ID:

dps_1965

 Coordinate:

Unknown_group_315:14545-14695 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.6 -23.5 -23.5

Flybase annnotation

CDS [Dpse\GA28711-cds]; exon [dpse_GLEANR_8824:3]; intron [Dpse\GA28711-in]

Repeatable elements

NameClassFamilyStrand
Gypsy16-I_Dpse-intLTRGypsy+
mature
  1. dps_1965  Unknown_group_315:14649-14670 +
  2. Unknown_singleton_1491:5258-5279 -
  3. Unknown_singleton_1491:9934-9955 -
  4. Unknown_singleton_1491:17390-17411 -
  5. Unknown_singleton_1491:23996-24017 +
  6. Unknown_singleton_1491:27098-27119 +
  7. Unknown_singleton_1456:14729-14750 +
  8. XL_group1a:3597687-3597708 -
  9. Unknown_singleton_1334:2273-2294 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTTTTGAAGCGCATTATATTGATTTGTGTCAGGAAAACTGTGTAGCCAAAAACCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCGCCTTTGAACCTAGCTTCCTATTAATATGAGGTCAGAAAAAAACCACCTATTGGCCAATGTCGGAGTTAGAGCCTAAATAGGCTCTGGCCCTAACTCACTGGCGAAGACCAAACACTACAAGTGCCGACTTCCGGCGGTTGCCGCCTCCCTTCATGT
***************************************************.......(((((((((((((...(((((...(((....)))..))..)))...))))))).............((((((..............))))))...)))))).......(((....)))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M059
embryo
 GSM343916
embryo
..........................TGTGTCAGGAAAACTGTGTAGC........................................................................................................................................................................................................... 22 0 9 5.11 46 11 28 6 1 0 0
................................AGGAAAACTGTGTAGCCAAAAACC................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0
.....................TGATTTGTGTCAGGAAAACTGTG............................................................................................................................................................................................................... 23 0 11 2.00 22 18 3 0 1 0 0
..........................................................................................................................................................TCGGAGTTAGAGCCTAAATAGG........................................................................... 22 0 9 1.56 14 6 7 1 0 0 0
.......................ATTTGTGTCAGGAAAACTGTGTAGC........................................................................................................................................................................................................... 25 0 9 1.11 10 7 2 1 0 0 0
.......................ATTTGTGTCAGGAAAACTGTGTAGCCA......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0
...................................................AAACCAATCCGACGAGCTGGACCCG............................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0
..........................................TGTAGCCAAAAACCAATCCGACGAGC....................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................................................TAGGCTCTGGCCCTAACTCACTGGC...................................................... 25 0 8 0.88 7 2 0 5 0 0 0
....................................................................TGGACCCGAGCACAGCAAGAATGCGC............................................................................................................................................................. 26 0 14 0.71 10 0 6 4 0 0 0
.....................................................ACCAATCCGACGAGCTGGACCC................................................................................................................................................................................ 22 0 13 0.69 9 9 0 0 0 0 0
.....................TGATTTGTGTCAGGAAAACTGTGT.............................................................................................................................................................................................................. 24 0 11 0.64 7 6 0 0 0 1 0
............................................................................................................................................................................TAGGCTCTGGCCCTAACTCACTGG....................................................... 24 0 8 0.63 5 4 1 0 0 0 0
.....................................................ACCAATCCGACGAGCTGGACCCGA.............................................................................................................................................................................. 24 0 13 0.62 8 8 0 0 0 0 0
........................TTTGTGTCAGGAAAACTGTGTAGC........................................................................................................................................................................................................... 24 0 9 0.56 5 3 1 0 1 0 0
.....................TGATTTGTGTCAGGAAAACTGTGTAGC........................................................................................................................................................................................................... 27 0 9 0.56 5 1 0 4 0 0 0
.....................................................ACCAATCCGACGAGCTGGACCCGAGC............................................................................................................................................................................ 26 0 13 0.54 7 7 0 0 0 0 0
.............................................................................................................................................CTATTGGCCAATGTCGGAGTTAGAGCC................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................TTGGCCAATGTCGGAGTTAGAGCC................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................................TATTGGCCAATGTCGGAGTTAGAGC.................................................................................... 25 0 4 0.50 2 0 2 0 0 0 0
.................................................................................................................................................................................................................CTAAAAGTGCCGATTTCCAGC..................... 21 3 2 0.50 1 0 0 0 0 1 0
.....................................................................................................................................................CAATGTCGGAGTTAGAGCCTAAA............................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
.......................ATTTGTGTCAGGAAAACTGTGTAG............................................................................................................................................................................................................ 24 0 10 0.50 5 4 0 0 1 0 0
.....................................................ACCAATCCGACGAGCTGGACC................................................................................................................................................................................. 21 0 13 0.46 6 6 0 0 0 0 0
..........................TGTGTCAGGAAAACTGTGTAG............................................................................................................................................................................................................ 21 0 10 0.40 4 1 3 0 0 0 0
..........................................................TCCGACGAGCTGGACCCGAGCAC.......................................................................................................................................................................... 23 0 13 0.38 5 5 0 0 0 0 0
.....................................................ACCAATCCGACGAGCTGGAC.................................................................................................................................................................................. 20 0 13 0.38 5 4 0 0 0 1 0
.....................TGATTTGTGTCAGGAAAACTGT................................................................................................................................................................................................................ 22 0 11 0.36 4 4 0 0 0 0 0
.....................TGATTTGTGTCAGGAAAACTGTGTAG............................................................................................................................................................................................................ 26 0 10 0.30 3 1 1 1 0 0 0
................TATATTGATTTGTGTCAGGAAAACT.................................................................................................................................................................................................................. 25 0 11 0.27 3 0 3 0 0 0 0
..................TATTGATTTGTGTCAGGAAAACTGTG............................................................................................................................................................................................................... 26 0 11 0.27 3 0 3 0 0 0 0
.....................TGATTTGTGTCAGGAAAACTGTGTA............................................................................................................................................................................................................. 25 0 11 0.27 3 3 0 0 0 0 0
.................................................................................................................................................TGGCCAATGTCGGAGTTAGAGC.................................................................................... 22 0 4 0.25 1 0 0 0 1 0 0
.................................................................................................................................................TGGCCAATGTCGGAGTTAGAA..................................................................................... 21 1 4 0.25 1 0 1 0 0 0 0
........................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCAC.......................................................... 25 0 8 0.25 2 1 0 1 0 0 0
.................................................................................................................................................TGGCCAATGTCGGAGTTAG....................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0
........................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCA........................................................... 24 0 8 0.25 2 0 0 2 0 0 0
..........................................................TCCGACGAGCTGGACCCGAGCACAG........................................................................................................................................................................ 25 0 13 0.23 3 3 0 0 0 0 0
.....................................................ACCAATCCGACGAGCTGGACCCG............................................................................................................................................................................... 23 0 13 0.23 3 3 0 0 0 0 0
.......................ATTTGTGTCAGGAAAACTGTGTA............................................................................................................................................................................................................. 23 0 11 0.18 2 2 0 0 0 0 0
................TATATTGATTTGTGTCAGGAAAACTG................................................................................................................................................................................................................. 26 0 11 0.18 2 0 2 0 0 0 0
.....................TGATTTGTGTCAGGAAAACTGTT............................................................................................................................................................................................................... 23 1 11 0.18 2 0 0 0 2 0 0
......................GATTTGTGTCAGGAAAACTGTG............................................................................................................................................................................................................... 22 0 11 0.18 2 2 0 0 0 0 0
....................................................................TGGACCCGAGCACAGCAAGAATGCGCGC........................................................................................................................................................... 28 0 14 0.14 2 0 1 1 0 0 0
........................................................................CCCGAGCACAGCAAGAATGCGCG............................................................................................................................................................ 23 0 14 0.14 2 2 0 0 0 0 0
............................................................................................................................................................................TAGGCTCTGGCCCTAACCCACTGGC...................................................... 25 1 8 0.13 1 1 0 0 0 0 0
............................................................................................................................................................................TAGGCTCTGGCCCTAACCCACTGG....................................................... 24 1 8 0.13 1 1 0 0 0 0 0
............................................................................................................................................................................TAGGCTCTGGACCTAACTCACTGGC...................................................... 25 1 8 0.13 1 0 0 1 0 0 0
..................................................................................................................................................................................CTGGCCCTAACTCACTGG....................................................... 18 0 8 0.13 1 1 0 0 0 0 0
........................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCACC......................................................... 26 1 8 0.13 1 1 0 0 0 0 0
.......................................................................................................................................................................CTAAATAGGCTCTGGCCCTAACTCACT......................................................... 27 0 8 0.13 1 1 0 0 0 0 0
..........................................................................................................................................................TCGGAGTTAGAGCCTAAATAGGCTC........................................................................ 25 0 9 0.11 1 1 0 0 0 0 0
.........................................................................................................................................................GTCGGAGTTAGAGCCTAAATAGGC.......................................................................... 24 0 9 0.11 1 1 0 0 0 0 0
.TTTTTTGAAGCGCATTATATTGATT................................................................................................................................................................................................................................. 25 0 9 0.11 1 0 1 0 0 0 0
.........................................................................................................................................................GTCGGAGTTAGAGCCTAAATAGGA.......................................................................... 24 1 9 0.11 1 0 1 0 0 0 0
............................................................................................................................................................................TAGGCTCTGGCCCTAACCCACTG........................................................ 23 1 9 0.11 1 1 0 0 0 0 0
...........................GTGTCAGGAAAACTGTGTAGC........................................................................................................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................CGGAGTTAGAGCCTAAATAGGCTC........................................................................ 24 0 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................CGGAGTTAGAGCCTAAATAGG........................................................................... 21 0 9 0.11 1 1 0 0 0 0 0
............................................................................................................................................................................TAGGCTCTGGCCCTAACTCACTGAC...................................................... 25 1 9 0.11 1 1 0 0 0 0 0
.........................................................................................................................................................GTCGGAGTTAGAGCCTAAATAGG........................................................................... 23 0 9 0.11 1 1 0 0 0 0 0
....TTTGAAGCGCATTATATTGATTTGT.............................................................................................................................................................................................................................. 25 0 9 0.11 1 1 0 0 0 0 0
................................................................................................................................................................TTAGAGCCTAAATAGGCTCTGGCCC.................................................................. 25 0 10 0.10 1 1 0 0 0 0 0
.....................TGATTTGTGTCAGGAAAACTGTGTAGG........................................................................................................................................................................................................... 27 1 10 0.10 1 0 1 0 0 0 0
........................TTTGTGTCAGGAAAACTGTGTAG............................................................................................................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0
......................GATTTGTGTCAGGAAAACTGTGTAG............................................................................................................................................................................................................ 25 0 10 0.10 1 1 0 0 0 0 0
......................GATTTGTGTCAGGAAAACTGTGT.............................................................................................................................................................................................................. 23 0 11 0.09 1 1 0 0 0 0 0
