ID:

dps_197

 Coordinate:

Unknown_group_46:8918-8971 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4 -18.3 -18.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy4-I_Dmoj-intLTRGypsy-
mature
  1. dps_197  Unknown_group_46:8946-8970 +
  2. Unknown_group_412:3883-3907 +
  3. Unknown_group_664:816-840 -
star

Sense Strand Reads

GGCAATGGTCCGGGCAATGGTCCAATGGTCGGCGCAGACGATGTCCAATGGTACTTGGGCTTGCATCTTTCCTCCTGGTTTGGTTTGGCTTACCTTGTACTGCTGGCACTTGGCGCACTGCCTCATATATCGGGCGATATCTGCCGTGTGAAGC
************************************..(((.(((((.((((((..(((((...(((...((....))...)))..)))...))..)))))).))).)))))......************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 M022
male body		 V112
male body		 GSM343916
embryo
 M062
head
..............................................................................TTTGGTTTGGCTTACCTTGTACTGC................................................... 25 0 3 42.33 127 61 52 5 5 0 2 1 1
..............................................................................TTTGGTTTGGCTTACCTTGTACTG.................................................... 24 0 3 20.33 61 46 13 0 1 0 1 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACTGCTG................................................. 27 0 3 10.67 32 26 6 0 0 0 0 0 0
.............................................................................................................TTGGCGCACTGCCTCATATATCGGGC................... 26 0 1 10.00 10 8 0 0 0 2 0 0 0
.................................................................................................................................TCGGTCCCTATCTGCCGTG...... 19 3 10 7.20 72 72 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACT..................................................... 23 0 3 5.67 17 16 0 1 0 0 0 0 0
................ATGGTCCAATGGTCGGCGCAGACGATG............................................................................................................... 27 0 1 4.00 4 2 2 0 0 0 0 0 0
..CAATGGTCCGGGCAATGGTCCAATGG.............................................................................................................................. 26 0 1 4.00 4 2 2 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACTGCT.................................................. 26 0 3 4.00 12 12 0 0 0 0 0 0 0
...............................................................................TTGGTTTGGCTTACCTTGTACTGC................................................... 24 0 3 3.67 11 11 0 0 0 0 0 0 0
....................TCCAATGGTCGGCGCAGACGATGTCC............................................................................................................ 26 0 1 3.00 3 3 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTAC...................................................... 22 0 3 3.00 9 8 0 0 0 0 0 1 0
......................................................................................................................TGCCTCATATATCGGGCGATATCT............ 24 0 1 3.00 3 0 3 0 0 0 0 0 0
..............................................................................................................TGGCGCACTGCCTCATATATCGGGC................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0
....................TCCAATGGTCGGCGCAGACGATG............................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
............................TCGGCGCAGACGATGTCCAATGGTACT................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................TACTTGGGCTTGCATCTTTCCTCC............................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
........TCCGGGCAATGGTCCAATGGTCGGCGCA...................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0
............................TCGGCGCAGACGATGTCCAATGGTAC.................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................TGGTCGGCGCAGACGATGTCCAATGG....................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.................TGGTCCAATGGTCGGCGCAGACGATG............................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0
...................................................TACTTGGGCTTGCATCTTTCCTC................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................TTGGTTTGGCTTACCTTGTACTG.................................................... 23 0 3 1.33 4 4 0 0 0 0 0 0 0
...............................................................................TTGGTTTGGCTTACCTTGTACTGCTG................................................. 26 0 3 1.00 3 3 0 0 0 0 0 0 0
......................................................................................................................TGCCTCATATATCGGGCGATATCTGCCG........ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................TATCGGGCGATATCTGCCGTG...... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..CAATGGTCCGGGCAATGGTC.................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................TGGGCTTGCATCTTTCCTCCTGG............................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................GCGCACTGCCTCATATATCGGGCGAT................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................TACTTGGGCTTGCATCTTTCCTCT............................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................TGCTGGCACTTGGCGCACTGCCT............................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................TCCAATGGTACTTGGGCTTGCATCTT..................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..............CAATGGTCCAATGGTCGGCGCAG..................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
....................TCCAATGGTCGGCGCAGACGATGTCCA........................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
....................TCCAATGGTCGGCGCAGACGATGTCCAA.......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
..CAATGGTCCGGGCAATGGTCC................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................TGCCTCATATATCGGGCGATATCTG........... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................TTGGGCTTGCATCTTTCCTCCTGG............................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....TGGTCCGGGCAATGGTCCAATGG.............................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.................TGGTCCAATGGTCGGCGCAGAC................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................GTACTTGGGCTTGCATCTTTCCTCC............................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
...................GTCCAATGGTCGGCGCAGACGAT................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................TGGCGCACTGCCTCATATATCGGGCG.................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..CAATGGTCCGGGCAATGGTCCAATGGA............................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0
....................TCCAATGGTCGGCGCAGAC................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........CCGGGCAATGGTCCAATGGTCGGCGC....................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................TGGTCGGCGCAGACGATGTCCAATG........................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...AATGGTCCGGGCAATGGTCCAATGG.............................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................TGCCTCATATATCGGGCGATATCTGC.......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...CAATGTCCGGGCAATGGTCCAATGG.............................................................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTAACCTTGTATTGC................................................... 25 2 4 1.00 4 4 0 0 0 0 0 0 0
..............................................................................................................TGGTGCACTGCCTCATATATCGGG.................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0
...AATGGTCCGGGCAATGGTCC................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................TCCAATGGTACTTGGGCTTGCATCT...................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................TACTTGGGCTTGCATCTTTCCT................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..CAATGGTCCGGGCAATGGTCCAATG............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................GCACTTGGCGCACTGCCTCATATAT........................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................GGTACTTGGGCTTGCATCTTTCCT................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................TTGGCGCACTGCCTCACATATCGGGCG.................. 27 1 1 1.00 1 0 0 0 0 0 1 0 0
.......................................................................................................................GCCTCATATATCGGGCGATATCTGCCG........ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................TGTCCAATGGTACTTGGGCTTG........................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..CAATGGTCCGGGCAATGGT..................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................GGCGCACTGCCTCATATATCGGGCGAT................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................ACTTGGGCTTGCATCTTTCCTCCTG............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.................TGGTCCAATGGTCGGCGCAGACG.................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACTCTGTACTG.................................................... 24 2 4 0.75 3 0 3 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCATGTACTGCTG................................................. 27 1 3 0.67 2 0 0 0 2 0 0 0 0
................................................................................TGGTTTGGCTTACCTTGTACTGCTG................................................. 25 0 3 0.67 2 2 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTA....................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.........................................................................................TTACCTTGTACTGCTGGCACTTGGCGCA..................................... 28 0 3 0.67 2 0 2 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCATGTACTGC................................................... 25 1 3 0.67 2 0 0 0 2 0 0 0 0
.................................................................TCTTTCCTCATGGTTTGGTTTGGCT................................................................ 25 1 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTAACCTTGTATTG.................................................... 24 2 4 0.50 2 2 0 0 0 0 0 0 0
...............................................................................TTGGTTTGGCTTACCTTGTAC...................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACTGT................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACA..................................................... 23 1 3 0.33 1 0 0 0 1 0 0 0 0
................................................................................TGGTTTGGCTTACCTTGTACTG.................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................TTGGCTTACCTTGTACTGCTG................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACC..................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACTGTTT................................................. 27 2 3 0.33 1 0 0 1 0 0 0 0 0
.............................................................................CTTTGGTTTGGCTTACCTTGTACTG.................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACTAC................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................TTGGTTTGGCTTACCTTGTACT..................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTAGCTTACCTTGTACTGCTG................................................. 27 1 3 0.33 1 0 1 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCATGTA....................................................... 21 1 3 0.33 1 0 0 0 1 0 0 0 0
..............................................................................TTTGGTTTGGCTTACCTTGTACTGCTGG................................................ 28 0 3 0.33 1 1 0 0 0 0 0 0 0
............................TCGGCGCAGACGATGTCCAATGG....................................................................................................... 23 0 10 0.30 3 1 2 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTTACTTTGTACTGC................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCCTACCTTGTAC...................................................... 22 1 4 0.25 1 0 0 1 0 0 0 0 0
.............................................................................................CTTGTACTGCTGTCACTTGGCGC...................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0
...............................................................................................TGTACTGCTGGCACTTGGCGCAC.................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0
............................TCGGCGCAGACGATGTCCAATGGT...................................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0
............................TCGGCGCAGACGATGTCCAATG........................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................................TTTGGTTTGGCTCACCTTGTACTGCTG................................................. 27 1 10 0.10 1 1 0 0 0 0 0 0 0
...........................GTCGGCGCAGACGATGTCCAATGG....................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................CTTGTACAACTGCCACTTGGC........................................ 21 3 12 0.08 1 1 0 0 0 0 0 0 0
............................................................................GGTTTGGTTGGGCTTACT............................................................ 18 2 12 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................ACTGGTGGCCCTTGGCGC...................................... 18 2 18 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................CTGCGGGCGCTTGGCGAACT................................... 20 3 19 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCGTTACCAGGCCCGTTACCAGGTTACCAGCCGCGTCTGCTACAGGTTACCATGAACCCGAACGTAGAAAGGAGGACCAAACCAAACCGAATGGAACATGACGACCGTGAACCGCGTGACGGAGTATATAGCCCGCTATAGACGGCACACTTCG
************************************..(((.(((((.((((((..(((((...(((...((....))...)))..)))...))..)))))).))).)))))......************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 GSM343916
embryo
 GSM444067
head
 V112
male body		 SRR902011
testis
.................................................................AGAAAGGAGGACCAAACCAAACC.................................................................. 23 0 3 3.33 10 10 0 0 0 0 0
...............................CGCGTCTGCTACAGGTTACCATGAAC................................................................................................. 26 0 1 3.00 3 0 3 0 0 0 0
...............................................................GTAGAAAGGAGGACCAAACCAAACC.................................................................. 25 0 3 3.00 9 8 0 0 0 1 0
...........CCCGTTACCAGGTTACCAGCCGCGT...................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
..GTTACCAGGCCCGTTACCAGGTT................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0
..............GTTACCAGGTTACCAGCCGCGT...................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0
.............................GCCGCGTCTGCTACAGGTTACCAT..................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0
.........................ACCAGCCGCGTCTGCTACAGGTTACCAT..................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................GAACCGCGTGACGGAGTATATAGCCCG................... 27 0 1 1.00 1 1 0 0 0 0 0
..........GCTCGTTACCAGGGTACCAGC........................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..................CCAGGTTACCAGCCGCGT...................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
............ATGTTACCAGGTTACCAGCCGCGT...................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
......................GTTACCAGCCGCGTCTGCTACAGGT........................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
................................GCGTCTGCTACAGGTTACCATGAAC................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
..................................GTCTGCTACAGGTTACCAT..................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
..................................................................GAAAGGAGGACCAAACCAAACC.................................................................. 22 0 3 0.67 2 2 0 0 0 0 0
................................................................TAGAAAGGAGGACCAAACCAAACC.................................................................. 24 0 3 0.67 2 2 0 0 0 0 0
..............................................................CGTAGAAAGGAGGACCAAACCAAACC.................................................................. 26 0 3 0.67 2 2 0 0 0 0 0
.................................................................AGAAAGGAGTACCAAACCAAACC.................................................................. 23 1 3 0.33 1 1 0 0 0 0 0
...............................................................GTAGAAAGGAGGACCAAACCAAAC................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
.................................................................AGAAGGGAGGACCAAACCAAACCGAT............................................................... 26 2 13 0.23 3 0 0 0 0 0 3
...........................................................................................TGGAACATGACGACAGTGAACCGCGT..................................... 26 1 6 0.17 1 1 0 0 0 0 0
.............................................................................................GAACATGACGACCGTGAACCGCGT..................................... 24 0 6 0.17 1 0 0 1 0 0 0
............................................................................................TGAACATGACGACCGTGAACCGCGT..................................... 25 1 6 0.17 1 1 0 0 0 0 0
...........................CAGCCGCGTCTGCTACAGGTTACCA...................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0
...........................CAGCCGCGTCTGCTACAGGTT.......................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0
.................................................................AGAAGGGAGGACCAAACCAAACC.................................................................. 23 1 14 0.07 1 1 0 0 0 0 0
..............................................................CGTAGAAGGGAGGACCAAACCAAACC.................................................................. 26 1 14 0.07 1 1 0 0 0 0 0
................................................................TAGAAGGGAGGACCAAACCAAACC.................................................................. 24 1 14 0.07 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_46:8868-9021 + dps_197 GGCAAT-------------GGTCCGGGCAATGGTCCAAT--GGTCGGCGCAGACGATGTCCAATGGT---------ACTTGGGCTTGCATC-TTTCCTCCTGGTTTGGTTTGGCTTACCTTGTACTGCTGGCACTTGGCGCACTGCCTCATATATCGGGCGATATCTGCCGTGT--GAAGC
droPer2 scaffold_64:65699-65852 - GGCAAT-------------GGTCCGGGCAATGGTCCAAT--GGTCGGCGCAGACGATGTCCAATGGT---------ACTTGGGCTTGCATC-TTTCCTCCTGGTTTGGTTTGGCTTACCTTGTACTGCTGGCAATTGGCGCACTGCCGGATATATCGGGCGATATCTGCCGTGT--GAAGC
droWil2 scf2_1100000004953:1205310-1205459 - GGCAAT-------------------------GGCCCCACAAAGTCAGCGCATACTATGGCCCATGGTTCTTCCGGTATTTGTGTTAGCATT-TTTCCTGCTGCTTGTTGTTGACTGGGTTTGTATTGTTGGCATATTGTGCACTTTCCCACAAACGTCCTGATATCT---CGTT--GCATT
droVir3 scaffold_12929:104676-104813 + GGAAGC-------------------------GGCCCCACGAAATCTGCGCATAATGTTGCCCATGGTTCC------------GTCAGCATT-CGTCCTGCGGGTCCCACCTGTTCCACCTTGAACTTCTGACACACCTCACAGCACCTCACATGTCGTGCAGCGTCC---CGGA--ACATT
droMoj3 scaffold_6093:2910-3072 + GTCGCG-------------GATCGAGGCAAAGGTCCCACGAAATCCGCGCACAGGACTGCCATCGGCTCCGCTACCTGCCTGGTCAGCATC-TGTCCGGCCGGCTTCTGTTGTACGCCCTTGAATTTCTGGCACGTCTCGCAGCGCTTCACGTAACGAGCGGCATCT---CGGG-ACATAC
droGri2 scaffold_15057:56601-56752 + GGTAGT-------------------------GGTCCCACGAAGTCAGCACAAACTGTGGTCCAGGGTTCCTCCGGTGTCTTGGTCATCATT-TGTCCTGACGCGGCCATTTGACTTGGGTTATACTGCTGACATATTTCGCATTGTTGGACATATGCACGTACGTCT---CTGTATAAGTC
droAna3 scaffold_13339:2675091-2675240 - GGCAAT-------------------------GGTCCCACGAAGTCCGTACATACCGTCGCCCACGGCTCCTCTGGGACCTGTGTCAGCATT-TTCCCTGCGGCCTGCATCTGGCTTGGTTTATACCGCATGCATGTCTCGCACTTCCTGACATAGTTCCTTACGTCC---CTTT--GCATC
droBip1 scf7180000392000:24361-24510 + GGCAAT-------------------------GGACCTACAAAGTCCGCGCATGCCGTTGCCCATGGCTCTTCCGGGACCTGTGACGGCATC-TATCCTGCCATTTGCATCTGGCTCGGCTTGTACTTCAGGCACGTGTCGCACCTCCTGACATATTTTCGGATGACC---CTCG--GCATC
droKik1 scf7180000301448:1004-1151 + GGAAAT-------------------------GGGCCCATGAATTCCGCACATACTACGCTGAATGGTTCATCGTCTTGGCGGATGTTCA---CGGCCGGCGGGTTTAAGTTGGCTTACCTTGTATTTTTGGCAGGTGGGGCACCGGCGTACGTACTTGGTGACTTCC---CTGA--AAAGT
droFic1 scf7180000449650:2309-2458 + GGCAAA-------------------------GGACCTACAAGGTCCGCACAGAGGATGTCGAAGGGCTCACTTACGAACCGGGTTAGCATT-TTCCCTGCGGCTTTGGTCTGAACGGCCTTGAACTTCTGGCAGGGCTCGCAGCGCCGCACATGGTGTTTAGCGTCG---CGGT--ACATG
droEle1 scf7180000486598:17047-17197 - GGAAGG-------------------------GGTCCAACGAAATCGGCTACGACGAGCGCGAACGGCTCCGTAGGTTGGCGAGTGAGCATC-TTGCCAGCTGGTTTACGCTGGCTAACCTTGTACTGTTGGCAGGTCACACAGATAGTGACATACCGTACCACGTCC---CGGT-TGAAGT
droRho1 scf7180000778784:20544-20693 + GGAAGG-------------------------GGTCCAATAAAATCGGCGCAGACGGTGTCAAAGGGTTCACTGATCGGCCTGGTAAACCTC-TTACCCGCTGGTTTGTTTTGGCTTACCTTGAACCGTTGGCAAGTGTCACACTTACGAACATAACTGGCTACATCA---CGAA--AGAGT
droBia1 scf7180000301321:11286-11424 + GGAAGG-------------------------GGCCCAATAAAATCGGCGCAGACAGTATCGAATCCGTC-----------TGGTGAACATT-TTACCCGCCGGTTTGGTTTGGCTGACTTTGAACCGTTGGCAAGTGTCACACTTGCGGACATACCTGGCAATATCG---CGGA--AAAGA
droTak1 scf7180000413476:236-386 - GGAAGG-------------------------GGTCCAATGAAGTCGGCGCAGATAGTGTCAAAGGGCTCACTGATCTGCCTGGTGAACATC-TTACCCGCTGGTTTGTTTTGGCTTACCTTGAACTGTTGACAAGTGTCGCACTTGCGAACATACCGGGCTACATCA---CGAA-AGAGTC
droEug1 scf7180000407357:8430-8579 + GGAAGG-------------------------GGCCCAATAAAATCGGCGCAGACAGTATCGACTGGCTTGTTAATCTGTCTGGTGAACATT-TTACCCGCCGGTTTGGTTTGGCTGACTTTGAACCGTTGGCAAGTGTCACGCTTGCGGACATACCTGGCAATATCG---CGGA--AAAGA
dm3 chr2R:761182-761331 - AGCAAG-------------------------GGGC-CACGAAATCTGCGCACACGGTTGCCCATGCTTCTACCGGCTCCTGTGTTAACCTTTTCTTCGGCCGCCTGTAGCTGGCTGGGTTTGTACTTCATGCATCTCTCGCAGTTTCGCACGTACTTTCTTATGTCT---CGAT--GCATT
droSim2 node_7611:185-334 + GGCAAC-------------------------GGGCCCACGAAGTCCGCGCACACGGTTACCCATGGTTCTTCCGGCACCTGTGTTAACATC-TTCCCGGCCGCCTGTAGCTGGCTGGACTTGTACTTCATGCAGCTCTCGCAGTTTCGCATATACTTCCTTATGTCC---CGAT--GCATT
droSec2 scaffold_1549:1849-1998 + GGCAGG-------------------------GGGCCCACGAAGTCTGCGCACACGGTTGCCCATGGTTCTTCCGGCACCTGTGTTAACATC-TTCCCGGCCGCCTGTAGCTGGCTGGACTTGTACTTCATGCACCTCTCGCAGTTTCGTACATACTTCCTTATGTCC---CGAT--GCATT
droYak3 v2_chr2L_random_010:482390-482529 - GGCAAG-------------------------GGGCCCACAAAGTCCGCACATACGGTGGCCCATGGTTC----------TGTGTCAGCATT-TTCCCGGCTGCTTGCAGCTGGTTGGGCTTGTATCTCATGCAGCTCTCGCAGTTCCTCACGTATTTCCTGACGTCT---CGGT--GCATT
droEre2 scaffold_4856:97276-97450 - GACCAGCAGCATCGAATTCGTCCGTGGCAATGGTCCCACGAAATCCGCACACACGGTGGCCCATGGCTCCTCCGGCACCTAGGTCTGTATT-TTCCCGGCTGCCTGTAGTTGGTTCGGCTTATACTTCATGCAGCTTTCGCAGCTCCGCACATATTTCCGTGTGTCC---CGGT--GCATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGCAAT-------------GGTCCGGGCAATGGTCCAAT--GGTCGGCGCAGACGATGTCCAATGGT---------ACTTGGGCTTGCATC-TTTCCTCCTGGTTTGGTTTGGCTTACCTTGTACTGCTGGCACTTGGCGCACTGCCTCATATATCGGGCGATATCTGCCGTGT--GAAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGC.....................................................25342.33127061511025250
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTG......................................................24320.3361046000011310
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGCTG...................................................27310.673202600000600
......................................................................................................................................TTGGCGCACTGCCTCATATATCGGGC.....................26110.00102800000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACT.......................................................2335.671701610000000
.............................ATGGTCCAAT--GGTCGGCGCAGACGATG...........................................................................................................................2714.0040200000200
..CAAT-------------GGTCCGGGCAATGGTCCAAT--GG..........................................................................................................................................2614.0040200000200
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGCT....................................................2634.001201200000000
........................................................................................................TTGGTTTGGCTTACCTTGTACTGC.....................................................2433.671101100000000
.................................TCCAAT--GGTCGGCGCAGACGATGTCC........................................................................................................................2613.0030300000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTAC........................................................2233.0090800100000
...............................................................................................................................................TGCCTCATATATCGGGCGATATCT..............2413.0030000000300
.......................................................................................................................................TGGCGCACTGCCTCATATATCGGGC.....................2512.0020110000000
.................................TCCAAT--GGTCGGCGCAGACGATG...........................................................................................................................2312.0020200000000
...........................................TCGGCGCAGACGATGTCCAATGGT---------ACT......................................................................................................2712.0020200000000
..................................................................T---------ACTTGGGCTTGCATC-TTTCCTCC.................................................................................2412.0020200000000
.....................TCCGGGCAATGGTCCAAT--GGTCGGCGCA..................................................................................................................................2812.0020200000000
...........................................TCGGCGCAGACGATGTCCAATGGT---------AC.......................................................................................................2612.0020200000000
......................................T--GGTCGGCGCAGACGATGTCCAATGG...................................................................................................................2612.0020200000000
..............................TGGTCCAAT--GGTCGGCGCAGACGATG...........................................................................................................................2612.0020100000100
..................................................................T---------ACTTGGGCTTGCATC-TTTCCTC..................................................................................2312.0020200000000
........................................................................................................TTGGTTTGGCTTACCTTGTACTG......................................................2331.3340400000000
........................................................................................................TTGGTTTGGCTTACCTTGTACTGCTG...................................................2631.0030300000000
...............................................................................................................................................TGCCTCATATATCGGGCGATATCTGCCG..........2811.0010100000000
........................................................................................................................................................TATCGGGCGATATCTGCCGTG........2111.0010100000000
..CAAT-------------GGTCCGGGCAATGGTC..................................................................................................................................................2011.0010100000000
