ID:

dps_1984

 Coordinate:

Unknown_group_35:18261-18411 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.6 -13.2 -13.2 -13.0

Flybase annnotation

exon [dpse_GLEANR_9715:3]; CDS [Dpse\GA29167-cds]; intron [Dpse\GA29167-in]

Repeatable elements

NameClassFamilyStrand
DIVER_I-intLTRPao+
mature
  1. dps_1984  Unknown_group_35:18338-18360 +
  2. Unknown_group_135:17609-17631 -
  3. Unknown_group_135:21194-21216 +
star
  1. dps_1984  Unknown_group_35:18288-18311 +
  2. Unknown_singleton_2077:492-515 -
  3. Unknown_singleton_2077:6343-6366 -
  4. Unknown_singleton_2077:12867-12890 -
  5. Unknown_singleton_2077:18267-18290 -
  6. Unknown_singleton_2077:24791-24814 -
  7. Unknown_singleton_2077:31317-31340 -
  8. Unknown_group_231:20774-20797 -
  9. Unknown_group_167:4775-4798 +
  10. Unknown_group_167:10912-10935 +
  11. Unknown_group_167:17399-17422 +
  12. Unknown_group_135:17658-17681 -
  13. Unknown_group_135:21144-21167 +
  14. Unknown_group_771:1477-1500 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CATGCTGTCACCATTAGATGTCACCACAACAGGCTAGAGTATCTCGTCCAGAAATTTTTCGAAATGGAGCATCTCGGTTCTGCAAAACAGCTCACACCAGAAGAGGGATGGTGCGAGGAGCATTTTAAACGAACTCACATCCGTCAACGGAACGGCAAGTATTTGGTACGGTTACTTAAGCGTTTGTTTGACCCTTCGCAGGTGCTAGGCAAATCACGTCAAATCGCAATTAATCGATTCCAAATGCTTCA
*****************************************************************************..(((........................(((((((.(((................))).)).)))))..)))***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M059
embryo
 GSM444067
head
 M022
male body		 M062
head
...............................................................................................................................AACGAACTCACATCCGTCAACGG..................................................................................................... 23 0 3 1.67 5 5 0 0 0 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACCAGA...................................................................................................................................................... 24 0 14 1.64 23 20 2 0 0 0 0 0 1
.............................................................................TTCTGCAAAACAGCTCACACCAG....................................................................................................................................................... 23 0 14 1.43 20 18 2 0 0 0 0 0 0
.............TTAGATGTCACCACAACAGGCTAGA..................................................................................................................................................................................................................... 25 0 11 1.27 14 14 0 0 0 0 0 0 0
.............TTAGATGTCACCACAACAGGCTAG...................................................................................................................................................................................................................... 24 0 11 1.18 13 8 3 2 0 0 0 0 0
.............TTAGATGTCACCACAACAGGCTAGAG.................................................................................................................................................................................................................... 26 0 11 1.09 12 8 3 0 1 0 0 0 0
.............TTAGATGTCACCACAACAGGCTA....................................................................................................................................................................................................................... 23 0 13 1.08 14 14 0 0 0 0 0 0 0
...............................................................................................................................AACGAACTCACATCCGTCAACGGAAC.................................................................................................. 26 0 3 1.00 3 3 0 0 0 0 0 0 0
.............TTAGATGTCACCACAACAGGCT........................................................................................................................................................................................................................ 22 0 13 0.92 12 9 0 0 2 1 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACCAGAAG.................................................................................................................................................... 26 0 13 0.92 12 10 1 1 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTGTTTGACCCTTC...................................................... 24 0 14 0.86 12 9 2 0 0 0 1 0 0
........................................................................................AGCTCACACCAGTGGAGG................................................................................................................................................. 18 2 7 0.86 6 0 6 0 0 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACCA........................................................................................................................................................ 22 0 14 0.86 12 10 2 0 0 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTCG..................................................... 23 0 14 0.79 11 8 0 0 1 0 2 0 0
................................................................................................................................ACGAACTCACATCCGTCAACGG..................................................................................................... 22 0 3 0.67 2 2 0 0 0 0 0 0 0
...............................................................................................................................................TCAACGGAACGGCAAGTATTTGG..................................................................................... 23 0 5 0.60 3 0 0 3 0 0 0 0 0
.............TTAGATGTCACCACAACAGGC......................................................................................................................................................................................................................... 21 0 13 0.46 6 5 0 0 0 1 0 0 0
.............................................................AAATGGAGCATCTCGGTTCTGCAAA..................................................................................................................................................................... 25 0 11 0.45 5 0 5 0 0 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACC......................................................................................................................................................... 21 0 14 0.36 5 3 0 0 0 2 0 0 0
...............................................................................................................................AACGAACTCACATCCGTCAACGGA.................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................AACGAACTCACATCCGTCAACGGAA................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................................TAAACGAACTCACATCCGTCAACGG..................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0
......................................................................................................................................TCACATCCGTCAACGGAACGGCA.............................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................................................AACTCACATCCGTCAACGGAACGGCAA............................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCACGTCAAATCGCAATTAATCG............... 23 0 4 0.25 1 0 0 0 0 1 0 0 0
................................................................................................................................................................................TAAGCGTTTGTTTGACCCTTCG..................................................... 22 0 14 0.21 3 3 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTGTTTGACCCTTCG..................................................... 25 0 14 0.21 3 2 0 0 1 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTCGC.................................................... 24 0 14 0.21 3 2 0 0 1 0 0 0 0
....................................................................................................................................................GGAACGGCAAGTATTTGGTACGG................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0 0 0
................................................................................................................................................CAACGGAACGGCAAGTATTTGG..................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0
..............................................................................TCTGCAAAACAGCTCACACCAG....................................................................................................................................................... 22 0 15 0.20 3 3 0 0 0 0 0 0 0
................................................................TGGAGCATCTCGGTTCTGTAAAACAGC................................................................................................................................................................ 27 1 11 0.18 2 0 2 0 0 0 0 0 0
..............TAGATGTCACCACAACAGGCTAGA..................................................................................................................................................................................................................... 24 0 11 0.18 2 2 0 0 0 0 0 0 0
..............TAGATGTCACCACAACAGGCTAGAG.................................................................................................................................................................................................................... 25 0 11 0.18 2 2 0 0 0 0 0 0 0
..........................................................................................................................TTTTAAACGAACTCACATCCGTCAACG...................................................................................................... 27 0 12 0.17 2 0 2 0 0 0 0 0 0
...............................................................................................................................AACGAACTCACATCCGTCAACG...................................................................................................... 22 0 12 0.17 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTCGCAGG................................................. 27 0 13 0.15 2 2 0 0 0 0 0 0 0
.............................................................................TTCTGCAAGACAGCTCACACCAGA...................................................................................................................................................... 24 1 14 0.14 2 2 0 0 0 0 0 0 0
............................................................................................................TGGTGCGAGGAGCATTTTAAACGAAC..................................................................................................................... 26 0 7 0.14 1 0 0 0 1 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACCAGAA..................................................................................................................................................... 25 0 14 0.14 2 2 0 0 0 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACAC.......................................................................................................................................................... 20 0 14 0.14 2 2 0 0 0 0 0 0 0
.............................................................AAATGGAGCATCTCGGTTCTGTAAA..................................................................................................................................................................... 25 1 11 0.09 1 1 0 0 0 0 0 0 0
..........................................................TCGAAATGGAGCATCTCGG.............................................................................................................................................................................. 19 0 11 0.09 1 1 0 0 0 0 0 0 0
...........CATTAGATGTCACCACAACAGGC......................................................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................TTCGAAATGGAGCATCTCGG.............................................................................................................................................................................. 20 0 11 0.09 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGCTAGGCAAATCACGTCAAATCGC........................ 25 0 11 0.09 1 1 0 0 0 0 0 0 0
.................ATGTCACCACAACAGGCTAGA..................................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0 0
.............................................................ATCTGGAGCATCTCGGTTCCG......................................................................................................................................................................... 21 3 11 0.09 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGCTAGGCAAATCACGTCAAATTGC........................ 25 1 11 0.09 1 0 0 0 1 0 0 0 0
.....TGTCACCATTAGATGTCACCA................................................................................................................................................................................................................................. 21 0 12 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTCGCAGGTGCTAGGCAAA...................................... 20 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................ACGAACTCACATCCGTCAACG...................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGCTAGGCAAATCACGTCAAATCGC........................ 26 1 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................TTTTAAACGAACTCACATCCGTCA......................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................CTCGGTTCTGCAAAACAGCTC.............................................................................................................................................................. 21 0 13 0.08 1 0 0 0 0 0 0 1 0
..........................................................................................................................TTTTAAACGAACTCACATCCGTC.......................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTGTTTGACCCTTCGCAGGTGC.............................................. 22 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................CATCTCGGTTCTGCAAAACAG................................................................................................................................................................. 21 0 13 0.08 1 0 0 1 0 0 0 0 0
..............TAGATGTCACCACAACAGGCTA....................................................................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0 0
...............AGATGTCACCACAACAGGCTA....................................................................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................TTCTGCAAGACAGCTCACACCAGAAG.................................................................................................................................................... 26 1 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACCAGAAGA................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
..............TAGATGTCACCACAACAGGCT........................................................................................................................................................................................................................ 21 0 13 0.08 1 1 0 0 0 0 0 0 0
............................................................................GTTCTGCAAAACAGCTCACACCAGAAG.................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................AACGAACTCACATCCGTCAAC....................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................GACCCTTCGCAGGTGCTAGGT......................................... 21 1 13 0.08 1 1 0 0 0 0 0 0 0
.............TTAGATGTCACCACAACAGG.......................................................................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................TCGGTTCTGTAAAACAGCTCACACCAGA...................................................................................................................................................... 28 1 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTATTTGACCCTTCG..................................................... 23 1 14 0.07 1 1 0 0 0 0 0 0 0
............................................................CATCTGGAGCATCTCGGTTC........................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................TAAGCGTTTGTTTGACCCTTC...................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTC...................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTATTTGACCCTTCG..................................................... 25 1 14 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................TAAGCGTTTATTTGACCCTTCG..................................................... 22 1 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................TTCTGTAAAACAGCTCACACCAG....................................................................................................................................................... 23 1 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................TTCTGCAAAACAGCTCACACCAT....................................................................................................................................................... 23 1 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................TTCTGTAAAACAGCTCACACCAGAA..................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTATTTGACCCTT....................................................... 23 1 14 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CTTAAGCGTTTGTTTGACCCTTCG..................................................... 24 0 14 0.07 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTATTTGACCCTTCGC.................................................... 24 1 14 0.07 1 1 0 0 0 0 0 0 0
..........................................................................CGGTTCTGTAAAACAGCTCA............................................................................................................................................................. 20 1 14 0.07 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................TTAAGCGTTTATTTGACCCTGCGC.................................................... 24 2 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTGTTTGACCCT........................................................ 22 0 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTGTTTGACCCTT....................................................... 23 0 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTGTTTGACCCTTCGCAG.................................................. 28 0 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTAAGCGTTTATTTGACCCTTC...................................................... 24 1 14 0.07 1 1 0 0 0 0 0 0 0
..............................................................................TCTGTAAAACAGCTCACACCAGA...................................................................................................................................................... 23 1 15 0.07 1 1 0 0 0 0 0 0 0
..............................................................................TCTGCAAAACAGCTCACACCAGA...................................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0 0 0
..........................................................................................................................TTTTAAACGAACTCACATCC............................................................................................................. 20 0 15 0.07 1 0 1 0 0 0 0 0 0
....................................GAGGATCTCGTGCAGAAA..................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTACGACAGTGGTAATCTACAGTGGTGTTGTCCGATCTCATAGAGCAGGTCTTTAAAAAGCTTTACCTCGTAGAGCCAAGACGTTTTGTCGAGTGTGGTCTTCTCCCTACCACGCTCCTCGTAAAATTTGCTTGAGTGTAGGCAGTTGCCTTGCCGTTCATAAACCATGCCAATGAATTCGCAAACAAACTGGGAAGCGTCCACGATCCGTTTAGTGCAGTTTAGCGTTAATTAGCTAAGGTTTACGAAGT
*****************************************************************************************************..(((........................(((((((.(((................))).)).)))))..)))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 M059
embryo
 M062
head
 M022
male body
GTACGACAGTGGTAATCTACAGT.................................................................................................................................................................................................................................... 23 0 1 8.00 8 7 1 0 0 0 0 0 0
.............................................................TTTACCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 26 0 11 2.36 26 14 6 4 2 0 0 0 0
...............................................................TACCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 24 0 11 2.27 25 20 1 4 0 0 0 0 0
..............................................................TTACCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 25 0 11 2.18 24 13 5 4 2 0 0 0 0
.............................GTCCGATCTCATAGAGCAGGTCTT...................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................CTCATAGAGCAGGTCTTTAAAAAGCTT............................................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0
..............................................................................................................CACGCTCCTCGTAAAATTTGCTTGAGT.................................................................................................................. 27 0 7 1.71 12 12 0 0 0 0 0 0 0
................................................................ACCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 23 0 11 1.36 15 13 2 0 0 0 0 0 0
............................................................CTTTACCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 27 0 11 1.27 14 12 0 1 1 0 0 0 0
..........................GTTGTCCGATCTCATAGAGCAGGTCTT...................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................ATTGTCCGATCTCATAGAGCAGGTCTT...................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................................AGAGCAGGTCTTTAAAAAGCTTTACCT....................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................CCGATCTCATAGAGCAGGTCTTTAAA.................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................GTTGTCCGATCTCATAGAGCAGGTCT....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................ATAAACCATGCCAATGAATTCGCA.................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................CCGATCTCATAGAGCAGGTCTTT..................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
............................TGTCCGATCTCATAGAGCAGGTCT....................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................CCGATCTCATAGAGCAGGT......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................GTTGTCCGATCTCATAGAGCAGGTC........................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................TGTCGAGTGTGGTCTTCTCCCT............................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................TCATAGAGCAGGTCTTTAAAAAGCT............................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................CCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 22 0 12 0.83 10 9 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GCAGTTTAGCGTTAATTAGCTAAGGT......... 26 0 4 0.75 3 2 0 1 0 0 0 0 0
...............................................................................................................................TTGCTTGAGTGTAGGCAGTTGCCT.................................................................................................... 24 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................................................CGTAGAGCCAAGACGTTTTGTCGAGT............................................................................................................................................................. 26 0 13 0.62 8 1 1 5 0 0 1 0 0
.............................................................................................................................................................................................................................TTAGCGTCAATTAGCTAAGGTTTA...... 24 1 2 0.50 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................GCAGTTTAGCGTCAATTAGCTAAGGT......... 26 1 4 0.50 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTAGCGTTAATTAGCTAAGGTTTA...... 24 0 2 0.50 1 0 0 0 1 0 0 0 0
.........................................................................................................................................GTAGGCAGTTGCCTTGCCGTTCA........................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGTTTAGTGCAGTTTAGCGTT...................... 21 0 2 0.50 1 0 0 0 1 0 0 0 0
...................................................................................................................................TTGAGTGTAGGCAGTTGCCTTGCCGT.............................................................................................. 26 0 4 0.50 2 2 0 0 0 0 0 0 0
............................................................................CAAGACGTTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 26 0 14 0.50 7 4 3 0 0 0 0 0 0
.............................................................................................................CCACGCTCCTCGTAAAATTTGCTTGAGT.................................................................................................................. 28 0 7 0.43 3 3 0 0 0 0 0 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGCTTGAGT.................................................................................................................. 29 0 7 0.43 3 3 0 0 0 0 0 0 0
.............................................................................................................CCACGCTCCTCGTAAAATTTGCTTGAG................................................................................................................... 27 0 7 0.43 3 3 0 0 0 0 0 0 0
.............................................................................................................CCACGCTCCTCGTAAAATTTGCT....................................................................................................................... 23 0 7 0.43 3 3 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTAACGTTAATTAGCGAAGGT......... 21 2 5 0.40 2 0 0 0 0 0 2 0 0
.......................................................................AGAGCCAAGACGTTTTGTCGAGT............................................................................................................................................................. 23 0 13 0.38 5 3 2 0 0 0 0 0 0
..............................................................TTACCTCGTAGAGCCAAGACGTTT..................................................................................................................................................................... 24 0 11 0.36 4 4 0 0 0 0 0 0 0
..............................................................................................................................TTTGCTTGAGTGTAGGCAGTTGCC..................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................TTGCTTGAGTGTAGGCAGTTGCCTTGC................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................................................................GCTTGAGTGTAGGCAGTTGCCTTGC................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................TTTGCTTGGGTGTAGGCAGTTGCCT.................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................TTTGCTTGAGTGTAGGCAGTTGCCTT................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................TTTGCTTGAGTGTAGGCAGTTGCCT.................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAAACTGGGAAGCGTCCACGATCCGT........................................ 26 0 13 0.31 4 3 0 0 1 0 0 0 0
........................................................................................................................................................................................ATAAACTGGGAAGCGTCCAAGATCCGT........................................ 27 2 13 0.31 4 3 1 0 0 0 0 0 0
................................................................................................................CGCTCCTCGTAAAATTTGCTTGAGT.................................................................................................................. 25 0 7 0.29 2 2 0 0 0 0 0 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGCT....................................................................................................................... 24 0 7 0.29 2 2 0 0 0 0 0 0 0
...........................................................................................................TACCACGCTCCTCGTAAAATTTGCT....................................................................................................................... 25 0 7 0.29 2 1 0 0 0 1 0 0 0
............................................................CTTTACCTCGTAGAGCCAAGACGT....................................................................................................................................................................... 24 0 11 0.27 3 2 1 0 0 0 0 0 0
.............................................................TTTACCTCGTAGAGCCAAGACGTTT..................................................................................................................................................................... 25 0 11 0.27 3 3 0 0 0 0 0 0 0