......................GATTTGTGTCAGGAAAACTG................................................................................................................................................................................................................. 20 0 11 0.09 1 1 0 0 0 0 0
.....................TGATTTGTGTCAGGAAAACTG................................................................................................................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0 0
.......................ATTTGTGTCAGGAAAACTGTG............................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
.....................TGATTTGTGTCAGGGAAACTGT................................................................................................................................................................................................................ 22 1 11 0.09 1 0 0 1 0 0 0
......................................................................................................................................................................CCTAAATAGGCTCTGGCCC.................................................................. 19 0 12 0.08 1 1 0 0 0 0 0
........................................................AATCCGACGAGCTGGACCCGAGCA........................................................................................................................................................................... 24 0 13 0.08 1 0 0 0 1 0 0
...........................................................CCGACGAGCTGGACCCGAGCA........................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0
..........................................................TCCGACGAGCTGGACCCGAGC............................................................................................................................................................................ 21 0 13 0.08 1 1 0 0 0 0 0
.....................................................ACCAATCCGGCGAGCTGGACCCG............................................................................................................................................................................... 23 1 13 0.08 1 1 0 0 0 0 0
..........................................................TCCGACGAGCTGGACCCGAGCACAGCAA..................................................................................................................................................................... 28 0 13 0.08 1 1 0 0 0 0 0
......................................................CCAATCCGACGAGCTGGACC................................................................................................................................................................................. 20 0 13 0.08 1 1 0 0 0 0 0
.....................................................ACCAATCCGACGAGCTGGA................................................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0
..........................................................TCCGACGCGCTGGACCCGAGCACAGCAAA.................................................................................................................................................................... 29 2 13 0.08 1 0 0 0 0 1 0
...........................................................CCGACGAGCTGGACCCGAG............................................................................................................................................................................. 19 0 13 0.08 1 1 0 0 0 0 0
......................................................CCAATCCGACGAGCTGGACCCGAGC............................................................................................................................................................................ 25 0 13 0.08 1 0 0 1 0 0 0
............................................................CGACGAGCTGGACCCGAGCACAG........................................................................................................................................................................ 23 0 13 0.08 1 1 0 0 0 0 0
.......................................................CAATCCGACGAGCTGGACCCG............................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0
...........................................................CCGACGAGCTGGACCCGAGCACAGCAA..................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0
..........................................................TCCGACGAGCTGGACCCGAGA............................................................................................................................................................................ 21 1 13 0.08 1 0 0 0 0 0 1
...........................................................CCGACGAGCTGGACCCGAGCACAG........................................................................................................................................................................ 24 0 13 0.08 1 1 0 0 0 0 0
....................................................................TGGACCCGAGCACAGCAAGAATG................................................................................................................................................................ 23 0 14 0.07 1 0 1 0 0 0 0
..............................................................................CACAGCAAGAATGCGCGA........................................................................................................................................................... 18 1 14 0.07 1 1 0 0 0 0 0
...................................................................CTGGACCCGAGCACAGCAAGAATGCG.............................................................................................................................................................. 26 0 14 0.07 1 0 0 1 0 0 0
....................................................................TGGACCCGAGCACAGCAAGAATGC............................................................................................................................................................... 24 0 14 0.07 1 0 0 1 0 0 0
....................................................................TGGACCCGAGCACAGCAAGAATGCG.............................................................................................................................................................. 25 0 14 0.07 1 0 1 0 0 0 0
...................................................AAAACAATCCGACGATC....................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

AAAAAAACTTCGCGTAATATAACTAAACACAGTCCTTTTGACACATCGGTTTTTGGTTAGGCTGCTCGACCTGGGCTCGTGTCGTTCTTACGCGCGGAAACTTGGATCGAAGGATAATTATACTCCAGTCTTTTTTTGGTGGATAACCGGTTACAGCCTCAATCTCGGATTTATCCGAGACCGGGATTGAGTGACCGCTTCTGGTTTGTGATGTTCACGGCTGAAGGCCGCCAACGGCGGAGGGAAGTACA
***************************************************************************.......(((((((((((((...(((((...(((....)))..))..)))...))))))).............((((((..............))))))...)))))).......(((....)))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M059
embryo
 GSM343916
embryo
 M062
head
.............................................................................................GCGGAAACTTGGATCGAAGGATAAT..................................................................................................................................... 25 0 2 9.50 19 15 3 1 0 0 0 0
........TTCGCGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 28 0 11 6.73 74 64 3 0 3 3 0 1
...............................................................................................GGAAACTTGGATCGAAGGATAAT..................................................................................................................................... 23 0 2 6.00 12 12 0 0 0 0 0 0
............................................................................................CGCGGAAACTTGGATCGAAGGAT........................................................................................................................................ 23 0 2 6.00 12 10 0 0 0 2 0 0
............................................................................................CGCGGAAACTTGGATCGAAGGATAAT..................................................................................................................................... 26 0 2 6.00 12 3 6 1 2 0 0 0
..............................................................................................CGGAAACTTGGATCGAAGGATAAT..................................................................................................................................... 24 0 2 5.50 11 9 0 0 2 0 0 0
..........CGCGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 26 0 11 4.45 49 38 8 3 0 0 0 0
.........TCGCGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 27 0 11 3.73 41 33 2 2 2 2 0 0
..........................................................................................CGCGCGGAAACTTGGATCGAAGGAT........................................................................................................................................ 25 0 2 3.00 6 6 0 0 0 0 0 0
.............................................................................................GCGGAAACTTGGATCGAAGGAT........................................................................................................................................ 22 0 2 2.00 4 4 0 0 0 0 0 0
.........................................................................................ACGCGCGGAAACTTGGATCGAAGGAT........................................................................................................................................ 26 0 2 2.00 4 4 0 0 0 0 0 0
...............................................................................................GGAAACTTGGATCGAAGGAT........................................................................................................................................ 20 0 2 1.50 3 2 0 0 1 0 0 0
..............................................................................................CGGAAACTTGGATCGAAGGAT........................................................................................................................................ 21 0 2 1.50 3 3 0 0 0 0 0 0
.......................................GACACATCGGTTTTTGGTTAGGCTGCT......................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................CGGAAACTTGGATCGAAGGATAA...................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0
....................................TTTGACACATCGGTTTTTGGT.................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
......................................TGACACATCGGTTTTTGGTTAGGCT............................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................GGAAACTTGGATCGAAGGATAA...................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0
........................................................................................................................................TGGTGGATAACCGGTTACAGCCT............................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GATGTTCACGGCTGAAGGCC...................... 20 0 1 1.00 1 0 0 1 0 0 0 0
...........GCGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 25 0 11 0.91 10 9 1 0 0 0 0 0
......ACTTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 25 0 9 0.89 8 8 0 0 0 0 0 0
...................................................................GACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 21 0 14 0.86 12 8 2 0 2 0 0 0
........TTCGCGTAATATAACTAAACACAGTCC........................................................................................................................................................................................................................ 27 0 11 0.82 9 9 0 0 0 0 0 0
.....AACTTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 26 0 9 0.67 6 5 0 0 0 0 1 0
...........................................................GGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 23 0 13 0.62 8 5 2 1 0 0 0 0
.......CTTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 24 0 9 0.56 5 5 0 0 0 0 0 0
............................................................................................CGCGGAAACTTGGATCGAA............................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................CGCGCGGAAACTTGGATCGAAGGATAA...................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................GAAACTTGGATCGAAGGATAAT..................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................ACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 20 0 14 0.50 7 7 0 0 0 0 0 0
............................................................................................CGCGGAAACTTGGATCGGAGGATAAT..................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................CGCGCGGAAACTTGGATCGAAGGA......................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................CGCGCGGAAACTTGGATCGAAGGATAAT..................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................TACGCGCGGAAACTTGGATCGAAGGAT........................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................CGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 22 0 14 0.50 7 7 0 0 0 0 0 0
...............................................................................................GGAAACTTGGATCGAAGGA......................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................GCGCGGAAACTTGGATCGAAGGATAAT..................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................GGAAACTTGGATCGAAGAATAAT..................................................................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
...........................................................................................GCGCGGAAACTTGGATCGAAGGAT........................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................................................................ATAACCGGTTACAGCCTCAATCTCGGAT................................................................................. 28 0 2 0.50 1 0 0 1 0 0 0 0
........TTCGCGTAATATAACTAAACACAGT.......................................................................................................................................................................................................................... 25 0 11 0.45 5 5 0 0 0 0 0 0
.........TCGCGTAATATAACTAAACACAGT.......................................................................................................................................................................................................................... 24 0 11 0.45 5 5 0 0 0 0 0 0
.........TCGCGTAATATAACTAAACACAGTC......................................................................................................................................................................................................................... 25 0 11 0.36 4 4 0 0 0 0 0 0
..............................................................TGCTCGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 26 0 14 0.36 5 3 0 2 0 0 0 0
.......................................................................................................................................................................................................................................CAACGGCGGCGGGAAATAC. 19 2 3 0.33 1 0 0 0 0 1 0 0
.....AACTTCGCGTAATATAACTAAACACAGT.......................................................................................................................................................................................................................... 28 0 9 0.33 3 1 0 2 0 0 0 0
.....................................................GAGTTAGGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 29 2 13 0.31 4 0 4 0 0 0 0 0
.........................................................TAGGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 25 0 13 0.31 4 3 0 0 1 0 0 0
..........................................................AGGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 24 0 13 0.31 4 2 0 0 2 0 0 0
................................................................CTCGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 24 0 14 0.29 4 3 0 1 0 0 0 0
........TTCGCGTAATATAACTAAACACAG........................................................................................................................................................................................................................... 24 0 11 0.27 3 3 0 0 0 0 0 0
........TTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 23 0 11 0.27 3 3 0 0 0 0 0 0
.........TCGCGTAATATAACTAAACACAGTCC........................................................................................................................................................................................................................ 26 0 11 0.27 3 3 0 0 0 0 0 0
............................................................................................................................................................................ATCCGAGACCGGGATTGAGTGACCGCTT................................................... 28 0 4 0.25 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAGACCGGGATTGAGTGACCGC..................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0
................................................................................................................................................................................AAGACCGGGATTGAGTGACCGCTT................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0
..........................................................................................................................GTCCAGTGTTTTTTTGGTGTAT........................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 1 0
............................................................................................................................................................................ATCCGAGACCGGGATTGAGTGACCGCT.................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0
