ID:

dps_1956

Coordinate:

Unknown_group_31:15668-15722 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.6 -16.6

Flybase annnotation

CDS [Dpse\GA23986-cds]; exon [dpse_GLEANR_13520:2]; CDS [Dpse\GA23986-cds]; exon [dpse_GLEANR_13520:1]; intron [Dpse\GA23986-in]

No Repeatable elements found

mature
  1. dps_1956  Unknown_group_31:15686-15709 +
  2. Unknown_singleton_1273:5388-5411 +
  3. Unknown_singleton_169:111-134 +
  4. Unknown_singleton_2937:193-216 +
star

Sense Strand Reads

##################################################-------------------------------------------------------##################################################
CGGCCCGCAAACGGGACGCGCAGGAGGAGGCGACAGCCCCGGAAAGAAGGGTGAATCCCGACTGGCAGCCGCTGGACCACGCACCAATAAAGTGGCTATCGCCAGTTCCCACCGACCCCAACGCACCAAACCCGAAATCGACGAGCTGCACGACC
**************************************************...........((((((((((((.................)))))))...)))))**************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902010
ovaries
M059
embryo
GSM343916
embryo
V112
male body
......................................................................................................................................AAATCGACGAGCTGCACGACC 21 0 5 4.00 20 20 0 0 0 0
......................................................................................................................................AAATCGACGAGCTGCACGAC. 20 0 5 2.80 14 12 2 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGA.............................................................................................. 23 0 12 2.75 33 33 0 0 0 0
.........................................................................................................TTCCCACCGACCCCAACGCACC............................ 22 0 4 2.25 9 9 0 0 0 0
.........................................................................................................TTCCCACCGACCCCAACGCAC............................. 21 0 4 1.75 7 7 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCG............................................................................................... 22 0 12 1.50 18 17 1 0 0 0
.........................................................................................................TTCCCACCGACCCCAACGCACCAAACC....................... 27 0 2 1.00 2 2 0 0 0 0
.....................................CCCGGAAAGAAGGGTGAATCCCGACT............................................................................................ 26 0 4 1.00 4 2 2 0 0 0
......................................................................................................................................GAATCGACGAGCTGCACGACC 21 1 12 0.83 10 10 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCC................................................................................................ 21 0 12 0.83 10 9 0 1 0 0
....................................................................CCGCTGGACCACGCACCAATAAAG............................................................... 24 0 4 0.75 3 3 0 0 0 0
..........................GAGGCGACAGCCCCGGAAAGGAG.......................................................................................................... 23 1 4 0.75 3 3 0 0 0 0
......................................................................................................................................GAATCGACGAGCTGCACGAC. 20 1 12 0.75 9 8 0 1 0 0
...................................................................GCCGCTGGACCACGCACCAATA.................................................................. 22 0 3 0.67 2 2 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGACT............................................................................................ 25 0 5 0.60 3 1 1 1 0 0
...................................................................................................................................CCGGAATCGACGAGCTGCACGACC 24 1 12 0.58 7 4 3 0 0 0
..........................GAGGCGACAGCCCCGGAAAGAAG.......................................................................................................... 23 0 4 0.50 2 2 0 0 0 0
.....................................................................CGCTGGACCACGCACCAATAAAGTGG............................................................ 26 0 4 0.50 2 2 0 0 0 0
................................................................................................TATCGCCAGTTCCCACCGACCCCA................................... 24 0 4 0.50 2 2 0 0 0 0
..............................................................................................................................CAAACCCGAAATCGACGAGCTG....... 22 0 2 0.50 1 1 0 0 0 0
..........................GAGGCGACAGCCCCGGAAAGAAGG......................................................................................................... 24 0 4 0.50 2 2 0 0 0 0
...................................................................GCCGCTGGACCACGCACCAATAAAG............................................................... 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................TTCCCACCGACCCCAACGCACCAA.......................... 24 0 2 0.50 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCC................................................................................................. 20 0 12 0.42 5 3 0 2 0 0
......................................................................................................................................GAATCGACGAGCTGCACGA.. 19 1 12 0.42 5 5 0 0 0 0
.......................................................................................................................................AATCGACGAGCTGCACGAC. 19 0 5 0.40 2 2 0 0 0 0
.......................................CGGAAAGAAGGGTGAATCCCGA.............................................................................................. 22 0 12 0.33 4 4 0 0 0 0
.................................................................................CACCAATAAAGTGGCTATCGCCAG.................................................. 24 0 3 0.33 1 1 0 0 0 0