............................................................CTTTACCTCGTAGAGCCAAGACGTTT..................................................................................................................................................................... 26 0 11 0.27 3 3 0 0 0 0 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCCACGATCCGTTT...................................... 22 0 12 0.25 3 3 0 0 0 0 0 0 0
............................................................................................................................................GGCAGTTGCCTTGCCGTTCAT.......................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................CTGGGAAGCGTCCACGATCCGTTT...................................... 24 0 12 0.25 3 1 0 0 0 2 0 0 0
........................................................................................................................................................................................................................GCAGTTTAGCGTTAATTAGCTAAGGTT........ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................................................................AGTGTAGGCAGTTGCCTTGCCGTT............................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGTTTAGCGTTAATTAGCTAAGGTT........ 25 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAAACTGGGAAGCGTCCACGATCCGTTT...................................... 28 0 12 0.25 3 2 0 1 0 0 0 0 0
...........................................................................................................................................................................................AACTGGGAAGCGTCCACGATCCGTTT...................................... 26 0 12 0.25 3 2 0 0 0 0 1 0 0
.........................................................................................................................................GTAGGCAGTTGCCTTGCCG............................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................................................................CAGTTGCCTTGCCGTTCATA......................................................................................... 20 0 4 0.25 1 0 0 0 1 0 0 0 0
.............................................................................................................................................GCAGTTGCCTTGCCGTTCATAAACCAC................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................GCAGTTGCCTTGCCGTTCATAAACCAT................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................................................................GCCTTGCCGTTCATAAACCATGCCAAT............................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................GTGTAGGCAGTTGCCTTGCCGT.............................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................AACTGGGAAGCGTCCACGATCCGT........................................ 24 0 13 0.23 3 2 0 0 0 1 0 0 0
..........................................................................................................................................................................................AAACTGGGAAGCGTCCAAGATCCGT........................................ 25 1 13 0.23 3 1 0 0 2 0 0 0 0
....................................................................CGTAGAGCCAAGACATTTTGTCGAGT............................................................................................................................................................. 26 1 13 0.23 3 1 2 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTAACGTTAATTAGCTAAG........... 19 1 5 0.20 1 1 0 0 0 0 0 0 0
...CGACAGTGGTAATCTACAGT.................................................................................................................................................................................................................................... 20 0 11 0.18 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................AGCGTCCACGATCCGTTTAGTGCAGTTT............................ 28 0 11 0.18 2 2 0 0 0 0 0 0 0
............................................................TTTTACCTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 27 1 11 0.18 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................GAAGCGTCCACGATCCGTTTAGTGCAGT.............................. 28 0 11 0.18 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................TGGGAAGCGTCCACGATCCGTTT...................................... 23 0 12 0.17 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCCACGATCCGTTTAGT................................... 25 0 12 0.17 2 2 0 0 0 0 0 0 0
..................................................................CTCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 21 0 13 0.15 2 2 0 0 0 0 0 0 0
.......................................................................AGAGCCAAGACGTTTTGTCGAG.............................................................................................................................................................. 22 0 13 0.15 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAACTGGGAAGCGTCCACGATCCGT........................................ 25 0 13 0.15 2 1 0 0 0 1 0 0 0
.......................GGTGTTGTCCGATCTC.................................................................................................................................................................................................................... 16 0 13 0.15 2 0 2 0 0 0 0 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGCTT...................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0
...............................................................................................................ACGCTCCTCGTAAAATTTGCTTGAGT.................................................................................................................. 26 0 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGCTC...................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0 0 0
.............................................................................AAGACGTTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 25 0 14 0.14 2 0 0 0 2 0 0 0 0
..............................................................................................................CACGCTCCTCGTAAAATTTGCTTGA.................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGC........................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGCTTGATT.................................................................................................................. 29 1 7 0.14 1 0 0 0 0 0 1 0 0
.................................................................................................................GCTCCTCGTAAAATTTCCTTGAGT.................................................................................................................. 24 1 7 0.14 1 0 0 0 0 0 1 0 0
............................................................................................................ACCACGCTCCTCGTAAAATTTGCTTGAG................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0 0 0 0
................................................................................ACGTTTTGTCGAGTGTGGTCTTCT................................................................................................................................................... 24 0 14 0.14 2 2 0 0 0 0 0 0 0
................................................................................................................CGCTCCTCGTAAAATTTGCT....................................................................................................................... 20 0 7 0.14 1 1 0 0 0 0 0 0 0
..................................................................................................................................CTTGAGTGTAGGCCGATG....................................................................................................... 18 2 15 0.13 2 2 0 0 0 0 0 0 0
.......................................................................................................................CGTAAAATTTGCTTGAGTGTAGGCAGTAG....................................................................................................... 29 1 8 0.13 1 1 0 0 0 0 0 0 0
...........................................................................................................TACCACGCTCCTCGTAAAAT............................................................................................................................ 20 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................................................................................CCACGCTCCTCGTAAAATTTG......................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................CGTTCATAAACCATGCCAATG............................................................................ 21 0 8 0.13 1 1 0 0 0 0 0 0 0
...CGACAGTGGTAATCTACAGTGGTGTTGT............................................................................................................................................................................................................................ 28 0 10 0.10 1 1 0 0 0 0 0 0 0
...............TCTACAGTGGTGTTGTCCGATCT..................................................................................................................................................................................................................... 23 0 11 0.09 1 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................TGTCCACGATCCGTTTAGTGCAGTTT............................ 26 1 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................AGCGTCCACGATCCGTTTAGTGCAG............................... 25 0 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................AACCTTGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 24 2 11 0.09 1 1 0 0 0 0 0 0 0
..............................................................TTACCTCGTAGAGCCAAGACGTTC..................................................................................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0
........GTGGTAATCTACAGTGGTGTT.............................................................................................................................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAGCGTCCACGATCCGTTTAGTGCAGTTT............................ 29 0 11 0.09 1 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................CCACGATCCGTTTAGTGCAGTTT............................ 23 0 11 0.09 1 1 0 0 0 0 0 0 0
.........TGGTAATCTACAGTGGTGTTGTCCGAT....................................................................................................................................................................................................................... 27 0 11 0.09 1 0 0 1 0 0 0 0 0
..........................................................ACAATTACCTCGTAGAGCCAAGACGTTTTGT.................................................................................................................................................................. 31 3 11 0.09 1 0 1 0 0 0 0 0 0
............................................................CTTTACCTCGTAGAGCCAAGACGTCTT.................................................................................................................................................................... 27 1 11 0.09 1 0 0 0 0 0 0 1 0
.............................................................TTTACCTCGTAGAGCCAAGACGT....................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0
..........GGTAATCTACAGTGGTGT............................................................................................................................................................................................................................... 18 0 11 0.09 1 1 0 0 0 0 0 0 0
................................................................ACCTCGTAGAGCCAAGACGTTTC.................................................................................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................TACCTCGTAGAGCCAAGACGTTTTG................................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAGCGTCCACGATCCGTTTAGTGCAGT.............................. 27 0 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................AGCGTCCACGATCCGTTTAGTGCAGT.............................. 26 0 11 0.09 1 1 0 0 0 0 0 0 0
..............................................................TTACCTCGTAGAGCCAAGACGTTTTC................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0 0 0
............................................................CTTTACCTCGTAGAGCCAAGACGTT...................................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................TACCTCGTAGAGCCAAGACGTTT..................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0
.......AGTGGTAATCTACAGTGGTGTTGTCC.......................................................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................ACTGGGAAGCGTCCACGATCCGTTT...................................... 25 0 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................ACAAACTGGGAAGCGTCCACGATCCGTTT...................................... 29 0 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCCACGATCCGTTTAGTGC................................. 27 0 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCCACGATCCGTTTAG.................................... 24 0 12 0.08 1 1 0 0 0 0 0 0 0
.................................................................CCTCGTAGAGCCAAGACGTT...................................................................................................................................................................... 20 0 12 0.08 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................GAAGCGTCCACGATCCGTTT...................................... 20 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................TGCTTGAGTGTAGGCAGTTGC...................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAACTGGGAAGCGTCCACGATCCGTTT...................................... 27 0 12 0.08 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCAACGATCCGTTTAGT................................... 25 1 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................TGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 19 1 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTGGGAAGCGTCCACGATCCGT........................................ 22 0 13 0.08 1 0 0 0 0 1 0 0 0
.......................................................................AGAGCCAAGACGTTTTGTCGAGTG............................................................................................................................................................ 24 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCCACGATCTGTTTAGT................................... 25 1 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................TCGTAGAGCCAAGACGTTTT.................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAAACTGGGAAGCGTCCACGATCCG......................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTGGGAAGCGTCCACGATCCGTT....................................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAACTGGGAAGCGTCCACGATCCGT........................................ 26 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................AGAGCCAAGACATTTTGTCGAG.............................................................................................................................................................. 22 1 13 0.08 1 1 0 0 0 0 0 0 0
............................................................................CAAGACGTTTTGTCGAGTGTGGTCTTCT................................................................................................................................................... 28 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................GTAGAGCCAAGACGTTTTGTCGAGT............................................................................................................................................................. 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................AGAGCCAAGACATTTTGTCGAGTGT........................................................................................................................................................... 25 1 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAAACTGGGAAGCGTCCACCATCCGTT....................................... 27 1 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................AACTGGGAAGCGTCCACGATCCGTT....................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................AGAGCCAAGACGTTTCGTCGAGTG............................................................................................................................................................ 24 1 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................ACAAACTGGGAAGCGTCCACGATCCGT........................................ 27 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CAAACTGGGAAGCGTCCACGATCCGTT....................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................TTGCTTGAGTGTAGGCAGTTG....................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................................................................AGCCAAGACGTTTTGTCGAGTG............................................................................................................................................................ 22 0 13 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAACTGGGAAGCGTCCACGATCCGTT....................................... 26 0 13 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAACTGGGAAGCGTCCAAGATCCGTT....................................... 26 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................AGAGCCAAGACGTTTTGTCGAGTGT........................................................................................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................GAAGCGTCCCCGATCCGT........................................ 18 1 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................CGTAGAGCCAAGACGTTTTGT.................................................................................................................................................................. 21 0 13 0.08 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................CAGGGAAGCGTCCACGATCAGT........................................ 22 2 13 0.08 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................GAAGCGTCCAAGATCCGTT....................................... 19 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................AACAAACTGGGAAGCGTCCACGATCCGT........................................ 28 0 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTGGGAAGCGTCCACGATCCGTTA...................................... 24 1 13 0.08 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................GAAGCGTCAACGATCCGTTTAGT................................... 23 1 13 0.08 1 0 0 0 1 0 0 0 0
..........................................................................................................................AAAATTTGCTTGAGTGTAGGCAGT......................................................................................................... 24 0 13 0.08 1 0 0 1 0 0 0 0 0
............................................................................CAAGACGTTCTGTCGAGTGTGGTCTT..................................................................................................................................................... 26 1 14 0.07 1 1 0 0 0 0 0 0 0
............................................................................CAAGACATTTTGTCGAGTGTGGTC....................................................................................................................................................... 24 1 14 0.07 1 1 0 0 0 0 0 0 0
....................................................................................TTTGTCGAGTGTGGTCTTCT................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0 0 0 0
............................................................................CAAGACGTTTTGTCGAGTGTGGT........................................................................................................................................................ 23 0 14 0.07 1 0 0 1 0 0 0 0 0
............................................................................CAAGACATTTTGTCGAGAGTGGTCAT..................................................................................................................................................... 26 3 14 0.07 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................GGGAAGCGTCCACGATCTGT........................................ 20 1 14 0.07 1 1 0 0 0 0 0 0 0
............................................................................CAAGACATTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 26 1 14 0.07 1 0 0 0 1 0 0 0 0
....................................................................................TTTGTCGAGTGTGGTCTTCTC.................................................................................................................................................. 21 0 14 0.07 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................CAAACTGGGAAGCGTCCACGATCTGT........................................ 26 1 14 0.07 1 1 0 0 0 0 0 0 0
..............................................................................AGACGTTTTGTCGAGTGTGGTCTTCT................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0 0 0
.................................................................................CGTTTTGTCGAGTGTGGTCT...................................................................................................................................................... 20 0 15 0.07 1 1 0 0 0 0 0 0 0
..............................................................................AGACGTTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 24 0 15 0.07 1 0 0 0 1 0 0 0 0
.................................................................................AGTTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 21 1 15 0.07 1 1 0 0 0 0 0 0 0
.................................................................................CCCTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 21 2 15 0.07 1 0 0 0 0 0 0 0 1
..................................................................................GTTTTGTCGAGTGTGGTCTT..................................................................................................................................................... 20 0 15 0.07 1 0 0 1 0 0 0 0 0
...................................................................................ATTTGTCGAGTGTGGTCT...................................................................................................................................................... 18 1 17 0.06 1 0 0 1 0 0 0 0 0
.....ACAGTGGTAGTCTTCATTG................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_35:18211-18461 + dps_1984 CATGCT------------GTCACCATTAGATGTCACCACAACAGGCTAGAGTATCTCGTCC-------------------AGAAATTTT-TCGAAATGGAGCATCTCGGTTCTGCAA-A---ACAGCTCACACCAGAAGAGGGATGGTGCGAGGAGCATTTTAAACGAA-CTCACATCCGTCAACGGAACGGCAAGTATTTGGTACGGTTAC---TTAAGCGTTTGTTTGACCCTTCGCAGGTGCTAGGCAAATCACGTCAAATCGCAATTAATCGATTCCAAATGCTTCA------------
droPer2 scaffold_83:192204-192457 + CACGCT------------GTCACCATTAGATGTCACCACAACAGGCTAGAGAATCTCGTCC-------------------GGAAATTTT-TCGAAATGGAGCATCTCGGTTCTGCAA-A---ACAGCTCACACCAGAAGAGGGATGGTGCGAGGAGCATTTTAAACGAA-CTCACATCCGTCAACGGAACGGCAAGTATTTGGTACGGTTACCACTTAAGCGTTTGTTTGACCCTTCGCAGGTGCTAGGCAAATCACGTCAAATCGCAATTAATCGATTCCAAATGCTTCA------------
droWil2 scf2_1100000004968:3258636-3258798 - CA----------------------------------------------------------------------------------------------------------------------------------GTAGAGGATAACTGGTGCGAAGATTTCTTCGTTAAGA-CACATAGCCGAATGCCGTCTGGGAAGTATGTTGTTCGTCTTCCTTTTCTTACATACTTGGACGAATCAATGGTAATTGGAGAATCATATAAGAGCGCGTTAAACCGATTACATTCTCTGGACAG---------
droVir3 scaffold_12735:246096-246314 - GC--------------------------------------------TCGACAATGTTTTAC-------------------GTAAGTTTT-GGGAACTAGAGCAATTCGACAATGA-GTCTCCAGGTCTCTCATCGAAGGAGAGGTGTTGCGAGGACTTTTTTGTAAA-------TCGTCGCTTATCTTCGGGAAAATATCTTGTGCGTTTACCTCTTTTGTCCCATCTGGATTAAACTATGGTGATTGGTTGGTCATATCGAAGCGCACTGAAGCGACTAGACTATCTGGA------------
droMoj3 scaffold_6473:16842462-16842526 - CACGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGGAAACTCGCGTAAGCAAGCTATGGCCAGACTAATGCAAATGGAGAAAAAATTCAA
droAna3 scaffold_13082:2045602-2045846 + CATGTG------------GTAACTATTCGATGCCATAAGACTAATTTAGATGCTCTGGTAC-------------------AAGGATTTT-TCGATATTGATCGAATTGGCTCTGAGA-G---GACGTACACAGAAGAAGAACTATGGTGTGAAAATCATTTTCAGCGTA-CTCACTCCAGGCAACCCAATGGGAAATACCTGGTACGGCTTCCGTTAAAAACTGAATTTGACAAAAAACAAGTCATCGGAAAGTCTCATCAAATCGCACTTAATAGGTTCCA---------------------
droBip1 scf7180000396550:20418-20672 - CACTCC------------ATCACTGTCCGTTGTAACACCACGACGCTTGATCATCTGGTGC-------------------AAAGGTTCT-TCGAACTAGATAGCGTGTCGTCTGAAC-G---CCAACTCACCACAGAGGAACGATGGTGTGAAGAACACTTTCGTCAAACCCACTGTTCGACAGCCCAACGGGAAATACATGGTTCGCTTACCACTGAAAACCTTGTTCGACCCGTCACAAGTTCTAGGCCGATCAAAACATATAGCCTTAAATCGTTTCTACACACTAGA------------
droKik1 scf7180000301138:20078-20349 - GAAGGAGTAAGAGAAGCAACACAATTGCGCTGTCATCGAGTGCAGCTG-------------GATACGGAGGCATTGCTGAAGCGTTTTT-GTGAGGTCGAGTCAGTTCCGGA----TCGCCCTATAGCGACGGAAGGGGACCTCTGGTGCGAGTCGTTTTTTCAGAAGA-CCCACGTGCGTCGACCGGATGGCCGCTACGTGGTCAGGTTGCCTTTTAAAACCTATCTCGATCCGACCATGGTCTTAGGAAAATCCCATCAGATGGCGCTTAATCGGTTTCTACAGATGGA------------
droFic1 scf7180000453816:856-1121 - CATGCC------------ATATCCATTCGATGCCATCAGACAAATTTGGAGTCTTTGGTCA-------------------ATAAGTTTT-TTGAGCTAGAGAAAATTCCCGAAACTC-G---ACAGTTGACAGCAGAAGAACAATGGTGCGAGGATCATTTCAAACGCA-CGCATACCCGTCAACCCAATGGGAAATATGTGGTTCGGCTCCCATTCAAGACGCAGTTCGATTCCTCGCAAGTTCTTGGGAAATCTCGGCAAATAGCCCTTAATCGCTTCCATATGTTGGAGCGCAAGTTTCA
droEle1 scf7180000489624:11840-12090 - CAAGTT------------G--------CACTGCCATCGAGTATTCTTC-------------GACCCCGAATCGCTGGTTAAGAATTTTTGGCGAGGTCGAGTCGGTGCCGCA----CCG---CTCGTGTGCCACATAGGGTCTCTGGTGCGAATCATATTTTCAAAAAAACTCATCTGCGACGCTCAGATGGCCGTTACGTAGTGCGACTACCATTAAAAACATATCTGGATCCGACTATTATTTTGGGAAAATCTCACCAAGTGGCACTGAATAGATTCGTGCAGTTGGA------------
droRho1 scf7180000779182:121649-121912 - CATTTA------------ACTACCATCAGGTGTCATTACACAAACTTGGAAAGGCTGGTAC-------------------AAAAATTCT-TCGACATCAATGAACTTAATTCTACGC-G---ATCCCTAACACCAGAAGAAGAATGGTGCGAAAACCACTTCCAAAAAA-CGCACATACGACAGGAAAATGGCAAGTACATGGTGCGTTTACCATTTAAACGTTTGTTTGACCCCTCACAGGTTCTAGGTAGGTCACGAC--ATTGCATTAAACCGATTCCAAAAGCTTGAAAGAAAGTTCCA
droBia1 scf7180000302386:95371-95623 - CAT-CA------------ATCTCCATCCGTTGTAATTTGACAAACCTAAACAACATGGTAC-------------------AGAGGTTTT-TCGAATTGGATCAGGTCTGCACAACAA-G---ACAACTCAACGCAGAGGAAAGATGGTGTGAAGACCATTTTTAACAAA-CTCATATCCGTCAGCCGAATGGAAAATATCTGGTTCGTTTGCCTTTAAAAACGTTGTTTGACCCCACACAGGTGATCGGCCGGTCAAGGTAAATCGCATTAAACCGTTTTCACGCCCTGGA------------
droTak1 scf7180000414167:21390-21636 - TC-------------------TCTATTCGTTGTAATTTGGCAAGCCTAAACAACATGGTAC-------------------AGAGGTTTT-TCGAATTGGATCAGGTTTCCACGACAA-G---ACAACTCACCGCACAGGAGAAGTGGTGTGAAGACCATTTTCAACGAA-CTCATATCCGTCAGCCGAATGGGAAATATCTCGTCCGTTTACCTCTAAAAACTTTGTTTGATCCCACACAGGTGCTCGGCCGGTCAAGGCAAATTGCATTAAACCGTTTCCACGCCCTGGA------------
droEug1 scf7180000405301:15595-15850 - GAAGCG------------ACCCAGGTTCGGTGTCATCGGGTT----TG-------------GACACCGAGGCTTTGCTCAAGCGTTTCT-GCGAGGTGGAGGCCGTTCCGGA----CAGTTCTCTCACGTCGGAGGGGGACCTCTGGTGCGAAGCCTTCTTTCAGAAGA-CACACATTCGGCGATCGGATGGCCGTTACGTGGTACGGTTGCCCTTCAAAACCTTCATTGATCCAACTATGGTTCTGGGAAGATCGCATCAGGTGGCGCTGAATAGGTTCTTGCAGTTGGA------------
dm3 chr2L:6879251-6879518 + CACGCC------------A----CATTCGATGTAATCATGCCATAATA-------------AACTCCGAAGAGCTGCTTAAGGTATTTT-GCGAGGTAGAATCAGTTCCAGA----ACGCCCAAAGCTCTCCAAAGAAGATCAATGGTGCGAGTCTTTCTTTAAGCAGA-CCCATCAACGTCAACCAGACGGCAGTTATCAAGTCCGTTTGCCATTCAAGAGGAACTTTGACCCCAGTATGACGCTCGGAAAATCTCATCAGATCGCCCTGAACAGATATCTTCAACTCGAAAGGCGCCTTCA
droSim2 node_32349:203-463 + CAT-----------------------TCGTTGTAATCATGCCATAATA-------------AACTCCGAAGAGCTGCTTAAAGTATTCT-GCGAGGTAGAATCAGTTCCAGA----ACGCCCAAAGCTCTCCAAAGAAGATCAATGGTGCGAGTCTTTCTTTAAACAGA-CCCATCAACGTCAACCAGACGGCAGTTATCAAGTCCGTTTGCCATTCAAGAGGAACTTTGACCCCAGTATGACGCTCGGAAAATCTCATCAGATCGCCCTGAACAGATATCTTCAACTCGAAAGGCGCCTTCA
droSec2 scaffold_10918:278-545 + CACGCC------------A----CATTCGATGTAATCATGCCATAATA-------------AACTCCGAAGAGCTGCTTAAGGTATTTT-GCGAGGTAGAATCAGTTCCAGA----ACGCCCAAAGCTCTCCAAAGAAGATCAATGGTGCGAGTCTTTCTTTAAGCAGA-CCCATCAACGTCAACCAGACGGCAGTTATCAAGTCCGTTTGCCATTCAAGAGGAACTTTGACCCCAGTATGACGCTCGGAAAATCTCATCAGATCGCCCTGAACAGATATCTTCAACTCGAAAGGCGCCTTCA
droYak3 X:21031570-21031834 - CAAACG------------GTCACCGTTCGCTGTAATGTAACAAATCTCGACAATATGGTGC-------------------AGAAGTTCT-TTAAATTGGATCAAGTTCCAACTGAAC-G---CCAGCTCACTCCTGAAGAACAGTGGTGCGAACAACATTTTGTGCAAA-CCCATGTTAAACAGCCCAACGGAAAGTACATGGCTCGATTGCCTTTCAAAACATTGTTCGACCCTTCACAAGTTTTAGGTCAATCCAGACAGAA-TCATTGAATCGCTTTCACGCCTTGGAACGGAAACTTCA
droEre2 scaffold_4845:972720-972870 + AC---------------------------------------------------------------------------------------------------------------------------------TCCAGAGGAATAATAGTGTGAAGAACATTTTGTGGATA-CCCATGTTCGTCAACTAAACGGAAAATACGTGGTCCGC-TGCCGTTAAAAACTACATATGATCCTTCTCAAGTTCTCGGAAGATCCAGACAGATCGGCATAAATCGTTTTTA---------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CATGCT------------GTCACCATTAGATGTCACCACAACAGGCTAGAGTATCTCGTCC-------------------AGAAATTTT-TCGAAATGGAGCATCTCGGTTCTGCAA-A---ACAGCTCACACCAGAAGAGGGATGGTGCGAGGAGCATTTTAAACGAA-CTCACATCCGTCAACGGAACGGCAAGTATTTGGTACGGTTAC---TTAAGCGTTTGTTTGACCCTTCGCAGGTGCTAGGCAAATCACGTCAAATCGCAATTAATCGATTCCAAATGCTTCA------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................AACGAA-CTCACATCCGTCAACGG....................................................................................................................2331.6750500000000
