ID:

dps_1962

 Coordinate:

Unknown_group_315:7582-7732 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.6 -8.0

Flybase annnotation

exon [dpse_GLEANR_8820:5]; CDS [Dpse\GA28709-cds]; intron [Dpse\GA28709-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTCCAGGGTCTCGATAGCCCCAGGTTCATCGCATTTTCTACATCTCTGTTGGTGATGCCTAGCTTTGTTGCATGTGCAGCAGCCAGGAAATAACCTGTTAGTATTCCGACTAACAATCTACAGTCCTTTCGTGGTAGGTGCCGTAGGTAGTGGCTTAGTTTCTCGTTGCGTTCCTTGCACATTATTTTCGAGGTTCTGCAGGTACCACCACCTGCTCCACCACCTGCTCCACCTCCTCCACCTGCTATCAG
**********************************************************************************************************************...............(((((...(((((..((.(((...))).))..)))))...)))))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 V112
male body		 M059
embryo
 M062
head
 GSM343916
embryo
 GSM444067
head
 M022
male body
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGCCG............................................................................................................ 25 0 1 11.00 11 11 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGC.............................................................................................................. 23 0 20 8.40 168 151 0 0 12 2 0 0 3 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTG............................................................................................................... 22 0 20 7.05 141 141 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGG................................................................................................................. 20 0 20 4.20 84 34 0 0 50 0 0 0 0 0
..........................................................................................................................................................TTAGTTTCTCGTTGCGTTCCTTGC......................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGCC............................................................................................................. 24 0 1 3.00 3 2 0 0 0 0 1 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTTGC.................................................................................. 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0
.........................................ATCTCTGTTGGTGATGCCTAGCT........................................................................................................................................................................................... 23 0 3 3.00 9 8 0 0 0 1 0 0 0 0
...............................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCAGG................................................. 27 0 6 2.33 14 12 0 0 0 1 0 1 0 0
...............................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCAG.................................................. 26 0 6 2.00 12 8 4 0 0 0 0 0 0 0
....................................................................TGCATGTGCAGCAGCCAGGAAAT................................................................................................................................................................ 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTTG................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTTGCG................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGT..................................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0
................................................................................................................................................AGGTAGTGGCTTAGTTTCTCGT..................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTT.................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCT........................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCG...................................................................................... 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................TATTTTCGAGGTTCTGCAGG................................................. 20 0 6 1.50 9 8 0 0 0 1 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGT................................................................................................................ 21 0 20 1.50 30 22 0 0 0 1 0 7 0 0
.........................................ATCTCTGTTGGTGATGCCTAGC............................................................................................................................................................................................ 22 0 3 1.33 4 4 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CATTATTTTCGAGGTTCTGCAGGTAC.............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTTTCGT..................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................AGGTAGTGGCTTAGTTTCTCGTT.................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................GGCTTAGTTTCTCGTTGCGTTCCT............................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGATG................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................TCCTTTCGTGGTAGGTGCCGTA.......................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TGGCTTAGTTTCTCGATGCGTTCCT............................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAGGTAGTGGCTTAGT............................................................................................ 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................GGCTTAGTTTCTCGTTGCGTTCCTTG.......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TAGTTTCTCGATGCGTTCCTTGCAC....................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CAGTCCTTTCGTGGTAGGTGCCG............................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTTTCGAGGTTCTGCAGGTACCACCAC........................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TAGTTTCTCGATGCGTTCCTTGCACA...................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................AAATACATTCCTTTCGTGGTAGGTGCCG............................................................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTAGTTTCTCGATGCGTTCCTTGCAC....................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TTCGAGGTTCTGCAGGTACCACCAC........................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TATTTTCGAGGTTCTGCAGGT................................................ 21 0 6 0.83 5 4 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TCCTTGCACATTATTTTCGAGGTTC....................................................... 25 0 6 0.83 5 2 3 0 0 0 0 0 0 0
................................................TTGGTGATGCCTAGCTTTGTTGCATG................................................................................................................................................................................. 26 0 8 0.75 6 6 0 0 0 0 0 0 0 0
....................................................................TGCATGTGCAGCAGCCAAAAAA................................................................................................................................................................. 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0
.........................................ACTTCTGTTGGTGATGCCTAG............................................................................................................................................................................................. 21 2 3 0.67 2 0 0 2 0 0 0 0 0 0
..........................................TCTCTGTTGGTGATGCCTAGC............................................................................................................................................................................................ 21 0 20 0.55 11 11 0 0 0 0 0 0 0 0
........................................CATCTCTGTTGGTGATGCCTAGCTT.......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................CATCTCTGTTGGTGATGCCTAGC............................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
....................CAGGTTCATCGCATTTTCTACATCTC............................................................................................................................................................................................................. 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................TATTTTCGAGGTTCTGCAG.................................................. 19 0 6 0.50 3 2 0 1 0 0 0 0 0 0
......................................................................................................................................................................................TATCTTCGAGGTTCTGCAGGTA............................................... 22 1 20 0.45 9 9 0 0 0 0 0 0 0 0
..........................................TCTCTGTTGGTGATGCCTAGCTT.......................................................................................................................................................................................... 23 0 20 0.45 9 9 0 0 0 0 0 0 0 0
......................................................................................................................TTCAGTCCTTTCGTGGTAGGTGC.............................................................................................................. 23 1 20 0.40 8 0 0 0 0 8 0 0 0 0
..........................................................................................................................................................................................TTCGAGGTTCTGCAGGTAA.............................................. 19 1 5 0.40 2 0 0 2 0 0 0 0 0 0
.......................................................................................................................ACAGTCCTTTCGTGGTAGGTGC.............................................................................................................. 22 0 20 0.40 8 8 0 0 0 0 0 0 0 0
.......................................ATATCTCTGTTGGTGATGCCTAGCT........................................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................TGTCTAGCTTTGTTGCATGTGCAGCA.......................................................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................TGCATGTGCAGCAGCCAGG.................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................GCACATTATTTTCGAGGTTCTGCAGGT................................................ 27 0 6 0.33 2 2 0 0 0 0 0 0 0 0
.........................................ATCTCTGTTGGTGATGCCTAG............................................................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CACATTATTTTCGAGGTTCTGCAGG................................................. 25 0 6 0.33 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TATTTTCGAGGCTCTGCAGGTA............................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................ATCTCTGTTGGTGATGCCTAGCTA.......................................................................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................TGCATGTGCAGCAGCCAGAAAA................................................................................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGCGTTCCTTGCACATTATTTTCGAGG.......................................................... 27 0 7 0.29 2 2 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGAC............................................................................................................. 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0