.............................................GAAGGGTGAATCCCGACTGGCAG....................................................................................... 23 0 3 0.33 1 1 0 0 0 0
......................................................ATCCCGACTGGCAGCCGCTG................................................................................. 20 0 3 0.33 1 1 0 0 0 0
........................................................CCCGACTGGCAGCCGCTGG................................................................................ 19 0 3 0.33 1 1 0 0 0 0
....................................................GAATCCCGACTGGCAGCCGT................................................................................... 20 1 3 0.33 1 1 0 0 0 0
.......................................................TCCCGACTGGCAGCCGCTGGAC.............................................................................. 22 0 3 0.33 1 1 0 0 0 0
............................................................................................TGGCTATCGCCAGTTCCCACCGACC...................................... 25 0 7 0.29 2 1 0 1 0 0
.....................................................................CGCTGGACCACGCACCAATAAAG............................................................... 23 0 4 0.25 1 1 0 0 0 0
.....................................................................CACTGGACCACGCACCAATAAAGT.............................................................. 24 1 4 0.25 1 1 0 0 0 0
.....................................................................................................CCAGTTCCCACCGACCCCAACGCA.............................. 24 0 4 0.25 1 1 0 0 0 0
.........................GGAGGCGACAGCCCCGGAAAGGA........................................................................................................... 23 1 4 0.25 1 1 0 0 0 0
.....................................................................CGCTGGACCACGCACCAATAAAGT.............................................................. 24 0 4 0.25 1 1 0 0 0 0
..........................GAGGCGACAGCCCCGGAAACA............................................................................................................ 21 1 4 0.25 1 1 0 0 0 0
.........................GGAGGCGACAGCCCCGGAAAG............................................................................................................. 21 0 4 0.25 1 1 0 0 0 0
....................................CCCCGGAAAGGAGGGTGAATCCCGAC............................................................................................. 26 1 4 0.25 1 1 0 0 0 0
...........................AGGCGACAGCCCCGGAAAGGAGGGT....................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
....................................CCCCGGAAAGAAGGGTGAATCCCGAC............................................................................................. 26 0 4 0.25 1 1 0 0 0 0
........................................GGAAAGAAGGGTGAATCCCGA.............................................................................................. 21 0 12 0.25 3 3 0 0 0 0
.......................................................................................................................................AATCGACGAGCTGCACGACC 20 0 5 0.20 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGACTG........................................................................................... 26 0 5 0.20 1 1 0 0 0 0
...................................................................................................................................CCGAAATCGACGAGCCGCACGACC 24 1 5 0.20 1 1 0 0 0 0
................................................................................................................................AACCCGAAATCGACGAGCTGC...... 21 0 5 0.20 1 1 0 0 0 0
......................................CCGGAAAGGAGGGTGAATCCCGACT............................................................................................ 25 1 5 0.20 1 1 0 0 0 0
......................................................................................................................................AAATCGACGAGCTGCACGACA 21 1 5 0.20 1 1 0 0 0 0
......................................................................................................................................AAATCGACGAGCCGCACGAC. 20 1 5 0.20 1 1 0 0 0 0
...................................................................................................................................CCGAAATCGACGAGCTGCACGAC. 23 0 5 0.20 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGAC............................................................................................. 24 0 5 0.20 1 1 0 0 0 0
.................GCGCAGGAGGAGGCGACAGCA..................................................................................................................... 21 1 6 0.17 1 1 0 0 0 0
............GGGACGCGCAGGAGGAGGCGACA........................................................................................................................ 23 0 6 0.17 1 1 0 0 0 0
...................................................................................................................................CCGGAATCGACGAGCTGCACGAC. 23 1 12 0.17 2 2 0 0 0 0
......................................CCGGAAAGAAGGGTGAAT................................................................................................... 18 0 12 0.17 2 2 0 0 0 0
............GGGACGCGCAGGAGGAGGCGAC......................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0
...........................................................................................GTGGCTATCGCCAGTTCCCAC........................................... 21 0 6 0.17 1 1 0 0 0 0
......................................CCGGAAAGGAGGGTGAATCCCGA.............................................................................................. 23 1 12 0.17 2 2 0 0 0 0
......................................CCGGAAAGAAGGGTGAATC.................................................................................................. 19 0 12 0.17 2 1 0 1 0 0
...................................................................GCCGCTGGACCCCGCACCAA.................................................................... 20 1 13 0.15 2 2 0 0 0 0