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCAGA......................................................................................................................................................................24141.642302001000200
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCAG.......................................................................................................................................................................23141.432001800000200
.........................TTAGATGTCACCACAACAGGCTAGA.............................................................................................................................................................................................................................................................25111.271401400000000
.........................TTAGATGTCACCACAACAGGCTAG..............................................................................................................................................................................................................................................................24111.18130800000320
.........................TTAGATGTCACCACAACAGGCTAGAG............................................................................................................................................................................................................................................................26111.09120800001300
.........................TTAGATGTCACCACAACAGGCTA...............................................................................................................................................................................................................................................................23131.081401400000000
...................................................................................................................................................................AACGAA-CTCACATCCGTCAACGGAAC.................................................................................................................2631.0030300000000
.........................TTAGATGTCACCACAACAGGCT................................................................................................................................................................................................................................................................22130.92120910002000
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCAGAAG....................................................................................................................................................................26130.921201000000110
..................................................................................................................................................................................................................AC---TTAAGCGTTTGTTTGACCCTTC..................................................................24140.86120900010200
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCA........................................................................................................................................................................22140.861201000000200
.......................................................................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTCG.................................................................23140.79110800021000
....................................................................................................................................................................ACGAA-CTCACATCCGTCAACGG....................................................................................................................2230.6720200000000
....................................................................................................................................................................................TCAACGGAACGGCAAGTATTTGG....................................................................................................2350.6030000000030
.........................TTAGATGTCACCACAACAGGC.................................................................................................................................................................................................................................................................21130.4660510000000
.............................................................................................AAATGGAGCATCTCGGTTCTGCAA-A---.....................................................................................................................................................................................25110.4550000000500
.............................................................................................................TTCTGCAA-A---ACAGCTCACACC.........................................................................................................................................................................21140.3650320000000
...................................................................................................................................................................AACGAA-CTCACATCCGTCAACGGA...................................................................................................................2430.3310100000000
...................................................................................................................................................................AACGAA-CTCACATCCGTCAACGGAA..................................................................................................................2530.3310100000000
.................................................................................................................................................................TAAACGAA-CTCACATCCGTCAACGG....................................................................................................................2530.3310000000100
...........................................................................................................................................................................TCACATCCGTCAACGGAACGGCA.............................................................................................................2340.2510100000000
.......................................................................................................................................................................AA-CTCACATCCGTCAACGGAACGGCAA............................................................................................................2740.2510100000000
.............................................................................................................................................................................................................................................................TCACGTCAAATCGCAATTAATCG...........................2340.2510010000000
........................................................................................................................................................................................................................TAAGCGTTTGTTTGACCCTTCG.................................................................22140.2130300000000
..................................................................................................................................................................................................................AC---TTAAGCGTTTGTTTGACCCTTCG.................................................................25140.2130200001000
.......................................................................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTCGC................................................................24140.2130200001000
.........................................................................................................................................................................................GGAACGGCAAGTATTTGGTACGG...............................................................................................2350.2010100000000
.....................................................................................................................................................................................CAACGGAACGGCAAGTATTTGG....................................................................................................2250.2010100000000
..............................................................................................................TCTGCAA-A---ACAGCTCACACCAG.......................................................................................................................................................................22150.2030300000000
..........................TAGATGTCACCACAACAGGCTAGA.............................................................................................................................................................................................................................................................24110.1820200000000
..........................TAGATGTCACCACAACAGGCTAGAG............................................................................................................................................................................................................................................................25110.1820200000000
..............................................................................................................................................................TTTTAAACGAA-CTCACATCCGTCAACG.....................................................................................................................27120.1720000000200
...................................................................................................................................................................AACGAA-CTCACATCCGTCAACG.....................................................................................................................22120.1720200000000
.......................................................................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTCGCAGG.............................................................27130.1520200000000
................................................................................................................................................TGGTGCGAGGAGCATTTTAAACGAA-C....................................................................................................................................2670.1410000001000
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCAGAA.....................................................................................................................................................................25140.1420200000000
.............................................................................................................TTCTGCAA-A---ACAGCTCACAC..........................................................................................................................................................................20140.1420200000000
..........................................................................................TCGAAATGGAGCATCTCGG..................................................................................................................................................................................................19110.0910100000000
.......................CATTAGATGTCACCACAACAGGC.................................................................................................................................................................................................................................................................23110.0910100000000
........................................................................................T-TCGAAATGGAGCATCTCGG..................................................................................................................................................................................................20110.0910100000000
..................................................................................................................................................................................................................................................TGCTAGGCAAATCACGTCAAATCGC....................................25110.0910100000000
.............................ATGTCACCACAACAGGCTAGA.............................................................................................................................................................................................................................................................21110.0910100000000
.....T------------GTCACCATTAGATGTCACCA.........................................................................................................................................................................................................................................................................21120.0810100000000
.........................................................................................................................................................................................................................................CTTCGCAGGTGCTAGGCAAA..................................................20120.0810100000000
....................................................................................................................................................................ACGAA-CTCACATCCGTCAACG.....................................................................................................................21120.0810100000000
..............................................................................................................................................................TTTTAAACGAA-CTCACATCCGTCA........................................................................................................................24130.0810100000000
........................................................................................................CTCGGTTCTGCAA-A---ACAGCTC..............................................................................................................................................................................21130.0811000000000
..............................................................................................................................................................TTTTAAACGAA-CTCACATCCGTC.........................................................................................................................23130.0810100000000
...............................................................................................................................................................................................................................TTGTTTGACCCTTCGCAGGTGC..........................................................22130.0810100000000
.....................................................................................................CATCTCGGTTCTGCAA-A---ACAG.................................................................................................................................................................................21130.0810000000010
..........................TAGATGTCACCACAACAGGCTA...............................................................................................................................................................................................................................................................22130.0810100000000
...........................AGATGTCACCACAACAGGCTA...............................................................................................................................................................................................................................................................21130.0810100000000
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCAGAAGA...................................................................................................................................................................27130.0810100000000
..........................TAGATGTCACCACAACAGGCT................................................................................................................................................................................................................................................................21130.0810100000000
............................................................................................................GTTCTGCAA-A---ACAGCTCACACCAGAAG....................................................................................................................................................................27130.0810100000000
...................................................................................................................................................................AACGAA-CTCACATCCGTCAAC......................................................................................................................21130.0810100000000
.....................................................................................................................................................................................................................................GACCCTTCGCAGGTGCTAGGT.....................................................21130.0810100000000
.........................TTAGATGTCACCACAACAGG..................................................................................................................................................................................................................................................................20130.0810100000000
........................................................................................................................................................................................................................TAAGCGTTTGTTTGACCCTTC..................................................................21140.0710100000000
.......................................................................................................................................................................................................................TTAAGCGTTTGTTTGACCCTTC..................................................................22140.0710100000000
.............................................................................................................TTCTGCAA-A---ACAGCTCACACCAT.......................................................................................................................................................................23140.0710100000000
...................................................................................................................................................................................................................C---TTAAGCGTTTGTTTGACCCTTCG.................................................................24140.0710000001000
..................................................................................................................................................................................................................AC---TTAAGCGTTTGTTTGACCCT....................................................................22140.0710100000000
..................................................................................................................................................................................................................AC---TTAAGCGTTTGTTTGACCCTT...................................................................23140.0710100000000
..................................................................................................................................................................................................................AC---TTAAGCGTTTGTTTGACCCTTCGCAG..............................................................28140.0710100000000
..............................................................................................................TCTGCAA-A---ACAGCTCACACCAGA......................................................................................................................................................................23150.0710100000000
..............................................................................................................................................................TTTTAAACGAA-CTCACATCC............................................................................................................................20150.0710000000100
droPer2
CACGCT------------GTCACCATTAGATGTCACCACAACAGGCTAGAGAATCTCGTCC-------------------GGAAATTTT-TCGAAATGGAGCATCTCGGTTCTGCAA-A---ACAGCTCACACCAGAAGAGGGATGGTGCGAGGAGCATTTTAAACGAA-CTCACATCCGTCAACGGAACGGCAAGTATTTGGTACGGTTACCACTTAAGCGTTTGTTTGACCCTTCGCAGGTGCTAGGCAAATCACGTCAAATCGCAATTAATCGATTCCAAATGCTTCA------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................GAAATGGAGCATCTCGGTTC...............................................................................................................................................................................................20180.112000002
.................................................................................................................................................................TAAACGAA-CTCACATCCGTCAA.......................................................................................................................22200.102200000
.........................TTAGATGTCACCACAACAGGCTAGA.............................................................................................................................................................................................................................................................25140.071010000
......................................CAACAGGCTAGAGAATCTCG.....................................................................................................................................................................................................................................................20150.071000001
........................................................................................................CTCGGTTCTGCAA-A---ACAGCTC..............................................................................................................................................................................21180.061010000
droWil2
CA----------------------------------------------------------------------------------------------------------------------------------GTAGAGGATAACTGGTGCGAAGATTTCTTCGTTAAGA-CACATAGCCGAATGCCGTCTGGGAAGTATGTTGTTCGTCTTCCTTTTCTTACATACTTGGACGAATCAATGGTAATTGGAGAATCATATAAGAGCGCGTTAAACCGATTACATTCTCTGGACAG---------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................TTCTTACATACTTGGACGAATCAATGG.............................................................27130.46606000
...................................................................................................................................................................TTAAGA-CACATAGCCGAATGCCGT...................................................................................................................24200.20400040
.......................................................................................................................................................................................................................TTCTTACATACTTGGACGAATCAATG..............................................................26130.15202000
..................................................................................................................................................................................................................................................TAATTGGAGAATCATATAAGAGCG.....................................2490.11101000
................................................................................................................................................................................................................................................GGTAATTGGAGAATCATATAAGAGCG.....................................2690.11101000
.............................................................................................................................................................................................................CGTCTTCCTTTTCTTACATACTTG..........................................................................24110.09101000
.....................................................................................................................................................................................................................TTTTCTTACATACTTGGACGAATCAAT...............................................................27120.08101000
.................................................................................................................................................................................................................TTCCTTTTCTTACATACTTGGACGAA....................................................................26120.08101000
........................................................................................................................................................................................................................TCTTACATACTTGGACGAATCAATGG.............................................................26130.08101000
.......................................................................................................................................................................................................................TTCTTACATACTTGGACGAATCA.................................................................23130.08100010
.......................................................................................................................................................................................................................TTCTTACATACTTGGACGAATCAA................................................................24130.08101000
.............................................................................................................................................................................................................................CATACTTGGACGAATCAATGGTAATT........................................................26160.06101000
.............................................................................................................................................................................................................................CATACTTGGACGAATCAATGGTA...........................................................23180.06101000
............................................................................................................................................................TTCTTCGTTAAGA-CACATAGCC............................................................................................................................22200.05101000
...................................................................................................................................................................TTAAGA-CACATAGCCGAATGCCG....................................................................................................................23200.05110000
...............................................................................................................................................................TTCGTTAAGA-CACATAGCCGAAT........................................................................................................................23200.05101000
............................................................................................................................................................TTCTTCGTTAAGA-CACATAGCCG...........................................................................................................................23200.05101000
droVir3
GC--------------------------------------------TCGACAATGTTTTAC-------------------GTAAGTTTT-GGGAACTAGAGCAATTCGACAATGA-GTCTCCAGGTCTCTCATCGAAGGAGAGGTGTTGCGAGGACTTTTTTGTAAA-------TCGTCGCTTATCTTCGGGAAAATATCTTGTGCGTTTACCTCTTTTGTCCCATCTGGATTAAACTATGGTGATTGGTTGGTCATATCGAAGCGCACTGAAGCGACTAGACTATCTGGA------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................TT-GGGAACTAGAGCAATTCGACAATG.............................................................................................................................................................................................2620.501000000000000000000000000000000010000000000000000000000000000000
droMoj3
CACGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGGAAACTCGCGTAAGCAAGCTATGGCCAGACTAATGCAAATGGAGAAAAAATTCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................GCGTAAGCAAGCTATGGCCAGACTA.......................2511.001100000