...........................................................GGCTGCTCGACCTGGGCTCGTGTCGT...................................................................................................................................................................... 26 0 13 0.23 3 2 0 1 0 0 0 0
...........................................................GGCTGCTCGACCTGGGCTCGTG.......................................................................................................................................................................... 22 0 13 0.23 3 3 0 0 0 0 0 0
.............................................................CTGCTCGACCTGGGCTCGTGTCGT...................................................................................................................................................................... 24 0 14 0.21 3 3 0 0 0 0 0 0
...............................................................GCTCGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 25 0 14 0.21 3 3 0 0 0 0 0 0
........TTCGCGTAATATAACTAAACACAGTC......................................................................................................................................................................................................................... 26 0 11 0.18 2 2 0 0 0 0 0 0
........ATCGCGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 28 1 11 0.18 2 2 0 0 0 0 0 0
..........CGCGTAATATAACTAAACACAGTCC........................................................................................................................................................................................................................ 25 0 11 0.18 2 2 0 0 0 0 0 0
.........TCGCGTAATATAACTAAACACAGTCCTT...................................................................................................................................................................................................................... 28 0 11 0.18 2 2 0 0 0 0 0 0
..................ATAACTAAACACAGTCCTTTTGACA................................................................................................................................................................................................................ 25 0 11 0.18 2 1 0 1 0 0 0 0
....................AACTAAACACAGTCCTTTTGACACAT............................................................................................................................................................................................................. 26 0 11 0.18 2 0 0 2 0 0 0 0
......................................................GGTTAGGCTGCTCGACCTGGGCTCGT........................................................................................................................................................................... 26 0 13 0.15 2 1 1 0 0 0 0 0
.........................................................TAGGCTGCTCGACCTGGGCTCGTGTCGT...................................................................................................................................................................... 28 0 13 0.15 2 2 0 0 0 0 0 0
....................................................................................................................................................................................................................GTTCACGGCTGAAGGCCGCCAACG............... 24 0 7 0.14 1 1 0 0 0 0 0 0
..................................................................CGACCTGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 23 0 14 0.14 2 2 0 0 0 0 0 0
.............................................................CTGCTCGACCTGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 28 0 14 0.14 2 0 0 2 0 0 0 0
.................................................................ATGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 23 2 14 0.14 2 1 0 0 0 0 1 0
....................................................................ACCTGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 21 0 14 0.14 2 2 0 0 0 0 0 0
...............................................................GCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 19 0 14 0.14 2 2 0 0 0 0 0 0
...................................................................GACCTGGGCTCGTGTCGTT..................................................................................................................................................................... 19 0 14 0.14 2 2 0 0 0 0 0 0
.............................................................CTGCTCGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 27 0 14 0.14 2 2 0 0 0 0 0 0
..............................................................TGCTCGACCTGGGCTCGTGTCGT...................................................................................................................................................................... 23 0 14 0.14 2 2 0 0 0 0 0 0
.............................................................CTGCTCGACCTGGGCTCGTGTCG....................................................................................................................................................................... 23 0 14 0.14 2 2 0 0 0 0 0 0
....................................................................................................................................................................AAGGATTTATCCGAGACCGGGATTGAGT........................................................... 28 2 8 0.13 1 0 0 0 1 0 0 0
.............................................................................................................................................................................TCCGAGACCGGGATTGAGTGACCG...................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0
..........................................................................................................................................................................TTATCCGAGACCGGGATTGAGTGAC........................................................ 25 0 8 0.13 1 0 0 0 1 0 0 0
..........................................................................................................................................................................TTATCCGAGACCGGGATTGAGT........................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAGACCGGGATTGAGTGACCG...................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0
......ACTTCGCGTAATATAACT................................................................................................................................................................................................................................... 18 0 9 0.11 1 1 0 0 0 0 0 0
......ACTTCGCGTAATATAACTAAACACAG........................................................................................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0
.....AACTTCGCGTAATATAACTAAACACATT.......................................................................................................................................................................................................................... 28 1 9 0.11 1 1 0 0 0 0 0 0
......................................................................................................................................................................GGATTTATCCGAGACCGGGAT................................................................ 21 0 9 0.11 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAGACCGGGATTGAGTGAC........................................................ 20 0 9 0.11 1 0 0 1 0 0 0 0
.....................................................................................................................................................................CGGATTTATCCGAGACCGGGAT................................................................ 22 0 9 0.11 1 1 0 0 0 0 0 0
...GAAACTTCGCGTAATGTAACTAAACACA............................................................................................................................................................................................................................ 28 2 9 0.11 1 1 0 0 0 0 0 0
....AAACTTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 27 0 9 0.11 1 1 0 0 0 0 0 0
.....AACTTCGCGTAATATAACTAATCAC............................................................................................................................................................................................................................. 25 1 9 0.11 1 1 0 0 0 0 0 0
......ACTTCGCGTAATATAACTAAACACAGTC......................................................................................................................................................................................................................... 28 0 9 0.11 1 1 0 0 0 0 0 0
.......CTTCGCGTAATATAACTAAACACAGTCC........................................................................................................................................................................................................................ 28 0 9 0.11 1 1 0 0 0 0 0 0
..AAAAACTTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 29 0 9 0.11 1 1 0 0 0 0 0 0
......GCTTCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 25 1 9 0.11 1 1 0 0 0 0 0 0
......ACGTCGCGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 30 1 9 0.11 1 0 1 0 0 0 0 0
..................ATAACTAAACACAGTCCTTTTGAC................................................................................................................................................................................................................. 24 0 11 0.09 1 1 0 0 0 0 0 0
.........TCGCGTAATATAACTAAAC............................................................................................................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0
........TTCGCGTAATATAACTAAACACAGTCCTC...................................................................................................................................................................................................................... 29 1 11 0.09 1 1 0 0 0 0 0 0
........TTCGCGTAATATAACTAAAC............................................................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0 0
..........CGAGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 26 1 11 0.09 1 0 1 0 0 0 0 0
............CGTAATATAACTAAACACA............................................................................................................................................................................................................................ 19 0 11 0.09 1 0 0 0 0 1 0 0
............CGTAATATAACTAAACACAGTCCTT...................................................................................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0 0
...........GCGTAATATAACTAAACACAGT.......................................................................................................................................................................................................................... 22 0 11 0.09 1 1 0 0 0 0 0 0
..........CGCGTAATATAACTAAACACAGTCCTT...................................................................................................................................................................................................................... 27 0 11 0.09 1 1 0 0 0 0 0 0
.........TCGCGTAATATAACTAAACACA............................................................................................................................................................................................................................ 22 0 11 0.09 1 1 0 0 0 0 0 0
............CGTAATATAACTAAACACAGTCCT....................................................................................................................................................................................................................... 24 0 11 0.09 1 0 1 0 0 0 0 0
............CGTAATATAACTAAACACAGT.......................................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0
...........GCGTAATATAACTAAACACAGTCC........................................................................................................................................................................................................................ 24 0 11 0.09 1 1 0 0 0 0 0 0
........TTCGCGTAATATAACTTAACACAGTCCT....................................................................................................................................................................................................................... 28 1 11 0.09 1 1 0 0 0 0 0 0
.........................................................TGGGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 25 1 13 0.08 1 1 0 0 0 0 0 0
.........................................................TAGGCTGCTCGACCTGGGCTCGTG.......................................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0 0
............................................................GCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0
............................................................AATGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 22 2 13 0.08 1 1 0 0 0 0 0 0
...........................................................GGCTGCTCGACCTGGGCTCGTGTCG....................................................................................................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0 0
............................................................GCTGCTCGACCTGGGCTCGTGTCGT...................................................................................................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0 0
......................................................GGTTAGGCTGCTCGACCTGGGTTCGT........................................................................................................................................................................... 26 1 13 0.08 1 0 1 0 0 0 0 0
.........................................................TAGGCTGCTCGACCTGGGCTCGT........................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0 0
...........................................................GGCTGCTCGACCTGGGCTCGTGTCGTT..................................................................................................................................................................... 27 0 13 0.08 1 0 1 0 0 0 0 0
......................................................GGTTAGGCTGCTCGACCTGGGCT.............................................................................................................................................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0
..........................................................AGGCTGCTCGACCTGGGCTCGT........................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0
...........................................................TGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 23 1 13 0.08 1 1 0 0 0 0 0 0
.....................................................TGGTTAGGCTGCTCGACCTGGGCT.............................................................................................................................................................................. 24 0 13 0.08 1 1 0 0 0 0 0 0
.....................................................TGGTTAGGCTGCTCGACCTGGGCTCGT........................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0
..........................................................TTGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 24 2 13 0.08 1 1 0 0 0 0 0 0
..........................................................TGGCTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 24 1 13 0.08 1 0 1 0 0 0 0 0
.....................................................................CCTGGGCTCGTGTCGTTC.................................................................................................................................................................... 18 0 14 0.07 1 1 0 0 0 0 0 0
.....................................................................CCTGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 20 0 14 0.07 1 0 1 0 0 0 0 0
......................................................................CTGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 19 0 14 0.07 1 1 0 0 0 0 0 0
..................................................................CGACCTGGTCTCGTGTCGTTCT................................................................................................................................................................... 22 1 14 0.07 1 0 0 1 0 0 0 0
.....................................................................CCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0 0
..................................................................TGACCTGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 23 1 14 0.07 1 1 0 0 0 0 0 0
...................................................................GACCTGGGCTCATGTCGTTCT................................................................................................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0 0
........................................................................GGGCTCGTGTCGTTCTTACG............................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0 0 0
................................................................ATCGACCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 24 1 14 0.07 1 1 0 0 0 0 0 0
....................................................................TCCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 20 1 14 0.07 1 1 0 0 0 0 0 0
..................................................................CGACCTGGGCTCGTGTCGTTCTTACG............................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0 0
................................................................CTCGACCTGGGCTCGTGTCGTT..................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0
.............................................................CTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0
..............................................................TGCTCGACCTGGTCTCGTGTCGTTCTT.................................................................................................................................................................. 27 1 14 0.07 1 0 0 1 0 0 0 0