...............................................................................TGGGCTTGCATC-TTTCCTCCTGG..............................................................................2311.0010100000000
.........................................................................................................................................GCGCACTGCCTCATATATCGGGCGAT..................2611.0010100000000
..................................................................T---------ACTTGGGCTTGCATC-TTTCCTCT.................................................................................2411.0010100000000
.............................................................................................................................TGCTGGCACTTGGCGCACTGCCT.................................2311.0010100000000
..........................................................TCCAATGGT---------ACTTGGGCTTGCATC-TT.......................................................................................2611.0010100000000
...........................CAATGGTCCAAT--GGTCGGCGCAG.................................................................................................................................2311.0010000000100
.................................TCCAAT--GGTCGGCGCAGACGATGTCCA.......................................................................................................................2711.0010100000000
.................................TCCAAT--GGTCGGCGCAGACGATGTCCAA......................................................................................................................2811.0010100000000
..CAAT-------------GGTCCGGGCAATGGTCC.................................................................................................................................................2111.0010100000000
...............................................................................................................................................TGCCTCATATATCGGGCGATATCTG.............2511.0010000000100
..............................................................................TTGGGCTTGCATC-TTTCCTCCTGG..............................................................................2411.0010100000000
.....T-------------GGTCCGGGCAATGGTCCAAT--GG..........................................................................................................................................2311.0010100000000
..............................TGGTCCAAT--GGTCGGCGCAGAC...............................................................................................................................2211.0010100000000
.................................................................GT---------ACTTGGGCTTGCATC-TTTCCTCC.................................................................................2511.0010010000000
................................GTCCAAT--GGTCGGCGCAGACGAT............................................................................................................................2311.0010100000000
.......................................................................................................................................TGGCGCACTGCCTCATATATCGGGCG....................2611.0010100000000
..CAAT-------------GGTCCGGGCAATGGTCCAAT--GGA.........................................................................................................................................2711.0010100000000
.................................TCCAAT--GGTCGGCGCAGAC...............................................................................................................................1911.0010100000000
......................CCGGGCAATGGTCCAAT--GGTCGGCGC...................................................................................................................................2611.0010100000000
......................................T--GGTCGGCGCAGACGATGTCCAATG....................................................................................................................2511.0010100000000
...AAT-------------GGTCCGGGCAATGGTCCAAT--GG..........................................................................................................................................2511.0010100000000
...............................................................................................................................................TGCCTCATATATCGGGCGATATCTGC............2611.0010100000000
...AAT-------------GGTCCGGGCAATGGTCC.................................................................................................................................................2011.0010100000000
..........................................................TCCAATGGT---------ACTTGGGCTTGCATC-T........................................................................................2511.0010100000000
..................................................................T---------ACTTGGGCTTGCATC-TTTCCT...................................................................................2211.0010100000000
..CAAT-------------GGTCCGGGCAATGGTCCAAT--G...........................................................................................................................................2511.0010100000000
..................................................................................................................................GCACTTGGCGCACTGCCTCATATAT..........................2511.0010100000000
................................................................GGT---------ACTTGGGCTTGCATC-TTTCCT...................................................................................2411.0010100000000
................................................................................................................................................GCCTCATATATCGGGCGATATCTGCCG..........2711.0010100000000
........................................................TGTCCAATGGT---------ACTTGGGCTTG..............................................................................................2211.0010100000000
..CAAT-------------GGTCCGGGCAATGGT...................................................................................................................................................1911.0010100000000
........................................................................................................................................GGCGCACTGCCTCATATATCGGGCGAT..................2711.0010100000000
............................................................................ACTTGGGCTTGCATC-TTTCCTCCTG...............................................................................2511.0010100000000
..............................TGGTCCAAT--GGTCGGCGCAGACG..............................................................................................................................2311.0010100000000
.........................................................................................................TGGTTTGGCTTACCTTGTACTGCTG...................................................2530.6720200000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTA.........................................................2130.6720200000000
..................................................................................................................TTACCTTGTACTGCTGGCACTTGGCGCA.......................................2830.6720000000200
........................................................................................................TTGGTTTGGCTTACCTTGTAC........................................................2130.3310100000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGT.....................................................2530.3310100000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACA.......................................................2330.3310000000010
.........................................................................................................TGGTTTGGCTTACCTTGTACTG......................................................2230.3310100000000
.............................................................................................................TTGGCTTACCTTGTACTGCTG...................................................2130.3310100000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACC.......................................................2330.3310010000000
........................................................................................................TTGGTTTGGCTTACCTTGTACT.......................................................2230.3310100000000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGCTGG..................................................2830.3310100000000
...........................................TCGGCGCAGACGATGTCCAATGG...................................................................................................................23100.3030100000200
........................................................................................................................TGTACTGCTGGCACTTGGCGCAC......................................2370.1410100000000
...........................................TCGGCGCAGACGATGTCCAATGGT---------.........................................................................................................2490.1110100000000
...........................................TCGGCGCAGACGATGTCCAATG....................................................................................................................22100.1010100000000
..........................................GTCGGCGCAGACGATGTCCAATGG...................................................................................................................24100.1010100000000
droPer2
GGCAAT-------------GGTCCGGGCAATGGTCCAAT--GGTCGGCGCAGACGATGTCCAATGGT---------ACTTGGGCTTGCATC-TTTCCTCCTGGTTTGGTTTGGCTTACCTTGTACTGCTGGCAATTGGCGCACTGCCGGATATATCGGGCGATATCTGCCGTGT--GAAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGC.....................................................2563.50210183000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTG......................................................2461.67100100000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGCTG...................................................2761.338080000
..........................................................TCCAATGGT---------ACTTGGGCTTGCATC-TT.......................................................................................2611.001010000
..............................................................................TTGGGCTTGCATC-TTTCCTCCTGG..............................................................................2411.001010000
.....T-------------GGTCCGGGCAATGGTCCAAT--GG..........................................................................................................................................2311.001010000
.....T-------------GGTCCGGGCAATGGTCCAAT--GGTC........................................................................................................................................2511.001010000
......................................................................................................................................TTGGCGCACTGCCGGATATATCGGGC.....................26131.0013490000
.................................TCCAAT--GGTCGGCGCAGACGATGTCCAA......................................................................................................................2811.001010000
......................CCGGGCAATGGTCCAAT--GGTCGGCG....................................................................................................................................2511.001010000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACT.......................................................2360.674040000
.......................................................................................................TTTGGTTTGGCTTACCTTGTAC........................................................2260.503030000
........................................................................................................TTGGTTTGGCTTACCTTGTACTGC.....................................................2460.503030000
........................................................................................................TTGGTTTGGCTTACCTTGTACTGCTG...................................................2660.332020000
.......................................................................................................TTTGGTTTGGCTTACCTTGTACTGCT....................................................2660.332020000
.......................................................................................................................................TGGCGCACTGCCGGATATATCGGGC.....................25130.314040000
........................................................................................................TTGGTTTGGCTTACCTTGTACTG......................................................2360.171010000
............................................................................................TTTCCTCCTGGTTTGGTTTGGCTTACCT.............................................................2860.171010000
........................................................................................................TTGGTTTGGCTTACCTTGTAC........................................................2160.171010000
.......................................................................................................................................TGGCGCACTGCCGGATATATCGGGCGT...................27120.172110000
......................................................................................................................................TTGGCGCACTGCCGGATATATCGGG......................25130.152011000
.......................................................................................................................................TGGCGCACTGCCGGATATATCGGGCGG...................27130.081100000
......................................................................................................................................TTGGCGCACTGCCGGATATATCGG.......................24130.081010000
......................................................................................................................................TTGGCGCACTGCCGGATATATCG........................23130.081010000
droWil2
GGCAAT-------------------------GGCCCCACAAAGTCAGCGCATACTATGGCCCATGGTTCTTCCGGTATTTGTGTTAGCATT-TTTCCTGCTGCTTGTTGTTGACTGGGTTTGTATTGTTGGCATATTGTGCACTTTCCCACAAACGTCCTGATATCT---CGTT--GCATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................TCAGCGCATACTATGGCCCATGGTTCT...............................................................................................................27132.00320130190
...........................................TCAGCGCATACTATGGCCCATGGTTC................................................................................................................26128.00280140140
............................................CAGCGCATACTATGGCCCATGGTTCT...............................................................................................................2618.00803050
...............................................................TGGTTCTTCCGGTATTTGTGTTAGCA............................................................................................26147.711080490590
........................................................................................................TGTTGTTGACTGGGTTTGTATTGT.....................................................2416.00602040
...................................................TACTATGGCCCATGGTTCTTCCGGT.........................................................................................................2514.00402020
.......................................AAAGTCAGCGCATACTATGGCCCATGG...................................................................................................................2714.00402020
......................................................TATGGCCCATGGTTCTTCCGGTATTTG....................................................................................................2714.00403010
....................................CACAAAGTCAGCGCATACTATGGCCCA......................................................................................................................2714.00402020
....................................................................................................TGCTTGTTGTTGACTGGGTTTGTAT........................................................2514.00400040
...................................................TACTATGGCCCATGGTTCTTCCGGTA........................................................................................................2613.00303000
...................................................TACTATGGCCCATGGTTCTTCCGG..........................................................................................................2413.00303000
........................................AAGTCAGCGCATACTATGGCCCATGG...................................................................................................................2613.00300030
....................................CACAAAGTCAGCGCATACTATGGCCC.......................................................................................................................2613.00302010
......................................CAAAGTCAGCGCATACTATGGCCCA......................................................................................................................2513.00301020
...............................................................TGGTTCTTCCGGTATTTGTGTTAGC.............................................................................................25142.86400120280
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGG..................................................2472.4317010160
....................................................................................TAGCATT-TTTCCTGCTGCTTGTTGT.......................................................................2512.00201010
.....................................................................TTCCGGTATTTGTGTTAGCATT-TTTCC....................................................................................2722.00403010
....................................CACAAAGTCAGCGCATACTATGGCC........................................................................................................................2512.00200020
....................................................................................................TGCTTGTTGTTGACTGGGTTTGT..........................................................2312.00200020
......................................CAAAGTCAGCGCATACTATGGCC........................................................................................................................2312.00200020
...........................................................................TATTTGTGTTAGCATT-TTTCCTG..................................................................................2322.00400040
.........................................AGTCAGCGCATACTATGGCCCATGGT..................................................................................................................2612.00201010
......................................................TATGGCCCATGGTTCTTCCGGTATT......................................................................................................2512.00202000
...................................................TACTATGGCCCATGGTTCTTCCGGTAT.......................................................................................................2712.00201010
............................................CAGCGCATACTATGGCCCATGGTTC................................................................................................................2512.00201010
...........................................TCAGCGCATACTATGGCCCATGGT..................................................................................................................2412.00201010
...................................................TACTATGGCCCATGGTTCTTCCGGTATT......................................................................................................2812.00202000
.......................................................................................................TTGTTGTTGACTGGGTTTGTATTG......................................................2412.00201010
.................................................................................................TGCTGCTTGTTGTTGACTGGG...............................................................2112.00200020
.................................................CATACTATGGCCCATGGTTCTTCCGGTA........................................................................................................2812.00202000
..................................................................................................................TGGGTTTGTATTGTTGGCATATTG...........................................2421.50301020
..................................................................................................................TGGGTTTGTATTGTTGGCATATTGTG.........................................2621.50301020
...........................................................................TATTTGTGTTAGCATT-TTTCCTGCTGG..............................................................................2721.50303000
...............................................................TGGTTCTTCCGGTATTTGTGTTAGCAT...........................................................................................27131.4619012070
............................................................CCATGGTTCTTCCGGTATTTGTGT.................................................................................................24151.4021080130
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGGC.................................................2571.14801070
........................................................................................................................................TGTGCACTTTCCCACAAACGTCCTGA...................2671.14804040
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGGCA................................................2671.14807010
..................................................ATACTATGGCCCATGGTTCTTCCGG..........................................................................................................2511.00101000
........................................................................................................TGTTGTTGACTGGGTTTGTATTGTTC...................................................2611.00100010
........................................................................................................TGTTGTTGACTGGGTTTGTATTG......................................................2311.00100010
.......................................................................................................TTGTTGTTGACTGGGTTTG...........................................................1911.00100010
.................................................................................................TGCTGCTTGTTGTTGACTGGGT..............................................................2211.00101000
..............................................................................................................TGACTGGGTTTGTATTGTTGGCATA..............................................2571.00702050
...........................................TCAGCGCATACTATGGCCCATGG...................................................................................................................2311.00101000
.................................................CATACTATGGCCCATGGTTCTTCCGG..........................................................................................................2611.00101000
.........................................................................................TT-TTTCCTGCTGCTTGTTGTTGACT..................................................................2511.00100010
...............................................................................................CCTGCTGCTTGTTGTTGACTGGG...............................................................2311.00100010
............................................................................................TTTCCTGCTGCTTGTTGTTG.....................................................................2011.00100010
........................................................................................................TGTTGTTGACTGGGTTTGTATTGTTA...................................................2611.00100010
.....................................................CTATGGCCCATGGTTCTTCCGGT.........................................................................................................2311.00101000
..............................................................................TTGTGTTAGCATT-TTTCCTGCTGCT.............................................................................2521.00200020
.......................................AAAGTCAGCGCATACTATGGCCCA......................................................................................................................2411.00100010
......................................CAAAGTCAGCGCATACTATGGCCCATGG...................................................................................................................2811.00101000
..........................................................................................T-TTTCCTGCTGCTTGTTGTTG.....................................................................2111.00100010
.................................................................................................TGCTGCTTGTTGTTGACTGGGTTT............................................................2411.00100010
................................................................................................................ACTGGGTTTGTATTGTTGGCATATTG...........................................2621.00201010
..........................................................................................T-TTTCCTGCTGCTTGTTGTTGACTG.................................................................2511.00100010
.............................................................................................TTCCTGCTGCTTGTTGTTGACTGG................................................................2411.00101000
............................................CAGCGCATACTATGGCCCATGGTTCTTC.............................................................................................................2811.00100010
........................................................................................................TGTTGTTGACTGGGTTTGTATTGTT....................................................2511.00100010
....................................................ACTATGGCCCATGGTTCTTCCGGTATT......................................................................................................2711.00101000
.................................................CATACTATGGCCCATGGTTCT...............................................................................................................2111.00101000
....................................................................................................TGCTTGTTGTTGACTGGGTTTG...........................................................2211.00100010
...........................................TCAGCGCATACTATGGCCCATGGTTCTTC.............................................................................................................2911.00101000
........................................................................................................TGTTGTTGACTGGGTTTGTATTGTTTA..................................................2711.00100010
...............................................CGCATACTATGGCCCATGGTTCTTCCG...........................................................................................................2711.00101000
........................................AAGTCAGCGCATACTATGGCCCATGGT..................................................................................................................2711.00101000
.........................................................................................TT-TTTCCTGCTGCTTGTTGTTGACTTA................................................................2711.00100010