..................................................................................................................................................................................................................................................................TAAGCAAGCTATGGCCAGACT........................2111.001100000
....................................................................................................................................................................................................................................................TTAGGAAACTCGCGTAAGCAAGCTA..................................2511.001100000
.............................................................................................................................................................................................................................................................TCGCGTAAGCAAGCTATGGCCAGACT........................2611.001100000
.............................................................................................................................................................................................................................................................TCGCGTAAGCAAGCTATGGCCAGACTA.......................2711.001100000
...GAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGGAAACTCGCGTAAGCAAG.....................................2511.001100000
....................................................................................................................................................................................................................................................TTAGGAAACTCGCGTAAGCAAGCTATGG...............................2811.001100000
..CGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGGAAACTCGCGTAAGCAAGC....................................2711.001100000
....AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGGAAACTCGCGTAAGCAAG.....................................2411.001100000
...................................................................................................................................................................................................................................................................AAGCAAGCTATGGCCAGACTAATG....................24130.152200000
...................................................................................................................................................................................................................................................................................GACTAATGCAAATGGAGAAAAAAT....2490.111000010
.............................................................................................................................................................................................................................................................................TGGCCAGACTAATGCAAAT...............1990.111010000
................................................................................................................................................................................................................................................................................CCAGACTAATGCAAATGGAGAAAAAAT....2790.111000010
......................................................................................................................................................................................................................................................................................TAATGCAAATGGAGAAAAAATTCAA25100.101100000
droAna3
CATGTG------------GTAACTATTCGATGCCATAAGACTAATTTAGATGCTCTGGTAC-------------------AAGGATTTT-TCGATATTGATCGAATTGGCTCTGAGA-G---GACGTACACAGAAGAAGAACTATGGTGTGAAAATCATTTTCAGCGTA-CTCACTCCAGGCAACCCAATGGGAAATACCTGGTACGGCTTCCGTTAAAAACTGAATTTGACAAAAAACAAGTCATCGGAAAGTCTCATCAAATCGCACTTAATAGGTTCCA---------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CACTCC------------ATCACTGTCCGTTGTAACACCACGACGCTTGATCATCTGGTGC-------------------AAAGGTTCT-TCGAACTAGATAGCGTGTCGTCTGAAC-G---CCAACTCACCACAGAGGAACGATGGTGTGAAGAACACTTTCGTCAAACCCACTGTTCGACAGCCCAACGGGAAATACATGGTTCGCTTACCACTGAAAACCTTGTTCGACCCGTCACAAGTTCTAGGCCGATCAAAACATATAGCCTTAAATCGTTTCTACACACTAGA------------SizeHit CountTotal NormTotal
No Reads
droKik1
GAAGGAGTAAGAGAAGCAACACAATTGCGCTGTCATCGAGTGCAGCTG-------------GATACGGAGGCATTGCTGAAGCGTTTTT-GTGAGGTCGAGTCAGTTCCGGA----TCGCCCTATAGCGACGGAAGGGGACCTCTGGTGCGAGTCGTTTTTTCAGAAGA-CCCACGTGCGTCGACCGGATGGCCGCTACGTGGTCAGGTTGCCTTTTAAAACCTATCTCGATCCGACCATGGTCTTAGGAAAATCCCATCAGATGGCGCTTAATCGGTTTCTACAGATGGA------------SizeHit CountTotal NormTotal
No Reads
droFic1
CATGCC------------ATATCCATTCGATGCCATCAGACAAATTTGGAGTCTTTGGTCA-------------------ATAAGTTTT-TTGAGCTAGAGAAAATTCCCGAAACTC-G---ACAGTTGACAGCAGAAGAACAATGGTGCGAGGATCATTTCAAACGCA-CGCATACCCGTCAACCCAATGGGAAATATGTGGTTCGGCTCCCATTCAAGACGCAGTTCGATTCCTCGCAAGTTCTTGGGAAATCTCGGCAAATAGCCCTTAATCGCTTCCATATGTTGGAGCGCAAGTTTCASizeHit CountTotal NormTotal
No Reads
droEle1
CAAGTT------------G--------CACTGCCATCGAGTATTCTTC-------------GACCCCGAATCGCTGGTTAAGAATTTTTGGCGAGGTCGAGTCGGTGCCGCA----CCG---CTCGTGTGCCACATAGGGTCTCTGGTGCGAATCATATTTTCAAAAAAACTCATCTGCGACGCTCAGATGGCCGTTACGTAGTGCGACTACCATTAAAAACATATCTGGATCCGACTATTATTTTGGGAAAATCTCACCAAGTGGCACTGAATAGATTCGTGCAGTTGGA------------SizeHit CountTotal NormTotal
No Reads
droRho1
CATTTA------------ACTACCATCAGGTGTCATTACACAAACTTGGAAAGGCTGGTAC-------------------AAAAATTCT-TCGACATCAATGAACTTAATTCTACGC-G---ATCCCTAACACCAGAAGAAGAATGGTGCGAAAACCACTTCCAAAAAA-CGCACATACGACAGGAAAATGGCAAGTACATGGTGCGTTTACCATTTAAACGTTTGTTTGACCCCTCACAGGTTCTAGGTAGGTCACGAC--ATTGCATTAAACCGATTCCAAAAGCTTGAAAGAAAGTTCCASizeHit CountTotal NormTotal
No Reads
droBia1
CAT-CA------------ATCTCCATCCGTTGTAATTTGACAAACCTAAACAACATGGTAC-------------------AGAGGTTTT-TCGAATTGGATCAGGTCTGCACAACAA-G---ACAACTCAACGCAGAGGAAAGATGGTGTGAAGACCATTTTTAACAAA-CTCATATCCGTCAGCCGAATGGAAAATATCTGGTTCGTTTGCCTTTAAAAACGTTGTTTGACCCCACACAGGTGATCGGCCGGTCAAGGTAAATCGCATTAAACCGTTTTCACGCCCTGGA------------SizeHit CountTotal NormTotal
No Reads
droTak1
TC-------------------TCTATTCGTTGTAATTTGGCAAGCCTAAACAACATGGTAC-------------------AGAGGTTTT-TCGAATTGGATCAGGTTTCCACGACAA-G---ACAACTCACCGCACAGGAGAAGTGGTGTGAAGACCATTTTCAACGAA-CTCATATCCGTCAGCCGAATGGGAAATATCTCGTCCGTTTACCTCTAAAAACTTTGTTTGATCCCACACAGGTGCTCGGCCGGTCAAGGCAAATTGCATTAAACCGTTTCCACGCCCTGGA------------SizeHit CountTotal NormTotal
No Reads
droEug1
GAAGCG------------ACCCAGGTTCGGTGTCATCGGGTT----TG-------------GACACCGAGGCTTTGCTCAAGCGTTTCT-GCGAGGTGGAGGCCGTTCCGGA----CAGTTCTCTCACGTCGGAGGGGGACCTCTGGTGCGAAGCCTTCTTTCAGAAGA-CACACATTCGGCGATCGGATGGCCGTTACGTGGTACGGTTGCCCTTCAAAACCTTCATTGATCCAACTATGGTTCTGGGAAGATCGCATCAGGTGGCGCTGAATAGGTTCTTGCAGTTGGA------------SizeHit CountTotal NormTotal
No Reads
dm3
CACGCC------------A----CATTCGATGTAATCATGCCATAATA-------------AACTCCGAAGAGCTGCTTAAGGTATTTT-GCGAGGTAGAATCAGTTCCAGA----ACGCCCAAAGCTCTCCAAAGAAGATCAATGGTGCGAGTCTTTCTTTAAGCAGA-CCCATCAACGTCAACCAGACGGCAGTTATCAAGTCCGTTTGCCATTCAAGAGGAACTTTGACCCCAGTATGACGCTCGGAAAATCTCATCAGATCGCCCTGAACAGATATCTTCAACTCGAAAGGCGCCTTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................TTTAAGCAGA-CCCATCAACGT..........................................................................................................................2111130.18143200000000000000000000000000000000000000000000000000000062329650000000000000000000000100000000100000000000000010020000000000000000000000000000000000000000000000000000120300000000000000000000021000000000000000000000000044001000020000011311200000010172110040120410089230030130000100000000129402000000000000000000120100051771414105360000000007838624620
................................................................................................................................................................................................................................ACTTTGACCCCAGTATGACGC..........................................................211295.75114900000000000000000000000000100000000000010000000000000000000000000000000000000001000000021300000000000000063746290000400000000000000000000000000000000000000000000035000900000000000000001001000000000000000000000001010400001000000056278342000000400101320040804000614100103701214200000000711512000000000000000200532100022241210110000000000530580
.........................................................................................................................CAAAGCTCTCCAAAGAAGATC.................................................................................................................................................................212091.10182200000000000001000000000000000000000000000000000000000018000000000000000000000000000000000100000000000000000103100000000000000000000000000000000000000000000011010100101010000000000000274001000000000000000000000000070300000411001264758706570000000018201001000110030320100130001000000000003504000000000000000400130000031161120380000000004251220
..................................................................CGAAGAGCTGCTTAAGGTATT........................................................................................................................................................................................................................211187.0995800000000000000000000000000700000000000000000000000000000000100000000000000000000000000033000000000000000021000000000000000000000000000000000000000000000000000001210616500000000000000001720038000000000000000001000000014141200010001000011410200000010050110020301000230100101800000000010000011115000000000000000100138001021228342215416760000000023312529250
................................................................................................................................................................TTAAGCAGA-CCCATCAACGTC.........................................................................................................................211180.64887000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000016000000000000000000000000000000000000000100000000000075000100000000000000001510130000000000000000000000000001750001000000003363050000002004101001040310010200010800111100000000667040000000000000006013000005132575512062529100000000020634450
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGT.................................................................211279.83958000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000001013010000000000000000000000000000000000000000000002423000004010000000000000000100300010100010030010100000007451000010010101124114610000000700721200301021001212000017020000000000003191016000000000000000200402200412144180422515000000000347413120
..............................................................................TAAGGTATTTT-GCGAGGTAGA...........................................................................................................................................................................................................211173.368070000000000000000000000000040000000000000000000000000100000000000000000000000000000000001900000001000000061110500000100000000000000000100014000000000020000000000100010000000000000000006403000000000020182030000000011811008212231401634520000000007000001010000032220121900000000000000247050000000000010001003203112171844511101777000000100161066110
...................................................................................................................................CAAAGAAGATCAATGGTGCGA.......................................................................................................................................................212063.351267000000000000000000000000006100000000200000000000100001760000000000000000000000000000000546000000000000000131145468000030000000000000000000000000000021000000000001000270190100000000000001001411001800000000000000000020000000145030100000000414800000008001520200708081001347102140420001120002000045809000000000000000200630000129147250145113670100000006921435950
........................................CCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................212063.10126200000000000000000000000100000000000000000001001000000000000000000000000000000000000000031000000000000000011900000010000000000000000000000000000000000000000001402800440000000000000000291510000000000000000001000000009150000233100072349145690000000004100000010000000000030160001000000000009922000000000000000400600000422111700090000000104150140
...........................................................................................................................................................................................................................GAGGAACTTTGACCCCAGTATGACGC..........................................................261262.8375400000000000000000000011000000000000000300110201011101000001000000000000000000000000000100000000000000000000000000000000000000000000130020007000062212202001000000000000000000000000000000001001030010005874292811701000044000031318619913036442011000000000010000000000000000000000000000000000000000000003002000512000000934000000000000000100001000
.......................................................................................TT-GCGAGGTAGAATCAGTTCC..................................................................................................................................................................................................211161.91681000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000054000000000000000000013100000000000000000000000000003000000112200011915423317000000000300100102010002121003080000000000000035505000000000000010500141000115010050051800000000114371250
....................................................................................ATTTT-GCGAGGTAGAATCAGT.....................................................................................................................................................................................................211157.0962800000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005100100000000000000000302001000000000000112560200000016411101011000001326240000000100162000020701000125310050180000100001000175140120000000000000002001520001912934115039470000000009445310
.................................................................................................................................................................................................................................CTTTGACCCCAGTATGACGCT.........................................................211251.42617000000000000000000000000003000000000000000000000000000500000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000017300601600000000000000040100010000000000000000010000000400000001300001713411850000005004011000000000033100000200010000100000414405000000000000000200500000241111611102300000000110234230
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......................................................................................................................................AGAAGATCAATGGTGCGAGT.....................................................................................................................................................20203.306600000000000000000000000000000000000100000000000001020000000000000000000000000000000000001000000000000000100500000000000000000000000000000000000000000000000000002002000000000000001100000300000000000000000000000000000000000000000000000000000000000001000000100000050000100000000102100000000100000000100100001061010004000000000213030
.....C------------A----CATTCGATGTAATCATGCC.....................................................................................................................................................................................................................................................................21113.273600000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215100000010030000000000000200000002000010000000000000000000000000000000010000000000000100000000001010
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACC......................................................................24113.27360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000001248600000000000000030304010000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000
..................................................................................................................................................................AAGCAGA-CCCATCAACGTCA........................................................................................................................20113.273600000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000011100012400000000042030
.......................CATTCGATGTAATCATGCCAT...................................................................................................................................................................................................................................................................21113.273600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000110000000150000000000000000000000001000000000000000000000001000000000000000000000600000040000000000000000310110
......................................................................................................................................................................................................................TTCAAGAGGAACTTTGACC......................................................................19113.273600000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064381100000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................CTCGGAAAATCTCATCAGAT.......................................20203.256500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000280800000000000000000000000030000000000000033200000000000000000000001043100000000000000000000000000000000000000000000000100000000000000000000000000002000020100000000003000
.............................................................AACTCCGAAGAGCTGCTTAAGGTA..........................................................................................................................................................................................................................24113.183500000000000000000000000000000000000000000000000102010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000100000000000000110000170000002000011000000000000100000000000000000000000000000100000000000000000000000000000000000101000000000000000100000000
.....................................................................................TTTT-GCGAGGTAGAATCAGTTCCAG................................................................................................................................................................................................25113.18350000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001200000000000000000000000000000000000010000000000000000000000000002040302111000000000000000000000000000000000000000000000000000000000003000000100010000400000000002000000101100000
.....................................................................AGAGCTGCTTAAGGTATTTT-GCGAGG...............................................................................................................................................................................................................26113.183500000000000000000000010100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000300000000000000000000100010010000000000000000000000000000000000000000000000000000000000070000001000000001021000000000000000000100100
...................................................................GAAGAGCTGCTTAAGGTATTT.......................................................................................................................................................................................................................21113.183500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002120100001000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000200000000000000010000000000000000000000000000000000000000000000000200000000000000000000060000000100000200000000001110
........................................................................................................................CCAAAGCTCTCCAAAGAAGAT..................................................................................................................................................................21203.1563000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000014000300000000000000000000000000200000010000000220000000000210000000000000000002010000000000000211000000000000000000000500000032000003000000000310100
............................................................................................................................................................................................................CCGTTTGCCATTCAAGAGGA...............................................................................20203.156300000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000002310000000000000923000000000000000000000000101000000000000000000000100000000000000000010030000102001000000000000005030
.....................................................................................TTTT-GCGAGGTAGAATCAGTTC...................................................................................................................................................................................................22113.09340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000001002118000000000010000000000000001000000010000000000000000000001000000000000011000004000100400000000012100
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCCCAG..................................................................28113.09340000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000080218191000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TCAAGAGGAACTTTGACCC.....................................................................19123.083700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057118500000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GATATCTTCAACTCGAAAGGCGCCTT..26203.05610000000000000000000000010000000000000000001100000000000000000000000000000000000000600010000000000000000002000010000000000000000000000000000001000001100100000000000000000000000000000000000012200000000000010000090000301020911210000000000000000000000000000000000000000000000000000000000002000000000010000211000000000100000100000000
...................................TCATGCCATAATA-------------AACTCCGAAGAGCT....................................................................................................................................................................................................................................27203.05610000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020400500100000000000000000000000000000000001201501000000000030203000001070206150000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000110000000
...........................................................................................................................................................................CCATCAACGTCAACCAGACGG...............................................................................................................21203.0561000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000022426000000000000000000000000000000000010000000000000000000000000000000000030000001000000000000000000010
...................................................................................TATTTT-GCGAGGTAGAATCAGTTCCAG................................................................................................................................................................................................27113.00330000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200100000000000000000000000000000000000002000000000100000000000001040114000000000000000000000000000000000000000000000000000000000000001000000000010000602000000000000000201000000
.........................................CATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................20202.9559000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000001000000000020000000000000000000001000000000000100000000000000000000000110010001923000000000000000000000000000000000000000000000000000000000000000000000010100001200000000000000000000
.....................................................................................................TCAGTTCCAGA----ACGCCCAAAG.................................................................................................................................................................................21202.955900000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000211501000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000940000000000000000000010000000001010000000000000000000000000000000000000100000004000000100000000036210
..............................................................................TAAGGTATTTT-GCGAGGTAGAA..........................................................................................................................................................................................................22112.91320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000133510000000000000000210110010000000000000000000000000000000001000000000000000000000000000000000000000000007000010100000000001010
......................................................................................................................................................................................................................TTCAAGAGGAACTTTGACCCCAGT.................................................................24112.91320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000002003534900000000000000010201001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TT-GCGAGGTAGAATCAGTTC...................................................................................................................................................................................................20112.91320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001057200000000000000000000000000001001000000000000001200000001000000000010030000001000000100000000010210
..................................................................CGAAGAGCTGCTTAAGGTAT.........................................................................................................................................................................................................................20112.91320000000000000000000000000000000000000100000100000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000010000000000214100000000000000000000000000000000000000000000001200000000000000000010000000003010100100000000003310
...................................................................................................................................................TGCGAGTCTTTCTTTAAGCAGA-.....................................................................................................................................22112.913200000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000010000000000000000000000101000000000000000000000000000000000000010000002000000000000000025020
.........................................................................................................................................................TCTTTCTTTAAGCAGA-CCCATCA..............................................................................................................................23112.91320000000000000000000000010000000000000000001002001010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100101011025000000000000000000000000000000000021100001000000000000000000300000210010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................ATCAGTTCCAGA----ACGCCCAA...................................................................................................................................................................................20202.905800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000005000000800000000000000000000000000000000000000000000000000000100010100000000000000000000000000000000000000010000000000000000000000000000000020000100000050000102000000000217350
.........................TTCGATGTAATCATGCCATAA.................................................................................................................................................................................................................................................................21112.823100000000000000000000000000000000000000000000000000000000000000000000000000000000000000028000000000000000001110000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000102100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010
...................................................................................TATTTT-GCGAGGTAGAATCAGT.....................................................................................................................................................................................................22112.82310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200020000000000000000000001011100000000000000000000000200000000000000000000000000000000000000001000101011007001000200000000012020