...................................................................GCCGCTGGACCCCGCACCAATT.................................................................. 22 2 13 0.15 2 2 0 0 0 0
............................................................................................TGGCTATCGCCAGTTCCCACCGAC....................................... 24 0 7 0.14 1 0 0 1 0 0
............................................................................................TGGCTATCGCCAGTTCCCACC.......................................... 21 0 7 0.14 1 1 0 0 0 0
............................................................................................TGGCTATCGCCAGTTCCCACCGAA....................................... 24 1 7 0.14 1 1 0 0 0 0
............................................................................................TGGCTATCGCCAGTTCCCACCGACA...................................... 25 1 7 0.14 1 1 0 0 0 0
........................................................................................AAAGTGGCTAGCTCCCGTT................................................ 19 3 8 0.13 1 0 0 0 1 0
................................................................................................TATCGCCAGTTCCCACCGACC...................................... 21 0 8 0.13 1 1 0 0 0 0
............GGGACGCGCAGGAGGAGG............................................................................................................................. 18 0 20 0.10 2 2 0 0 0 0
.....................................CCCGGAAAGAAGGGTGAATCCC................................................................................................ 22 0 11 0.09 1 1 0 0 0 0
..........................GAGGCGACAGCCCCGGAAAGGAA.......................................................................................................... 23 2 11 0.09 1 1 0 0 0 0
.................................CAGCCCCGGAAAGGAGGGTGAATCCCGA.............................................................................................. 28 1 11 0.09 1 0 0 0 0 1
.....................................CCCGGAAAGAAGGGTGAATCCCG............................................................................................... 23 0 11 0.09 1 1 0 0 0 0
...................................................................................................................................CCGGAATCGACGAGCCGCACGACC 24 2 12 0.08 1 1 0 0 0 0
........................................GGAAAGAAGGGTGAATCC................................................................................................. 18 0 12 0.08 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGAAA............................................................................................ 25 2 12 0.08 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGT.............................................................................................. 23 1 12 0.08 1 1 0 0 0 0
..................................................................................................................................CCTGGAATCGACGAGCTGCACGAC. 24 2 12 0.08 1 1 0 0 0 0
..................................................................................................................................CCCGGAATCGACGAGCTGCACGAC. 24 1 12 0.08 1 0 0 1 0 0
...................................................................................................................................CCGGAATCGACGAGCTGTACGACC 24 2 12 0.08 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCGTAA............................................................................................ 25 3 12 0.08 1 1 0 0 0 0
......................................CCGGAAAGGAGGGTGAATCCCG............................................................................................... 22 1 12 0.08 1 1 0 0 0 0
......................................CCGGAAAGAAGGGTGAATCCCC............................................................................................... 22 1 12 0.08 1 1 0 0 0 0
.......................................CGGAAAGAAGGGTGAATCCCG............................................................................................... 21 0 12 0.08 1 1 0 0 0 0
......................................................................................................................................GAATCGACGAGCTGCACGACA 21 2 12 0.08 1 1 0 0 0 0
...................................................................GCCGCTGGACCCCGCACCAAT................................................................... 21 1 13 0.08 1 1 0 0 0 0
...................................................................GCCGCTGGACCACGCACCAAT................................................................... 21 0 13 0.08 1 1 0 0 0 0
...................................................................GCCGCTGGACCCCGCACCA..................................................................... 19 1 13 0.08 1 1 0 0 0 0
.........................................................................................................TTCCCACCGACCCCAACGCCCC............................ 22 1 13 0.08 1 1 0 0 0 0
..............................................................TGGCAGCCGCTGGACCACGCACCAA.................................................................... 25 0 13 0.08 1 1 0 0 0 0
......................................................................................................................................GAATCGACGAGCTGCACG... 18 1 15 0.07 1 1 0 0 0 0
...................................................................GCCGCTGGACCCCGCACA...................................................................... 18 2 17 0.06 1 1 0 0 0 0
............GGGACGCGCAGGAGGAGGCG........................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
............GGGACGCGCAGGAGGAGGCGT.......................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GCCGGGCGTTTGCCCTGCGCGTCCTCCTCCGCTGTCGGGGCCTTTCTTCCCACTTAGGGCTGACCGTCGGCGACCTGGTGCGTGGTTATTTCACCGATAGCGGTCAAGGGTGGCTGGGGTTGCGTGGTTTGGGCTTTAGCTGCTCGACGTGCTGG
**************************************************...........((((((((((((.................)))))))...)))))**************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
M059