.........................................AGTCAGCGCATACTATGGCCCATGG...................................................................................................................2511.00100010
.................................................................................................TGCTGCTTGTTGTTGACTGGGTTTG...........................................................2511.00100010
......................................................TATGGCCCATGGTTCTTCCGGTAT.......................................................................................................2411.00101000
..........................................................................................................TTGTTGACTGGGTTTGTATTGTTGG..................................................2511.00101000
..................................................................................GTTAGCATT-TTTCCTGCTGCTTGTTG........................................................................2611.00101000
........................................................................................................................TGTATTGTTGGCATATTGTGCACTTT...................................2661.00605010
......................................................................TCCGGTATTTGTGTTAGCATT-TTTCC....................................................................................2621.00202000
..................................................................TTCTTCCGGTATTTGTGTTAGCATT-.........................................................................................2521.00201010
...............................................CGCATACTATGGCCCATGGTTCTTCCGG..........................................................................................................2811.00101000
...............................................CGCATACTATGGCCCATGGT..................................................................................................................2011.00100010
...................................................TACTATGGCCCATGGTTCTTCCG...........................................................................................................2311.00100010
..............................................................................................TCCTGCTGCTTGTTGTTGACTGGGT..............................................................2511.00100010
...........................................................CCCATGGTTCTTCCGGTATTTGTGT.................................................................................................25130.921207050
................................................................................................................................................TTCCCACAAACGTCCTGATATCT---CGT........2660.83504010
..............................................................ATGGTTCTTCCGGTATTTGTGTTAGC.............................................................................................26140.7911000110
...............................................................TGGTTCTTCCGGTATTTGTGTTAG..............................................................................................24140.711004060
..........................................................................................................................................TGCACTTTCCCACAAACGTCCTGA...................2470.71502030
.............................................................................................................................TGTTGGCATATTGTGCACTTTCCCA...............................2580.63504010
............................................................CCATGGTTCTTCCGGTATTTGTGTT................................................................................................25150.60906030
...........................................................................................................TGTTGACTGGGTTTGTATTGTTG...................................................2390.56501040
...........................................................................TATTTGTGTTAGCATT-TTTCCTGC.................................................................................2420.50101000
...................................................................................................................GGGTTTGTATTGTTGGCATATTGTGC........................................2620.50100010
..............................................................................................................TGACTGGGTTTGTATTGTTGGCATATT............................................2720.50101000
.............................................................................................................................TGTTGGCATATTGTGCACTTTCCCACA.............................2780.50403010
..............................................................................TTGTGTTAGCATT-TTTCCTGCTGC..............................................................................2420.50100010
..................................................................TTCTTCCGGTATTTGTGTTAGCATT-T........................................................................................2620.50100010
.......................................................................................................................TTGTATTGTTGGCATATTGTGCACTTT...................................2760.50303000
................................................................................................................................TGGCATATTGTGCACTTTCCCACAAACG.........................2880.50401030
.......................................................................CCGGTATTTGTGTTAGCATT-TTTCC....................................................................................2520.50101000
.....................................................................TTCCGGTATTTGTGTTAGCATT-TTTC.....................................................................................2620.50101000
.....................................................................TTCCGGTATTTGTGTTAGCATT-T........................................................................................2320.50101000
..............................................................................................................TGACTGGGTTTGTATTGTTGGCATATTG...........................................2820.50101000
...............................................................................TGTGTTAGCATT-TTTCCTGCTGCT.............................................................................2420.50100010
..............................................................................TTGTGTTAGCATT-TTTCCTGCTGG..............................................................................2420.50100010
..................................................................TTCTTCCGGTATTTGTGTTAGCATT-TT.......................................................................................2720.50100010
.............................................................................TTTGTGTTAGCATT-TTTCCTG..................................................................................2120.50100010
...................................................................TCTTCCGGTATTTGTGTTAGCATT-TT.......................................................................................2620.50100010
.............................................................................TTTGTGTTAGCATT-TTTCCTGCTGCT.............................................................................2620.50100010
.......................................................................................................................TTGTATTGTTGGCATATTGTGCACTT....................................2660.50302010
.................................................................................................................................................TCCCACAAACGTCCTGATATCT---CGT........2560.50302010
....................................................................................TAGCATT-TTTCCTGCTGC..............................................................................1820.50101000
................................................................GGTTCTTCCGGTATTTGTGTTAGCAT...........................................................................................26130.46603030
..........................................................................................................................................TGCACTTTCCCACAAACGTCCTGATA.................2670.43301020
..........................................................................................................................................TGCACTTTCCCACAAACGTCCTGATATC...............2870.43303000
.....................................................................................................................................TATTGTGCACTTTCCCACAAACGTCC......................2670.43302010
............................................................CCATGGTTCTTCCGGTATTTGTGTTA...............................................................................................26150.40604020
...............................................................TGGTTCTTCCGGTATTTGTGTTA...............................................................................................23150.40601050
.............................................................CATGGTTCTTCCGGTATTTGTGTTA...............................................................................................25150.40602040
.............................................................................................................................TGTTGGCATATTGTGCACTTTCCCAC..............................2680.38303000
..........................................................................................................................TATTGTTGGCATATTGTGCACTTT...................................2460.33202000
........................................................................................................................TGTATTGTTGGCATATTGTGCACT.....................................2460.33202000
..................................................................................................................................................CCCACAAACGTCCTGATATCT---CGT........2460.33200020
......................................................................................................................TTTGTATTGTTGGCATATTGTGCACTT....................................2760.33201010
..............................................................................................................TGACTGGGTTTGTATTGTTGGCATAT.............................................2670.29200020
........................................................................................................................................TGTGCACTTTCCCACAAACGTCCTG....................2570.29200020
..........................................................................................................................................TGCACTTTCCCACAAACGTCC......................2170.29202000
..............................................................ATGGTTCTTCCGGTATTTGTGTTAGCA............................................................................................27140.29401030
..............................................................................................................TGACTGGGTTTGTATTGTTGGCA................................................2370.29201010
................................................................GGTTCTTCCGGTATTTGTGTTAGCA............................................................................................25140.29403010
..........................................................GCCCATGGTTCTTCCGGTATTTGTGT.................................................................................................26120.25302010
.............................................................................................................................TGTTGGCATATTGTGCACTTTCCC................................2480.25201010
................................................................................................................................TGGCATATTGTGCACTTTCCCACAA............................2580.25200020
..........................................................GCCCATGGTTCTTCCGGTATTTGTG..................................................................................................25130.23302010
............................................................CCATGGTTCTTCCGGTATTTGTGTTAG..............................................................................................27140.21302010
..............................................................ATGGTTCTTCCGGTATTTGTGTTAG..............................................................................................25140.21300030
..............................................................ATGGTTCTTCCGGTATTTGTGTTA...............................................................................................24150.20301020
........................................................TGGCCCATGGTTCTTCCGGTATTTGTGT.................................................................................................28100.20202000
...............................................................................................................................................TTTCCCACAAACGTCCTGATATCT---CG.........2660.17100010
...........................................................................................................................ATTGTTGGCATATTGTGCACTTTCC.................................2560.17101000
.................................................................................................................................................TCCCACAAACGTCCTGATATCT---CGTT--.....2660.17101000
........................................................................................................................TGTATTGTTGGCATATTGTGCACTAAA..................................2760.17101000
...........................................................................................................................ATTGTTGGCATATTGTGCACTTTCCCA...............................2760.17101000
........................................................................................................................TGTATTGTTGGCATATTGTGCACTT....................................2560.17101000
.......................................................................................................................................................AAACGTCCTGATATCT---CGTT--GCATT2560.17101000
..........................................................................................................................TATTGTTGGCATATTGTGCACTTTCCC................................2760.17101000
................................................................................................................................................TTCCCACAAACGTCCTGATATCT---CGTT--G....2860.17101000
.................................................................................................................................................TCCCACAAACGTCCTGATATCT---CG.........2460.17101000
.........................................................................................................................GTATTGTTGGCATATTGTGCACTT....................................2460.17101000
..........................................................................................................................................TGCACTTTCCCACAAACGTCCTGATATCT---...........2960.17101000
..........................................................................................................................TATTGTTGGCATATTGTGCACTTTCC.................................2660.17101000
................................................................................................................................................TTCCCACAAACGTCCTGATATCT---CG.........2560.17101000
...................................................................................................................................................CCACAAACGTCCTGATATCT---CGT........2360.17101000
.......................................................................................................................TTGTATTGTTGGCATATTGTGCACTTTA..................................2860.17101000
..................................................................................................................................................CCCACAAACGTCCTGATATCT---CGTT--GCAT.2960.17101000
..................................................................TTCTTCCGGTATTTGTGTTAGCAT...........................................................................................24130.15201010
...........................................................................................................................................GCACTTTCCCACAAACGTCCTGATATC...............2770.14101000
.............................................................................................................TTGACTGGGTTTGTATTGTTGGCA................................................2470.14101000
..........................................................................................................................................TGCACTTTCCCACAAACGTC.......................2070.14101000
...............................................................TGGTTCTTCCGGTATTTGTGTTAGCT............................................................................................26140.14200020
.............................................................................................................TTGACTGGGTTTGTATTGTTGGCAT...............................................2570.14101000
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGGCAA...............................................2770.14101000
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGGCAT...............................................2770.14101000
.........................................................................................................................................GTGCACTTTCCCACAAACGTCCTGA...................2570.14101000
..............................................................................................................TGACTGGGTTTGTATTGTTGGCAT...............................................2470.14101000
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGGT.................................................2570.14100010
.....................................................................................................................................TATTGTGCACTTTCCCACAAACGTCCTA....................2870.14100010
..............................................................................................................TGACTGGGTTTGTATTGTTGGCATAA.............................................2670.14100010
...........................................................................................................................................GCACTTTCCCACAAACGTCCTGAA..................2470.14101000
.............................................................................................................TTGACTGGGTTTGTATTGTTGGCATA..............................................2670.14100010
...............................................................TGGTTCTTCCGGTATTTGTGTTAGTT............................................................................................26140.14202000
..............................................................................................................TGACTGGGTTTGTATTGTTGGCATT..............................................2570.14100010
.............................................................CATGGTTCTTCCGGTATTTGTGT.................................................................................................23160.13202000
...........................................................................................................TGTTGACTGGGTTTGTATTGTTGGA.................................................2580.13101000
GGCAAT-------------------------GGCCCCACAAAGTCAGCGCA..................................................................................................................................2680.13101000
GGCAAT-------------------------GGCCCCACAAAGTCAGCG....................................................................................................................................2480.13101000
.............................................................................................................................TGTTGGCATATTGTGCACTTTCCCACAA............................2880.13100010
..............................................................................................................................GTTGGCATATTGTGCACTTTCCCA...............................2480.13101000
................................................................................................................ACTGGGTTTGTATTGTTGGCATAT.............................................2480.13101000
..............................................................................................................................GTTGGCATATTGTGCACTTTCCCACAAA...........................2880.13101000
.............................................................................................................................TGTTGGCATATTGTGCACTTTCCCACAAA...........................2980.13101000
...........................................................................................................TGTTGACTGGGTTTGTAT........................................................1890.11101000
..............................................................................................................TGACTGGGTTTGTATTGTTG...................................................2090.11100010
..........................................................................................................................................TGCACTTTCCCACAAACGT........................1990.11100010
...........................................................................................................TGTTGACTGGGTTTGTATTGTT....................................................2290.11101000
..CAAT-------------------------GGCCCCACAAAGTCAGCGCATAC...............................................................................................................................27100.10100010
..CAAT-------------------------GGCCCCACAAAGTCAGCGCATACT..............................................................................................................................28100.10100010
..............................................................ATGGTTCTTCCGGTATTTGTGTTAGCAT...........................................................................................28130.08100010
................................................................GGTTCTTCCGGTATTTGTGTTAGCATA-.........................................................................................27130.08100010
................................................................GGTTCTTCCGGTATTTGTGTTAGC.............................................................................................24140.07101000
................................................................GGTTCTTCCGGTATTTGTGTTAG..............................................................................................23140.07101000
............................................................CCATGGTTCTTCCGGTATTTGTGTTAGC.............................................................................................28140.07100010
.............................................................CATGGTTCTTCCGGTATTTGTGTTAGC.............................................................................................27140.07100010
....................................................................CTTCCGGTATTTGTGTTAGC.............................................................................................20140.07100100
.............................................................CATGGTTCTTCCGGTATTTGTGTTAG..............................................................................................26140.07100010
...........................................................CCCATGGTTCTTCCGGTATTTGTG..................................................................................................24140.07101000
......................................................................TCCGGTATTTGTGTTAGC.............................................................................................18140.07100010
............................................................CCATGGTTCTTCCGGTATTTGTGTTAGCA............................................................................................29140.07101000
..................................................................TTCTTCCGGTATTTGTGTTAGC.............................................................................................22140.07100010
............................................................................................TTTCCTGCTGCTTGTTGTTGATA..................................................................23150.07100010
...............................................................TGGTTCTTCCGGTATTTGTGTTAGCAG...........................................................................................27150.07101000
.............................................................................................TTCCTGCTGCTTGTTGTTGAT...................................................................21150.07101000
...............................................................TGGTTCTTCCGGTATTTGTGTT................................................................................................22150.07100010
.............................................................CATGGTTCTTCCGGTATTTGTGTT................................................................................................24150.07101000
...............................................................TGGTTCTTCCGGTATTTGTGT.................................................................................................21160.06100010
droVir3
GGAAGC-------------------------GGCCCCACGAAATCTGCGCATAATGTTGCCCATGGTTCC------------GTCAGCATT-CGTCCTGCGGGTCCCACCTGTTCCACCTTGAACTTCTGACACACCTCACAGCACCTCACATGTCGTGCAGCGTCC---CGGA--ACATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GTCGCG-------------GATCGAGGCAAAGGTCCCACGAAATCCGCGCACAGGACTGCCATCGGCTCCGCTACCTGCCTGGTCAGCATC-TGTCCGGCCGGCTTCTGTTGTACGCCCTTGAATTTCTGGCACGTCTCGCAGCGCTTCACGTAACGAGCGGCATCT---CGGG-ACATACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................TGAATTTCTGGCACGTCTCGCAGCGC...................................26133.314323100145
...........................................TCCGCGCACAGGACTGCCATCGGCTCCGC.............................................................................................................2962.0012410070
...................................................................................................................................................TCACGTAACGAGCGGCATCT---CGGG-ACA...27101.2012710040
...........................................TCCGCGCACAGGACTGCCATCGGCTCC...............................................................................................................2761.177000070
...........................................TCCGCGCACAGGACTGCCATCGGCTC................................................................................................................2661.006300030
........................................................................................................................TGAATTTCTGGCACGTCTCGCAGC.....................................24131.0013910030
..................................................................................................................................................TTCACGTAACGAGCGGCATCT---CGGG-......25101.0010900010
...........................................TCCGCGCACAGGACTGCCATCGGC..................................................................................................................2460.835400010
...........................................TCCGCGCACAGGACTGCCATCGGCT.................................................................................................................2560.835300020