.....................................................................GCATGTGCAGCAGCCAGGTT.................................................................................................................................................................. 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TAACAATCTACAGTCTTTTCGTGG..................................................................................................................... 24 1 14 0.21 3 3 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATCTTCGAGGTTCTGCAGGTA............................................... 21 1 20 0.20 4 4 0 0 0 0 0 0 0 0
.................................................TGGTGATGTCTAGCTTTGTTGC.................................................................................................................................................................................... 22 1 10 0.20 2 0 2 0 0 0 0 0 0 0
.....................................CTTTATCTCTGTTGGTGATGCCTAGC............................................................................................................................................................................................ 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAG.................................................................................................................. 19 0 20 0.20 4 3 0 0 0 1 0 0 0 0
................................................TTGGTGATGCCTAGCTTTGTTGC.................................................................................................................................................................................... 23 0 10 0.20 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGCACATTATTTTCGAGGTTCTG..................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTATTTTCGAGGTTCTGCAGGT................................................ 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
....................................................TGATGCCTAGCTTTGTTGCATGTG............................................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TTCACATTATTTTCGAGGTTCTGCAGG................................................. 27 1 6 0.17 1 0 0 0 0 1 0 0 0 0
................................................TTGGTGATGCCTAGCTTTGTTGCATGT................................................................................................................................................................................ 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTTCGAGGTTCTGTAGGAA............................................... 19 2 6 0.17 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTATTTTCGAGTTTCTGCAGGT................................................ 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGCACATTATTTTCGAGGTTCTG..................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTTGCACATTATTTTCGAGGTTCTGCAGG................................................. 29 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTTGCACATTATTTTCGAGGTTCTGCA................................................... 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................GTGATGCCTAGCTTTGTTGCATGT................................................................................................................................................................................ 24 0 6 0.17 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCA................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTTGCACATTATTTTCGAGGTTCTG..................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTTTCTCGTTGCGTTCCTTG.......................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................GTCCTTTCGTGGTAGGTG............................................................................................................... 18 0 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGA................................................................................................................ 21 1 20 0.15 3 3 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGCACATTATTTTCGAGGTTCT...................................................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................................TGTTGGTGATGCCTAGCTTTGTTGCATG................................................................................................................................................................................. 28 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TAACAATCTACAGTCCTTTCGTGGT.................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TAACAATCTACAGTCCTTTCGTGG..................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGTGCACATTATTTTCGAGGTTCTGC.................................................... 26 1 7 0.14 1 0 0 0 0 1 0 0 0 0
............................................TCTGTTGGTGATGCCTAGCTTTGTC...................................................................................................................................................................................... 25 1 8 0.13 1 0 1 0 0 0 0 0 0 0
............................................TCTGTTGGTGATGCCTAGCTTTGT....................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCAGC................................................. 27 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTCTTTTCGAGGTTCTGCGGGA................................................ 22 3 8 0.13 1 0 0 0 0 1 0 0 0 0
................................................TTGGTGATGCCTAGCTTTGTTGCA................................................................................................................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.................................................TGGTGATGCCTAGCTTTGTTGCAT.................................................................................................................................................................................. 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTTGCACATTATTTTCGAGGGTCT...................................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0 0
...........................................CTCTGTTGGTGATGCCTAGCTTTG........................................................................................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................TTGGCAATGCCTAGCTTTGTTGCATG................................................................................................................................................................................. 26 2 10 0.10 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCTCGTTGCGTTCCTTGCACA...................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................TGGCTTAGTTTCTCGTTGCGCTC.............................................................................. 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.................................................TGGTGATGCCTAGCTTTGTTGC.................................................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................ACAGTCCTTTCGTGGTAGG................................................................................................................. 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................CTCTGTTGGTGATGCCTAGCTT.......................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................CTACAGTCCTTTCGTGGTAGG................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...................................................GTGATGCCTAGCTTTGTTGCA................................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................CTAAGTTCTCGTTGCGTTCC............................................................................. 20 3 15 0.07 1 0 0 0 1 0 0 0 0 0
......................................................................................................................TGCAGTCCTTTCGTGGTAGGTGGC............................................................................................................. 24 2 17 0.06 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTTTCTCGTTGCGTTCCTTGCA........................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGG.............................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TGGCTTAGTTTCTCGTTGCGCTCCTT........................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGA................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................TTTTCGAGGTTCTGCAGGA................................................ 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................TCTCTGTTGGTGATGCCTGGC............................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTTTCTCGTTGCGTTCCTTGCACAT..................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TTTCTCGTTGCGTTCCTTG.......................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................TCTGTTGGGGATGCCTAGCTTTG........................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCTCGTTGCGTTCCTTGCACAT..................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................................TTGCTACAGTCCTTTCGTGGTAGGTGC.............................................................................................................. 27 3 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGAAA............................................................................................................... 22 3 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TAAAGTCCTTTCGTGGTAGGGT............................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................TAGTTTCTCGTTGCGCTCCTTGC......................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGCCCTTTCGTGGTAGGTGC.............................................................................................................. 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGT.............................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGCACATTATATTCGAGGTTCTGCAGG................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................CTCTGTTGGTGATGCCTAG............................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................CTCTGTTGGTGATGCCTAGCTC.......................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 1
......................................................................................................................TTCAGTCCTTTCGTGGTAGGTG............................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGCACATTATATTCGAGGTTCTGC.................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0
............................................TCTGTTGGTTATGCCTAGCTTTG........................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGCCCTTTCGTGGCGGG................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0