....................................................................ACCTGGGCTCGTGTCGTTC.................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0 0
......................................................................ATGGGCTCGTGTCGTTCTT.................................................................................................................................................................. 19 1 14 0.07 1 0 0 0 0 0 1 0
.............................................................TTGCTCGACCTGGGCTCGTGT......................................................................................................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0 0
..................................................................CGACCTGGGCTCGTGTCG....................................................................................................................................................................... 18 0 14 0.07 1 1 0 0 0 0 0 0
....................................................................TTCTGGGCTCGTGTCGTTCT................................................................................................................................................................... 20 2 16 0.06 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGGCTGAAGTCCGACAAAG............... 19 3 20 0.05 1 1 0 0 0 0 0 0
.......................................................................TTGGCTCATGTCGTTCTTAT................................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_315:14495-14745 + dps_1965 TTTTTTTG--------------------------AAGCGCATTAT---AT---TGATTTGTGTCAGG---AAAA--CTGTGT-A---GCCA--------AAA------ACCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCGCCTTTGAACCTAGCTTCCTATTAATATGAGGTCAGAAAAAAACCACCTATTGGCCAATGTCGGAGTTAGAGCC-TAAATAGGCTCTGGCCCTAACTCACTGGCGAAGACCAAACACTACAAGTGCCGACTTCCGGCGGTTGCCGCCTCCCTTCATGT
droPer2 scaffold_113:75999-76242 + TTTTTTTG--------------------------AAGCGCATTAT---AT---TGATTTGTGTCAGG---AAAA--CTGTGT-A---GCTAGGGGAGAAAGAACCCCGACCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCGCCTTTGAACCTAGCTTCCTATTAACATGAGGTCAGAAAAAAACCATCTATTGGCCAATATCGGAGTTAGAGCC-TAAATAGGCTCTGGCCCTAACTCACTGGCGAAGACTGAACACTACAAGTG-TAGTT--C------------------GGCAGT
droWil2 scf2_1100000004521:3380089-3380204 + TTTTCTTA--------------------------ACGCGCATTAA---AT---TTATTAATGATAGT---GAG------TGT-G---AAAAGGGGAGAAAGAACCCCGACCAATCCGACGAGCTAGACCCGAGCATAGCAAGAATGCGCACCCTCGAACCT--------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13324:1750369-1750501 - TCTCTCTGT-------------------------CCGCGCATTAA---TAATATTACGTATGTCAGAG---TAC--ACGTTC-A---ATTTGGTTA-GAAGGACCCCGACCGATCCGACGAGCTAGACTGGAGCATAGCTAGAATGCGCATCT-CGAACCCAATTGCACATT---------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6341:108767-108884 + CTGAA-------------------------------GCGCACTAT-AAC----TAAAGTGTGTTAGGG---TACAATAGTGTAG---AATAGGTGGAGAAGAACCCCGAC-AATCCGGCGAGCTAGATACGAGCATAGCAAGAGTGCGCACCTCGAAGCCT--------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:24436579-24436682 - TTTTGTTA--------------------------CCGCGCACTAT---ATAAATGAATTGTGTTA----------------------CTTGGGAGAGGAAGAACCCCAAC-AATCCGACGAGCTAGAACCGCGCATAGCGAGAGTACTC------AAACCTA-------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_5063:4769-4840 + GTTCCAACTCGTAC--------------------AAGGGCATCAA-----------------GTACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGACTTCCGCCCTGT
droBip1 scf7180000395269:13520-13560 + CTACAGGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGTTACCTCCG-GTGCCGGTTACCTCCGGTG
droKik1 scf7180000301464:5292-5458 + TTATCT-----------------------------CGCGCATTAT---A----TGCATTGTGTT-GT---AAAC--A----A-A---GCTATGGGAGAAAAAACCCCGCCCCATCCGACGAGCTGGACCCGAGCACAGCGAGAATGCGCACCCTCGAACCTAGCGTCTTA-----------------AAGAACCACCTTTACGGAACGATCATAGTT-------------------------------------------------------------------------GGTAGGCCCTTATAGGC
droFic1 scf7180000453442:2333-2445 + CTTTTGATT----------------ATTACGCAC-----------T-AG----TAAAGTGTGGTAGCG---TGCAACCGTAC-CCTC-TCAAGCAAGGAAGAACCCCGAC--ATCCGGCGAGCTAGAACCGAGCCTAGCAAGAGTGCGTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491076:7419-7527 - A------------------------------------------------------------------------------------------------------------CCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCACCATCAACCCTAGCTTCTTA-----------------AATTAACATCTATATGCAGCTGTGGTATTTAGAGACTTTTATAGGCT-------------------------------------------------------------------------
droRho1 scf7180000772795:3430-3543 - CTTTTGATT----------------ATTACGCAC-----------TAAA----TAAATTGTGGTAGCG---CGCAACCGTAC-CATC-TCAAGCAAGGAAGAACCCCGAC--ATCCGGCAAGCTAGACCCGAGCCTAGCAAGAGTGCGTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302433:63887-64040 - TTTAAAC-----------------------------------------CA---TGATTTGCGTTCGT---AAAC--TTAGGT-A---GCTAAAAGGGAAAGGACCCCGACCAATCCAACGATCTAGACCCGAGCACCGCTAGATTGCGCACCAGCGCACCCAGTTCCTT-CTAACAGTAAGTCATAACTAAA--ATAATGTGGCTA-------------------------------------------------------------------------------------------------ATGT
droTak1 scf7180000415270:5873-6119 - TTTTTTTGT-G-AT--------------------CAGCGCATTAAAC-AT---TGATTTGTGTTAGT---AAAC--TTAGGT-A---ACTGGGAGAGAAAGGACCCCGACCAATCCGACGAGCTGGACCCGAGCACCGCTAGAATGCGCACCGTCGATCCCAGTTCCTTTTTAATAGTGAGTCAGAACCAA--CATCATGTGGCCAATGTGATAGAAAGAGTC-T-TATAGACTTTGGCA-TCGCTTCTTGTCCTAAACTGAACACTACACAATCTGGCGC--------------------CCAACG
droEug1 scf7180000409146:622-673 + GACGG--------------------------------------------------------------------------------------------------------CCAATCAGTCCAACTACG-------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGTGTGGATGCCGGTTACCGCCATGC
dm3 chr3RHet:900287-900351 - CCATCCCAC----------------------------------------------------------------------------------------------------------------------------------------------CCGCGAACGCTGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTCCTCTGGCTGTCGGTTGCCTCCATGC
droSim2 2r:549701-549739 + CAGCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACCTCCATGC
droSec2 scaffold_2291:1068-1130 + TCACTAGCG-GAAAACTATCACTCT---------CCGCGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCATCCAGTTGCCGCTTGCCTCCTTGC
droYak3 v2_chr3h_random_002:147527-147691 + TTTTTGGTT-A-AT---------C----------TCGCGCATTAA---T----TGACTTGTGTTAAAAGGAAA------GAT-A---GCTAGGGGAGAAAGTACCCCGACCAATCCGACGAGCTGGACCCGAGCTCAGCAAGAATGCGCACCGTCGAACCTAGCTTCTTAT--------------AAAAGAAACATCTTTGGGCAACGGTCATAGTT------------------------------------------------------------------------------------------
droEre2 scaffold_4929:25626442-25626569 + GTTTATGAG---T------------AAGACGCAC-----------TTAT----TAAAATGTAGTAGCG---TTT---CGTAC-TATC-CTAAGC-TAAAAGAACCCCGACC--TACGGCGAGCTAGACCCGAGCATAGCAAGAGTGCGCATCCCTA------------------------------------------------------------------------------------------------------------------------------------------CTTTTATTAATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTTTTTTG--------------------------AAGCGCATTAT---AT---TGATTTGTGTCAGG---AAAA--CTGTGT-A---GCCA--------AAA------ACCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCGCCTTTGAACCTAGCTTCCTATTAATATGAGGTCAGAAAAAAACCACCTATTGGCCAATGTCGGAGTTAGAGCC-TAAATAGGCTCTGGCCCTAACTCACTGGCGAAGACCAAACACTACAAGTGCCGACTTCCGGCGGTTGCCGCCTCCCTTCATGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................TGTGTCAGG---AAAA--CTGTGT-A---GC..........................................................................................................................................................................................................................2295.1146011000012860
................................................................AGG---AAAA--CTGTGT-A---GCCA--------AAA------ACC....................................................................................................................................................................................................2412.0020000000020
.....................................................TGATTTGTGTCAGG---AAAA--CTGTG..................................................................................................................................................................................................................................23112.002201800001300
.................................................................................................................................................................................................................TCGGAGTTAGAGCC-TAAATAGG...........................................................................2291.56140600000710
.......................................................ATTTGTGTCAGG---AAAA--CTGTGT-A---GC..........................................................................................................................................................................................................................2591.11100700000210
.......................................................ATTTGTGTCAGG---AAAA--CTGTGT-A---GCCA--------................................................................................................................................................................................................................2711.0010000001000
....................................................................................................AA------ACCAATCCGACGAGCTGGACCCG................................................................................................................................................................................2511.0010000001000
...............................................................................TGT-A---GCCA--------AAA------ACCAATCCGACGAGC........................................................................................................................................................................................2611.0010000000010
....................................................................................................................................................................................................................................TAGGCTCTGGCCCTAACTCACTGGC......................................................2580.8870200000050
...........................................................................................................................TGGACCCGAGCACAGCAAGAATGCGC..............................................................................................................................................................26140.71100000000640
............................................................................................................ACCAATCCGACGAGCTGGACCC.................................................................................................................................................................................22130.6990900000000
.....................................................TGATTTGTGTCAGG---AAAA--CTGTGT-................................................................................................................................................................................................................................24110.6470610000000
....................................................................................................................................................................................................................................TAGGCTCTGGCCCTAACTCACTGG.......................................................2480.6350400000100
............................................................................................................ACCAATCCGACGAGCTGGACCCGA...............................................................................................................................................................................24130.6280800000000
........................................................TTTGTGTCAGG---AAAA--CTGTGT-A---GC..........................................................................................................................................................................................................................2490.5650300001100
.....................................................TGATTTGTGTCAGG---AAAA--CTGTGT-A---GC..........................................................................................................................................................................................................................2790.5650100000040
............................................................................................................ACCAATCCGACGAGCTGGACCCGAGC.............................................................................................................................................................................26130.5470700000000
....................................................................................................................................................................................................CTATTGGCCAATGTCGGAGTTAGAGCC-...................................................................................2720.5010100000000
.......................................................................................................................................................................................................TTGGCCAATGTCGGAGTTAGAGCC-...................................................................................2420.5010000000100
.....................................................................................................................................................................................................TATTGGCCAATGTCGGAGTTAGAGC.....................................................................................2540.5020000000200
............................................................................................................................................................................................................CAATGTCGGAGTTAGAGCC-TAAA...............................................................................2320.5010100000000
.......................................................ATTTGTGTCAGG---AAAA--CTGTGT-A---G...........................................................................................................................................................................................................................24100.5050400001000
............................................................................................................ACCAATCCGACGAGCTGGACC..................................................................................................................................................................................21130.4660600000000
..........................................................TGTGTCAGG---AAAA--CTGTGT-A---G...........................................................................................................................................................................................................................21100.4040100000300
.................................................................................................................TCCGACGAGCTGGACCCGAGCAC...........................................................................................................................................................................23130.3850500000000
............................................................................................................ACCAATCCGACGAGCTGGAC...................................................................................................................................................................................20130.3850410000000
.....................................................TGATTTGTGTCAGG---AAAA--CTGT...................................................................................................................................................................................................................................22110.3640400000000
.....................................................TGATTTGTGTCAGG---AAAA--CTGTGT-A---G...........................................................................................................................................................................................................................26100.3030100000110
..........................................TAT---AT---TGATTTGTGTCAGG---AAAA--CT.....................................................................................................................................................................................................................................25110.2730000000300
............................................T---AT---TGATTTGTGTCAGG---AAAA--CTGTG..................................................................................................................................................................................................................................26110.2730000000300
.....................................................TGATTTGTGTCAGG---AAAA--CTGTGT-A---............................................................................................................................................................................................................................25110.2730300000000
........................................................................................................................................................................................................TGGCCAATGTCGGAGTTAGAGC.....................................................................................2240.2510000001000
........................................................................................................................................................................................................TGGCCAATGTCGGAGTTAGAA......................................................................................2140.2510000000100