........................................................................................................................TGAATTTCTGGCACGTCTCGCAGCGCT..................................27120.8310400051
..................................................................................................................................................TTCACGTAACGAGCGGCATCT---CGGG-ACA...28100.808500030
........................................................................................................................TGAATTTCTGGCACGTCTCGCAGCG....................................25130.7710900010
..................................................................................................................................................TTCACGTAACGAGCGGCATCT---CGGG-AC....27100.707500011
......................................................................................................................CTTGAATTTCTGGCACGTCTCGCAG......................................25110.647700000
................................................................................TGGTCAGCATC-TGTCCGGCCGGCTT...........................................................................2550.603200010
......................................................................................................................CTTGAATTTCTGGCACGTCTCGCAGC.....................................26110.556400020
...................................................................................................................................................TCACGTAACGAGCGGCATCT---CGGG-......24100.505400010
........................................................................TACCTGCCTGGTCAGCATC-TGTC.....................................................................................2340.502200000
...........................................TCCGCGCACAGGACTGCCATCGGCTCCG..............................................................................................................2860.503300000
........................................................................TACCTGCCTGGTCAGCATC-TGTCCGGC.................................................................................2740.502100010
...................................................................................................................................................TCACGTAACGAGCGGCATCT---CGGG-AC....26100.404300010
...........................................TCCGCGCACAGGACTGCCATCGG...................................................................................................................2360.332200000
...........................................TCCGCGCACAGGACTGCCATCGGCTT................................................................................................................2660.332200000
.........................................................................................................................GAATTTCTGGCACGTCTCGCAGCGC...................................25130.314300010
...................................................................................................................................................TCACGTAACGAGCGGCATCT---CGGG-A.....25100.303300000
........................................................................................................................TGAATTTCTGGCACGTCTCGCAGCGCTT.................................28110.273300000
........................................................................TACCTGCCTGGTCAGCATC-TGTCCGG..................................................................................2640.251000001
............................................................................TGCCTGGTCAGCATC-TGTCCGGCCGGC.............................................................................2740.251000010
........................................................................TACCTGCCTGGTCAGCATC-TGTCCGGCC................................................................................2840.251100000
......................................................................................................................CTTGAATTTCTGGCACGTCTCGCA.......................................24120.253200010
........................................................................TACCTGCCTGGTCAGCATC-TGTCCG...................................................................................2540.251000010
........................................................................TACCTGCCTGGTCAGCATC-TGTCC....................................................................................2440.251100000
........................................................................................................................TGAATTTCTGGCACGTCTCGCAG......................................23130.233200010
......................................CGAAATCCGCGCACAGGACTGCCAT......................................................................................................................2550.201100000
................................................................................TGGTCAGCATC-TGTCCGGCCGGC.............................................................................2350.201100000
............................................CCGCGCACAGGACTGCCATCGGCTCCGC.............................................................................................................2860.171100000
............................................CCGCGCACAGGACTGCCATCGGCTCCG..............................................................................................................2760.171100000
.................................................CACAGGACTGCCATCGGCTCCG..............................................................................................................2260.171100000
............................................CCGCGCACAGGACTGCCATCGGC..................................................................................................................2360.171000010
...........................................TCCGCGCACAGGACTGCCATCGC...................................................................................................................2360.171100000
.................................................CACAGGACTGCCATCGGCTCCGCTAC..........................................................................................................2660.171100000
.................................................CACAGGACTGCCATCGGCTCCGCTACC.........................................................................................................2760.171100000
................................................................................TGGTCAGCATC-TGTCCGGC.................................................................................1960.171100000
.............................AAGGTCCCACGAAATCCGCGCACA................................................................................................................................2460.171100000
.........................................................................................................................GAATTTCTGGCACGTCTCGCAGC.....................................23130.152200000
.....................TCGAGGCAAAGGTCCCACGA............................................................................................................................................2080.131000010
...........................................................................................................TGTTGTACGCCCTTGAATTTCTGGCAC...............................................2790.111100000
..................................................................................................................................................TTCACGTAACGAGCGGCATCT---CGG........24100.101100000
..................................................................................................................................................TTCACGTAACGAGCGGCATCT---CGGG-A.....26100.101100000
.................................................................................................................................................CTTCACGTAACGAGCGGCATCT---C..........23100.101100000
...............................................................................................................................CTGGCACGTCTCGCAGCGCTTCACGTA...........................27100.101100000
......................................................................................................................................................CGTAACGAGCGGCATCT---CGGG-......21100.101100000
..................................................................................................................................................TTCACGTAACGAGCGGCATC...............20100.101000010
............................................................................................................GTTGTACGCCCTTGAATTTCTGG..................................................23100.101100000
.............................................................................................................................TTCTGGCACGTCTCGCAGCGCTTCA...............................25100.101100000
......................................................................................................................CTTGAATTTCTGGCACGTCTCGCAGCG....................................27110.091100000
......................................................................................................................CTTGAATTTCTGGCACGTCTCGC........................................23120.081000010
.........................................................................................................................GAATTTCTGGCACGTCTCGCAGCGCT..................................26120.081100000
............................................................................................................................TTTCTGGCACGTCTCGCAGCGC...................................22130.081000010
........................................................................................................................TGAATTTCTGGCACGTCTCGCAGCGT...................................26130.081100000
..............................................................................................................................TCTGGCACGTCTCGCAGCGC...................................20130.081000100
droGri2
GGTAGT-------------------------GGTCCCACGAAGTCAGCACAAACTGTGGTCCAGGGTTCCTCCGGTGTCTTGGTCATCATT-TGTCCTGACGCGGCCATTTGACTTGGGTTATACTGCTGACATATTTCGCATTGTTGGACATATGCACGTACGTCT---CTGTATAAGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................TTCGCATTGTTGGACATATGCACGTACG.................28200.05110
droAna3
GGCAAT-------------------------GGTCCCACGAAGTCCGTACATACCGTCGCCCACGGCTCCTCTGGGACCTGTGTCAGCATT-TTCCCTGCGGCCTGCATCTGGCTTGGTTTATACCGCATGCATGTCTCGCACTTCCTGACATAGTTCCTTACGTCC---CTTT--GCATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................CACGAAGTCCGTACATACCGTCGCC........................................................................................................................2511.001010000
.......................................................................................................................................TCTCGCACTTCCTGACATAGTTCCTT....................2660.171100000
...............................................................................................................................................TTCCTGACATAGTTCCTTACGTCC---CT.........26190.112110000
..........................................................................................................................TACCGCATGCATGTCTCGCACTTCCTGAA..............................29100.101100000
............................................................................................................TCTGGCTTGGTTTATACCGCATGCATG..............................................27100.101010000
........................................................................................................TGCATCTGGCTTGGTTTATACCGC.....................................................24100.101010000
................................................................................................................GCTTGGTTTATACCGCATGCATGTC............................................25120.081100000
................................................................................................................GCTTGGTTTATACCGCATGCATGTCTCG.........................................28120.081100000
............................................................................................TTCCCTGCGGCCTGCATCTGGCTTGG...............................................................26150.071100000
..............................................................................................CCCTGCGGCCTGCATCTGGCTTG................................................................23150.071100000
....................................................................................CAGCATT-TTCCCTGCGGCCTGCAT........................................................................24200.051100000
.............................................................................................TCCCTGCGGCCTGCATCTGGC...................................................................21200.051100000
....................................................ACCGTCGCCCACGGCTCCTCTGGGACCT.....................................................................................................28200.051100000
..................................................................................................................TTGGTTTATACCGCATGCATGTCC...........................................24200.051010000
....................................................................................CAGCATT-TTCCCTGCGGCCTGCATC.......................................................................25200.051010000
..................................................................................GTCAGCATT-TTCCCTGCGGCCTGCA.........................................................................25200.051100000
.......................................................................................................................................................ATAGTTCCTTACGTCC---CTTT--GCATC25200.051010000
droBip1
GGCAAT-------------------------GGACCTACAAAGTCCGCGCATGCCGTTGCCCATGGCTCTTCCGGGACCTGTGACGGCATC-TATCCTGCCATTTGCATCTGGCTCGGCTTGTACTTCAGGCACGTGTCGCACCTCCTGACATATTTTCGGATGACC---CTCG--GCATCSizeHit CountTotal NormTotal
No Reads
droKik1
GGAAAT-------------------------GGGCCCATGAATTCCGCACATACTACGCTGAATGGTTCATCGTCTTGGCGGATGTTCA---CGGCCGGCGGGTTTAAGTTGGCTTACCTTGTATTTTTGGCAGGTGGGGCACCGGCGTACGTACTTGGTGACTTCC---CTGA--AAAGTSizeHit CountTotal NormTotal
No Reads
droFic1
GGCAAA-------------------------GGACCTACAAGGTCCGCACAGAGGATGTCGAAGGGCTCACTTACGAACCGGGTTAGCATT-TTCCCTGCGGCTTTGGTCTGAACGGCCTTGAACTTCTGGCAGGGCTCGCAGCGCCGCACATGGTGTTTAGCGTCG---CGGT--ACATGSizeHit CountTotal NormTotal
No Reads
droEle1
GGAAGG-------------------------GGTCCAACGAAATCGGCTACGACGAGCGCGAACGGCTCCGTAGGTTGGCGAGTGAGCATC-TTGCCAGCTGGTTTACGCTGGCTAACCTTGTACTGTTGGCAGGTCACACAGATAGTGACATACCGTACCACGTCC---CGGT-TGAAGTSizeHit CountTotal NormTotal
No Reads
droRho1
GGAAGG-------------------------GGTCCAATAAAATCGGCGCAGACGGTGTCAAAGGGTTCACTGATCGGCCTGGTAAACCTC-TTACCCGCTGGTTTGTTTTGGCTTACCTTGAACCGTTGGCAAGTGTCACACTTACGAACATAACTGGCTACATCA---CGAA--AGAGTSizeHit CountTotal NormTotal
No Reads
droBia1
GGAAGG-------------------------GGCCCAATAAAATCGGCGCAGACAGTATCGAATCCGTC-----------TGGTGAACATT-TTACCCGCCGGTTTGGTTTGGCTGACTTTGAACCGTTGGCAAGTGTCACACTTGCGGACATACCTGGCAATATCG---CGGA--AAAGASizeHit CountTotal NormTotal
No Reads
droTak1
GGAAGG-------------------------GGTCCAATGAAGTCGGCGCAGATAGTGTCAAAGGGCTCACTGATCTGCCTGGTGAACATC-TTACCCGCTGGTTTGTTTTGGCTTACCTTGAACTGTTGACAAGTGTCGCACTTGCGAACATACCGGGCTACATCA---CGAA-AGAGTCSizeHit CountTotal NormTotal
No Reads
droEug1
GGAAGG-------------------------GGCCCAATAAAATCGGCGCAGACAGTATCGACTGGCTTGTTAATCTGTCTGGTGAACATT-TTACCCGCCGGTTTGGTTTGGCTGACTTTGAACCGTTGGCAAGTGTCACGCTTGCGGACATACCTGGCAATATCG---CGGA--AAAGASizeHit CountTotal NormTotal
No Reads
dm3
AGCAAG-------------------------GGGC-CACGAAATCTGCGCACACGGTTGCCCATGCTTCTACCGGCTCCTGTGTTAACCTTTTCTTCGGCCGCCTGTAGCTGGCTGGGTTTGTACTTCATGCATCTCTCGCAGTTTCGCACGTACTTTCTTATGTCT---CGAT--GCATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................TACTTTCTTATGTCT---CGAT--GCATT242764.5015290001000010000000000000420000001000000000002010808101031000214000000000000000000000030551000000000000000000000001040023000000000001002010001005054816758613811424105000000000000000000010000000000001191164500130000010023000000000671101490274128669446300000000330200000000000000000000000000000000000000000000000200000516340000005520000000000000031020000000
........................................................................................................................................................TACTTTCTTATGTCT---CGAT--GCAT.23276.5015300100000000000000000000000000000000000000000000010002000000100000000000000000000001000000000000000000000000000000000000000000000000000000001101142110110290500000000000000000000000000000000040103008000000002000000000100011023197310000000000000000000000000000000000000000000000000000000000000000000210000000101000000000000000110000000
...........................................TCTGCGCACACGGTTGCCCATGCTTC................................................................................................................26145.00450000000000000000000000100000000000000001000000103100300000000000000000000000000000200020000000002000000000000010000000000000000000000000000000000110000000000000000000000000000000000000000000000600000000001200013000200000100040000000000000000000000000000000000000000000000000000000000000000002000000000101000000000000000101000000
......................................................................................................................TTTGTACTTCATGCATCTCTCGCAGT.....................................26132.003200000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200010000000000000003000150000000000000000000000000000000000000000000000000000000000000000000301000000200000000000000000100000000
........................................................................................................................................................TACTTTCTTATGTCT---CGAT--GC...21228.5057000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000030130120410400000000000000200000000000000000000000000000000000001000000000100010000000000022401140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGTAGCTGGCTGGGTTTGTACTTC.....................................................24128.002800000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000001000000000000000000000000001000110000000000000000000000000000000000000000000000000000000000600010000000000000000020000000000000000000000000000000000000000000000000000000000000000000011000000020000000000000000000000000
....................................................................................TAACCTTTTCTTCGGCCGCCTGTAGC.......................................................................26125.00250000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000001000000000001000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000212100000000000000000200070000000000000000000000000000000000000000000000000000000000000000000101000000100000000000000000000000000
....................................CACGAAATCTGCGCACACGGTTGCC........................................................................................................................25521.201060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000110001000200000000000030100000000000000000000000000000000000001000000000000000100000301017080169370000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000001000000
...................................................................TCTACCGGCTCCTGTGTTAACCTT..........................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000501000000000000010100090000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................TCCTGTGTTAACCTTTTCTTCGGCC................................................................................25118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACCGGCTCCTGTGTTAACCTTTTCT......................................................................................26116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000003000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACCGGCTCCTGTGTTAACCTTTTC.......................................................................................25115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000070000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000
....................................CACGAAATCTGCGCACACGGTTGCCCA......................................................................................................................27515.00750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003210000300000000000000000000000000000000000000000000000000100000000000200081201016240000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
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......................................................................................................................TTTGTACTTCATGCATCTCTC..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTAACCTTTTCTTCGGCCGC..............................................................................2011.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CGCCTGTAGCTGGCTGGGTTT............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTGCCCATGCTTCTACCGGCTCCTGTGT.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..CAAG-------------------------GGGC-CACGAAATCTGCGCA..................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TCTTCGGCCGCCTGTAGCTGGCTGGGT..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CATGCTTCTACCGGCTCCTGT...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CATGCTTCTACCGGCTCCTGTGTTAACCT...........................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTTTCTTCGGCCGCCTGTAGCTGGCTG.................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGGC-CACGAAATCTGCGCACACGGT............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGTGTTAACCTTTTCTTCGGCCGCCTGT..........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CAGTTTCGCACGTACTTTCTTATGTC...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TCTCGCAGTTTCGCACGTACTTTC......................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................TCGGCCGCCTGTAGCTGGCTGGGTTT............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCCTGTGTTAACCTTTTCTTCGT..................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CTTTCTTATGTCT---CGAT--GCAT.2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TACCGGCTCCTGTGTTAAC.............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GC-CACGAAATCTGCGCACACGGTTG..........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CGCCTGTAGCTGGCTGGGTT.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGCAAC-------------------------GGGCCCACGAAGTCCGCGCACACGGTTACCCATGGTTCTTCCGGCACCTGTGTTAACATC-TTCCCGGCCGCCTGTAGCTGGCTGGACTTGTACTTCATGCAGCTCTCGCAGTTTCGCATATACTTCCTTATGTCC---CGAT--GCATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGC.......................................................................256916.1754970414861503113429149079801861000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAGC..............................................253362.33108700301010278296675100201000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGCT......................................................................266181.331088000100787127159103010000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCGCAGT.....................................304176.7570700000037310222660000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAG........................................................................246148.1788900132003774038315150422000
..................................................................................................................TGGACTTGTACTTCATGCAGCTC............................................23461.502460000006514921200612000
............................................................................................................................................CAGTTTCGCATATACTTCCTTATGTCC---CGA........30341.6712500000010302200000000
........................................................................................................................TGTACTTCATGCAGCTCTCGCAGTT....................................25735.572490000004734116454030000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCGCAG......................................29431.50126000100291272120000000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGC.......................................................................26629.831790001003010625121130000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGC.......................................................................24728.57200000600439739113010000
..................................................................................................................TGGACTTGTACTTCATGCAGC..............................................21426.751070000004225920020000
..................................................................................................................TGGACTTGTACTTCATGCAGCT.............................................22425.751030000002725736080000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCT...........................................24424.5098000800103288140261000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAG...............................................24323.677100000012136200200000
...AAC-------------------------GGGCCCACGAAGTCCGCGCACACGG.............................................................................................................................28123.0023000000801410000000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGCT......................................................................25721.141480001004793610000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTA.........................................................................23620.6712400030054429430252000
.......................................................................................................................TTGTACTTCATGCAGCTCTCGCAGTT....................................26719.00133000000292763130001000
.........................................................................................TC-TTCCCGGCCGCCTGTAGCTGGC...................................................................24716.86118000200323823212000000
..................................................................................GTTAACATC-TTCCCGGCCGCCTGTAGC.......................................................................27613.67820001001653470010000
......................................................................................................................CTTGTACTTCATGCAGCTCTCGCA.......................................24611.1767000000164020000000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCGCAGTT....................................31410.2541000000325310000000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAGCT.............................................2639.0027002000104110171000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAGCTC............................................2739.0027002000111221071000
....................................................................................TAACATC-TTCCCGGCCGC..............................................................................1868.00480000001948017000000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGCT......................................................................2767.00420000001526100000000
...AAC-------------------------GGGCCCACGAAGTCCGCGCACACG..............................................................................................................................2717.00700000000115000000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCG.........................................2646.7527000100911220020000