......................................................................................................................TACAGTCCTTTCGTGGTAGGTGCG............................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAATCCTTTCGTGGCAGGT................................................................................................................ 21 2 20 0.05 1 0 0 0 0 0 0 1 0 0
............................................TCTGTTGGTGATGCCTCGCTTTG........................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGCACATTATATTCGAGGTTCTGCAGG................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCCAGTCCTTTCGTGGTAGGCG............................................................................................................... 22 2 20 0.05 1 0 0 0 0 0 0 1 0 0
......................................................................................................................TACAGTCCTTTCGTGGAAGGT................................................................................................................ 21 1 20 0.05 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................TAGTTTCTCGTTGCGCTCCTTGCA........................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCTCGTTGCGTTCCTTGCACATTA................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGTCATTTCGTGGTAGGTGC.............................................................................................................. 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0
........................................TATCTCTGTTGGTGATGCCTAGCTTT......................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAGGTCCCAGAGCTATCGGGGTCCAAGTAGCGTAAAAGATGTAGAGACAACCACTACGGATCGAAACAACGTACACGTCGTCGGTCCTTTATTGGACAATCATAAGGCTGATTGTTAGATGTCAGGAAAGCACCATCCACGGCATCCATCACCGAATCAAAGAGCAACGCAAGGAACGTGTAATAAAAGCTCCAAGACGTCCATGGTGGTGGACGAGGTGGTGGACGAGGTGGAGGAGGTGGACGATAGTC
*************************************************************************...............(((((...(((((..((.(((...))).))..)))))...)))))********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 SRR902012
CNS imaginal disc
 SRR902011
testis
 M059
embryo
 GSM444067
head
 M062
head
 GSM343916
embryo
..............................................................................................................................................................................................................TGGTGTACGAGGTGGCGAAC......................... 20 3 19 18.26 347 241 0 93 3 0 1 7 2 0
........................................................................................................AGGCTGATTGTTAGATGTCAGGAA........................................................................................................................... 24 0 2 2.50 5 0 5 0 0 0 0 0 0 0
...........................................................................................................................................CGGCATCCATCACCGAATCAAAGAG....................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GGCATCCATCACCGAATCAAAGAGC...................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................CCAAGTAGCGTAAAAGATGTAGAGACA.......................................................................................................................................................................................................... 27 0 2 1.00 2 0 0 0 0 2 0 0 0 0
..................GGGTCCAAGTAGCGTAAAAGATGTA................................................................................................................................................................................................................ 25 0 2 1.00 2 0 2 0 0 0 0 0 0 0
....................GTCCAAGTAGCGTAAAAGATGTA................................................................................................................................................................................................................ 23 0 2 1.00 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................CATCCATCACCGAATCAAAGATC...................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0
.........................................................................................................GGCTGATTGTTAGATGTCAGGAA........................................................................................................................... 23 0 2 1.00 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................CATCCATCACCGAATCAAAGAGC...................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................GATTGTTAGATGTCAGGAAAGCAC...................................................................................................................... 24 0 7 0.86 6 0 0 0 0 6 0 0 0 0
.......................................................................................................AAGGATGTTTGTTAGATGTCAGGAA........................................................................................................................... 25 2 8 0.75 6 1 5 0 0 0 0 0 0 0
.................................................................................................AATCATAAGGCTGATTGTTAGATGT................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AAGACGTCCATGGCAGTG........................................ 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0
......................CCAAGTAGCGTAAAAGATGTAGAGACAA......................................................................................................................................................................................................... 28 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................AGACGTCCATGGCAGTGAA...................................... 19 3 11 0.45 5 0 0 0 5 0 0 0 0 0
........................................................................................................................................................................GCAAGGAACGTGTAATAAAAGCTC........................................................... 24 0 9 0.44 4 4 0 0 0 0 0 0 0 0
................................................................................................................................................................AGAGCAACGCAAGGAACGTGTAA.................................................................... 23 0 20 0.35 7 7 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AAGACGTCCATGGCAGTGAA...................................... 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0
.....................................................CTACAGATCGAAACAACGTACACGT............................................................................................................................................................................. 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................TACGGATCGAAACAACGTACACGT............................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........GCTATCGGGGTCCAAGTAGCGT.......................................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGGTGTACGAGGTGG.............................. 15 1 20 0.30 6 0 0 0 6 0 0 0 0 0
..........................................................................................................................................................................................................................TGGTGTACGAGGTGG.................. 15 1 20 0.30 6 0 0 0 6 0 0 0 0 0
.......................................................................................................................................................................CGCAAGGAACGTGTAATAAAAGCTC........................................................... 25 0 7 0.29 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGGTGTACGAGGTGGCGAACG........................ 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0
...........GCTATCCGGGTCCAAGTAGCGT.......................................................................................................................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0 0
............................................................................................................TGATTGTTAGATGTCAGGAA........................................................................................................................... 20 0 8 0.25 2 2 0 0 0 0 0 0 0 0
........................................................................................................AGGATGTTTGTTAGATGTCAGGAA........................................................................................................................... 24 2 9 0.22 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................AGCAACGCAAGGAACGTGTAATA.................................................................. 23 0 20 0.20 4 3 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TAATAAAAGCTCCAAGACGTCCA................................................ 23 0 6 0.17 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGAACGTGTAATAAAAGCTCCAAG....................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.........................................................GGATCGAAACAACGTACAC............................................................................................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTGTAATAAAAGCTCCAAGACGTCC................................................. 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................CTACGGATCGAAACAACGTACA................................................................................................................................................................................ 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TCAAAGAGCAACGCAAGGAACGTGT...................................................................... 25 0 20 0.15 3 2 1 0 0 0 0 0 0 0
..............................................................................................................................................................AAAGAGCAACGCAAGGAACGTGTAA.................................................................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CGCAAGGAACGTGTAATAAAAGCT............................................................ 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................................................................TGATTGTTAGATGTCAGGAAAGCAC...................................................................................................................... 25 0 7 0.14 1 0 0 0 0 1 0 0 0 0
................................................................................................................TGTTAGATGTCAGGAAAGCACCAT................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GGACGCGGTGGAGGAGATG.......... 19 2 8 0.13 1 1 0 0 0 0 0 0 0 0
.........................................................................................................GACTGATCGTTAGATGTCAGGAAAGCAC...................................................................................................................... 28 2 16 0.13 2 0 2 0 0 0 0 0 0 0
...........................................................................................................CCCTTTGTTAGATGTCAGGAA........................................................................................................................... 21 3 8 0.13 1 0 0 0 0 1 0 0 0 0