..................A----CATTCGATGTAATCATGCCA....................................................................................................................................................................................................................................................................21112.823100000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000111300002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000001000010000000000000000000000000000000011000000000000000000000011020
...............................................................................AAGGTATTTT-GCGAGGTAGAATC........................................................................................................................................................................................................23112.82310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613600000000000000000000002200000000000000000000000000000000000000000010000001000000000000000000000000000002000000200000000003000
...............................................................................................................................TCTCCAAAGAAGATCAATGGTGCGAGTC....................................................................................................................................................28202.805600000000000000000000000000000000000010000000010013000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001010100000000000000000000000000000000000000000000000000000000000309000000020000100000000000000000000000000000000000000000000000000000000000000000000300000000100000000000000000000000000
.............................................................................................AGGTAGAATCAGTTCCAGA----AC.........................................................................................................................................................................................21202.805600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000001000001916000000000170000000101000100000001000010000000000000000000000000001010000000003000100000000000024020
.................................................................................................................................................................................................................................................ACGCTCGGAAAATCTCATCAG.........................................21202.805600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000030200000000000000000000000000000000000000102060000000000000000000000000010000030100000000110100300000000000000010000710000011200011400000000020000
..........................................................................................................................................................................................................................................................AAATCTCATCAGATCGCCCTG................................21202.755500000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000000001820000000000000100001100001010001090000020000000010000000000000000000000150000000000000200000000021100
................................................................................................................................................................................................................TTGCCATTCAAGAGGAACTTT..........................................................................21202.75550000000000000000000000000020000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000001011000000000021000000000000000000100000101000002000000000200110020100000000000000000040000109101001300000000006150
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAATCTCAT............................................22202.755500000000000000000000000000000000000000010000000101020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030121100000000000301032200017000000000000000000000000000000000000000200000000000000000001000000000000000000001002501000000000100100
...................................................................................TATTTT-GCGAGGTAGAATC........................................................................................................................................................................................................19112.733000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000081071000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................CAAGAGGAACTTTGACCCCAGT.................................................................22122.67320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000003220200000000000000000000002001000000000000000000000000010000000000000000000000101000000000000000000000000007000000200000000012120
.....................................................................................................................................................................................................................................GACCCCAGTATGACGCTCGGA.....................................................21122.67320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000201000000000000050000000010010000000000000100000000000001000000001300000000000000000000010000003101000100000000011060
..............................................................................................GGTAGAATCAGTTCCAGA----ACGC.......................................................................................................................................................................................22202.655300100000000000000000000100000000000000000000000001000000001100000000000000000000000000000000000000000000000000000000000000000000000000000020000051000001108000000000000000000000000000000000001000011000000000000000000000040200000000000000000000000000100000000000000000000000000000000000002000000000000000801000000000000000000000000
......................................................................................................................................................................................AACCAGACGGCAGTTATCAAGTCCG................................................................................................25202.65530000000000000000000001000000000000000000100000000500100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081001000100000000000000000000000000000000000201400010100000001000230000200200110000000000000000000000000000000000000000000000000000000000000000000000101000000711000000000100000010000000
....................................................................................................................................................................................................................................................................................ATATCTTCAACTCGAAAGGCGC.....22202.65530000000000000000000000020000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400010000000010000000000000000000000001000000000000100000003000000000000000000701000001000075000000000001000000100000001000003000000000100000000100000000000000000000101002201101100000000000000
....................................................................................................................................AAAGAAGATCAATGGTGCGAGTCTT..................................................................................................................................................25202.65530000000000000000000001010000000000000000100020000300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121200044500000000000000000000000000000000000000000000000000000060000711200000000000000000000000000000000000000100000000000000000000000000001000000000000010000000000000200000001001010
.............................................................................................AGGTAGAATCAGTTCCAGA----ACGCC......................................................................................................................................................................................24202.65530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001710020001000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
...............................................................................................................................................................TTTAAGCAGA-CCCATCAACG...........................................................................................................................20112.64290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000100000000031000000000000000000000000000000000000000000000000100000000000000000000020000005002000100000000044120
.....................................................................................................................................................................................................ATCAAGTCCGTTTGCCATTCA.....................................................................................21202.605200000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000030010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000480000000000000000000000000110000020000010000000000000000000000000000000000000000000010000000000516240
..................................................................................................GAATCAGTTCCAGA----ACGCCCA....................................................................................................................................................................................21202.605200000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000011000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000020000000000000000000000000000000000000300000151010020000000000710420
....................................................................................................................................................................................................................................................................AGATCGCCCTGAACAGATATC......................21202.6052000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000007000000000000000000000000000000000000000000000000201300000000000000000000000000000000000000000000000000000000000010011001127000000000000000000000000000000000001000000000000000000000000000000000050000000000000000000000000000
.......................................GCCATAATA-------------AACTCCGAAGAG......................................................................................................................................................................................................................................21202.55510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000202000000000000020100000000020000000000000200000000000000000000010000000000000000000000020000017200200000000000093260
......................................................................................................................................................................................................TCAAGTCCGTTTGCCATTCAA....................................................................................21202.555100000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000700802000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000111000002000000000418110
....................................................................AAGAGCTGCTTAAGGTATTTT-G....................................................................................................................................................................................................................22112.55280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000060000000000000000000000000000002100000000010000000000000000000000000000000000000100000000000001000000050000012000000200000000003010
.........................................................................................................................................................TCTTTCTTTAAGCAGA-CCCAT................................................................................................................................21112.55280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000100000000000000032000000000000000000000000000000100000000000000000100200000000000000000011000000000000100000000025030
..............................................................................TAAGGTATTTT-GCGAGGTAG............................................................................................................................................................................................................20112.552800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000100000001000000000000000000000200000000000000000000000000000000001000000200110000000000000000000000000000000000000000000000100001000000000000000000000000040000000000000000011000
...............................................................................................................................................................................................................TTTGCCATTCAAGAGGAACTTTGAC.......................................................................25112.55280000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000101000000000000000000006000000010101011000000000000000000000000000000000001000000000000000010000000000000000010000000003000003000000000003000
.................................................................................GGTATTTT-GCGAGGTAGAAT.........................................................................................................................................................................................................20112.55280000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020004110006000000000000001000000001000000000100001000000000000000000000000000000000000000020001110300000000100000
.............................................................................................................................................................TCTTTAAGCAGA-CCCATCAACGTCA........................................................................................................................25112.55280000000000000000000002000000010000000000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000010000000000100100010000000001000040000301100000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000100000000
.....................................................................................................................................................................................................................ATTCAAGAGGAACTTTGACC......................................................................20112.55280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000020000000000002215600000000000000001010003021000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................AGGTATTTT-GCGAGGTAGAATCAGT.....................................................................................................................................................................................................25112.55280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000003000000000001000000000000000000000001011302311000000000000000000000000000100000000000000000000000000000004000000000000000320000000000000000000000000
................................................................................................................................................................................................................................ACTTTGACCCCAGTATGACG...........................................................20122.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184100000010000000000001000100000002000000000000001000000000000000000000010000000000000000000000000000
...........................................TAATA-------------AACTCCGAAGAGCTGCT.................................................................................................................................................................................................................................22202.45490000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000010002000000000300200000000000000000000010000000000000000000000000003001000030103000000000000010000000000000000000002000000000000000410000000000000000010010200013100100200000010113010
..............................................TA-------------AACTCCGAAGAGCTGCTTA...............................................................................................................................................................................................................................21202.45490000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000002060000000000000000000000000000000000000001000000000100000000000000000000000020010000000000000000000000000120000000110000030000000000010000000000000100000000000000000000000030000000000000000010000000018001103100000000021020
droSim2
CAT-----------------------TCGTTGTAATCATGCCATAATA-------------AACTCCGAAGAGCTGCTTAAAGTATTCT-GCGAGGTAGAATCAGTTCCAGA----ACGCCCAAAGCTCTCCAAAGAAGATCAATGGTGCGAGTCTTTCTTTAAACAGA-CCCATCAACGTCAACCAGACGGCAGTTATCAAGTCCGTTTGCCATTCAAGAGGAACTTTGACCCCAGTATGACGCTCGGAAAATCTCATCAGATCGCCCTGAACAGATATCTTCAACTCGAAAGGCGCCTTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGC.......272119.50239001000154166170000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCC......................................................................................................................................................................................23295.5019100036010219710011915000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGG........26267.5013500010083103740000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGC.....24263.001260004000154598000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGA........................................24249.00980000003465620000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCC.....................................................................................................................................................................................24248.5097000300228540676000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGCC....25240.50810081200251350000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGC.......................................................................................................................................................................................22239.0078002000849430399000
...................................TCATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................26335.67107000000195918101000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCA....................................................................................................................................................................................25234.50690001007511420345000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAA...................................................................................................................................................................................26233.006600010018413350193000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCCC....................................................................26221.50430000001816720000000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCCAGT.................................................................26219.5039000000294600000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGC.......22218.5037000000054325000000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCC.....................................................................25218.00360001001017350000000
...........................................................................................................................................................................................................................GAGGAACTTTGACCCCAGTATGACGC..........................................................26214.0028000100010191060000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGACGC..........................................................28213.5027027200014000020000
...................................................................................................................................................................AACAGA-CCCATCAACGTCAACCAGA..................................................................................................................25212.5025000000011445100000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGAT.......................................25212.50250000001201210000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGATC......................................26212.50250000001131010000000
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAATCTCATCAGA........................................26212.0024000000701340000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGG........21212.0024000060000117000000
...............................GTAATCATGCCATAATA-------------AACTCCGA..........................................................................................................................................................................................................................................25411.50460001701701911000000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAG.........2528.001600000070810000000
......................................TGCCATAATA-------------AACTCCGAAGAGCTGC..................................................................................................................................................................................................................................2637.672300000026236040000
...............................................................................................................................................................TTTAAACAGA-CCCATCAACGTCAACCAGA..................................................................................................................2927.501500010063320000000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAA..........2427.501500000060801000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGA.............................................................2527.001400100006025000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATG..............................................................2427.0014000000030110000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAG.........................................2327.001400000060800000000
..........................................................................................................TCCAGA----ACGCCCAAAGCTCTCCAAAGA......................................................................................................................................................................2727.001400000054401000000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATTCAAGA..................................................................................2536.672000000048422000000
........................................................................................................................................................................................................................................................................................CTTCAACTCGAAAGGCGCCTTCA2326.0012000000120000000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAT...................................................................................................................................................................................2626.0012000000002000100000
.................................................................................................................................................................TAAACAGA-CCCATCAACGTCAACCAGA..................................................................................................................2726.001200010034220000000
................................................................................................................................................................................................................TTGCCATTCAAGAGGAACTTTGACCC.....................................................................2625.501100000035210000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGATCGC....................................2825.501100000012620000000
...................................................................................................................................................................AACAGA-CCCATCAACGTCAACCAG...................................................................................................................2425.501100028000001000000
..................................ATCATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................2735.001500000029220000000
................................................................................................................................................................................................................................................................................ACAGATATCTTCAACTCGAAAGGC.......2425.001000000080200000000
...........................................................................................................................................................TTTCTTTAAACAGA-CCCATCAACGTC.........................................................................................................................2625.001000000023410000000
..................................................................................................................................................................................................................................................CGCTCGGAAAATCTCATCAGATCGCCC..................................2724.50900000060300000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACG........................................................................................................................................................................................2124.50900000011700000000
...............................GTAATCATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................3034.3313000000130000000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGCCT...2624.00800000000016010000
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAATCTCATCAGAT.......................................2724.00800000023120000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGT.................................................................2124.00800000000008000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGAC............................................................2624.00800100004003000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCG......2324.00800000001007000000
......................................TGCCATAATA-------------AACTCCGAAGAGCTGCT.................................................................................................................................................................................................................................2733.671100010044020000000
...............................GTAATCATGCCATAATA-------------AACTCCGAA.........................................................................................................................................................................................................................................2643.5014000000120200000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAA..........1923.50700006000001000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCT......................................................................................................................................................................................2323.50700000000000070000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGAA.......................................2523.50700000000400030000
..............................................................................................GGTAGAATCAGTTCCAGA----AC.........................................................................................................................................................................................2023.50700006000001000000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCCCTGA...............................2733.331000000045100000000
...............................GTAATCATGCCATAATA-------------AACTCCGAAGA.......................................................................................................................................................................................................................................2843.2513000100111000000000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGCG......2823.00600000020310000000
......................................TGCCATAATA-------------AACTCCGAAGAGCT....................................................................................................................................................................................................................................2433.00900000005310000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAAAGC................................................................................................................................................................................2923.00600000033000000000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATTCAAGAGG................................................................................2733.00900000007020000000