................................................................................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCAC..........................................................2580.2520100000010
........................................................................................................................................................................................................TGGCCAATGTCGGAGTTAG........................................................................................1940.2510100000000
................................................................................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCA...........................................................2480.2520000000020
.................................................................................................................TCCGACGAGCTGGACCCGAGCACAG.........................................................................................................................................................................25130.2330300000000
............................................................................................................ACCAATCCGACGAGCTGGACCCG................................................................................................................................................................................23130.2330300000000
.......................................................ATTTGTGTCAGG---AAAA--CTGTGT-A---............................................................................................................................................................................................................................23110.1820200000000
..........................................TAT---AT---TGATTTGTGTCAGG---AAAA--CTG....................................................................................................................................................................................................................................26110.1820000000200
.....................................................TGATTTGTGTCAGG---AAAA--CTGTT..................................................................................................................................................................................................................................23110.1820000002000
......................................................GATTTGTGTCAGG---AAAA--CTGTG..................................................................................................................................................................................................................................22110.1820200000000
...........................................................................................................................TGGACCCGAGCACAGCAAGAATGCGCGC............................................................................................................................................................28140.1420000000110
...............................................................................................................................CCCGAGCACAGCAAGAATGCGCG.............................................................................................................................................................23140.1420200000000
..........................................................................................................................................................................................................................................CTGGCCCTAACTCACTGG.......................................................1880.1310100000000
................................................................................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCACC.........................................................2680.1310100000000
..............................................................................................................................................................................................................................C-TAAATAGGCTCTGGCCCTAACTCACT.........................................................2780.1310100000000
.................................................................................................................................................................................................................TCGGAGTTAGAGCC-TAAATAGGCTC........................................................................2590.1110100000000
................................................................................................................................................................................................................GTCGGAGTTAGAGCC-TAAATAGGC..........................................................................2490.1110100000000
.TTTTTTG--------------------------AAGCGCATTAT---AT---TGATT.........................................................................................................................................................................................................................................................2590.1110000000100
................................................................................................................................................................................................................GTCGGAGTTAGAGCC-TAAATAGGA..........................................................................2490.1110000000100
...........................................................GTGTCAGG---AAAA--CTGTGT-A---GC..........................................................................................................................................................................................................................2190.1110100000000
..................................................................................................................................................................................................................CGGAGTTAGAGCC-TAAATAGGCTC........................................................................2490.1110100000000
..................................................................................................................................................................................................................CGGAGTTAGAGCC-TAAATAGG...........................................................................2190.1110100000000
................................................................................................................................................................................................................GTCGGAGTTAGAGCC-TAAATAGG...........................................................................2390.1110100000000
....TTTG--------------------------AAGCGCATTAT---AT---TGATTTGT......................................................................................................................................................................................................................................................2590.1110100000000
.......................................................................................................................................................................................................................TTAGAGCC-TAAATAGGCTCTGGCCC..................................................................25100.1010100000000
.....................................................TGATTTGTGTCAGG---AAAA--CTGTGT-A---GG..........................................................................................................................................................................................................................27100.1010000000100
........................................................TTTGTGTCAGG---AAAA--CTGTGT-A---G...........................................................................................................................................................................................................................23100.1010100000000
......................................................GATTTGTGTCAGG---AAAA--CTGTGT-A---G...........................................................................................................................................................................................................................25100.1010100000000
......................................................GATTTGTGTCAGG---AAAA--CTGTGT-................................................................................................................................................................................................................................23110.0910100000000
......................................................GATTTGTGTCAGG---AAAA--CTG....................................................................................................................................................................................................................................20110.0910100000000
.....................................................TGATTTGTGTCAGG---AAAA--CTG....................................................................................................................................................................................................................................21110.0910100000000
.......................................................ATTTGTGTCAGG---AAAA--CTGTG..................................................................................................................................................................................................................................21110.0910100000000
.............................................................................................................................................................................................................................CC-TAAATAGGCTCTGGCCC..................................................................19120.0810100000000
...............................................................................................................AATCCGACGAGCTGGACCCGAGCA............................................................................................................................................................................24130.0810000001000
..................................................................................................................CCGACGAGCTGGACCCGAGCA............................................................................................................................................................................21130.0810100000000
.................................................................................................................TCCGACGAGCTGGACCCGAGC.............................................................................................................................................................................21130.0810100000000
.................................................................................................................TCCGACGAGCTGGACCCGAGCACAGCAA......................................................................................................................................................................28130.0810100000000
.............................................................................................................CCAATCCGACGAGCTGGACC..................................................................................................................................................................................20130.0810100000000
............................................................................................................ACCAATCCGACGAGCTGGA....................................................................................................................................................................................19130.0810100000000
..................................................................................................................CCGACGAGCTGGACCCGAG..............................................................................................................................................................................19130.0810100000000
.............................................................................................................CCAATCCGACGAGCTGGACCCGAGC.............................................................................................................................................................................25130.0810000000010
...................................................................................................................CGACGAGCTGGACCCGAGCACAG.........................................................................................................................................................................23130.0810100000000
..............................................................................................................CAATCCGACGAGCTGGACCCG................................................................................................................................................................................21130.0810100000000
..................................................................................................................CCGACGAGCTGGACCCGAGCACAGCAA......................................................................................................................................................................27130.0810100000000
.................................................................................................................TCCGACGAGCTGGACCCGAGA.............................................................................................................................................................................21130.0810000100000
..................................................................................................................CCGACGAGCTGGACCCGAGCACAG.........................................................................................................................................................................24130.0810100000000
...........................................................................................................................TGGACCCGAGCACAGCAAGAATG.................................................................................................................................................................23140.0710000000100
.....................................................................................................................................CACAGCAAGAATGCGCGA............................................................................................................................................................18140.0710100000000
..........................................................................................................................CTGGACCCGAGCACAGCAAGAATGCG...............................................................................................................................................................26140.0710000000010
...........................................................................................................................TGGACCCGAGCACAGCAAGAATGC................................................................................................................................................................24140.0710000000010
...........................................................................................................................TGGACCCGAGCACAGCAAGAATGCG...............................................................................................................................................................25140.0710000000100
droPer2
TTTTTTTG--------------------------AAGCGCATTAT---AT---TGATTTGTGTCAGG---AAAA--CTGTGT-A---GCTAGGGGAGAAAGAACCCCGACCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCGCCTTTGAACCTAGCTTCCTATTAACATGAGGTCAGAAAAAAACCATCTATTGGCCAATATCGGAGTTAGAGCC-TAAATAGGCTCTGGCCCTAACTCACTGGCGAAGACTGAACACTACAAGTG-TAGTT--C------------------GGCAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................GAAGACTGAACACTACAAGTG-TAGT............................2514.004031000
............................................................................................................................................................................................................................................................CGAAGACTGAACACTACAAGTG-TAG.............................2511.001100000
.............................................................................................................................................................................................................................................................GAAGACTGAACACTACAAGTG-TAG.............................2411.001010000
.............................................................GTCAGG---AAAA--CTGTGT-A---GCTAGGG.....................................................................................................................................................................................................................2490.565030002
.............................................................GTCAGG---AAAA--CTGTGT-A---GCTAGGGG....................................................................................................................................................................................................................2590.444040000
.........................................................................................................CCGACCAATCCGACGAGCTGGAC...................................................................................................................................................................................23100.303030000