.............................................................................................................GATTGTTAGATGTCAGGAA........................................................................................................................... 19 0 8 0.13 1 0 0 0 0 0 0 0 1 0
....................................................GCTACGGATCGAAACAACGTACAT............................................................................................................................................................................... 24 2 9 0.11 1 0 0 1 0 0 0 0 0 0
.........................................................................................................GGATGTTTGTTAGATGTCAGGAA........................................................................................................................... 23 2 9 0.11 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAGGAACGTGTAATAAAAGCTC........................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0
..................................................CCACTACGGATCGAAACAA...................................................................................................................................................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGTACGAGGTGGCGGAC......................... 18 2 20 0.10 2 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................GAGCAACGCAAGGAACGTGTAA.................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................CAAAGAGCAACGCAAGGAACGTGT...................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.................................................................................................................GTTAGATGTCAGGAAAGCACCA.................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................TCAAAGAGCAACGCAAGGAACGTGTAA.................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAGAGCAACGCAAGGAACGTGT...................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAGAGCAACGCAAGGAACGTGTAATA.................................................................. 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAGAGCAACGCAAGGAAC.......................................................................... 18 0 20 0.10 2 0 2 0 0 0 0 0 0 0
............................................................................................................................................................TCAAAGAGCAACGCAAGGAACGTG....................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGACGCGGTTGAGGAGATG.......... 20 3 11 0.09 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................GGTGGACAAGGCGGTGGAC......................... 19 2 12 0.08 1 1 0 0 0 0 0 0 0 0
...................................................AACTACGGATCGAAACAACGT................................................................................................................................................................................... 21 1 13 0.08 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GTGCAGGAGGTGGACGTT.... 18 2 17 0.06 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GGGGACGCGGTGGAGGAGATG.......... 21 3 20 0.05 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................CAAAGAGCAACGCAAGGAACGTGTAA.................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GAGGAGGTGGACGATAGA. 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTCAGGAAAGCACCATCC................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAACGCAAGGAACGTGTAAT................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 1
................................................................................................................................................................AGAGCTACGCAAGGAACGTGTAA.................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTCAGGAAAGCACCATCCACG.............................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................GTTAGATGTCAGGAAAGCAC...................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................GCAACGCAAGGAACGTGTAATA.................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.............................................CTCAACCACTACGGATCGAAAC........................................................................................................................................................................................ 22 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................CAAAGAGCAACGCAAGGAACGTGTAATA.................................................................. 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................AGAGACAACCACTACGGATC............................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGGCGAGTTGGAGGCGGTG.......... 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................GAGACAACCACTACGGATCGAAA......................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................AGAGCAACGCAAGGAACGTGTAATA.................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AACGCAAGGAACGTGTAA.................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_315:7532-7782 - dps_1962 TTCCAGGGTCTCGATAGCCCCAGGTTCATCGCATTTTCTACATC----TCTGTTGGTGATGCCTAGCTTTGTTGCATGTGCAGCAGCCAGGAAATAACCTGTTAGTATTCCGACTAACAATCTACAGTCCTTTCGTGGTAGGTGCCGTAGGTAGTGGCTTAGTTTCTCGTTGCGTTCCTTGCACATTATTTTCGAGGTTCTGCAGGTACCACCACCTGCTCCACCACCTGCTCCACCTCCTCCACCTGCTAT-CAG-------------
droPer2 scaffold_71:228165-228415 + dpe_2053 TTCCAGGGTTTCGATAGCCCCAGGTTCATCGCATTTTCTACATC----TCTGTTGGTGATGCCTAGCTTTGTTGCATGTGCAGCAGCCAGGAAATAACCTGTTAGTATTCCGACTAACAATCTGCAGTCCTTTCGTGGTAGGTGCAGTAGGTAGTGGCTAAGTTTCTCGTTGCGTTCCTTGCACATTATTTTCGAGGTTCTCCAGGTACCACCACCTGCTCCACCACCTGCTCCACCTCCTCCACCTGCTAT-CAG-------------
droKik1 scf7180000298139:13233-13481 + CTCCAAGGTTTCGATTGCCTCGGATTCATCACATTTCCGGCATTTGGCGTTGTCGGTAATACCCAGCTTGACTGCATGTGCAGCAGACAGGCAGTGACCTGTAAGAATACCCACTAACATTCTGCAGTCCTTCCGCGGAAGATGCACCACGTAGTGGGTGAGTTTTTCGTTGTGTTCTTTGCACATGATTTTTGATATTCTGCAGGTTGCGGAAT-T------------------ACTCCTCCACCTGCTTT-TTGCGCTTGCGTCACG
droFic1 scf7180000453937:76054-76181 - TTTCAGTGTTTCGATTACCCAGGACTCACCACATTTCCTGCAATTGCTAATGTTGGTGGAGCGTAATTTGGTTGCGTGAAACACAGCCAGTCAATGATCTGTTAAAATCCTAATTAATAGTCTGCAAT---------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490633:10796-11028 + TTTCAGGGACTCGCATGAACCATCGTCATCGCATTTTCTTCAACTGTCATTGTTGGTGATGCCTAGCTTGACTGCGTGCGTCTCGATTAGACAGTGACCTGTGAGAATTCCTACTAGTAATCTGCAGTCCTTCCGTGGTAGGTGCAGTACATAGCAAATATGTTTCTCGTTGCGGTCCTTGCACATGATTCCTGAGATTTTGAATGCTTTGGT----------------------TCTTCTCCACCGGTTTT-TAG-------------
droRho1 scf7180000772497:2466-2529 - TCGTGA--------------------------------------------------------------------------------------------------------------------------------------TGTGCCGTCTGTATTGGCCGAATTTCTCGCATCATTTCCTATAGTTCCTTTGCGAAGT-----------------------------------------------------------------------
droBia1 scf7180000302482:33695-33918 + TTTCAGAGTTTCGATAGCCCCCAATTCATCGCAGTTTCTGCAGGTGCAGTTGTTAAGTTTTTCTA----------TTGTGATGCGACCAGACAGTGGCCTTTGAGGATTCCCACTAGCACTCTGCCGTCATTCCGTGGTAGGTGCAGAACACAGTGGCTGAGTTTATCGCTGCGCTCCTTACACATATTTTTTGAGATTCTGCAAATAATTGT----------------------ATTCTTCCACCTGTTATTTTG-------------
droTak1 scf7180000415295:45181-45413 - TTCCAGGGTTTCGATAGCCCCCGATTCATCACATTTCCTGCAGGCGCGGCTGTTGAGTATTCCGAGTGTGGTTGCGTGTGATGCGGCCAGACAGTGGCCTGTAAGGATTCCCACTAACAGTCTGCAGTCTTTCCGTGGTAGACGCCGTACATACTGGCTGAGTTTGTCGTTGCGCTCTTTGCAAATAGTTCTTGAGATTCGGCAGGTCTTGGT----------------------ATTCCTCCACCTGCTTT-TTG-------------
droYak3 v2_chr2L_random_031:96778-97013 - CTCCAATGTTTCGATTGCCTCGAATTCATCACATTTCCGGCATTGGGCGTTGTCGGTATTGCCCAGTTTGACTGCGTGTGCCGCAGCTAGGCAGTGACCTGTCATAAATCCCACTAACAGTCTGCAGTCTTTCCTTGGAAGATGCAGCACGTAGTGACTGAGTTTTGCGTTGCGCTCTTTGCACATGATTTTTGAGATTTTGCAGGTGGCGGAAAT-------------------TCTCCTTCATCTACTTT-TGG-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTCCAGGGTCTCGATAGCCCCAGGTTCATCGCATTTTCTACATC----TCTGTTGGTGATGCCTAGCTTTGTTGCATGTGCAGCAGCCAGGAAATAACCTGTTAGTATTCCGACTAACAATCTACAGTCCTTTCGTGGTAGGTGCCGTAGGTAGTGGCTTAGTTTCTCGTTGCGTTCCTTGCACATTATTTTCGAGGTTCTGCAGGTACCACCACCTGCTCCACCACCTGCTCCACCTCCTCCACCTGCTAT-CAG-------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTGCCG..........................................................................................................................25111.001101100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTGC............................................................................................................................23208.401680151200312000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTG.............................................................................................................................22207.05141014100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGG...............................................................................................................................20204.2084034000050000
..............................................................................................................................................................TTAGTTTCTCGTTGCGTTCCTTGC.......................................................................................2413.0030300000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTGCC...........................................................................................................................2413.0030201000000
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTTGC................................................................................................2613.0030200000010
.........................................ATC----TCTGTTGGTGATGCCTAGCT.........................................................................................................................................................................................................2333.0090810000000
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCAGG...............................................................2762.331401210100000
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCAG................................................................2662.00120800000040
........................................................................TGCATGTGCAGCAGCCAGGAAAT..............................................................................................................................................................................2312.0020000000020
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTTG.................................................................................................2512.0020100000010
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTTGCG...............................................................................................2712.0020200000000
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGT...................................................................................................2312.0020100000010
....................................................................................................................................................AGGTAGTGGCTTAGTTTCTCGT...................................................................................................2212.0020200000000