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGAGTCT...................................................................................................................................................2743.001200000026211000000
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAATCTCATCAGATC......................................2823.00600000001410000000
....................................CATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................2533.00900000016200000000
........................................................................................................................................................................................................................................................................................CTTCAACTCGAAAGGCGCCTTC.2223.00600000040200000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAG.........2023.00600006000000000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAAA..................................................................................................................................................................................2723.00600000020000022000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGCGC.....2922.50500000020200010000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCTT....................................................................................................................................................................................2522.50500000000000041000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACC......................................................................1622.50500000000005000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCT.....................................................................................................................................................................................2422.50500000000000041000
........................................................................................T-GCGAGGTAGAATCAGTTCCAGA----ACG........................................................................................................................................................................................2622.50500000020201000000
.............................................................................................................................................................................................................................................................TCTCATCAGATCGCCCTGAACA............................2232.33700000700000000000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATTCAAGAGGA...............................................................................2832.33700010023010000000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCC...................................2332.33700000012130000000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGA........................................1832.33700007000000000000
...............................GTAATCATGCCATAATA-------------AACTCCGAAG........................................................................................................................................................................................................................................2742.25900010050300000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGCCTT..2722.00400010000210000000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCCCA...................................................................2722.00400000011020000000
...................................................................................................................................................................AACAGA-CCCATCAACGTCA........................................................................................................................1922.00400004000000000000
...................................TCATGCCATAATA-------------AACTCCGAAGAG......................................................................................................................................................................................................................................2532.00600000024000000000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCCAGTA................................................................2722.00400000031000000000
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAATCTCATCAG.........................................2522.00400000000310000000
..........................................................................TGCTTAAAGTATTCT-GCGAGGTAGAATC........................................................................................................................................................................................................2832.00600000042000000000
...........................................................................................................................................................................................................................GAGGAACTTTGACCCCAGTATGACGCT.........................................................2722.00400000000000040000
...............................................................................................................................TCTCCAAAGAAGATCAATGGTGCGAGTC....................................................................................................................................................2842.00800010011104000000
..............................................................................................................................................................................................................................................ATGACGCTCGGAAAATCTCATCAG.........................................2422.00400000020200000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGATCGCCC..................................3022.00400000011200000000
........................................................................................T-GCGAGGTAGAATCAGTTCCAGA----ACGCC......................................................................................................................................................................................2822.00400000000000040000
........................................................................................T-GCGAGGTAGAATCAGTTCCAGA----ACGCA......................................................................................................................................................................................2822.00400000000000040000
...............................................................................................................................................................................................................TTTGCCATTCAAGAGGAACTTTGACCCC....................................................................2822.00400000012010000000
.....................................................................AGAGCTGCTTAAAGTATTCT-GCGAGG...............................................................................................................................................................................................................2622.00400000021001000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGCT....2522.00400000000220000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCTT.....................................................................................................................................................................................2422.00400000000000040000
...............................................................................................................................................................................................................TTTGCCATTCAAGAGGAACTTTGACCC.....................................................................2722.00400000040000000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAAAG.................................................................................................................................................................................2822.00400000000000022000
..............................................................................................................................................................................................................................................ATGACGCTCGGAAAATCTCATCAGA........................................2522.00400000020200000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCAT....................................................................................................................................................................................2522.00400000000000040000
....................................................................................................................................................................................TCAACCAGACGGCAGTTATCAAGTCC.................................................................................................2632.00600006000000000000
................................................................................................................................................................................................................TTGCCATTCAAGAGGAACTTTGACCCC....................................................................2722.00400000030100000000
...............................GTAATCATGCCATAATA-------------AA................................................................................................................................................................................................................................................1941.75700007000000000000
..............................................................................................GGTAGAATCAGTTCCAGA----A..........................................................................................................................................................................................1941.75700007000000000000
...............................................................................................................................TCTCCAAAGAAGATCAATGGTGCGAG......................................................................................................................................................2641.75700000001105000000
...............................GTAATCATGCCATAATA-------------AAC...............................................................................................................................................................................................................................................2041.75700007000000000000
.......................................................................................................................................................................................................................................................................TCGCCCTGAACAGATATCTTCAAC................2431.67500000001310000000
..............................TGTAATCATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................3131.67500000050000000000
...................................TCATGCCATAATA-------------AACTCCGAAGAGCTGC..................................................................................................................................................................................................................................2931.67500000003200000000
...............................................................................................................................................................................................................................................................TCATCAGATCGCCCTGAACAGATATCTT....................2831.67500000041000000000
..........................................................................................................................................................................................................................................CAGTATGACGCTCGGAAAATCTCATC...........................................2621.50300000003000000000
...........................................TAATA-------------AACTCCGAAGAGCTGCTTAAAG............................................................................................................................................................................................................................2721.50300010000001010000
..............................TGTAATCATGCCATAATA-------------AACTCCGAAGA.......................................................................................................................................................................................................................................2941.50600000050010000000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCC....................................................................2321.50300000021000000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCC.....................................................................1721.50300000000003000000
................................................................................................TAGAATCAGTTCCAGA----ACGCCCAAAGC................................................................................................................................................................................2721.50300000011000010000
................................................................................................................................................................................................................................................GACGCTCGGAAAATCTCATCAGATCGC....................................2721.50300000000100002000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTA................................................................2221.50300000000003000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAAT..................................................................................................................................................................................2721.50300000000000030000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTAT...............................................................2321.50300000000001020000
........................................................................................................................................................................................................................................................................................CTTCAACTCGAAAGGCGCCT...2021.50300000030000000000
........................................................................................................................................................................................................................................................................................CTTCAACTCGAAAGGC.......1621.50300000020001000000
............................................................................................................................................................................................................................AGGAACTTTGACCCCAGTATGAC............................................................2321.50300003000000000000
........................................................................................T-GCGAGGTAGAATCAGTTCCAGA----ACGC.......................................................................................................................................................................................2721.50300000000010020000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCCCAGT.................................................................2921.50300000002100000000
............................................................................................................................AGCTCTCCAAAGAAGATCAATGGTGCGA.......................................................................................................................................................2841.50600010003100010000
..........................................................................................................................................................................................................................AGAGGAACTTTGACCCCAGTATGACGC..........................................................2721.50300000003000000000
...........................................................................................................................................................................................................................................................AATCTCATCAGATCGCCCTGAACAGA..........................2631.33400000000310000000
................................................................................................................................................................................AACGTCAACCAGACGGCAGTTATCAAGT...................................................................................................2831.33400000040000000000
................................................................................................................................................................................AACGTCAACCAGACGGCAGTTATCAAG....................................................................................................2731.33400000030100000000
...............................................................................................................................................................................................................TTTGCCATTCAAGAGGAACTTTGA........................................................................2431.33400000021100000000
......................................TGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................2331.33400000002110000000
...................................TCATGCCATAATA-------------AACTCCGAAGA.......................................................................................................................................................................................................................................2441.25500000013010000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATC...........................................2121.00200000001100000000
................................TAATCATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................2931.00300000012000000000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGATCGCC...................................2921.00200000020000000000
....................................................................................................ATCAGTTCCAGA----ACGCCCAA...................................................................................................................................................................................2021.00200000000002000000
................................................................................................................................................................................................................................................................................ACAGATATCTTCAACTCGAAA..........2121.00200000002000000000
.........................................CATAATA-------------AACTCCGAAGAGCTGCTTAAAG............................................................................................................................................................................................................................2921.00200000020000000000
......................................................................................................................................AGAAGATCAATGGTGCGAGTCTTT.................................................................................................................................................2431.00300000000002010000
..............................................................................TAAAGTATTCT-GCGAGGTAGAATC........................................................................................................................................................................................................2431.00300000011001000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGT.....2421.00200000000002000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCA.....................................................................................................................................................................................2421.00200000000000020000
.............................................................................................................................................................................................................................................................TCTCATCAGATCGCCCTGAACAGA..........................2431.00300000000111000000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCCA...................................................................2421.00200000010100000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCTAT....................................................................................................................................................................................2521.00200000000000011000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCCCTGAA..............................2831.00300000001020000000
...............................................................................................................................................................................................................................................................................AACAGATATCTTCAACTCGAAAGGCGCC....2821.00200000002000000000
........................................................................................................................................................................................................................CAAGAGGAACTTTGACCCCAGTATGACGC..........................................................2921.00200000001100000000
.......................................................................................................................................................................................................................................................................TCGCCCTGAACAGATATCTTCAACTCGA............2821.00200000000110000000
................................................................................................................................................................................................................TTGCCATTCAAGAGGAACTTTGACCCCA...................................................................2821.00200000002000000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCG....................................................................................................................................................................................2521.00200000000020000000
........................................................................................................................................................................................................................................................GAAAATCTCATCAGATCGCCCTGA...............................2431.00300000021000000000
.......................................................................................................................................................................................................................................................................TCGCCCTGAACAGATATCTTCAACTCGAAA..........3021.00200000020000000000
...........................................................................................................CCAGA----ACGCCCAAAGCTCTCCAAAGAAGA...................................................................................................................................................................2921.00200000011000000000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAC..........2421.00200000000000020000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCCAC...................................................................................................................................................................................2621.00200000000000020000
.....................................................................................................................................................................................................................................................................................TATCTTCAACTCGAAAGGCGCCTTCA2621.00200000000000020000
....................................CATGCCATAATA-------------AACTCCGAAGAG......................................................................................................................................................................................................................................2431.00300000001100010000
................................................................................................................................................................................................................TTGCCATTCAAGAGGAACTTTGA........................................................................2331.00300000020100000000
...............................GTAATCATGCCATAATA-------------AACTCCGAAGT.......................................................................................................................................................................................................................................2841.00400000040000000000
...............................................................................................GTAGAATCAGTTCCAGA----ACGC.......................................................................................................................................................................................2121.00200200000000000000
............................................................................................................................................................................................................................AGGAACTTTGACCCCAGTATGACGCT.........................................................2621.00200000000000011000
..........................................................................................................TCCAGA----ACGCCCAAAGCTCTCCAAAGAAGA...................................................................................................................................................................3021.00200000020000000000
......................................................................................................................................................................................................................................................................................ATCTTCAACTCGAAAGGCGC.....2021.00200000000002000000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCA...................................2331.00300000000000030000
............................................................................................GAGGTAGAATCAGTTCCAGA----ACGCCCA....................................................................................................................................................................................2721.00200000000000020000
........................................................................................T-GCGAGGTAGAATCAGTTCCAGA----AC.........................................................................................................................................................................................2521.00200000010010000000
......................................................................................TCT-GCGAGGTAGAATCAGTTCCAGA----A..........................................................................................................................................................................................2621.00200000010000001000
...............................GTAATCATGCCATAATA-------------AACTCCGAAGAG......................................................................................................................................................................................................................................2931.00300000030000000000
............................................................................................................................AGCTCTCCAAAGAAGATCAATGG............................................................................................................................................................2341.00400000022000000000
....................................................................................................................................................................................................................................TGACCCCAGTATGACGCTCGGAAAATC................................................2721.00200000010001000000
..............................................................................................................................................................................................................................................................................GAACAGATATCTTCAACTCGAAAGGCGCC....2921.00200000011000000000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCCAG..................................................................2521.00200000020000000000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATT.......................................................................................2031.00300000000012000000