...................................................................................................................................................................CTTCCTATTAACATGAGGTCAGAA........................................................................................................................2440.251010000
............................................................................................................ACCAATCCGACGAGCTGGACCCGAG..............................................................................................................................................................................2580.252020000
.............................................................GTCAGG---AAAA--CTGTGT-A---GCTAGG......................................................................................................................................................................................................................2390.222020000
.....................................................TGATTTGTGTCAGG---AAAA--CTGTGT-A---GC..........................................................................................................................................................................................................................2790.222010001
..........................................................TGTGTCAGG---AAAA--CTGTGT-A---GCTAGG......................................................................................................................................................................................................................2690.222020000
....................................................................................................................................................................................................................................TAGGCTCTGGCCCTAACTCACTGGCGA....................................................2750.201010000
................................................................................................................................................................................................................................TAAATAGGCTCTGGCCCTAACTCAA..........................................................2550.201010000
....................................................................................................................................................................................................................................TAGGCTCTGGCCCTAACTCAC..........................................................2160.171010000
.............................................................GTCAGG---AAAA--CTGTGT-A---GCTAGGGGAG..................................................................................................................................................................................................................2780.131010000
.................................................................................................................TCCGACGAGCTGGACCCGAGCACAGC........................................................................................................................................................................2680.131010000
........................................................................................................CCCGACCAATCCGACGAGCTGGACC..................................................................................................................................................................................2580.131010000
..............................................................TCAGG---AAAA--CTGTGT-A---GCTAGG......................................................................................................................................................................................................................2290.111010000
.............................................................GTCAGG---AAAA--CTGTGT-A---GCTAG.......................................................................................................................................................................................................................2290.111010000
.............................................................GTCAGG---AAAA--CTGTGT-A---GCTAGGGGA...................................................................................................................................................................................................................2690.111010000
..........................................................................................................CGACCAATCCGACGAGCTGGAC...................................................................................................................................................................................22100.101010000
.............................................................................TGTGT-A---GCTAGGGGAGAAA...............................................................................................................................................................................................................19100.101010000
...............................................................................TGT-A---GCTAGGGGAGAAAGAAC...........................................................................................................................................................................................................21110.091010000
droWil2
TTTTCTTA--------------------------ACGCGCATTAA---AT---TTATTAATGATAGT---GAG------TGT-G---AAAAGGGGAGAAAGAACCCCGACCAATCCGACGAGCTAGACCCGAGCATAGCAAGAATGCGCACCCTCGAACCT--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................CATAGCAAGAATGCGCACCCTCGA......................................................................................................................................................24180.11202000
..........................................TAA---AT---TTATTAATGATAGT---GAG------TGT-................................................................................................................................................................................................................................25200.10200020
.....................................................................................................................................CATAGCAAGAATGCGCACCCTCGAACC...................................................................................................................................................27170.06100010
......................................................................................................................................ATAGCAAGAATGCGCACCCTCG.......................................................................................................................................................22180.06101000
...............................................................................................................AATCCGACGAGCTAGACCCGAGCAT...........................................................................................................................................................................25200.05101000
...........................................................ATGATAGT---GAG------TGT-G---AAAAGGGGA...................................................................................................................................................................................................................24200.05100010
...........................................................ATGATAGT---GAG------TGT-G---AAAAGGGG....................................................................................................................................................................................................................23200.05100100
.........................................................TAATGATAGT---GAG------TGT-G---AAAAGG......................................................................................................................................................................................................................23200.05100010
...........................................................ATGATAGT---GAG------TGT-G---AAAAG.......................................................................................................................................................................................................................20200.05100010
............................................................................................................ACCAATCCGACGAGCTAGACCCGAG..............................................................................................................................................................................25200.05100010
droVir3
TCTCTCTGT-------------------------CCGCGCATTAA---TAATATTACGTATGTCAGAG---TAC--ACGTTC-A---ATTTGGTTA-GAAGGACCCCGACCGATCCGACGAGCTAGACTGGAGCATAGCTAGAATGCGCATCT-CGAACCCAATTGCACATT---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................TAGACTGGAGCATAGCTAGAATGCGC..............................................................................................................................................................2612.002000000002000000000000000000000000000000000000000000000000000000
.........................................................................................TTGGTTA-GAAGGACCCCGACCGATCCGA.............................................................................................................................................................................................2812.002000000000000000000000000010000000010000000000000000000000000000
...........................................................................................................................TAGACTGGAGCATAGCTAGAATGCGCA.............................................................................................................................................................2711.001000001000000000000000000000000000000000000000000000000000000000
.......................................................................TAC--ACGTTC-A---ATTTGGTTA-GAAGGACCC.........................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................AGACTGGAGCATAGCTAGAATGCGCA.............................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................TTGGTTA-GAAGGACCCCGAC.....................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................ATAGCTAGAATGCGCATCT-CG.......................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
droMoj3
CTGAA-------------------------------GCGCACTAT-AAC----TAAAGTGTGTTAGGG---TACAATAGTGTAG---AATAGGTGGAGAAGAACCCCGAC-AATCCGGCGAGCTAGATACGAGCATAGCAAGAGTGCGCACCTCGAAGCCT--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................TTAGGG---TACAATAGTGTAG---AATAGGTG....................................................................................................................................................................................................................2720.501000010
..........................................................................................................CGAC-AATCCGGCGAGCTAGATACGAGC.............................................................................................................................................................................2740.251000010
........................................................................................................CCCGAC-AATCCGGCGAGCTAGATACG................................................................................................................................................................................2640.251100000
........................................................................................................CCCGAC-AATCCGGCGAGCTAGATAC.................................................................................................................................................................................2540.251000010
.........................................................................................................................GCTAGATACGAGCATAGCAAGAGTGC................................................................................................................................................................2650.201010000
...................................................................................................AGAACCCCGAC-AATCCGGCGAGC........................................................................................................................................................................................23120.081000010
droGri2
TTTTGTTA--------------------------CCGCGCACTAT---ATAAATGAATTGTGTTA----------------------CTTGGGAGAGGAAGAACCCCAAC-AATCCGACGAGCTAGAACCGCGCATAGCGAGAGTACTC------AAACCTA-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GTTCCAACTCGTAC--------------------AAGGGCATCAA-----------------GTACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGACTTCCGCCCTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGA............23201.05211911000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACT..........23200.8517970100
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGACTTC........27200.65131030000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCC..............29200.6012750000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGAC...........24200.459450000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGA..................25200.408440000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACTTC........25200.408710000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGACT..........25200.357520000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCG.............22200.306600000
...................................................................G---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCC..............28200.306240000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGC...............28200.255230000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACTT.........24200.255500000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGG...................24200.255212000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGAC...........22200.255230000
..........................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGAC...........27200.255320000
..........................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCC..............24200.204130000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGAT.................26200.204031000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATG................27200.153021000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGACTT.........26200.153300000
.........................................................................CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCC..............25200.153030000
...................................................................G---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATG................26200.153021000
..........................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCG.............25200.153300000
.........................................................................CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGA..................21200.102101000
...................................................................G---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGA..................24200.102200000
.........................................................................CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGAC...........28200.102110000
.......................................................................CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATG................25200.102020000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACC..........23200.102020000
...................................................................G---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGC...............27200.102200000
.......................................................................................................................................................................................................................................................................................GTCTAGCGGATGCCGACTTCCGCCC...25200.102200000
...................................................................................................................................................................................................................................................................................CCATGTCTAGCGGATGCCGACTTCC.......25200.102200000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGACC..........25200.102020000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACTTCC.......26200.102200000
.......................................................................................................................................................................................................................................................................................GTCTAGCGGATGCCGACTTCCGC.....23200.102020000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGA............21200.102200000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCC..............19200.102110000
....................................................................................................................................................................................................................................................................................CATGTCTAGCGGATGCCGACTTCCG......25200.102200000
........................................................................CCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCC..............26200.102020000
...................................................................................................................................................................................................................................................................................CCATGTCTAGCGGATGCCGAC...........21200.051100000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACTTCCG......27200.051100000