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCTCGTT..................................................................................................2412.0020200000000
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCT......................................................................................................2012.0020200000000
...................................................................................................................................................TAGGTAGTGGCTTAGTTTCTCG....................................................................................................2212.0020000000200
..........................................................................................................................................................................................TATTTTCGAGGTTCTGCAGG...............................................................2061.5090810000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGT..............................................................................................................................21201.503002210700000
.........................................ATC----TCTGTTGGTGATGCCTAGC..........................................................................................................................................................................................................2231.3340400000000
.......................................................................................................................................................................................CATTATTTTCGAGGTTCTGCAGGTAC............................................................2611.0010100000000
....................................................................................................................................................AGGTAGTGGCTTAGTTTCTCGTT..................................................................................................2311.0010100000000
...........................................................................................................................................................GGCTTAGTTTCTCGTTGCGTTCCT..........................................................................................2411.0010100000000
...............................................................................................................................TCCTTTCGTGGTAGGTGCCGTA........................................................................................................................2211.0010100000000
...................................................................................................................................................TAGGTAGTGGCTTAGT..........................................................................................................1611.0010000000010
...........................................................................................................................................................GGCTTAGTTTCTCGTTGCGTTCCTTG........................................................................................2611.0010100000000
............................................................................................................................CAGTCCTTTCGTGGTAGGTGCCG..........................................................................................................................2311.0010100000000
............................................................................................................................................................................................TTTTCGAGGTTCTGCAGGTACCACCAC......................................................2711.0010100000000
..............................................................................................................................................................................................TTCGAGGTTCTGCAGGTACCACCAC......................................................2511.0010100000000
..........................................................................................................................................................................................TATTTTCGAGGTTCTGCAGGT..............................................................2160.8350400000100
...............................................................................................................................................................................TCCTTGCACATTATTTTCGAGGTTC.....................................................................2560.8350200000030
....................................................TTGGTGATGCCTAGCTTTGTTGCATG...............................................................................................................................................................................................2680.7560600000000
..........................................TC----TCTGTTGGTGATGCCTAGC..........................................................................................................................................................................................................21200.551101100000000
........................................CATC----TCTGTTGGTGATGCCTAGCTT........................................................................................................................................................................................................2520.5010100000000
........................................CATC----TCTGTTGGTGATGCCTAGC..........................................................................................................................................................................................................2320.5010100000000
....................CAGGTTCATCGCATTTTCTACATC----TC...........................................................................................................................................................................................................................2620.5010010000000
..........................................................................................................................................................................................TATTTTCGAGGTTCTGCAG................................................................1960.5030200000100
..........................................TC----TCTGTTGGTGATGCCTAGCTT........................................................................................................................................................................................................23200.4590900000000
..............................................................................................................................................................................................TTCGAGGTTCTGCAGGTAA............................................................1950.4020000000200
...........................................................................................................................ACAGTCCTTTCGTGGTAGGTGC............................................................................................................................22200.4080800000000
........................................................................TGCATGTGCAGCAGCCAGG..................................................................................................................................................................................1930.3310100000000
....................................................................................................................................................................................GCACATTATTTTCGAGGTTCTGCAGGT..............................................................2760.3320200000000
.........................................ATC----TCTGTTGGTGATGCCTAG...........................................................................................................................................................................................................2130.3310100000000
.....................................................................................................................................................................................CACATTATTTTCGAGGTTCTGCAGG...............................................................2560.3320200000000
.........................................ATC----TCTGTTGGTGATGCCTAGCTA........................................................................................................................................................................................................2430.3310100000000
..........................................................................................................................................................................TGCGTTCCTTGCACATTATTTTCGAGG........................................................................2770.2920200000000
.........................................................................GCATGTGCAGCAGCCAGGTT................................................................................................................................................................................2040.2510100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAG................................................................................................................................19200.2040310000000
....................................................TTGGTGATGCCTAGCTTTGTTGC..................................................................................................................................................................................................23100.2020200000000
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCTG...................................................................2360.1710100000000
.........................................................................................................................................................................................TTATTTTCGAGGTTCTGCAGGT..............................................................2260.1710100000000
........................................................TGATGCCTAGCTTTGTTGCATGTG.............................................................................................................................................................................................2460.1710100000000
....................................................TTGGTGATGCCTAGCTTTGTTGCATGT..............................................................................................................................................................................................2760.1710100000000
..................................................................................................................................................................................TTGCACATTATTTTCGAGGTTCTG...................................................................2460.1710100000000
.................................................................................................................................................................................CTTGCACATTATTTTCGAGGTTCTGCAGG...............................................................2960.1710100000000