...........................................................................................................................AAGCTCTCCAAAGAAGATCAATGG............................................................................................................................................................2441.00400010000300000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGACG...........................................................2721.00200000000000020000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATTC......................................................................................2131.00300000000002100000
..............................................................................................................................................................................................................................................ATGACGCTCGGAAAATCTCATCAGATC......................................2721.00200000011000000000
............................................................................................................................................................TTCTTTAAACAGA-CCCATCAACGTC.........................................................................................................................2521.00200000011000000000
................................................................................................................................................................................................................................................................................ACAGATATCTTCAACTCGAAAGGCGC.....2621.00200000010100000000
................................................................................................................................................................................................................................................................................ACAGATATCTTCAACTCGAAAGGCGCC....2721.00200000000100010000
..........................................................................TGCTTAAAGTATTCT-GCGAGGTAGAAT.........................................................................................................................................................................................................2731.00300000000003000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGT.............................................................2521.00200000001001000000
....................................................................................................................................................................................................................................................CTCGGAAAATCTCATCAGATCGCCC..................................2531.00300000010011000000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCCCTGAAC.............................2931.00300000011100000000
...........................................................................................................................................................................................................................GAGGAACTTTGACCCCAGTATGACGCTC........................................................2821.00200000000000020000
..............................................................................................................................................................................................................................................................................GAACAGATATCTTCAACTCGAAAGGC.......2621.00200000001100000000
..............................................................................................GGTAGAATCAGTTCCAGA----...........................................................................................................................................................................................1840.75300000010002000000
.....................................................................................................................................AAGAAGATCAATGGTGCGAGTCTT..................................................................................................................................................2440.75300000000003000000
.................................................................................................................................TCCAAAGAAGATCAAT..............................................................................................................................................................1640.75300000000003000000
..................................ATCATGCCATAATA-------------AACTCCGAAGA.......................................................................................................................................................................................................................................2540.75300000002100000000
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGAGTCTT..................................................................................................................................................2840.75300000010002000000
...........................................................................................................................................................................................................TCCGTTTGCCATTCAAGAGGAACTTTGA........................................................................2830.67200000000110000000
..........................................................................................................................................................................................................................................................AAATCTCATCAGATCGCCCTGAACAGA..........................2730.67200000011000000000
......................................TGCCATAATA-------------AACTCCGAAGAGCTG...................................................................................................................................................................................................................................2530.67200000001100000000
..................................................................................................................................................................................................................................................................TCAGATCGCCCTGAACAGATATCTTC...................2630.67200000000002000000
...................................TCATGCCATAATA-------------AACTCCGAAGAGCT....................................................................................................................................................................................................................................2730.67200000002000000000
.....................................................................................................................................AAGAAGATCAATGGTGCGAGTCTTTT................................................................................................................................................2630.67200000000002000000
.............................................ATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................1630.67200000000002000000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCCC..................................2430.67200100010000000000
.......................................................................................................................................................................................................................................................................TCGCCCTGAACAGATA........................1630.67200000020000000000
..................................................................................................................................................................................................................................................................TCAGATCGCCCTGAACAGATAT.......................2230.67200000010100000000
..............................................................................................................................................................................................................GTTTGCCATTCAAGAGGAACTTTGA........................................................................2530.67200000010001000000
.....................................ATGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................2430.67200000011000000000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGA........................................................................2230.67200000011000000000
...............................................................................................................................................................................................................................................................TCATCAGATCGCCCTGAACAGATAT.......................2530.67200000020000000000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTG.........................................................................2130.67200000002000000000
....................................CATGCCATAATA-------------AACTCCGAAGAGCTGC..................................................................................................................................................................................................................................2830.67200000001000010000
...................................................................................................................................................................................................................................................GCTCGGAAAATCTCATCAGATCGCCC..................................2630.67200000020000000000
...............................................................................................................................................................................................................................................................TCATCAGATCGCCCTGAACAGATA........................2430.67200000000101000000
..........................................................................TGCTTAAAGTATTCT-GCGAGGTAGAA..........................................................................................................................................................................................................2630.67200000010010000000
........................................................................GCTGCTTAAAGTATTCT-GCGAGGTAGAA..........................................................................................................................................................................................................2820.50100000000010000000
.......................................................................................................AGTTCCAGA----ACGCCC.....................................................................................................................................................................................1520.50100000000001000000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGCA......2820.50100000010000000000
...................................................................................................................................................................AACAGA-CCCATCAACGTCAACCAGAC.................................................................................................................2620.50100000001000000000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCCCAGTA................................................................3020.50100000000100000000
..................................................................................................................................................................................................................................TTTGACCCCAGTATGACGCTCA.......................................................2220.50100000000000001000
.............................................................................................AGGTAGAATCAGTTCCAGA----ACGCCT.....................................................................................................................................................................................2520.50100000000000010000
...............................................................................................................................................................TTTAAACAGA-CCCATCAACGTCAACCAGC..................................................................................................................2920.50100000000100000000
..................................................................................................................................................................................................................................................................................AGATATCTTCAACTCGAAAGGCGA.....2420.50100000000001000000
.............................................................................................AGGTAGAATCAGTTCCAGA----ACGC.......................................................................................................................................................................................2320.50100000000000010000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCCAGA.................................................................2620.50100000010000000000
..............................................................................................GGTAGAATCAGTTCCAGA----ACGCCTTT...................................................................................................................................................................................2620.50100000000000010000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCAT............................................2020.50100000000100000000
.....................................................................................................................................................................................................................................................................................TATCTTCAACTCGAAAGGCGCCTTC.2520.50100010000000000000
..................................................................................................................................................................................................................................................CGCTCGGAAAATCTCATCAGATC......................................2320.50100000010000000000
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAA..................................................1620.50100000010000000000
.............................................................................................................................................................................................................................................TATGACGCTCGGAAAATCTCATC...........................................2320.50100000000100000000
..............................................................................................................................................................................................................................................ATGACGCTCGGAAAATCTCATCAGAT.......................................2620.50100000000100000000
.................................................................................................AGAATCAGTTCCAGA----ACGCC......................................................................................................................................................................................2020.50100000000001000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGATAT..........................................................2820.50100000000000010000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGATCGCA...................................2920.50100000000010000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATGC.............................................................2520.50100000000001000000
.............................................................................................................................................................................................................................GGAACTTTGACCCCAGTATGACGCTC........................................................2620.50100000000000010000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATT..............................................................2420.50100000001000000000
......................................................................................................................................................................................................................................................................................ATCTTCAACTCGAAAGGCGCC....2120.50100100000000000000
.........................................................................................................................................................................................................................................CCAGTATGACGCTCGGAA....................................................1820.50100000000001000000
.............................................................................TTAAAGTATTCT-GCGAGGTAGAATCAGT.....................................................................................................................................................................................................2820.50100000000000010000
...................................................................................................................................................................................................................................................................................GATATCTTCAACTCGAAAGGCGCC....2420.50100010000000000000
................................TAATCATGCCATAATA-------------AACTCCGAAGA.......................................................................................................................................................................................................................................2740.50200000001100000000
..........................................................................................................................................................................................................................................CAGTATGACGCTCGGAAAATCTC..............................................2320.50100000010000000000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGA.......2720.50100000010000000000
....................................................................................................................................................................................................................CATTCAAGAGGAACTTTGACCCCAGTATGC.............................................................3020.50100000010000000000
.......................................................................................................AGTTCCAGA----ACGCCCAAAGCTCTCCAAA........................................................................................................................................................................2820.50100000010000000000
....................................................................................................................................AAAGAAGATCAATGGTGCGAGTCTT..................................................................................................................................................2540.50200000000002000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGAC.......................................................................1520.50100000000001000000
..............................................TA-------------AACTCCGAAGAGCTGCTTAAAGTA..........................................................................................................................................................................................................................2620.50100000010000000000
.............................................................................................AGGTAGAATCAGTTCCAGA----ACGCA......................................................................................................................................................................................2420.50100000000000010000
...........................................................................................................................................................................................................................................AGTATGACGCTCGGAAAATCTCATCAGA........................................2820.50100000000010000000
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGAGTC....................................................................................................................................................2640.50200000000002000000
.........................................................................................................................................................................................................................AAGAGGAACTTTGACCCCAGTATC..............................................................2420.50100000000010000000
...............................................................................................................................................................TTTAAACAGA-CCCATCAACGTCAACC.....................................................................................................................2620.50100010000000000000
droSec2
CACGCC------------A----CATTCGATGTAATCATGCCATAATA-------------AACTCCGAAGAGCTGCTTAAGGTATTTT-GCGAGGTAGAATCAGTTCCAGA----ACGCCCAAAGCTCTCCAAAGAAGATCAATGGTGCGAGTCTTTCTTTAAGCAGA-CCCATCAACGTCAACCAGACGGCAGTTATCAAGTCCGTTTGCCATTCAAGAGGAACTTTGACCCCAGTATGACGCTCGGAAAATCTCATCAGATCGCCCTGAACAGATATCTTCAACTCGAAAGGCGCCTTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................TCTTTAAGCAGA-CCCATCAACGTC.........................................................................................................................2435.331612220
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGC.......27133.234231083
......................................TGCCATAATA-------------AACTCCGAAGAGCTGC..................................................................................................................................................................................................................................26152.734138021
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGG........26132.543328050
.............................................................................................................................................................TCTTTAAGCAGA-CCCATCAACGT..........................................................................................................................2331.6753020
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGCTC..............................................................................................................................................................................25131.381817010
....................................................................................................................................................................................................................................TGACCCCAGTATGACGCTCGGAAAA..................................................2531.0033000
......................................TGCCATAATA-------------AACTCCGAAGAGCTG...................................................................................................................................................................................................................................25150.871312001
..............................................................................TAAGGTATTTT-GCGAGGTAGA...........................................................................................................................................................................................................2150.8040040
......................................TGCCATAATA-------------AACTCCGAAGAGCT....................................................................................................................................................................................................................................24150.801212000
............................................................................................................................................................................................................................AGGAACTTTGACCCCAGTATGACGC..........................................................2530.6722000
...............................................................................................................................................................................................................................AACTTTGACCCCAGTATGACGCTCGG......................................................2630.6722000
..............................................................................................................................................................CTTTAAGCAGA-CCCATCAACGTC.........................................................................................................................2330.6722000
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGAGTCT...................................................................................................................................................2780.6354010
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGC................................................................................................................................................................................23130.6287010
.......................................................................................................AGTTCCAGA----ACGCCCAAAGCTCTCC...........................................................................................................................................................................25120.5877000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAA..........24130.5474021
......................................TGCCATAATA-------------AACTCCGAAGAGCTGCT.................................................................................................................................................................................................................................27150.5386101
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGAGTCTT..................................................................................................................................................2880.5043100
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAG.................................................................................................................................................................................22130.4665010
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAA....................................................................................24140.4364110
.............................................................................TTAAGGTATTTT-GCGAGGTAGAT..........................................................................................................................................................................................................2350.4021100
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAG.........25130.3854010
..............................................................................................................................................................................................................................................................................GAACAGATATCTTCAACTCGAAAGG........25130.3855000
.................................................................................................................................................................TAAGCAGA-CCCATCAACGTCAACCAGA..................................................................................................................2730.3310010
...................................................................................................................................................................................................................CCATTCAAGAGGAACTTTGACCCC....................................................................2430.3311000
.................................................................................................................................................................................................................TGCCATTCAAGAGGAACTTTGACCCC....................................................................2630.3311000
..............................................................................................................................................................................................................................GAACTTTGACCCCAGTATGAC............................................................2130.3311000