........................................................................CCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGA............28200.051010000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCGACTTCCGCC....29200.051010000
...............................................................TACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGA..................28200.051100000
................................................................ACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCT........................21200.051001000
...........................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGACT..........27200.051100000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCC..............21200.051010000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATCAG..............29200.051010000
........................................................................CCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGC...............25200.051010000
..................................................................TG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGC.....................22200.051010000
..........................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGACT..........28200.051100000
...............................................................TACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGC.....................25200.051100000
.........................................TCAA-----------------GTACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG.................................18200.051100000
..........................................CAA-----------------GTACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGT..........................24200.051100000
..........................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGA............26200.051100000
...........TAC--------------------AAGGGCATCAA-----------------GTACTG---C...........................................................................................................................................................................................................................................21200.051100000
...........................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCG.............24200.051100000
...................................................................................................................................................................................................................................................................................CCATGTCTAGCGGATGCCGACTTCCG......26200.051100000
.......................................................................................................................................................................................................................................................................................GTCTAGCGGATGCCGACTTCCGCC....24200.051100000
..........................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGA..................20200.051010000
.........................................................................CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGA............27200.051100000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGACTTCT.......28200.051100000
......................................................................................................................................................................................................................................................................................TGTCTAGCGGATGCCGACTTCCGC.....24200.051010000
.......................................................................CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGG...................22200.051100000
..................................................................................................................................................................................................................................................................................TCCATGTCTAGCGGATGCCG.............20200.051001000
.........................................................................CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGC...............24200.051100000
...............................................................................................................................................................................................................................................................................CTGTCCATGTCTAGCGGATGCCGACTTC........28200.051100000
.................................................................................................................................................................................................................................................................................GTCCATGTCTAGCGGATGCCGACTTC........26200.051100000
...........................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGAC...........26200.051010000
...............................................................TACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCG....................26200.051100000
.........................................TCAA-----------------GTACTG---CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTA.......................28200.051100000
................................................................................................................................................................................................................................................................................TGTCCATGTCTAGCGGATGCCGACTTG........27200.051100000
...........................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCCGA............25200.051100000
.......................................................................CCCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATGTCTAGCGGATGCC..............27200.051010000
droBip1
CTACAGGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGTTACCTCCG-GTGCCGGTTACCTCCGGTGSizeHit CountTotal NormTotal
No Reads
droKik1
TTATCT-----------------------------CGCGCATTAT---A----TGCATTGTGTT-GT---AAAC--A----A-A---GCTATGGGAGAAAAAACCCCGCCCCATCCGACGAGCTGGACCCGAGCACAGCGAGAATGCGCACCCTCGAACCTAGCGTCTTA-----------------AAGAACCACCTTTACGGAACGATCATAGTT-------------------------------------------------------------------------GGTAGGCCCTTATAGGCSizeHit CountTotal NormTotal
No Reads
droFic1
CTTTTGATT----------------ATTACGCAC-----------T-AG----TAAAGTGTGGTAGCG---TGCAACCGTAC-CCTC-TCAAGCAAGGAAGAACCCCGAC--ATCCGGCGAGCTAGAACCGAGCCTAGCAAGAGTGCGTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
A------------------------------------------------------------------------------------------------------------CCAATCCGACGAGCTGGACCCGAGCACAGCAAGAATGCGCACCATCAACCCTAGCTTCTTA-----------------AATTAACATCTATATGCAGCTGTGGTATTTAGAGACTTTTATAGGCT-------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTTTTGATT----------------ATTACGCAC-----------TAAA----TAAATTGTGGTAGCG---CGCAACCGTAC-CATC-TCAAGCAAGGAAGAACCCCGAC--ATCCGGCAAGCTAGACCCGAGCCTAGCAAGAGTGCGTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTTAAAC-----------------------------------------CA---TGATTTGCGTTCGT---AAAC--TTAGGT-A---GCTAAAAGGGAAAGGACCCCGACCAATCCAACGATCTAGACCCGAGCACCGCTAGATTGCGCACCAGCGCACCCAGTTCCTT-CTAACAGTAAGTCATAACTAAA--ATAATGTGGCTA-------------------------------------------------------------------------------------------------ATGTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTTTTGT-G-AT--------------------CAGCGCATTAAAC-AT---TGATTTGTGTTAGT---AAAC--TTAGGT-A---ACTGGGAGAGAAAGGACCCCGACCAATCCGACGAGCTGGACCCGAGCACCGCTAGAATGCGCACCGTCGATCCCAGTTCCTTTTTAATAGTGAGTCAGAACCAA--CATCATGTGGCCAATGTGATAGAAAGAGTC-T-TATAGACTTTGGCA-TCGCTTCTTGTCCTAAACTGAACACTACACAATCTGGCGC--------------------CCAACGSizeHit CountTotal NormTotal
No Reads
droEug1
GACGG--------------------------------------------------------------------------------------------------------CCAATCAGTCCAACTACG-------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGTGTGGATGCCGGTTACCGCCATGCSizeHit CountTotal NormTotal
No Reads
dm3
CCATCCCAC----------------------------------------------------------------------------------------------------------------------------------------------CCGCGAACGCTGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTCCTCTGGCTGTCGGTTGCCTCCATGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................TACATTTCCTCTGGCTGTCGGTT..........23204.158300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100420000010000000000000000000000000000000000000000000000013000000000001200000000000023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090018000000
.................................................................................................................................................................TGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTCCTCTGGC..................2834.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000024000000000101200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCCAC----------------------------------------------------------------------------------------------------------------------------------------------CCGCGAACGCTGCGCC............................................................................................................................................2123.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TACATTTCCTCTGGCTGTCGGT...........22203.35670000000000000000000000000000000000000000000001003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000060000000000000000000000000000000000000400000001300000000000000000000015000010000000000000000000000000000000000000000000000000000000000005000000000000000300000000000000000000000000
........................................................................................................................................................................CA-----------------A-----------------------------------------------------------------------------------GCCTACATTTCCTCTGGC..................2133.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CGCTGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTCC........................2533.33100000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000100000000002000000000000000000000000000000000010000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CGCTGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTC.........................2433.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000001000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................TGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTCCTC......................2433.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000401020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TACATTTCCTCTGGCTGTCGGTTGCC.......26202.7555000000000000000000000000000000000000000020000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000200000000000000000400000019210000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000
...........................................................................................................................................................GAACGCTGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATTTC.........................2732.6780000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CGCGAACGCTGCGCCCCA-----------------A-----------------------------------------------------------------------------------GCCTACATT...........................2832.6780000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010003030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................ACATTTCCTCTGGCTGTCG.............19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTTCCTCTGGCTGTCGGTTGCCTCCAT..27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CCTACATTTCCTCTGGCTGTCTCG...........24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TACATTTCCTCTGGCTGTCGGTTTT........25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAGCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACCTCCATGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACC.......256535.17321103701910407051708267197472827000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAC........246154.009240010600134403104121422966000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTC.....275145.407270045260953433729801782000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCT......266123.177390241800118288606114013710000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTA.........23684.33506001140058135242840017828000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCT...........21650.8330512240260551041912603719000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTT..........22638.8323300310018445812011032000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGC............20635.0021001116000193289110113000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCCA...29524.8012400000030780100150000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAAA.......25614.6788000000313210771000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCC....28514.60730031008381110200000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCT...........24610.50630001002128831010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCC..............1869.83590116026007125001000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCG.............1969.83590010100571533096000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACC.......2868.50510000001430320020000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTA..........2268.1749000000010000435000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTAC........2767.33440000001118180060000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACAA......2667.3344000000350300330000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAAAA......2667.0042000000152100312000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACA.......2565.3332000100292600102000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAA........2464.6728000000221110210000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACAAA.....2753.8019000000100000171000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAT........2463.1719000000011000125000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCA......2662.8317000000130300100000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTC.....2452.401200000022130040000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTT.....2752.401200000011000091000
...CCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCT...........2562.171300000054121000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGC...............1762.171300000035023000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACT.......2562.001200000001200081000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACC.......2262.001200100012602000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTA.........2661.831100000024030020000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTA.....2751.80900000000000081000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTAT.........2361.6710000000000000100000
.....GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACC.......2761.671000000054010000000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCCA...2651.60800000010010060000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCT......2361.50900010022120010000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGC............2361.50900000043020000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCAA..........2261.50900000000000090000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTAC........2161.33800000032102000000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCC....2551.20600020001011010000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCTCCA...2551.20600100000003020000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTT.........2361.17700000003011002000
.........................................................................................................................................................................................................................................................................................CGTCCGGCTGCCGCTTACCTCCAT..2461.17700000000010060000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAAT.......2561.17700000000000061000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCT.................1571.14800000011105000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTATAA......2661.00600000000000051000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGCCGCTTACCTC.....2651.00500010021000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCA....2851.00500000001000040000
.....GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTAC........2660.83500000010300010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCC...........2160.83500500000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTATT.......2560.83500000000200012000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCC......2660.83500300002000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGT............2060.83500000000000023000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCTCC....2450.80400000010101010000
........................................................................................................................................................................................................................................................................................TCGTCCGGCTGCCGCTTACCTCCA...2450.80400010010002000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTT..........2560.67400000010110010000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGCCGCTT..........2160.67400100000000021000