.................................................................................................................................................................................CTTGCACATTATTTTCGAGGTTCTGCA.................................................................2760.1710100000000
.......................................................GTGATGCCTAGCTTTGTTGCATGT..............................................................................................................................................................................................2460.1710000000010
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCA.................................................................2560.1710100000000
.................................................................................................................................................................................CTTGCACATTATTTTCGAGGTTCTG...................................................................2560.1710100000000
................................................................................................................................................................AGTTTCTCGTTGCGTTCCTTG........................................................................................21200.1530300000000
..............................................................................................................................GTCCTTTCGTGGTAGGTG.............................................................................................................................18200.1530300000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGA..............................................................................................................................21200.1530300000000
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCT....................................................................2270.1410100000000
..................................................TGTTGGTGATGCCTAGCTTTGTTGCATG...............................................................................................................................................................................................2870.1410100000000
..................................................................................................................TAACAATCTACAGTCCTTTCGTGGT..................................................................................................................................2570.1410100000000
..................................................................................................................TAACAATCTACAGTCCTTTCGTGG...................................................................................................................................2470.1410100000000
................................................TCTGTTGGTGATGCCTAGCTTTGTC....................................................................................................................................................................................................2580.1310000000010
................................................TCTGTTGGTGATGCCTAGCTTTGT.....................................................................................................................................................................................................2480.1310100000000
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCTGCAGC...............................................................2780.1310100000000
....................................................TTGGTGATGCCTAGCTTTGTTGCA.................................................................................................................................................................................................2490.1110100000000
.....................................................TGGTGATGCCTAGCTTTGTTGCAT................................................................................................................................................................................................2490.1110100000000
...........................................C----TCTGTTGGTGATGCCTAGCTTTG......................................................................................................................................................................................................24200.1020200000000
...................................................................................................................................................................TTCTCGTTGCGTTCCTTGCACA....................................................................................22200.1020200000000
.....................................................TGGTGATGCCTAGCTTTGTTGC..................................................................................................................................................................................................22100.1010100000000
...........................................................................................................................ACAGTCCTTTCGTGGTAGG...............................................................................................................................19200.1020200000000
...........................................C----TCTGTTGGTGATGCCTAGCTT........................................................................................................................................................................................................22200.1020200000000
.........................................................................................................................CTACAGTCCTTTCGTGGTAGG...............................................................................................................................21200.1020200000000
.......................................................GTGATGCCTAGCTTTGTTGCA.................................................................................................................................................................................................21130.0810100000000
.................................................................................................................................................................GTTTCTCGTTGCGTTCCTTGCA......................................................................................22200.0510100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTGG............................................................................................................................23200.0510100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGA...............................................................................................................................20200.0510000100000
............................................................................................................................................................................................TTTTCGAGGTTCTGCAGGA..............................................................19200.0510100000000
................................................................................................................................................................AGTTTCTCGTTGCGTTCCTTGCACAT...................................................................................26200.0510100000000
..................................................................................................................................................................TTTCTCGTTGCGTTCCTTG........................................................................................19200.0510100000000
...................................................................................................................................................................TTCTCGTTGCGTTCCTTGCACAT...................................................................................23200.0510100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGAAA.............................................................................................................................22200.0510100000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTGT............................................................................................................................23200.0510100000000
...........................................C----TCTGTTGGTGATGCCTAG...........................................................................................................................................................................................................19200.0510100000000
...........................................C----TCTGTTGGTGATGCCTAGCTC........................................................................................................................................................................................................22200.0511000000000
..........................................................................................................................TACAGTCCTTTCGTGGTAGGTGCG...........................................................................................................................24200.0510100000000
...................................................................................................................................................................TTCTCGTTGCGTTCCTTGCACATTA.................................................................................25200.0510100000000
droPer2
TTCCAGGGTTTCGATAGCCCCAGGTTCATCGCATTTTCTACATC----TCTGTTGGTGATGCCTAGCTTTGTTGCATGTGCAGCAGCCAGGAAATAACCTGTTAGTATTCCGACTAACAATCTGCAGTCCTTTCGTGGTAGGTGCAGTAGGTAGTGGCTAAGTTTCTCGTTGCGTTCCTTGCACATTATTTTCGAGGTTCTCCAGGTACCACCACCTGCTCCACCACCTGCTCCACCTCCTCCACCTGCTAT-CAG-------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................TAGGTAGTGGCTAAGTTTCTCGTTG.................................................................................................25205.4510901040005
...................................................................................................................................................TAGGTAGTGGCTAAGTTTCTCGT...................................................................................................23205.3510701043000
...................................................................................................................................................TAGGTAGTGGCTAAGTTTCTCGTT..................................................................................................24201.25250220003
.................................TTTTCTACATC----TCTGTTGGTGATGC...............................................................................................................................................................................................................2511.001010000
.....................................................................................................TTAGTATTCCGACTAACAATCTGCAG..............................................................................................................................................2611.001010000