embryo
GSM343916
embryo
SRR902010
ovaries
V112
male body
M062
head
GSM444067
head
SRR902011
testis
..........................................................................................TCACCGATAGCGGTCAAGGGTGGCT........................................ 25 0 6 254.50 1527 1391 68 47 8 10 3 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGGCT........................................ 24 0 6 57.83 347 265 60 16 5 1 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGGTGGCT........................................ 26 0 6 48.83 293 265 13 14 0 1 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGGC......................................... 24 0 6 21.50 129 129 0 0 0 0 0 0 0
..............................................................................................CGATAGCGGTCAAGGGTGGCT........................................ 21 0 7 18.86 132 120 4 0 5 1 1 0 1
...............................................................................................GATAGCGGTCAAGGGTGGCT........................................ 20 0 7 16.29 114 105 1 1 2 4 0 0 1
.............................................................................................CCGATAGCGGTCAAGGGTGGCT........................................ 22 0 7 14.71 103 86 10 4 1 2 0 0 0
.........................................................................................ATCACCGATAGCGGTCAAGGGTGGCT........................................ 26 1 6 11.50 69 63 6 0 0 0 0 0 0
............................................................................................ACCGATAGCGGTCAAGGGTGGCT........................................ 23 0 7 11.14 78 74 2 1 1 0 0 0 0
.......................................................AGGGCTGACCGTCGGCGACCTG.............................................................................. 22 0 3 11.00 33 31 0 0 0 2 0 0 0
.....................................................TTAGGGCTGACCGTCGGCGACCTG.............................................................................. 24 0 3 10.33 31 29 0 1 0 1 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 23 0 5 5.20 26 26 0 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGGTGGC......................................... 25 0 6 4.50 27 27 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGGC......................................... 23 0 6 4.33 26 26 0 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 25 1 4 4.00 16 16 0 0 0 0 0 0 0
..........................................................................................ACACCGATAGCGGTCAAGGGTGGCT........................................ 25 1 6 4.00 24 24 0 0 0 0 0 0 0
......................................................TAGGGCTGACCGTCGGCGACCTG.............................................................................. 23 0 3 3.67 11 10 0 1 0 0 0 0 0
........................................................GGGCTGACCGTCGGCGACCTG.............................................................................. 21 0 3 3.33 10 10 0 0 0 0 0 0 0
..........................................................................................CCACCGATAGCGGTCAAGGGTGGCT........................................ 25 1 6 3.17 19 2 16 0 0 0 0 0 1
..............................................................................................AGATAGCGGTCAAGGGTGGCT........................................ 21 1 7 2.57 18 16 0 0 2 0 0 0 0
................................................................................................ATAGCGGTCAAGGGTGGCT........................................ 19 0 8 2.25 18 18 0 0 0 0 0 0 0
.................CGCGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 26 0 5 2.20 11 11 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGGCTGG...................................... 27 0 6 2.17 13 13 0 0 0 0 0 0 0
........................................................................................................................TGCGTGGTTTGGGCTTTAGCTGCT........... 24 0 2 2.00 4 3 0 0 0 1 0 0 0
........................TCCTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 24 1 4 2.00 8 8 0 0 0 0 0 0 0
...................................CGGGGCCTTTCTTCCCACTTAGGGCT.............................................................................................. 26 0 11 2.00 22 17 5 0 0 0 0 0 0
...................CGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 24 0 5 2.00 10 10 0 0 0 0 0 0 0
..........................CTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 22 0 4 2.00 8 8 0 0 0 0 0 0 0
...................................................ACTTAGGGCTGACCGTCGGCGACCTG.............................................................................. 26 0 3 2.00 6 5 0 0 0 1 0 0 0
.........................CCTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 23 1 4 1.75 7 6 1 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 25 0 4 1.75 7 6 0 0 1 0 0 0 0
.........................CCTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 23 0 4 1.75 7 7 0 0 0 0 0 0 0
...............................................................................................GATAGCGGTCAAGGGTGGC......................................... 19 0 7 1.71 12 12 0 0 0 0 0 0 0
.........................................................GGCTGACCGTCGGCGACCTG.............................................................................. 20 0 3 1.67 5 5 0 0 0 0 0 0 0
.........................................................GGCTGACCGTCGGCGACCTGGT............................................................................ 22 0 3 1.67 5 3 0 0 2 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGG.......................................... 23 0 6 1.67 10 8 0 2 0 0 0 0 0
..........................................................................................................................CGTGGTTTGGGCTTTAGCTGCT........... 22 0 2 1.50 3 2 1 0 0 0 0 0 0
.................................................................................................TAGCGGTCAAGGGTGGCT........................................ 18 0 8 1.50 12 12 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 26 0 4 1.50 6 6 0 0 0 0 0 0 0