................................................................................................................................................................................................................................ACTTTGACCCCAGTATGACGCTCGGA.....................................................2630.3311000
...................................................................................................................................................................................................................CCATTCAAGAGGAACTTTGACCCCAG..................................................................2630.3311000
...............................................................................................................................................................TTTAAGCAGA-CCCATCAACGTCAACCAGA..................................................................................................................2930.3311000
.................................................................................................................................................................TAAGCAGA-CCCATCAACGTCAACCAG...................................................................................................................2630.3310010
..........................................................................................................................................................CTTTCTTTAAGCAGA-CCCATCAACGT..........................................................................................................................2630.3310010
................................................................................................................................................TGGTGCGAGTCTTTCTTTAAGC.........................................................................................................................................2230.3311000
.......................................................................................................................................................................................................................................CCCCAGTATGACGCTCGGAAAATCTC..............................................2630.3311000
................................................................................................................................................TGGTGCGAGTCTTTCTTTAAGCAGA-.....................................................................................................................................2530.3311000
.......................................................................................................................................................................................................................................CCCCAGTATGACGCTCGGAAAATCTCA.............................................2730.3311000
..................................................................................................................................................................................................................................TTTGACCCCAGTATGACGCTCGGAAAATC................................................2930.3311000
................................................................................................................................................TGGTGCGAGTCTTTCTTTAAGCAGA-CCCA.................................................................................................................................2930.3311000
..........................................................................................................................................................CTTTCTTTAAGCAGA-CCCATCAACGTCA........................................................................................................................2830.3311000
...................................................................................................................................................TGCGAGTCTTTCTTTAAGCAGA-CCC..................................................................................................................................2530.3311000
...........................................................................................................................................................................................................................GAGGAACTTTGACCCCAGTATGACGCT.........................................................2730.3311000
............................................................................................................................................TCAATGGTGCGAGTCTTTCTTTAAGC.........................................................................................................................................2630.3311000
......................................TGCCATAATA-------------AACTCCGAAGAGC.....................................................................................................................................................................................................................................23150.3353200
.............................................................................................................................................................TCTTTAAGCAGA-CCCATCAACGTCAA.......................................................................................................................2630.3310001
..........................................................................................................................................................CTTTCTTTAAGCAGA-CCCATCAACGTC.........................................................................................................................2730.3311000
...................................................................................................................................................................AGCAGA-CCCATCAACGTCAAC......................................................................................................................2130.3311000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGCG......28130.3144000
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGCT...............................................................................................................................................................................24130.3142011
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAAGA..................................................................................26140.2943001
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAAG...................................................................................25140.2944000
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGAGTC....................................................................................................................................................2680.2522000
.......................................................................................................AGTTCCAGA----ACGCCCAAAGCTCT.............................................................................................................................................................................23120.2532001
.......................................................................................................AGTTCCAGA----ACGCCCAAAGCTCTC............................................................................................................................................................................24120.2533000
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCA.....................................................................................23140.2133000
...............................................................................AAGGTATTTT-GCGAGGTAGAATC........................................................................................................................................................................................................2350.2011000
.............................................................................TTAAGGTATTTT-GCGAGGTAG............................................................................................................................................................................................................2150.2011000
CACGCC------------A----CATTCGATGTAATC..........................................................................................................................................................................................................................................................................2150.2011000
..............................................................................TAAGGTATTTT-GCGAGGTAGAATC........................................................................................................................................................................................................2450.2010100
.....C------------A----CATTCGATGTAATCATGCCATAATA-------------..................................................................................................................................................................................................................................................2750.2011000
..............................................................................TAAGGTATTTT-GCGAGGTAGAA..........................................................................................................................................................................................................2250.2011000
.............................................................................TTAAGGTATTTT-GCGAGGTAGT...........................................................................................................................................................................................................2250.2011000
.....................................................................................TTTT-GCGAGGTAGAATCAGTTCCAGA----A..........................................................................................................................................................................................2750.2010010
......................................TGCCATAATA-------------AACTCCGAAGAGCTGT..................................................................................................................................................................................................................................26150.2033000
..............................................................................TAAGGTATTTT-GCGAGGTAGAATCAGT.....................................................................................................................................................................................................2750.2010010
.............................................................................TTAAGGTATTTT-GCGAGGTAGAA..........................................................................................................................................................................................................2350.2011000
..............................................................................TAAGGTATTTT-GCGAGGTAGAATCAG......................................................................................................................................................................................................2650.2011000
....CC------------A----CATTCGATGTAATCATGCT.....................................................................................................................................................................................................................................................................2250.2010010
.......................................GCCATAATA-------------AACTCCGAAGAGCTGC..................................................................................................................................................................................................................................25150.2033000
..............................................................................TAAGGTATTTT-GCGAGGTAGT...........................................................................................................................................................................................................2150.2010010
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGCTCT.............................................................................................................................................................................26120.1722000
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGCTCTC............................................................................................................................................................................27120.1722000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGA............22130.1520020
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTC......................................................................................22140.1422000
.......................................................................................................................................GAAGATCAATGGTGCGAGTCTTTCT...............................................................................................................................................2580.1311000
.........................................................................................................................................AGATCAATGGTGCGAGTCTTTCTT..............................................................................................................................................2480.1311000
.......................................................................................................................................GAAGATCAATGGTGCGAGTCTTTCTT..............................................................................................................................................2680.1311000
.......................................................................................................................................GAAGATCAATGGTGCGAGTCTT..................................................................................................................................................2290.1110010
.............................................................................................................................................................................................................CGTTTGCCATTCAAGAGGAACTTTGA........................................................................26100.1011000
..........................................................................................................................................................................CCCATCAACGTCAACCAGACGGC..............................................................................................................23110.0911000
......................................................................................................................................................................................AACCAGACGGCAGTTATCAAGTCCGT...............................................................................................26110.0910010
.......................................................................................................................................................................GA-CCCATCAACGTCAACCAGACGG...............................................................................................................24110.0911000
..........................................................................................................................................................................CCCATCAACGTCAACCAGACGGCAGT...........................................................................................................26110.0910010
.................................................................................................................................TCCAAAGAAGATCAATGGTGCGA.......................................................................................................................................................23120.0810010
.......................................................................................................AGTTCCAGA----ACGCCCAAAGCTCTCT...........................................................................................................................................................................25120.0811000
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGCTCTT............................................................................................................................................................................27120.0811000
..........................................................................................................................................................................................AGACGGCAGTTATCAAGTCCGTT..............................................................................................23120.0811000
......................................................................................................................................................................................................................................................................................ATCTTCAACTCGAAAGGCGCCTTC.24130.0811000
.................................................................................................AGAATCAGTTCCAGA----ACGCCC.....................................................................................................................................................................................21130.0811000
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAA...........23130.0811000
........................................................................................................................................................................................................AAGTCCGTTTGCCATTCAAGAGGAAC.............................................................................26130.0811000
....................................................................................................ATCAGTTCCAGA----ACGCCCAA...................................................................................................................................................................................20130.0810010
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGT........26130.0811000
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGCTT..............................................................................................................................................................................25130.0810010
.............................................................................................................................................................................................................................................................................TGAACAGATATCTTCAACTCGAAAGGA.......27130.0811000
........................................................................................................................................................................................................................................................................................CTTCAACTCGAAAGGCGCCTT..21130.0811000
....................................................................................................ATCAGTTCCAGA----ACGCCCAAAGT................................................................................................................................................................................23130.0811000
.................................................................................................................................................................................................................................................................ATCAGATCGCCCTGAACAGATATCTTC...................27130.0811000
.....................................................................................................TCAGTTCCAGA----ACGCCCAAAGCTC..............................................................................................................................................................................24130.0811000
...............................................................................................................................................................................................................................................................................AACAGATATCTTCAACTCGAAAGG........24130.0811000
...................................................................................................................................CAAAGAAGATCAATGGTGCGA.......................................................................................................................................................21130.0810010
...................................................................................................................................................................................................................................................................................GATATCTTCAACTCGAAAGGC.......21130.0811000
......................................................................................................CAGTTCCAGA----ACGCCCAAAGCTC..............................................................................................................................................................................23130.0811000
................................................................................................................................................................................................................................................GACGCTCGGAAAATCTCATCAGATC......................................25140.0711000
...................................................................................................................................................................................................................................................GCTCGGAAAATCTCATCAGATCG.....................................23140.0711000
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATT.......................................................................................21140.0711000
..................................................................................................................................................................................................................................................CGCTCGGAAAATCTCATCAGATCGCCC..................................27140.0711000
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAAGAGT................................................................................28140.0711000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATTCAA....................................................................................23140.0711000
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAAGAG.................................................................................27140.0711000
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAAGAGA................................................................................28140.0711000
.................................................................................................................................................................................................................................................ACGCTCGGAAAATCTCATCAGATC......................................24140.0711000
....................................................................................................................................................................................................................................................CTCGGAAAATCTCATCAGATCG.....................................22140.0711000
...................................................................................................................................................................................................TTATCAAGTCCGTTTGCCATTCAT....................................................................................24140.0711000
...............................................................................................................................................................................................................................................TGACGCTCGGAAAATCTCATCAGATCGC....................................28140.0711000
.....................................................................................................................................................................................................................................................TCGGAAAATCTCATCAGATCGCC...................................23140.0711000
....................................................................................................................................................................................................TATCAAGTCCGTTTGCCATTCAAGAGG................................................................................27140.0711000
..........................................................................................................................................................................................................................................................AAATCTCATCAGATCGCCCTGAACAGA..........................27140.0711000
......................................TGCCATAATA-------------AACTCCGAAGAGCTGCA.................................................................................................................................................................................................................................27150.0711000
..............................................TA-------------AACTCCGAAGAGCTGCTT................................................................................................................................................................................................................................20150.0711000
.........................................CATAATA-------------AACTCCGAAGAGCTGC..................................................................................................................................................................................................................................23150.0711000
........................................CCATAATA-------------AACTCCGAAGAGCTGCT.................................................................................................................................................................................................................................25150.0711000
.......................................GCCATAATA-------------AACTCCGAAGAGCTG...................................................................................................................................................................................................................................24150.0711000
........................................CCATAATA-------------AACTCCGAAGAGCTG...................................................................................................................................................................................................................................23150.0711000
......................................TGCCATAATA-------------AACTCCGAAGAGCTGA..................................................................................................................................................................................................................................26150.0711000
......................................TGCCATAATA-------------AACTCCGAAGAGCTA...................................................................................................................................................................................................................................25150.0710010
......................................TGCCATAATA-------------AACTCCGAAGAGCCT...................................................................................................................................................................................................................................25150.0711000
......................................TGCCATAATA-------------AACTCCGAAG........................................................................................................................................................................................................................................20150.0711000
droYak3
CAAACG------------GTCACCGTTCGCTGTAATGTAACAAATCTCGACAATATGGTGC-------------------AGAAGTTCT-TTAAATTGGATCAAGTTCCAACTGAAC-G---CCAGCTCACTCCTGAAGAACAGTGGTGCGAACAACATTTTGTGCAAA-CCCATGTTAAACAGCCCAACGGAAAGTACATGGCTCGATTGCCTTTCAAAACATTGTTCGACCCTTCACAAGTTTTAGGTCAATCCAGACAGAA-TCATTGAATCGCTTTCACGCCTTGGAACGGAAACTTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AC---------------------------------------------------------------------------------------------------------------------------------TCCAGAGGAATAATAGTGTGAAGAACATTTTGTGGATA-CCCATGTTCGTCAACTAAACGGAAAATACGTGGTCCGC-TGCCGTTAAAAACTACATATGATCCTTCTCAAGTTCTCGGAAGATCCAGACAGATCGGCATAAATCGTTTTTA---------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:28 AM