.........................................................................................................TATTCCGACTAACAATCTGCAGTCCTTT........................................................................................................................................2811.001010000
......................................................................................................TAGTATTCCGACTAACAATCTGCAG..............................................................................................................................................2511.001010000
.............................................................................................................................................................................................TTTCGAGGTTCTCCAGGTACCACC........................................................2411.001010000
............................................................................................................TCCGACTAACAATCTGCAGTCCTTTCG......................................................................................................................................2711.001010000
...................................................................................................................................................TAGGTAGTGGCTAAGTTTCTCG....................................................................................................22200.55110110000
...................................................................................................................................................................................TGCACATTATTTTCGAGGTTCTCCAGG...............................................................2720.501001000
....................................................................................................................................................................................GCACATTATTTTCGAGGTTCTCCAGG...............................................................2620.501010000
...................................................................................................................................TTCGTGGTAGGTGCAGTAGGTAGTGG................................................................................................................26200.459080001
...............................................................................................................................TCCTTTCGTGGTAGGTGCAGTAGGTA....................................................................................................................26200.255050000
.........................................................................................................................................GTAGGTGCAGTAGGTAGTGG................................................................................................................20200.204000004
..........................................TC----TCTGTTGGTGATGCCTAGCTT........................................................................................................................................................................................................23200.153030000
...............................................................................................................................TCCTTTCGTGGTAGGTGCAG..........................................................................................................................20200.153020001
...................................................................................................................................TTCGTGGTAGGTGCAGTAGGTAG...................................................................................................................23200.153030000
...............................................................................................................................TCCTTTCGTGGTAGGTGCAGT.........................................................................................................................21200.153030000
..........................................................................................................................................TAGGTGCAGTAGGTAGTGGCTAAG...........................................................................................................24200.153030000
...............................................................TAGCTTTGTTGCATGTGCAGCAGC......................................................................................................................................................................................2470.141010000
..................................................................................................................................TTTCGTGGTAGGTGCAGTAGGTAG...................................................................................................................24200.102010001
...................................................................................................................................................TAGGTAGTGGCTAAGTTTCTCGTTGC................................................................................................26200.102002000
...................................................................................................................................TTCGTGGTAGGTGCAGTAGGTAGTG.................................................................................................................25200.102020000
..........................................................................................................................TGCAGTCCTTTCGTGGTAGGTGC............................................................................................................................23200.102002000
...................................................................................................................................................TAGGTAGTGGCTAAGTTTCTCGTTGCG...............................................................................................27200.102000002
...........................................C----TCTGTTGGTGATGCCTAGC..........................................................................................................................................................................................................20200.102020000
...............................................................................................................................TCCTTTCGTGGTAGGTGCAGTA........................................................................................................................22200.102020000
................................................................................................................................CCTTTCGTGGTAGGTGCAGTAGG......................................................................................................................23200.051010000
....................................................................................................................................TCGTGGTAGGTGCAGTAGGTAGTGGC...............................................................................................................26200.051010000
..................................................................................................................................TTTCGTGGTAGGTGCAGTA........................................................................................................................19200.051010000
...................................................................................................................................................................TTCTCGTTGCGTTCCTTGCACATT..................................................................................24200.051010000
..........................................................................................................................TGCAGTCCTTTCGTGGTAGGT..............................................................................................................................21200.051000001
..............................................................................................................................................................TAAGTTTCTCGTTGCGTTCCTTGCACAT...................................................................................28200.051010000
..............................................................................................................................................................TAAGTTTCTCGTTGCGTTCCTTGCACA....................................................................................27200.051010000
.........................................................................................................................................GTAGGTGCAGTAGGTAGTGGC...............................................................................................................21200.051000001
...................................................................................................................................TTCGTGGTAGGTGCAGTAGGT.....................................................................................................................21200.051010000
.....................................................................................................................................CGTGGTAGGTGCAGTAGGTAGTGG................................................................................................................24200.051010000
.......................................................................................................................................................TAGTGGCTAAGTTTCTCGTTG.................................................................................................21200.051010000
............................................................................................................................CAGTCCTTTCGTGGTAGGTGCAGTAGG......................................................................................................................27200.051010000
.......................................................................................................................................TGGTAGGTGCAGTAGGTAG...................................................................................................................19200.051000001
...............................................................................................................................TCCTTTCGTGGTAGGTGCAGTAGGT.....................................................................................................................25200.051000001
....................................................................................................................................................AGGTAGTGGCTAAGTTTCTCGTTGCG...............................................................................................26200.051010000
droKik1
