	20	0.10	2	0	0	0	0	0	2	0
...........................................................................ATTTATTGAAGGAAT--------------TGATATATGCCAGT..................................................................................................	29	20	0.10	2	0	0	0	0	0	0	2
...................................................................AATAC---ATTTATTGAAGGAAT--------------TGATA...........................................................................................................	25	20	0.10	2	1	0	0	0	0	1	0
..............................................................................TATTGAAGGAAT--------------TGATATATGCAT....................................................................................................	24	20	0.10	2	0	0	0	0	0	0	2
...................................................................AATAC---ATTTATTGAAGGAAT--------------TGATAT..........................................................................................................	26	20	0.10	2	0	1	1	0	0	0	0
......................................................................AC---ATTTATTGAAGGAAT--------------TG..............................................................................................................	19	20	0.10	2	1	1	0	0	0	0	0

dps_2

Unknown_group_377:318-374 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-21.8	-21.8	-21.6