.........................................................................................................................................................ACTTCCTTATGTCC---CGAT--GCATT2356.6033000000010227030000
........................................................................CGGCACCTGTGTTAACATC-TTCCCGGC.................................................................................2766.00360000001261600011000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTC..........................................2546.00240001000010120100000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGCTGGC...................................................................2956.0030000000273000000000
...AAC-------------------------GGGCCCACGAAGTCCGCGCACACGGT............................................................................................................................2916.00600000022000020000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCGC........................................2745.752300041053401050000
....................................................................................TAACATC-TTCCCGGCCGCCTGT..........................................................................2265.6734001200812011090000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGT.......................................................................2565.333200130024743080000
...AAC-------------------------GGGCCCACGAAGTCCGCGCACA................................................................................................................................2515.00500000010310000000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAGCA.............................................2635.0015000000000000141000
...................................................................TCTTCCGGCACCTGTGTTAACATC-.........................................................................................2465.0030001100511400071000
...............................................................................................................GGCTGGACTTGTACTTCATGCAGC..............................................2434.671400010011410060000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGCTG.....................................................................2764.1725000000112641010000
..................................................................................................................TGGACTTGTACTTCATGCAGCTA............................................2344.0016000000101010040000
...AAC-------------------------GGGCCCACGAAGTCCGCGCACACGGTA...........................................................................................................................3014.00400000031000000000
....AC-------------------------GGGCCCACGAAGTCCGCGCACACGGT............................................................................................................................2814.00400000030100000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGCTGG....................................................................2853.8019000000631000000000
.........................................................................................................................................................ACTTCCTTATGTCC---CGAT--GCA..2153.8019000100010115001000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGG.......................................................................2473.4324000000714300000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGA.......................................................................2563.3320000100231030010000
....................................................................................TAACATC-TTCCCGGCCGCCT............................................................................2063.332000005040107030000
................................................................................................................................................TTCGCATATACTTCCTTATGTCC---CGA........2633.331000000011800000000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCGCA.......................................2843.251300010021400032000
.........................................................TACCCATGGTTCTTCCGGCACCTG....................................................................................................2413.00300300000000000000
............................................................................................................................................CAGTTTCGCATATACTTCCTTATGTC...............2633.00900000030600000000
.....C-------------------------GGGCCCACGAAGTCCGCGCACACGGT............................................................................................................................2713.00300000010200000000
.........................................................TACCCATGGTTCTTCCGGCACCTGT...................................................................................................2513.00300010000002000000
...AAC-------------------------GGGCCCACGAAGT.........................................................................................................................................1613.00300000000003000000
................................GGCCCACGAAGTCCGCGCACACGGT............................................................................................................................2513.00300000030000000000
....................................................................................TAACATC-TTCCCGGCCGCCTG...........................................................................2162.671600120050124010000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAG........................................................................2562.671600000029220010000
............................................................................................TTCCCGGCCGCCTGTAGCTGGCTG.................................................................2472.571800000005841000000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGCTGGC...................................................................2862.501500000037140000000
.........................................................................................TC-TTCCCGGCCGCCTGTAGCT......................................................................2182.5020000000217100000000
.......................................................................................................................TTGTACTTCATGCAGCTCTCGCAGT.....................................2582.381900030011932000000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAG........................................................................2372.141500000039111000000
....AC-------------------------GGGCCCACGAAGTCCGCGCACACGG.............................................................................................................................2712.00200000010100000000
........................................................................................................TGTAGCTGGCTGGACTTGTACTTC.....................................................2442.00800000010700000000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAGCTCT...........................................2832.00600010020000030000
...AAC-------------------------GGGCCCACGAAGTCCGCGCACACGGTT...........................................................................................................................3012.00200000020000000000
.......................................................................................................................TTGTACTTCATGCAGCTCTCGCA.......................................2381.8815000000011130000000
............................................................................................TTCCCGGCCGCCTGTAGCTGGC...................................................................2271.861300000014350000000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTCGT........................................2741.75700000010500010000
........................................................................................................................TGTACTTCATGCAGCTCTCGCAGT.....................................2481.751400010032241010000
........................................................................................................TGTAGCTGGCTGGACTTGTACTTCATG..................................................2731.67500000030200000000
..............................................................................................................TGGCTGGACTTGTACTTCATGCAGCTA............................................2731.67500000000010040000
..........................................................................................................................................CGCAGTTTCGCATATACTTCCTTATGTC...............2831.67500010010003000000
..............................................................................................................TGGCTGGACTTGTACTTCATG..................................................2131.67500000010112000000
..............................................................................................................TGGCTGGACTTGTACT.......................................................1651.60800000010007000000
..................................................................................................................TGGACTTGTACTTCATGCAG...............................................2041.50600000031200000000
...................................................................................................................................CAGCTCTCGCAGTTTCG.................................17101.4014000000000014000000
....................................................................CTTCCGGCACCTGTGT.................................................................................................1681.3811000000100010000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAA........................................................................2461.33800000000000080000
..................................................................................GTTAACATC-TTCCCGGCCGCCTGTAG........................................................................2661.33800000025100000000
..................................................................TTCTTCCGGCACCTGTGTTAACATC-.........................................................................................2561.33801010031101000000
...............................................................................................................GGCTGGACTTGTACTTCATGCAG...............................................2331.33400000000100021000
.........................................................................................TC-TTCCCGGCCGCCTGTAGCTGG....................................................................2371.29900000023211000000
.........................................................................................TC-TTCCCGGCCGCCTGTAGCTGGCTG.................................................................2671.29900000010350000000
............................................................................................TTCCCGGCCGCCTGTAGCTGGCTGGA...............................................................2641.25500000001220000000
..................................................................................................................TGGACTTGTACTTCATGCA................................................1941.25500000020210000000
....................................................................................................CGCCTGTAGCTGGCTGGACTTGTACTT......................................................2741.25500000031100000000
.........................................................................................................................................................ACTTCCTTATGTCC---CGAT--GCAT.2251.20600000000004011000
.......................................................................................................................TTGTACTTCATGCAGCT.............................................1781.13900000000009000000
.........................................................................................TC-TTCCCGGCCGCCTGTAGC.......................................................................2081.13900000006111000000
..................................................................................................................................GCAGCTCTCGCAGTTTCG.................................1891.111000000000009010000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGG.......................................................................2561.00600200031000000000
...................................................................TCTTCCGGCACCTGTGTTAACAT...........................................................................................2361.00600000020300010000
...................................CCACGAAGTCCGCGCACACGGT............................................................................................................................2211.00100000010000000000
..............................................................................................................TGGCTGGACTTGTACTTCATGCA................................................2331.00300000010100010000
...AAC-------------------------GGGCCCACGAAGTC........................................................................................................................................1711.00100000000001000000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGCTG.....................................................................2671.00700000001060000000
...............................................................................................................................CATGCAGCTCTCGCAGTTTCGCATA.............................2531.00300000000201000000
.................................................................................................................CTGGACTTGTACTTCATGCAGCTCT...........................................2531.00300000010101000000
...............................GGGCCCACGAAGTCCGCGCACACGGT............................................................................................................................2611.00100000010000000000
...............................GGGCCCACGAAGTCCGCGCACACG..............................................................................................................................2411.00100000000001000000
...................................................CACGGTTACCCATGGTTCTTCCGGC.........................................................................................................2511.00100100000000000000
................................GGCCCACGAAGTCCGCGCACACGG.............................................................................................................................2411.00100000000100000000
.................................GCCCACGAAGTCCGCGCACACGGT............................................................................................................................2411.00100000000100000000
....................................................................................................CGCCTGTAGCTGGCTGGACTTGTAC........................................................2541.00400000020110000000
....................................................................................................................................................CATATACTTCCTTATGTCC---CGAT--GCA..2631.00300020000000010000
..........................................GTCCGCGCACACGGTTACCCATGGT..................................................................................................................2511.00100000000001000000
...AAC-------------------------GGGCCCACGAAGTCCGCGCAC.................................................................................................................................2411.00100000000001000000
..CAAC-------------------------GGGCCCACGAAGTCCGC.....................................................................................................................................2111.00100000000001000000
....................................................................................................CGCCTGTAGCTGGCTGGACTTGTA.........................................................2441.00400000020110000000
...................................................................TCTTCCGGCACCTGTGTTAACATC-TT.......................................................................................2661.00600010000400010000
..........................................................................................................................TACTTCATGCAGCTCTCGCAGTTTCGCA...............................2871.00700000031210000000
....................................CACGAAGTCCGCGCACACGGTT...........................................................................................................................2211.00100000001000000000
....................................CACGAAGTCCGCGCACACGGT............................................................................................................................2111.00100000001000000000
......................................................................................................................CTTGTACTTCATGCAGCTCTCGCAGTT....................................2761.00600000032100000000
...AAC-------------------------GGGCCCACGAAGTCC.......................................................................................................................................1811.00100000000001000000
...................................CCACGAAGTCCGCGCACACGGTTAC.........................................................................................................................2511.00100000000001000000
.........................................................TACCCATGGTTCTTCCGGC.........................................................................................................1911.00100000000001000000
...............................................................................TGTGTTAACATC-TTCCCGGCCGCCTGT..........................................................................2761.00600010031001000000
..........................................................................................C-TTCCCGGCCGCCTGTAGC.......................................................................1980.88700000000106000000
.........................................................................................TC-TTCCCGGCCGCCTGTAGCTG.....................................................................2280.88700000014110000000
.........................................................................................................................................................ACTTCCTTATGTCC---C..........1560.83500000000005000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAAA.......................................................................2560.83500000000000050000
..................................................................................GTTAACATC-TTCCCGGCCGCCTGTAGCT......................................................................2860.83500000014000000000
....................................................................................................................................AGCTCTCGCAGTTTCG.................................16100.80800000000008000000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGCTGG....................................................................2950.80400000004000000000
........................................................................................................TGTAGCTGGCTGGACTTGTACTT......................................................2340.75300000000210000000
........................................................................................................TGTAGCTGGCTGGACTTGTACTTCA....................................................2540.75300000000300000000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCTA..........................................2540.75300000000210000000
........................................................................................ATC-TTCCCGGCCGCCTGTAGC.......................................................................2180.75600000000006000000
.......................................................................................CATC-TTCCCGGCCGCCTGTAGCTGG....................................................................2570.71500010004000000000
....................................................................................................................................................CATATACTTCCTTATGTCC---CGAT--GC...2530.67200010000000010000
.................................................................................................................CTGGACTTGTACTTCATGCAGCTCTCGCAGT.....................................3130.67200000010100000000
.......................................................................................................................................TCTCGCAGTTTCGCATATACTTCCTTA...................2730.67200000010010000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAT........................................................................2460.67400000000000040000
........................................................................CGGCACCTGTGTTAACATC-TTCCCGG..................................................................................2660.67400000020200000000
..........................................................................................................TAGCTGGCTGGACTTGTACTTCATG..................................................2530.67200000001100000000
........................................................................................................TGTAGCTGGCTGGACTTGTACTTCATGC.................................................2830.67200000020000000000
............................................................................................................................................CAGTTTCGCATATACTTCCTTATGTCC---...........2730.67200000010100000000
......................................................................................................................CTTGTACTTCATGCAGCTCTCGC........................................2360.67400000004000000000
............................................................................................................................................CAGTTTCGCATATACTTCCTTATG.................2430.67200000000200000000
.................................................................................................................................................TCGCATATACTTCCTTATGTCC---CGA........2530.67200010000010000000
......................................................................................................................................................TATACTTCCTTATGTCC---CGA........2030.67200000000200000000
......................................................................................................................CTTGTACTTCATGCAGCTCTCGCAGA.....................................2660.67400000004000000000
...............................................................................................................GGCTGGACTTGTACTTCATGCAGCT.............................................2530.67200000000000020000
.................................................................................................................................TGCAGCTCTCGCAGTTTCGCATA.............................2330.67200000000110000000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGCTGG....................................................................2760.67400000003010000000
..............................................................................................................................................GTTTCGCATATACTTCCTTATGTCC---CGA........2830.67200000010100000000
..............................................................................................................TGGCTGGACTTGTACTTCATGA.................................................2230.67200000000200000000
....................................................................................TAACATC-TTCCCGGCCGCC.............................................................................1960.67400000000004000000
....................................................................................................................................................CATATACTTCCTTATGTCC---CGAT--G....2430.67200000001010000000
........................................................................................................................TGTACTTCATGCAGCTCTCG.........................................2080.63500000000500000000
............................................................................................TTCCCGGCCGCCTGTAGCT......................................................................1980.63500000012200000000
......................................................................................ACATC-TTCCCGGCCGCCTGTAGCT......................................................................2480.63500000013100000000
......................................................................................ACATC-TTCCCGGCCGCCTGTAGC.......................................................................2380.63500010012100000000
..............................................................................................................................TCATGCAGCTCTCGCAGTTTC..................................2180.63500005000000000000
.......................................................................................CATC-TTCCCGGCCGCCTGTAGCT......................................................................2380.63500000004010000000
..............................................................................................................TGGCTGGACTTGTACTT......................................................1750.60300000000003000000
......................................................................................ACATC-TTCCCGGCCGCCTGTAGCTGGC...................................................................2770.57400000013000000000
........................................................................................................................TGTACTTCATGCAGCTCTCGCAGTTT...................................2670.57400010000111000000
............................................................................................TTCCCGGCCGCCTGTAGCTGGCT..................................................................2370.57400000000220000000
.......................................................................................CATC-TTCCCGGCCGCCTGTAGCTGGC...................................................................2670.57400000022000000000
........................................................................................ATC-TTCCCGGCCGCCTGTAGCTGGC...................................................................2570.57400000002200000000
................................................................................................................................ATGCAGCTCTCGCAGTTTCG.................................2090.56500000000005000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGCA......................................................................2660.50300000001200000000
....................................................................................TAACATC-TTCCCGGCCGCCTGTAGCC......................................................................2660.50300000020100000000
.........................................................................GGCACCTGTGTTAACATC-TTCCCGGC.................................................................................2660.50300000000300000000
..................................................................................................................TGGACTTGTACTTCATGCAGCTCAA..........................................2540.50200000000000020000
......................................................................................................................CTTGTACTTCATGCAGCTCTCGCAGT.....................................2660.50300000000210000000