...........................................................................................................................................................................................................................................................................................TCCGGCTGCCGCTTACCTCCATGC2460.67400000002200000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCG......2660.67400400000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTATA.......2560.67400000010000030000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCT.............1960.67401000000000012000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCTCCAT..2650.60300000001000020000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCCAT..3050.60300000030000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACAAT.....2750.60300000000000030000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTG................1670.57400000012010000000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTAC........2560.50300000012000000000
...CCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGC............2460.50300000001200000000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCT......2260.50300000000102000000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTA.........2460.50300000000020001000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACC.......2160.50300100000101000000
..GCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGC..................1970.43300300000000000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTG................1970.43300000000000021000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCCATG.3150.40200000011000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCCAA..3050.40200000002000000000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCCAT..2750.40200000001000010000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCTCCATG.2750.40200000000010010000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCTC.....2350.40200000000001010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCAAA....2850.40200000000100010000
........................................................................................................................................................................................................................................................................................TCGTCCGGCTGCCGCTTACCTCCATGC2750.40200000000001010000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCCAA..2750.40200000000000020000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCG.............2260.33200000001100000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGG............2060.33200200000000000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGC...............2060.33200000000100001000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTAG........2460.33200000000000020000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCA...........2460.33200000000000020000
...CCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGC...............2160.33200000000101000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCA...........2160.33200000010010000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGTAA..........2260.33200000000000002000
.....................................................................................................................................................................................................................................................................................ATTTCGTCCGGCTGCCGC............1860.33200100000001000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTTA........2460.33200000000000011000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTA.........2060.33200000010001000000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGCCGCTTACCT......2560.33201000001000000000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGCCGCTTA.........2260.33200200000000000000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGCCGCTTACC.......2460.33200010000010000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCC..............2160.33200200000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTAC.........2360.33200000000000011000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGC............1760.33200000001001000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACG.......2560.33200000002000000000
...CCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCC..............2260.33200200000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACTA......2660.33200000000000020000
..GCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCT...........2660.33200000001010000000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTAC........2060.33200000000002000000
.........................................................................................................................................................................................................................................................................................CGTCCGGCTGCCGCTTACCTCCATG.2560.33200000001000100000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCC..............1960.33201100000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCAA.............19100.30300000000000021000
CAGCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTC......................1770.29200000000002000000
...CCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTG................2070.29200000000000011000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGA...............1770.29200000001010000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCAA.....2750.20100000000000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTCCT...2950.20100000001000000000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCCATG.2850.20100000001000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTTTT...2950.20100000010000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACCTTT....2850.20100000000000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACTAA.....2750.20100000000000010000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACCTCC....3150.20100000001000000000
........................................................................................................................................................................................................................................................................................TCGTCCGGCTGCCGCTTACCTCCAAAA2750.20100000000000010000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACCTC.....3050.20100000001000000000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTTTT...2650.20100000000000010000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCCT...2650.20100000000000010000
......................................................................................................................................................................................................................................................................................TTTCGTCCGGCTGCCGCTTACCTCCAAT.2850.20100000000000010000
.....................................................................................................................................................................................................................................................................................ATTTCGTCCGGCTGCCGCTTACCTTA....2650.20100000000000010000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACCTC.....2850.20100000000000010000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACCTCCC...2550.20100010000000000000
.....................................................................................................................................................................................................................................................................................ATTTCGTCCGGCTGCCGCTTACCTCCAT..2850.20100000001000000000
.............................................................................................................................................................................................................................................................................................CGGCTGCCGCTTACCTCCATGC2260.17100000001000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTC.........2360.17100000001000000000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACC.......2660.17100000010000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTTTT.......2560.17100000000000010000
...........................................................................................................................................................................................................................................................................................TCCGGCTGCCGCTTACCTCCATG.2360.17100000000000010000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCG.............2060.17100100000000000000
.........................................................................................................................................................................................................................................................................................CGTCCGGCTGCCGCTTACCTCCATGC2660.17100000000000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTTAT.......2560.17100000000000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTACGC......2660.17100010000000000000
.....................................................................................................................................................................................................................................................................................ATTTCGTCCGGCTGCCGCTTAC........2260.17101000000000000000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGG............2160.17100100000000000000
............................................................................................................................................................................................................................................................................................CCGGCTGCCGCTTACCTCCAT..2160.17100000000000001000
.........................................................................................................................................................................................................................................................................................CGTCCGGCTGCCGCTTACCTCC....2260.17100000000001000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGA............2060.17100000000010000000
.....GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGC...............1960.17100010000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCG...........2160.17100000001000000000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGC...............1660.17100000000001000000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTACAA......2260.17100000000010000000
.......................................................................................................................................................................................................................................................................................TTCGTCCGGCTGCCGCTTA.........1960.17100000000001000000
.....GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTA.........2560.17100000000010000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTAT........2760.17100000001000000000
....................................................................................................................................................................................................................................................................................AATTTCGTCCGGCTGCCGC............1960.17100000001000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCA.............1960.17100000001000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCAA............2060.17100000000000001000
..GCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTA.........2860.17100000000000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCGA..........2260.17100000000000001000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTCT.........2360.17100000000000010000
......C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGC...............1860.17110000000000000000
.....GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCG.............2160.17100000001000000000
..GCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGC............2560.17100010000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTTT........2460.17100000000000010000
.........................................................................................................................................................................................................................................................................................CGTCCGGCTGCCGCTTACCTC.....2160.17100100000000000000
....CGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCGCTTACCT......2960.17100000010000000000
.AGCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCCG.............2560.17100010000000000000
............................................................................................................................................................................................................................................................................................CCGGCTGCCGCTTACCTCCATG.2260.17100000000000010000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTG..........2260.17100000010000000000
.AGCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCGTCCGGCTGCC..............2460.17100010000000000000
...................................................................................................................................................................................................................................................................................TAATTTCGTCCGGCTGCCGCTTATTC......2660.17100000000000010000
droSec2
TCACTAGCG-GAAAACTATCACTCT---------CCGCGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCATCCAGTTGCCGCTTGCCTCCTTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTTTTGGTT-A-AT---------C----------TCGCGCATTAA---T----TGACTTGTGTTAAAAGGAAA------GAT-A---GCTAGGGGAGAAAGTACCCCGACCAATCCGACGAGCTGGACCCGAGCTCAGCAAGAATGCGCACCGTCGAACCTAGCTTCTTAT--------------AAAAGAAACATCTTTGGGCAACGGTCATAGTT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GTTTATGAG---T------------AAGACGCAC-----------TTAT----TAAAATGTAGTAGCG---TTT---CGTAC-TATC-CTAAGC-TAAAAGAACCCCGACC--TACGGCGAGCTAGACCCGAGCATAGCAAGAGTGCGCATCCCTA------------------------------------------------------------------------------------------------------------------------------------------CTTTTATTAATATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................TAAGC-TAAAAGAACCCCGACC--TACGGCG...........................................................................................................................................................................................28200.801616000000
...TATGAG---T------------AAGACGCAC-----------TTAT----T.............................................................................................................................................................................................................................................................21200.1530000300
................................................................................AC-TATC-CTAAGC-TAAAAGAACCCCGACC--..................................................................................................................................................................................................28200.1022000000
............................................................................................GC-TAAAAGAACCCCGACC--TACGGCG...........................................................................................................................................................................................25200.1022000000
.........................................................................T---CGTAC-TATC-CTAAGC-TAAAAGAACCC.........................................................................................................................................................................................................27200.1022000000
................................................T----TAAAATGTAGTAGCG---TTT---CGTA..................................................................................................................................................................................................................................23200.0511000000
....................................................................................ATC-CTAAGC-TAAAAGAACCCCGACC--T.................................................................................................................................................................................................26200.0511000000
..........................................................TGTAGTAGCG---TTT---CGTAC-TATC-CTAAGC-....................................................................................................................................................................................................................28200.0511000000
GTTTATGAG---T------------AAGACGCAC-----------TTAT----T.............................................................................................................................................................................................................................................................24200.0511000000
.......................................................AAATGTAGTAGCG---TTT---CGTAC-T...............................................................................................................................................................................................................................22200.0511000000
.........................................................................T---CGTAC-TATC-CTAAGC-TAAAAGAACCCC........................................................................................................................................................................................................28200.0510100000

Generated: 05/18/2015 at 02:20 AM