CTCCAAGGTTTCGATTGCCTCGGATTCATCACATTTCCGGCATTTGGCGTTGTCGGTAATACCCAGCTTGACTGCATGTGCAGCAGACAGGCAGTGACCTGTAAGAATACCCACTAACATTCTGCAGTCCTTCCGCGGAAGATGCACCACGTAGTGGGTGAGTTTTTCGTTGTGTTCTTTGCACATGATTTTTGATATTCTGCAGGTTGCGGAAT-T------------------ACTCCTCCACCTGCTTT-TTGCGCTTGCGTCACGSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCAGTGTTTCGATTACCCAGGACTCACCACATTTCCTGCAATTGCTAATGTTGGTGGAGCGTAATTTGGTTGCGTGAAACACAGCCAGTCAATGATCTGTTAAAATCCTAATTAATAGTCTGCAAT---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTCAGGGACTCGCATGAACCATCGTCATCGCATTTTCTTCAACTGTCATTGTTGGTGATGCCTAGCTTGACTGCGTGCGTCTCGATTAGACAGTGACCTGTGAGAATTCCTACTAGTAATCTGCAGTCCTTCCGTGGTAGGTGCAGTACATAGCAAATATGTTTCTCGTTGCGGTCCTTGCACATGATTCCTGAGATTTTGAATGCTTTGGT----------------------TCTTCTCCACCGGTTTT-TAG-------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCGTGA--------------------------------------------------------------------------------------------------------------------------------------TGTGCCGTCTGTATTGGCCGAATTTCTCGCATCATTTCCTATAGTTCCTTTGCGAAGT-----------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTTCAGAGTTTCGATAGCCCCCAATTCATCGCAGTTTCTGCAGGTGCAGTTGTTAAGTTTTTCTA----------TTGTGATGCGACCAGACAGTGGCCTTTGAGGATTCCCACTAGCACTCTGCCGTCATTCCGTGGTAGGTGCAGAACACAGTGGCTGAGTTTATCGCTGCGCTCCTTACACATATTTTTTGAGATTCTGCAAATAATTGT----------------------ATTCTTCCACCTGTTATTTTG-------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTCCAGGGTTTCGATAGCCCCCGATTCATCACATTTCCTGCAGGCGCGGCTGTTGAGTATTCCGAGTGTGGTTGCGTGTGATGCGGCCAGACAGTGGCCTGTAAGGATTCCCACTAACAGTCTGCAGTCTTTCCGTGGTAGACGCCGTACATACTGGCTGAGTTTGTCGTTGCGCTCTTTGCAAATAGTTCTTGAGATTCGGCAGGTCTTGGT----------------------ATTCCTCCACCTGCTTT-TTG-------------SizeHit CountTotal NormTotal
No Reads
droYak3
CTCCAATGTTTCGATTGCCTCGAATTCATCACATTTCCGGCATTGGGCGTTGTCGGTATTGCCCAGTTTGACTGCGTGTGCCGCAGCTAGGCAGTGACCTGTCATAAATCCCACTAACAGTCTGCAGTCTTTCCTTGGAAGATGCAGCACGTAGTGACTGAGTTTTGCGTTGCGCTCTTTGCACATGATTTTTGAGATTTTGCAGGTGGCGGAAAT-------------------TCTCCTTCATCTACTTT-TGG-------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................TGATTTTTGAGATTTTGCAGGTGG............................................................24113.0013000000000013
...................................................................................................................................TCCTTGGAAGATGCAGCACGTAGTGAC...............................................................................................................2772.7119030000000016
.................................................................................................................................TTTCCTTGGAAGATGCAGCACGTAG...................................................................................................................25101.401409100040000
..............................................................................................TGACCTGTCATAAATCCCACTAACAGT....................................................................................................................................................2711.00101000000000
..............................................................................................TGACCTGTCATAAATCCCACTAACAGTC...................................................................................................................................................2811.00101000000000
...................................................................................................................................TCCTTGGAAGATGCAGCACGTAGTGACT..............................................................................................................2861.00600000000006
............................TCACATTTCCGGCATTGGGC.............................................................................................................................................................................................................................2011.00101000000000
..................................................................TTTGACTGCGTGTGCCGCAGCTAGGCAGT..............................................................................................................................................................................29100.60600000000006
.................................................................................................................................TTTCCTTGGAAGATGCAGCACGTAGT..................................................................................................................26100.40403100000000
.................................................................................................................................TTTCCTTGGAAGATGCAGCACGTA....................................................................................................................24100.30303000000000
...............................................................................................................................TCTTTCCTTGGAAGATGCAGCACGTAG...................................................................................................................27100.20202000000000
..................................................................................................................................TTCCTTGGAAGATGCAGCACGTAGT..................................................................................................................25100.20202000000000
.................................................................................................................................TTTCCTTGGAAGATGCAGCACGTAGTG.................................................................................................................27100.20202000000000
..................................................................TTTGACTGCGTGTGCCGCAGCTAGGCA................................................................................................................................................................................27120.17202000000000
..................................................................TTTGACTGCGTGTGCCGCAGCTAGGC.................................................................................................................................................................................26120.17202000000000
........................................................................TGCGTGTGCCGCAGCTAGGCAGTGAC...........................................................................................................................................................................2660.17101000000000
.......................................................................................................................................TGGAAGATGCAGCACGTAGTGACTGAG...........................................................................................................2760.17101000000000
....................................................................................................................................CCTTGGAAGATGCAGCACGTAGTGAC...............................................................................................................2670.14101000000000
..................................................................................................................................TTCCTTGGAAGATGCAGCACGTAGTGAC...............................................................................................................2870.14101000000000
..................................................................TTTGACTGCGTGTGCCGCAGCTAGG..................................................................................................................................................................................25160.13202000000000
...........................................................TGCCCAGTTTGACTGCGTGTGCCGC.........................................................................................................................................................................................25170.12202000000000
...................................................................................................................................TCCTTGGAAGATGCAGCACGTAGTG.................................................................................................................25100.10101000000000
....................................................................TGACTGCGTGTGCCGCAGCTAGGCAGT..............................................................................................................................................................................27110.09100100000000
...............................................................................................................................TCTTTCCTTGGAAGATGCAGCACG......................................................................................................................24120.08101000000000
....................................................................TGACTGCGTGTGCCGCAGCTAGGCA................................................................................................................................................................................25130.08101000000000
....................................................................TGACTGCGTGTGCCGCAGCTAGGC.................................................................................................................................................................................24130.08101000000000
.....................................................................GACTGCGTGTGCCGCAGCTAGGCA................................................................................................................................................................................24140.07101000000000
..........................................................................................................................TGCAGTCTTTCCTTGGAAGATGCAGC.........................................................................................................................26140.07100100000000
...........................................................TGCCCAGTTTGACTGCGTGTGCCGCAGC......................................................................................................................................................................................28170.06100100000000
...........................................................TGCCCAGTTTGACTGCGTGTGCCGCA........................................................................................................................................................................................26170.06101000000000
..............................................................CCAGTTTGACTGCGTGTGCCGCAGC......................................................................................................................................................................................25180.06101000000000
.............................................................CCCAGTTTGACTGCGTGTGCCGCAGC......................................................................................................................................................................................26180.06101000000000
...............................................................CAGTTTGACTGCGTGTGCCGCAGC......................................................................................................................................................................................24180.06101000000000

Generated: 05/18/2015 at 02:16 AM