..................................................................................................................TGGACTTGTACTTCATGC.................................................1840.50200000001010000000
...................................................................TCTTCCGGCACCTGTGTTAACATC-T........................................................................................2560.50300000002100000000
...............................................................................TGTGTTAACATC-TTCCCGGCCGCCTG...........................................................................2660.50300010000200000000
............................................................................................TTCCCGGCCGCCTGTAGC.......................................................................1880.50400000000004000000
.....................................................................................................................ACTTGTACTTCATGCAGCTCTCGCA.......................................2540.50200000000200000000
.................................................................................TGTTAACATC-TTCCCGGCCGCCTGTAGC.......................................................................2860.50300000021000000000
........................................................................................................TGTAGCTGGCTGGACTTGTACTTCAT...................................................2640.50200000010000010000
....................................................................................TAACATC-TTCCCGGCCGCCTGTATT.......................................................................2560.50300000000000030000
.....................................................................................................................ACTTGTACTTCATGCAGCTCTCGC........................................2440.50200000000101000000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTA.........................................................................2460.50300000001010001000
droSec2
GGCAGG-------------------------GGGCCCACGAAGTCTGCGCACACGGTTGCCCATGGTTCTTCCGGCACCTGTGTTAACATC-TTCCCGGCCGCCTGTAGCTGGCTGGACTTGTACTTCATGCACCTCTCGCAGTTTCGTACATACTTCCTTATGTCC---CGAT--GCATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGC.......................................................................26207.851571421140
...................................................................................TTAACATC-TTCCCGGCCGCCTGT..........................................................................23205.70114001086
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GCA..26192.895549042
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAG........................................................................25202.254542030
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GC...25192.114040000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--G....24191.583029010
...................................................................................TTAACATC-TTCCCGGCCGCCTG...........................................................................22201.503023070
...................................................................................TTAACATC-TTCCCGGCCGCCT............................................................................21201.302690170
...................................................................................TTAACATC-TTCCCGGCCGCCTGTA.........................................................................24201.002020000
...................................................................................TTAACATC-TTCCCGGCCGC..............................................................................19200.901810161
.............................................TGCGCACACGGTTGCCCATGGTTCTTC.............................................................................................................27200.751513020
.............................................TGCGCACACGGTTGCCCATGGTTCTT..............................................................................................................26200.4597020
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGT.......................................................................26200.4086020
.........................................AGTCTGCGCACACGGTTGCCCATGG...................................................................................................................25200.4088000
.....................................................................................................................................................ACATACTTCCTTATGTCC---CGAT--GCA..25200.3577000
...................................................................................TTAACATC-TTCCCGGCCGCC.............................................................................20200.3574021
.........................................AGTCTGCGCACACGGTTGCCCATGGT..................................................................................................................26200.3574030
....................................................................................TAACATC-TTCCCGGCCGCCTGTAG........................................................................24200.3066000
.......................................................................................................................................................ATACTTCCTTATGTCC---CGAT--GCATT25200.3063021
......................................CGAAGTCTGCGCACACGGTTGCCCA......................................................................................................................25200.2555000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGCT......................................................................27200.2555000
.........................................................TGCCCATGGTTCTTCCGGCACCTGTG..................................................................................................26200.2044000
.....................................................................................................................................................ACATACTTCCTTATGTCC---CGAT--G....23200.2044000
.......................................................................................................................................................ATACTTCCTTATGTCC---CGAT--GCA..23200.2043001
...........................................TCTGCGCACACGGTTGCCCATGGT..................................................................................................................24200.2044000
..................................................................................GTTAACATC-TTCCCGGCCGCCTGT..........................................................................24200.2041030
.....................................................................................................................................................ACATACTTCCTTATGTCC---CGAT--GC...24200.2044000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GCT..26190.1633000
.........................................................TGCCCATGGTTCTTCCGGCACCTGT...................................................................................................25200.1533000
.......................................................................................................................................................ATACTTCCTTATGTCC---CGAT--GCAT.24200.1533000
.........................................AGTCTGCGCACACGGTTGCCCATG....................................................................................................................24200.1533000
........................................................................CGGCACCTGTGTTAACATC-TTCCCGGC.................................................................................27200.1533000
..................................................................................GTTAACATC-TTCCCGGCCGCCT............................................................................22200.1531020
....................................CACGAAGTCTGCGCACACGGTTGCCCA......................................................................................................................27200.1533000
............................................................................ACCTGTGTTAACATC-TTCCCGGCCGCC.............................................................................27200.1533000
.......................................GAAGTCTGCGCACACGGTTGCCC.......................................................................................................................23200.1533000
.....................................................................................................................................................ACATACTTCCTTATGTCC---CGAT--GT...24200.1533000
........................................................................................................................................CTCGCAGTTTCGTACATACTTCCTTA...................2690.1111000
.......................................................................................................................................TCTCGCAGTTTCGTACATACTTCCT.....................2590.1110010
.........................................................................................................................................TCGCAGTTTCGTACATACTTCCTTATGT................2890.1111000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGA........22190.1122000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GCAT.27190.1122000
..........................................GTCTGCGCACACGGTTGCCCATGGT..................................................................................................................25200.1022000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGA.......................................................................26200.1022000
.....................................................................................AACATC-TTCCCGGCCGCCTGTAGC.......................................................................24200.1022000
.................................................................................TGTTAACATC-TTCCCGGCCGCCT............................................................................23200.1020020
....................................................................................TAACATC-TTCCCGGCCGCCT............................................................................20200.1022000
..............................................................................................................TGGCTGGACTTGTACTTCATGC.................................................22200.1022000
...........................................TCTGCGCACACGGTTGCCCATGGTTCTT..............................................................................................................28200.1021010
..................................................................................GTTAACATC-TTCCCGGCCGCCTGTAGC.......................................................................27200.1022000
..................................................................................GTTAACATC-TTCCCGGCCGCC.............................................................................21200.1021010
.........................................................................GGCACCTGTGTTAACATC-TTCCCGGC.................................................................................26200.1022000
....................................................................................TAACATC-TTCCCGGCCGCCTGT..........................................................................22200.1022000
.............................................TGCGCACACGGTTGCCCATGGTTCT...............................................................................................................25200.1022000
...................................................................TCTTCCGGCACCTGTGTTAACATC-.........................................................................................24200.1022000
.........................................................TGCCCATGGTTCTTCCGGCACCTGTGT.................................................................................................27200.1022000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GT...25190.0511000
....................................................................................................................................................TACATACTTCCTTATGTCC---CAT........22190.0511000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--.....23190.0511000
...................................................................................................................................................GTACATACTTCCTTATGTCC---CGAT--G....25190.0511000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GCAA.27190.0511000
..................................................................................................................................................CGTACATACTTCCTTATGTCC---CGAT--G....26190.0511000
....................................................................................................................................................TACATACTTCCTTATGTCC---CG.........21190.0511000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--GCAC.27190.0511000
....................................................................................................................................................TACATACTTCCTTATGTCC---CGAT--T....24190.0511000
.........................................................................................................................................................ACTTCCTTATGTCC---CGAT--GCG..21200.0511000
...................................CCACGAAGTCTGCGCACACGGTTGCCCA......................................................................................................................28200.0511000
...........................................TCTGCGCACACGGTTGCCCATGGTTC................................................................................................................26200.0511000
.......................................................................................................................................................ATACTTCCTTATGTCC---CG.........18200.0511000
.....................................................................TTCCGGCACCTGTGTTAACATC-.........................................................................................22200.0511000
........................................................................................ATC-TTCCCGGCCGCCTGTAGC.......................................................................21200.0511000
.................................................CACACGGTTGCCCATGGTTCT...............................................................................................................21200.0510010
.........................................AGTCTGCGCACACGGTTGCCCAT.....................................................................................................................23200.0511000
...................................CCACGAAGTCTGCGCACACGGTTGCC........................................................................................................................26200.0511000
.......................................................................................CATC-TTCCCGGCCGCCTGT..........................................................................19200.0510010
.............................................................................................TCCCGGCCGCCTGTAGCTGGCTG.................................................................23200.0510010
.......................................GAAGTCTGCGCACACGGTTGCCCATGG...................................................................................................................27200.0511000
..................................CCCACGAAGTCTGCGCACACGGTTGCC........................................................................................................................27200.0511000
....................................................ACGGTTGCCCATGGTTCTTCCGGCAC.......................................................................................................26200.0511000
............................................................................ACCTGTGTTAACATC-TTCCCGGCCGC..............................................................................26200.0511000
.............................................................CATGGTTCTTCCGGCACCTGTGTTA...............................................................................................25200.0511000
..................................................................................GTTAACATC-TTCCCGGCCGCCTG...........................................................................23200.0511000
.....................................ACGAAGTCTGCGCACACGGTTGCCCA......................................................................................................................26200.0511000
............................................................................................TTCCCGGCCGCCTGTAGCTGGCTGGA...............................................................26200.0511000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAT........................................................................25200.0511000
.......................................................................................................................................................ATACTTCCTTATGTCC---CGAT--GCT..23200.0510010
...........................................................................................................AGCTGGCTGGACTTGTACTTCATGC.................................................25200.0511000
..............................................GCGCACACGGTTGCCCATGGTTC................................................................................................................23200.0511000
...AGG-------------------------GGGCCCACGAAGTCTGCGCACACGG.............................................................................................................................28200.0511000
........................................................................................ATC-TTCCCGGCCGCCTGTAGA.......................................................................21200.0510010
.......................................................................................................................................................ATACTTCCTTATGTCC---CGAT--GC...22200.0511000
........................................................TTGCCCATGGTTCTTCCGGCA........................................................................................................21200.0511000
..................................CCCACGAAGTCTGCGCACACGGTTGCCCA......................................................................................................................29200.0511000
...............................................................................TGTGTTAACATC-TTCCCGGCCGCCTG...........................................................................26200.0511000
.................................GCCCACGAAGTCTGCGCACACGGT............................................................................................................................24200.0510010
.......................................................................................CATC-TTCCCGGCCGCCTGTAGCTGGC...................................................................26200.0511000
........................................................TTGCCCATGGTTCTTCCGGCACCTG....................................................................................................25200.0511000
...........................................TCTGCGCACACGGTTGCCCATG....................................................................................................................22200.0510010
..................................................................TTCTTCCGGCACCTGTGTTAACATC-.........................................................................................25200.0510010
.................................................................................TGTTAACATC-TTCCCGGCCGCCTGT..........................................................................25200.0510010
................................GGCCCACGAAGTCTGCGCACACGGT............................................................................................................................25200.0511000
......................................................................TCCGGCACCTGTGTTAACATC-TTCCCGGC.................................................................................29200.0511000
.......................................GAAGTCTGCGCACACGGTTGCCCATGGT..................................................................................................................28200.0511000
..............................................................................CTGTGTTAACATC-TTCCCGGCCGC..............................................................................24200.0511000
......................................................................................ACATC-TTCCCGGCCGCCTGT..........................................................................20200.0510010
.............................................TGCGCACACGGTTGCCCATGGTTC................................................................................................................24200.0511000
...................................................................................TTAACATC-TTCCCGGCCGCCTGTAGTCT.....................................................................28200.0511000
.......................................GAAGTCTGCGCACACGGTTGCCCA......................................................................................................................24200.0511000
................................................................GGTTCTTCCGGCACCTGTG..................................................................................................19200.0511000
........................................AAGTCTGCGCACACGGTTGCCCATGG...................................................................................................................26200.0511000
..........................................GTCTGCGCACACGGTTGCCCATGGC..................................................................................................................25200.0511000
......................................................................TCCGGCACCTGTGTTAACATC-.........................................................................................21200.0511000
.......................................GAAGTCTGCGCACACGGTTGCCCAT.....................................................................................................................25200.0511000
......................................CGAAGTCTGCGCACACGGTTGC.........................................................................................................................22200.0510010
...........................................TCTGCGCACACGGTTGCCCATGG...................................................................................................................23200.0511000
..........................................................GCCCATGGTTCTTCCGGCACCTG....................................................................................................23200.0511000
................................................................................GTGTTAACATC-TTCCCGGCCG...............................................................................21200.0511000
.........................................................TGCCCATGGTTCTTCCGGCACCT.....................................................................................................23200.0511000
..................................................................................GTTAACATC-TTCCCGGCCGC..............................................................................20200.0510010
........................................................................................................TGTAGCTGGCTGGACTTGTAC........................................................21200.0510010
.......................................GAAGTCTGCGCACACGGTTGCCCATGGA..................................................................................................................28200.0511000
...............................................................TGGTTCTTCCGGCACCTGTGTTAACATC-.........................................................................................28200.0511000
GGCAGG-------------------------GGGCCCACGAAGTCTGCGCA..................................................................................................................................26200.0510010
...............................................................TGGTTCTTCCGGCACCTGTG..................................................................................................20200.0511000
......................................CGAAGTCTGCGCACACGGTTGCCCATGG...................................................................................................................28200.0511000
........................................................................CGGCACCTGTGTTAACATC-TTCCCGG..................................................................................26200.0511000
...................................CCACGAAGTCTGCGCACACGG.............................................................................................................................21200.0510010
droYak3
GGCAAG-------------------------GGGCCCACAAAGTCCGCACATACGGTGGCCCATGGTTC----------TGTGTCAGCATT-TTCCCGGCTGCTTGCAGCTGGTTGGGCTTGTATCTCATGCAGCTCTCGCAGTTCCTCACGTATTTCCTGACGTCT---CGGT--GCATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCCTCACG.............................2769.67580430000000015
.......................................................................................................................TTGTATCTCATGCAGCTCTCGCAGT.....................................2564.6728022510000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTG...........................................................................24163.9463063000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTGCA.........................................................................26143.4348048000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCTTG...........................................................................26162.9447047000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTGCAG........................................................................27142.6437027010000009
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTGCAGC.......................................................................2822.50501400000000
....................................CACAAAGTCCGCACATACGGTGGCC........................................................................................................................25192.05390156200000016
...................................................................................TCAGCATT-TTCCCGGCTGCTTGCAGC.......................................................................2622.00401300000000
........................................................................................................................TGTATCTCATGCAGCTCTCGCAGTTCC..................................2762.0012011100000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GCATT24151.73260101600000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTGC..........................................................................25141.7124020400000000
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCCTCA...............................2561.6710010000000000
..............................................................................................................TGGTTGGGCTTGTATCTCATGCAGC..............................................2561.50905400000000
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCCTCAC..............................2661.33807100000000