......................TCTCCTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 26 2 4 1.50 6 6 0 0 0 0 0 0 0
...........................................................................................AACCGATAGCGGTCAAGGGTGGCT........................................ 24 1 8 1.38 11 10 0 1 0 0 0 0 0
....................................................CTTAGGGCTGACCGTCGGCGACCTG.............................................................................. 25 0 3 1.33 4 4 0 0 0 0 0 0 0
.....................................................ATAGGGCTGACCGTCGGCGACCTG.............................................................................. 24 1 3 1.33 4 4 0 0 0 0 0 0 0
...........................TCCGCTGTCGGGGCCTTTCTT........................................................................................................... 21 0 4 1.25 5 5 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 26 1 4 1.25 5 5 0 0 0 0 0 0 0
..........................CTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 22 1 4 1.25 5 4 0 0 1 0 0 0 0
.....................................GGGCCTTTCTTCCCACTTAGGGCT.............................................................................................. 24 0 11 1.18 13 13 0 0 0 0 0 0 0
............................................................................................TCCGATAGCGGTCAAGGGTGGCT........................................ 23 1 7 1.14 8 5 1 2 0 0 0 0 0
..................................................................................................................................GGGCTTTAGCTGCTCGACGTGCT.. 23 0 5 1.00 5 4 0 0 1 0 0 0 0
......................................................TAGGGCTGACCGTCGGCGACCT............................................................................... 22 0 3 1.00 3 3 0 0 0 0 0 0 0
........................TCCTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 24 0 4 1.00 4 4 0 0 0 0 0 0 0
.........................................................................................................................GCGTGGTTTGGGCTTTAGCTGCT........... 23 0 2 1.00 2 2 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGGCTG....................................... 26 0 6 1.00 6 6 0 0 0 0 0 0 0
.................................................................................................................................TGGGCTTTAGCTGCTCGACGTGCT.. 24 0 5 1.00 5 3 0 0 0 2 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGT............................................ 21 0 6 1.00 6 6 0 0 0 0 0 0 0
.............................CGCTGTCGGGGCCTTTCCT........................................................................................................... 19 1 4 1.00 4 4 0 0 0 0 0 0 0
.................................................................................................................................TGGGCTTTAGCTGCTCGACGTGC... 23 0 5 1.00 5 3 0 0 0 1 0 1 0
.............................................................................................CCGATAGCGGTCAAGGGTGGC......................................... 21 0 7 1.00 7 7 0 0 0 0 0 0 0
............................................................................................ACCGATAGCGGTCAAGGGTGGC......................................... 22 0 7 0.86 6 6 0 0 0 0 0 0 0
.........................................................................................ATCACCGATAGCGGTCAAGGGTGGC......................................... 25 1 6 0.83 5 5 0 0 0 0 0 0 0
..........................................................................................TCCCCGATAGCGGTCAAGGGTGGCT........................................ 25 1 6 0.83 5 0 0 5 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGGGT........................................ 25 1 6 0.83 5 0 5 0 0 0 0 0 0
......................................GGCCTTTCTTCCCACTTAGGGCT.............................................................................................. 23 0 12 0.83 10 10 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTCGGGGCCT................................................................................................................ 21 0 5 0.80 4 4 0 0 0 0 0 0 0
..................GCGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 25 0 5 0.80 4 4 0 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTCTTC.......................................................................................................... 26 0 4 0.75 3 3 0 0 0 0 0 0 0
................................................................................................TTAGCGGTCAAGGGTGGCT........................................ 19 1 8 0.75 6 6 0 0 0 0 0 0 0
..........................CTCCGCTGTCGGGGCCTTTCT............................................................................................................ 21 0 4 0.75 3 3 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTCGGGGCCTTTCT............................................................................................................ 25 0 4 0.75 3 3 0 0 0 0 0 0 0
...........................TCCGCTGTCGGGGCCTTTCCT........................................................................................................... 21 1 4 0.75 3 3 0 0 0 0 0 0 0
..............................................................................................CGATAGCGGTCAAGGGTGGC......................................... 20 0 7 0.71 5 5 0 0 0 0 0 0 0
..............................................................................................TGATAGCGGTCAAGGGTGGCT........................................ 21 1 7 0.71 5 4 0 1 0 0 0 0 0
.............................................................................................AAGATAGCGGTCAAGGGTGGCT........................................ 22 2 7 0.71 5 5 0 0 0 0 0 0 0
..................................................CACTTAGGGCTGACCGTCGGCGACCTG.............................................................................. 27 0 3 0.67 2 2 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTG........................................... 21 0 6 0.67 4 3 1 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGTGTGGCT........................................ 25 1 6 0.67 4 3 1 0 0 0 0 0 0