.......................................................................................................................TTGTATCTCATGCAGCTCTCGCAGTTC...................................2761.33808000000000
...........................................TCCGCACATACGGTGGCCCATGGTTC----------......................................................................................................2651.20606000000000
................................................................................................................................................TCCTCACGTATTTCCTGACGTCT---CGG........2661.17707000000000
.......................................................................................................................TTGTATCTCATGCAGCTCTCGCAGTTCC..................................2861.17707000000000
..............................................................................................................................TCATGCAGCTCTCGCAGTTCCTCACG.............................2671.14808000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCT.............................................................................24161.0617014300000000
...................................................TACGGTGGCCCATGGTTC----------TGTGTCAG..............................................................................................2611.00101000000000
.......................................................................................................................TTGTATCTCATGCAGCTCTCGCAGTT....................................2661.00604200000000
...................................................TACGGTGGCCCATGGTTC----------TGTGTCAGC.............................................................................................2711.00101000000000
...................................................................................................................................................TCACGTATTTCCTGACGTCT---CGGT--GCA..2761.00606000000000
...................................................................TC----------TGTGTCAGCATT-TTCCCGGCTGC..............................................................................2511.00100100000000
...............................................................TGGTTC----------TGTGTCAGCATT-TTCCCGGC.................................................................................2611.00101000000000
....................................CACAAAGTCCGCACATACGGTGGCCC.......................................................................................................................26190.841609700000000
................................................................................................................................................TCCTCACGTATTTCCTGACGTCT---CGGT--.....2760.83502000000003
........................................................................................................................TGTATCTCATGCAGCTCTCGCAGT.....................................2460.83505000000000
...........................................TCCGCACATACGGTGGCCCATGGTTC----------T.....................................................................................................2750.80404000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGC..............................................................................23160.751203900000000
........................................................................................................................TGTATCTCATGCAGCTCTCGCAGTTC...................................2660.67404000000000
....................................................................................................TGCTTGCAGCTGGTTGGGCTTGTATC.......................................................2650.60302100000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCTTGC..........................................................................27140.57808000000000
......................................................................................................................................................CGTATTTCCTGACGTCT---CGGT--GCA..24150.53817000000000
..................................................................................GTCAGCATT-TTCCCGGCTGCTTG...........................................................................23160.50808000000000
...............................................................................................................................................TTCCTCACGTATTTCCTGACGTCT---CGG........2760.50303000000000
................................................................................................................................................TCCTCACGTATTTCCTGACGTCT---CGGT--G....2860.50303000000000
............................................................................................................................TCTCATGCAGCTCTCGCAGTTCCTCACG.............................2860.50303000000000
....................................................................C----------TGTGTCAGCATT-TTCCCGGCTG...............................................................................23160.44707000000000
.................................................................................................................................TGCAGCTCTCGCAGTTCCTCACGTA...........................2570.43303000000000
..................................CCCACAAAGTCCGCACATACGGTGGCC........................................................................................................................27190.42804400000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GCAT.23150.40603300000000
...........................................TCCGCACATACGGTGGCCCATGGTT.................................................................................................................2550.40202000000000
....................................................................C----------TGTGTCAGCATT-TTCCCGGCTGC..............................................................................24160.38604200000000
......................................................................................................................................................CGTATTTCCTGACGTCT---CGGT--GCAT.25150.33504100000000
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCCTCACGT............................2860.33202000000000
........................................................................................................................TGTATCTCATGCAGCTCTCGCAGTTCCT.................................2860.33202000000000
....................................................................................................TGCTTGCAGCTGGTTGGGCTTGTA.........................................................24120.33404000000000
........................................................................................................................TGTATCTCATGCAGCTCTCGCAGTT....................................2560.33202000000000
...................................................................................................................................................TCACGTATTTCCTGACGTCT---CGGT--G....2560.33202000000000
................................................................................GTGTCAGCATT-TTCCCGGCTGCTTG...........................................................................25160.31505000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCTT............................................................................25160.31505000000000
........................................................................................................................................................TATTTCCTGACGTCT---...........15160.31500000000005
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GCA..22150.27403100000000
.......................................AAAGTCCGCACATACGGTGGCCC.......................................................................................................................23190.26500000000005
....................................CACAAAGTCCGCACATACGGTGGCCCA......................................................................................................................27190.26505000000000
...................................................................................TCAGCATT-TTCCCGGCTGCTTGCA.........................................................................24140.21303000000000
..................................................................................GTCAGCATT-TTCCCGGCTGCTTGCA.........................................................................25140.21303000000000
.....................................ACAAAGTCCGCACATACGGTGGCCCATC....................................................................................................................2850.20101000000000
........................................................................................................TGCAGCTGGTTGGGCTTGTATCTCATGC.................................................2850.20101000000000
..........................................................................................................CAGCTGGTTGGGCTTGTATCTCATGCA................................................2750.20101000000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GCATC24150.20300300000000
........................................................................................................TGCAGCTGGTTGGGCTTGTATCTCATG..................................................2750.20101000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCT................................................................................21160.19301200000000
....................................................................C----------TGTGTCAGCATT-TTCCCGGCTGCT.............................................................................25160.19303000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCC................................................................................21160.19300300000000
...................................................................................................................................................TCACGTATTTCCTGACGTCT---CGGT--GC...2660.17100100000000
.......................................................................................................................................TCTCGCAGTTCCTCACGTATTTCCT.....................2560.17101000000000
.................................................................................................................................................CCTCACGTATTTCCTGACGTCT---CGG........2560.17101000000000
....................................................................................................................................................CACGTATTTCCTGACGTCT---CGGT--GC...2560.17101000000000
.......................................................................................................................TTGTATCTCATGCAGCTCTCGCAG......................................2460.17101000000000
..............................................................................................................TGGTTGGGCTTGTATCTCATGCA................................................2360.17101000000000
.......................................................................................................................TTGTATCTCATGCAGCTCTCGCAGTTCT..................................2860.17101000000000
............................................................................................................................TCTCATGCAGCTCTCGCAGTTCCTCA...............................2660.17101000000000
..........................................................................................................................................CGCAGTTCCTCACGTATTTCCTGACGTC...............2860.17101000000000
..................................................................................................................................................CTCACGTATTTCCTGACGTCT---CGGT--G....2660.17101000000000
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCCT.................................2360.17101000000000
.......................................................................................................................................TCTCGCAGTTCCTCACGTATTTCC......................2460.17101000000000
........................................................................................................................TGTATCTCATGCAGCTCTCGCAGTTCCC.................................2860.17100100000000
..........................................................................................................................TATCTCATGCAGCTCTCGCAGTTCC..................................2560.17101000000000
.............................................................................................................CTGGTTGGGCTTGTATCTCATGCAGC..............................................2660.17101000000000
................................................................................................................................................TCCTCACGTATTTCCTGACG.................2060.17101000000000
....................................................................................................................................................CACGTATTTCCTGACGTCT---CGG........2260.17101000000000
.........................................................................................................................GTATCTCATGCAGCTCTCGCAGTTC...................................2560.17101000000000
................................................................................................................................................TCCTCACGTATTTCCTGACGTCT---CG.........2560.17101000000000
..........................................................................................................................TATCTCATGCAGCTCTCGCAGTTCCT.................................2660.17100100000000
.......................................................................................................................................TCTCGCAGTTCCTCACGTATTTC.......................2360.17101000000000
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCCTCACGTA...........................2960.17101000000000
...................................................................................................................................................TCACGTATTTCCTGACGTCT---CGG........2360.17101000000000
.....................................ACAAAGTCCGCACATACGGTGGCCC.......................................................................................................................25190.16303000000000
..............................................................................................................................TCATGCAGCTCTCGCAGTTCCT.................................22200.15302100000000
.................................................................................................................................TGCAGCTCTCGCAGTTCCTCACGTATT.........................2770.14101000000000
...................................................................................TCAGCATT-TTCCCGGCTGCTTGCAG........................................................................25140.14202000000000
...............................................................................................................................CATGCAGCTCTCGCAGTTCCTCACG.............................2570.14101000000000
......................................................................................................................................................CGTATTTCCTGACGTCT---CGGT--GCATT26150.13202000000000
..........................................................................................................................................................TTTCCTGACGTCT---CGGT--GCAT.21150.13200200000000
..........................................................................................................................................................TTTCCTGACGTCT---CGGT--GCATT22150.13201100000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GC...21150.13201100000000
.....................................................................................................................................................ACGTATTTCCTGACGTCT---CGGT--GC...24150.13201100000000
.............................................................................................................................CTCATGCAGCTCTCGCAGTTCC..................................2280.13101000000000
.................................................................................TGTCAGCATT-TTCCCGGCTG...............................................................................20160.13202000000000
....AG-------------------------GGGCCCACAAAGTCCGCACATACGG.............................................................................................................................2780.13101000000000
...........................................TCCGCACATACGGTGGC.........................................................................................................................17190.11200000000002
...........................................TCCGCACATACGGTGGCC........................................................................................................................18190.11200000000002
....................................CACAAAGTCCGCACATACGGTGGC.........................................................................................................................24190.11200200000000
................................................................................................CGGCTGCTTGCAGCTGGTTGGGCTTG...........................................................26120.08101000000000
....................................................................................CAGCATT-TTCCCGGCTGCTTGCAG........................................................................24140.07101000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCTTGCA.........................................................................28140.07101000000000
..................................................................................GTCAGCATT-TTCCCGGCTGCTTGCAG........................................................................26140.07101000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTGCACG.......................................................................28140.07101000000000
........................................................................................................TGCAGCTGGTTGGGCTTGTA.........................................................20140.07101000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTGCAC........................................................................27140.07100100000000
..................................................................................GTCAGCATT-TTCCCGGCTGCTTGC..........................................................................24140.07101000000000
.....................................................................................AGCATT-TTCCCGGCTGCTTGCAG........................................................................23150.07101000000000
..........................................................................................................................................................TTTCCTGACGTCT---CGGT--GC...19150.07100100000000
......................................................................................................................................................CGTATTTCCTGACGTCT---CGGT--G....22150.07100100000000
.....................................................................................................................................................ACGTATTTCCTGACGTCT---CGGT--GCA..25150.07101000000000
...........................................................................................................................................................TTCCTGACGTCT---CGGT--GCA..19150.07101000000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--.....19150.07100100000000
............................................................................................................................................................TCCTGACGTCT---CGGT--GCATT20150.07100100000000
.....................................................................................................................................................ACGTATTTCCTGACGTCT---CGG........21150.07101000000000
....................................................................................................TGCTTGCAGCTGGTTGGGC..............................................................19150.07100100000000
.....................................................................................................................................................ACGTATTTCCTGACGTCT---CGGT--G....23150.07101000000000
.........................................................................................................................................................ATTTCCTGACGTCT---CGGT--GC...20150.07101000000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GCAC.23150.07100100000000
.......................................................................................................................................................GTATTTCCTGACGTCT---CGGT--GC...22150.07101000000000
....................................................................................................TGCTTGCAGCTGGTTGGGCTATA..........................................................23150.07101000000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--T....20150.07100100000000
..........................................................................................................................................................TTTCCTGACGTCT---CGGT--GCAC.21150.07100100000000
.........................................................................................................................................................ATTTCCTGACGTCT---CGGT--GCATT23150.07101000000000
........................................................................................................................................................TATTTCCTGACGTCT---CGGT--GCATA24150.07101000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGC..............................................................................21160.06100100000000
....................................................................C----------TGTGTCAGCATT-TTCCC....................................................................................18160.06101000000000
....................................................................C----------TGTGTCAGCATT-TTCCCGGCT................................................................................22160.06101000000000
....................................................................C----------TGTGTCAGCATT-TTCCCGGC.................................................................................21160.06100100000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTG...............................................................................22160.06101000000000
....................................................................C----------TGTGTCAGCATT-TTCCCGGCTGCTTG...........................................................................27160.06101000000000
..................................................................................GTCAGCATT-TTCCCGGCTGCTT............................................................................22160.06101000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTTC...........................................................................24160.06101000000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCTT............................................................................23160.06101000000000
................................................................................GTGTCAGCATT-TTCCCGGCTGCTG............................................................................24160.06101000000000
...............................................................................TGTGTCAGCATT-TTCCCGGC.................................................................................20160.06100100000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCTTT...........................................................................26160.06100010000000
.................................................................................TGTCAGCATT-TTCCCGGCTGCT.............................................................................22160.06100100000000
................................................................................GTGTCAGCATT-TTCCCGGCTGCC.............................................................................23170.06100100000000
.......................................................................................CATT-TTCCCGGCTGCTTG...........................................................................18170.06101000000000
...............................................................................TGTGTCAGCATT-TTCCCGGCTGCC.............................................................................24170.06100100000000
......................................CAAAGTCCGCACATACGGTGGCCCA......................................................................................................................25190.05101000000000
..................................CCCACAAAGTCCGCACATACGGTGGCCC.......................................................................................................................28190.05100100000000
......................................CAAAGTCCGCACATACGGTGGCCC.......................................................................................................................24190.05101000000000
..................................CCCACAAAGTCCGCACATACGGTGGCCCA......................................................................................................................29190.05101000000000
.....................................ACAAAGTCCGCACATACGGTGGCC........................................................................................................................24190.05101000000000
....................................CACAAAGTCCGCACATACGGTGG..........................................................................................................................23190.05101000000000
...................................CCACAAAGTCCGCACATACGGTGGCCC.......................................................................................................................27190.05100100000000
........................................AAGTCCGCACATACGGTGGCCC.......................................................................................................................22190.05100100000000
....................................CACAAAGTCCGCACATACGGTGGCCT.......................................................................................................................26190.05100010000000
......................................CAAAGTCCGCACATACGGTGGCC........................................................................................................................23190.05101000000000
.....................................ACAAAGTCCGCACATACGGTGGCCCA......................................................................................................................26190.05100000000001
...........................................TCCGCACATACGGTGGCCC.......................................................................................................................19190.05101000000000
....................................CACAAAGTCCGCACATACGGTGGCCCC......................................................................................................................27190.05100000100000
...................................CCACAAAGTCCGCACATACGGTGGCC........................................................................................................................26190.05100100000000
.....................................ACAAAGTCCGCACATACGGTGGC.........................................................................................................................23190.05101000000000
...................................CCACAAAGTCCGCACATACGGTGGC.........................................................................................................................25190.05101000000000
...............................................................................................................................CATGCAGCTCTCGCAGTT....................................18200.05101000000000
..............................................................................................................................TCATGCAGCTCTCGCAGTTCC..................................21200.05101000000000
.................................................................................................................................TGCAGCTCTCGCAGTTCCT.................................19200.05100100000000
...............................GGGCCCACAAAGTCCGCACATACGGT............................................................................................................................26200.05101000000000
.................................GCCCACAAAGTCCGCACAT.................................................................................................................................19200.05101000000000
droEre2
GACCAGCAGCATCGAATTCGTCCGTGGCAATGGTCCCACGAAATCCGCACACACGGTGGCCCATGGCTCCTCCGGCACCTAGGTCTGTATT-TTCCCGGCTGCCTGTAGTTGGTTCGGCTTATACTTCATGCAGCTTTCGCAGCTCCGCACATATTTCCGTGTGTCC---CGGT--GCATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGC.....................................251420.072812691100010
.............................................................................................................TTGGTTCGGCTTATACTTCATGCAGC..............................................26145.3675320010042
...........................................TCCGCACACACGGTGGCCCATGGCTCC...............................................................................................................27124.585551201001
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGCTC...................................27143.575050000000
.............................................................................................................TTGGTTCGGCTTATACTTCATGCAGCT.............................................27141.642318000302
........................................................................................................................TATACTTCATGCAGCTTTCGCAGC.....................................24151.131717000000
....................................CACGAAATCCGCACACACGGTGGCC........................................................................................................................25131.001313000000
....................................CACGAAATCCGCACACACGGTGGCCC.......................................................................................................................26121.00127200003
.....GCAGCATCGAATTCGTCCGTGGC.........................................................................................................................................................2311.0010000100
............................................CCGCACACACGGTGGCCCATGGCTCCT..............................................................................................................27110.8290000009
.............................................................................................................TTGGTTCGGCTTATACTTCATGCAG...............................................25140.79119000200
...........................................TCCGCACACACGGTGGCCCATGGCTC................................................................................................................26120.7598100000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAG......................................24140.5788000000
....................................CACGAAATCCGCACACACGGTGGCCCA......................................................................................................................27120.5066000000
....................................................................................................TGCCTGTAGTTGGTTCGGCTTATAC........................................................2560.5033000000
.............................................................................................................TTGGTTCGGCTTATACTTCATGCAGCTT............................................28140.5073000004
..........................................................................................................TAGTTGGTTCGGCTTATACTTCATG..................................................25140.4365000100
...........................................TCCGCACACACGGTGGCCCATGGCT.................................................................................................................25120.4255000000
..........................................................................................................TAGTTGGTTCGGCTTATACTTCATGC.................................................26130.3855000000
...........................................TCCGCACACACGGTGGCCCATGGC..................................................................................................................24140.3655000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGCT....................................26140.3655000000
......................................................................................................................CTTATACTTCATGCAGCTTTCGCAGC.....................................26140.3654000100
..........................................................................................................................TACTTCATGCAGCTTTCGCAGCTCC..................................25150.3355000000
............................................................................................TTCCCGGCTGCCTGTAGTTGGTTCGGC..............................................................2770.2921000001
............................................................................................TTCCCGGCTGCCTGTAGTTGGTTCG................................................................2570.2922000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGCTCC..................................28140.2944000000
............................................................................................TTCCCGGCTGCCTGTAGTTGGTTCGG...............................................................2670.2922000000
........................................................................................................................TATACTTCATGCAGCTTTCGCAGCTC...................................26150.2744000000
...........................................TCCGCACACACGGTGGCCCATG....................................................................................................................22160.2544000000
....................................CACGAAATCCGCACACACGGTGG..........................................................................................................................23140.2133000000
.................................................................................................................TTCGGCTTATACTTCATGCAGCTTT...........................................25140.2133000000
........................................................................................................TGTAGTTGGTTCGGCTTATACTTCATG..................................................27140.2133000000
.................................TCCCACGAAATCCGCACACACGGTGGCCC.......................................................................................................................29100.2021100000
..........................................................................................................TAGTTGGTTCGGCTTATACTTCA....................................................23150.2033000000
..........................................................................................................................TACTTCATGCAGCTTTCGCAGCTCCG.................................26150.2033000000
...........................................TCCGCACACACGGTGGCCCATGG...................................................................................................................23160.1933000000
.................................TCCCACGAAATCCGCACACACGGTGG..........................................................................................................................26110.1822000000
...........................................TCCGCACACACGGTGGCCC.......................................................................................................................19170.1833000000
.....................................ACGAAATCCGCACACACGGTGGCCCA......................................................................................................................26120.1722000000
............................................CCGCACACACGGTGGCCCATGGCTCC...............................................................................................................26120.1722000000
..........................................................................................................TAGTTGGTTCGGCTTATACTTCATGCAGC..............................................29120.1721100000
......................................CGAAATCCGCACACACGGTGGCCC.......................................................................................................................24120.1722000000
.................................TCCCACGAAATCCGCACACACGGTG...........................................................................................................................25120.1722000000
..........................................................................................T-TTCCCGGCTGCCTGTAGTTGGTTCG................................................................2670.1411000000
.........................................................................................................GTAGTTGGTTCGGCTTATACTTCATG..................................................26140.1422000000
............................................................................................TTCCCGGCTGCCTGTAGTTGGTTCGGCT.............................................................2870.1411000000
.............................................................................................TCCCGGCTGCCTGTAGTTGGTTCGGCT.............................................................2770.1410100000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGCTA...................................27140.1422000000
.............................................................................................TCCCGGCTGCCTGTAGTTGGTTCGG...............................................................2570.1411000000
...............................................................................................CCGGCTGCCTGTAGTTGGTTCGGC..............................................................2470.1411000000
................................................................................................CGGCTGCCTGTAGTTGGTTCGG...............................................................2270.1411000000
.............................................................................................TCCCGGCTGCCTGTAGTTGGTTCGGC..............................................................2670.1411000000
........................................................................................................................TATACTTCATGCAGCTTTCGCAGCTCC..................................27150.1322000000
.........................................................................................................GTAGTTGGTTCGGCTTATACTTCAT...................................................25150.1320000002
..............................................................................................................TGGTTCGGCTTATACTTCATGCAGC..............................................25150.1322000000
.........................................................................................TT-TTCCCGGCTGCCTGTAGTT......................................................................2180.1311000000
............................................................................................TTCCCGGCTGCCTGTAGTTGGTTC.................................................................2480.1311000000
............................................................................................TTCCCGGCTGCCTGTAGTTGGT...................................................................2280.1310000100
.........................................................................................TT-TTCCCGGCTGCCTGTAGTTG.....................................................................2280.1311000000
.........................................................................................TT-TTCCCGGCTGCCTGTAGT.......................................................................2080.1311000000
.............................................................................................TCCCGGCTGCCTGTAGTTGGTT..................................................................2280.1311000000
.......................................................GTGGCCCATGGCTCCTCCGGCACC......................................................................................................24160.1322000000
....................................................................................................TGCCTGTAGTTGGTTCGGCTTATA.........................................................2490.1111000000
.............................................................................................TCCCGGCTGCCTGTAGTTGGTTATA...............................................................2590.1111000000
.................................TCCCACGAAATCCGCACACACGGTGGC.........................................................................................................................27110.0911000000
.................................TCCCACGAAATCCGCACACACGGTGGCC........................................................................................................................28110.0911000000
.............................................CGCACACACGGTGGCCCATGGCTCCT..............................................................................................................26110.0911000000
..................................CCCACGAAATCCGCACACACGGTGGCCC.......................................................................................................................28110.0911000000
...........................................TCCGCACACACGGTGGCCCATGGCTCCT..............................................................................................................28110.0911000000
...............................GGTCCCACGAAATCCGCACACACGG.............................................................................................................................25120.0811000000
............................................CCGCACACACGGTGGCCCATGGCT.................................................................................................................24120.0811000000
........................................AAATCCGCACACACGGTGGCCCATGGC..................................................................................................................27120.0810100000
.............................................CGCACACACGGTGGCCCATGGCTCC...............................................................................................................25120.0811000000
...............................GGTCCCACGAAATCCGCACACACGGTG...........................................................................................................................27120.0811000000
.................................TCCCACGAAATCCGCACACACGG.............................................................................................................................23120.0811000000
.................................TCCCACGAAATCCGCACACACGGT............................................................................................................................24120.0811000000
..................................CCCACGAAATCCGCACACACGGTGG..........................................................................................................................25120.0811000000
............................................................................................................GTTGGTTCGGCTTATACTTCATGCAG...............................................26130.0811000000
...................................................CACGGTGGCCCATGGCTCCTCCGGCACC......................................................................................................28130.0811000000
..........................................ATCCGCACACACGGTGGCCCATGGC..................................................................................................................25130.0811000000
...........................................................................................................AGTTGGTTCGGCTTATACTTCATGC.................................................25130.0811000000
.......................................................................................................CTGTAGTTGGTTCGGCTTATACTA......................................................24130.0811000000
.....................................ACGAAATCCGCACACACGGTGGCC........................................................................................................................24130.0811000000
......................................CGAAATCCGCACACACGGTGGCC........................................................................................................................23130.0811000000
........................................................................................................TGTAGTTGGTTCGGCTTATACTTCATGC.................................................28130.0811000000
.........................................................................................................GTAGTTGGTTCGGCTTATACTTCATGC.................................................27130.0811000000
...................................CCACGAAATCCGCACACACGGTGGCC........................................................................................................................26130.0811000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCA.......................................23140.0711000000
.................................................CACACGGTGGCCCATGGCTCCTCCG...........................................................................................................25140.0711000000
...................................................CACGGTGGCCCATGGCTCCTCCGGCT........................................................................................................26140.0711000000
.............................................CGCACACACGGTGGCCCATGGC..................................................................................................................22140.0711000000
..............................................................................................................TGGTTCGGCTTATACTTCATGCAGCTTT...........................................28140.0711000000
..................................................ACACGGTGGCCCATGGCTCCTCCGGCA........................................................................................................27140.0711000000
.......................................................................................................................TTATACTTCATGCAGCTTTCG.........................................21140.0711000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGA.....................................25140.0711000000
.................................................CACACGGTGGCCCATGGCTCCTCCGGT.........................................................................................................27140.0711000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGAAA...................................27140.0711000000
.......................................GAAATCCGCACACACGGTGGCCCA......................................................................................................................24140.0711000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGCTCCG.................................29140.0711000000
...................................................CACGGTGGCCCATGGCTCCTCCGG..........................................................................................................24140.0711000000
.................................................CACACGGTGGCCCATGGCTCCTCCGGCA........................................................................................................28140.0711000000
...................................................CACGGTGGCCCATGGCTCCTCCGGC.........................................................................................................25140.0711000000
......................................................................................................................CTTATACTTCATGCAGCTTTCGCAGCTC...................................28140.0711000000
....................................CACGAAATCCGCACACACGGTGGC.........................................................................................................................24140.0711000000
.............................................................................................................TTGGTTCGGCTTATACTTCATGCA................................................24150.0711000000
..............................................................................................................TGGTTCGGCTTATACTTCATGCAG...............................................24150.0711000000
..............................................................................................................TGGTTCGGCTTATACTTCATGCAGCTT............................................27150.0711000000
.........................................................................................................................ATACTTCATGCAGCTTTCGCAGC.....................................23150.0711000000
........................................................................................................................TATACTTCATGCAGCTTTCGCAG......................................23150.0711000000
..........................................................................................................................TACTTCATGCAGCTTTCGCAGCTCCGCA...............................28150.0711000000
.........................................................................................................................ATACTTCATGCAGCTTTCGCAGCTCC..................................26150.0711000000
.............................................................................................................................TTCATGCAGCTTTCGCAGCTCCGC................................24150.0711000000
..........................................................................................................................TACTTCATGCAGCTTTCGCAGC.....................................22150.0711000000
........................................................................................................................TATACTTCATGCAGCTTTCGCAGCTA...................................26150.0711000000
........................................................................................................TGTAGTTGGTTCGGCTTATACTTC.....................................................24150.0710000001
............................................................................................................................CTTCATGCAGCTTTCGCAGCTCCGCA...............................26150.0711000000
........................................................................................................................TATACTTCATGCAGCTTTCG.........................................20150.0711000000
........................................................................................................................TATACTTCATGCAGCTTTCGCAGCT....................................25150.0711000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGT.....................................25150.0711000000
...........................................................................................................................ACTTCATGCAGCTTTCGCAGC.....................................21150.0711000000
.................................................................................................................TTCGGCTTATACTTCATGCAGCTT............................................24150.0711000000
............................................................................................................................CTTCATGCAGCTTTCGCAGCTCC..................................23150.0711000000
..............................................................................................................TGGTTCGGCTTATACTTCATGCAGCT.............................................26150.0711000000
....................................CACGAAATCCGCACACACGGTG...........................................................................................................................22150.0711000000
.........................................................................................................GTAGTTGGTTCGGCTTATACTTCA....................................................24150.0711000000
........................................................................................................TGTAGTTGGTTCGGCTTATACTTCA....................................................25150.0711000000
........................................................................................................................TATACTTCATGCAGCTTTCGCAGCTCCG.................................28150.0711000000
................................................................................................................GTTCGGCTTATACTTCATGCAGCT.............................................24150.0711000000
...........................................TCCGCACACACGGTGGCCCAT.....................................................................................................................21160.0611000000
..............................................................................................................TGGTTCGGCTTATACTTCATGCA................................................23160.0611000000
...............................................CACACACGGTGGCCCATGGCTCC...............................................................................................................23160.0611000000
..............................................................................................................TGGTTCGGCTTATACTTCATGC.................................................22160.0611000000
.......................................................................................................................TTATACTTCATGCAGCTTTCAGC.......................................23170.0611000000
...........................................TCCGCACACACGGTGGCCCA......................................................................................................................20170.0611000000
.......................................................................................................................TTATACTTCATGCAGCTTTCGCAGCTT...................................27170.0611000000
..........................................ATCCGCACACACGGTGGC.........................................................................................................................18170.0611000000
...............................................CACACACGGTGGCCCATGGC..................................................................................................................20180.0611000000
.......................................................GTGGCCCATGGCTCCTCCGGCAC.......................................................................................................23180.0611000000
........................................................TGGCCCATGGCTCCTCCGGCAC.......................................................................................................22200.0511000000

Generated: 05/15/2015 at 03:03 PM