.................................................CCACTTAGGGCTGACCGTCGGCGACCTG.............................................................................. 28 0 3 0.67 2 2 0 0 0 0 0 0 0
...................................................................CGGCGACCTGGTGCGTGGTTAT.................................................................. 22 0 3 0.67 2 2 0 0 0 0 0 0 0
..........................................................GCTGACCGTCGGCGACCTG.............................................................................. 19 0 3 0.67 2 2 0 0 0 0 0 0 0
...........................................................CTGACCGTCGGCGACCTGGT............................................................................ 20 0 3 0.67 2 2 0 0 0 0 0 0 0
........................................................................................TTTCACCGATAGCGGTCAAGGGTGGCT........................................ 27 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................GGGGCCTTTCTTCCCACTTAGGGCT.............................................................................................. 25 0 11 0.64 7 7 0 0 0 0 0 0 0
...............................................................................................AATAGCGGTCAAGGGTGGCT........................................ 20 1 8 0.63 5 5 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCC................................................................................................................. 22 0 5 0.60 3 3 0 0 0 0 0 0 0
....................GTTCTCCTCCGCTGTCGGGGCCT................................................................................................................ 23 1 5 0.60 3 3 0 0 0 0 0 0 0
......................................................................CGACCTGGTGCGTGGTTAT.................................................................. 19 0 5 0.60 3 2 1 0 0 0 0 0 0
............................................................................................AACGATAGCGGTCAAGGGTGGCT........................................ 23 1 7 0.57 4 4 0 0 0 0 0 0 0
............................................................................................AAAGATAGCGGTCAAGGGTGGCT........................................ 23 2 7 0.57 4 4 0 0 0 0 0 0 0
............................................................................................CCCGATAGCGGTCAAGGGTGGCT........................................ 23 1 7 0.57 4 1 0 2 0 1 0 0 0
............................................................................................AAAAATAGCGGTCAAGGGTGGCT........................................ 23 3 9 0.56 5 5 0 0 0 0 0 0 0
..............................................................................................AAATAGCGGTCAAGGGTGGCT........................................ 21 2 9 0.56 5 4 0 1 0 0 0 0 0
..........................................................................................TCGCCGATAGCGGTCAAGGGTGGCT........................................ 25 1 6 0.50 3 2 0 1 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGGGT........................................ 24 1 6 0.50 3 0 3 0 0 0 0 0 0
.........................CCTCCGCTGTCGGGGCCTTTCC............................................................................................................ 22 1 4 0.50 2 2 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCTT............................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0 0 0
............................CCGCTGTCGGGGCCTTTCCTCCCACTT.................................................................................................... 27 1 4 0.50 2 2 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCTTTCCT........................................................................................................... 28 1 4 0.50 2 2 0 0 0 0 0 0 0
.......................................................................................................................TTGCGTGGTTTGGGCTTTAGCTGCT........... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................TGTGGTTTGGGCTTTAGCTGCT........... 22 1 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................CGATAGCGGTCAAGGGTGGCTGGG..................................... 24 0 4 0.50 2 0 0 0 2 0 0 0 0
...................CGTCCTCCTCCGCTGTCGGGGCCTT............................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0
.............................................................................................................................GGTTTGGGCTTTAGCTGCT........... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
........................TCCTCCGCTGTCGGGGCCTTTCT............................................................................................................ 23 0 4 0.50 2 2 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTG........................................... 22 0 6 0.50 3 3 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTTGCT........................................ 24 1 6 0.50 3 0 3 0 0 0 0 0 0
.........................CCTCCGCTGTCGGGGCCTTTCTTC.......................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0 0 0
............................................................................................................................TGGTTTGGGCTTTAGCTGCT........... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................GTGGTTTGGGCTTTAGCTGCT........... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTC............................................................................................................. 23 0 4 0.50 2 2 0 0 0 0 0 0 0
............................CCGCTGTCGGGGCCTTTCCTCCCACT..................................................................................................... 26 1 4 0.50 2 1 0 0 0 0 1 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTGTT........................................................................................................... 25 1 4 0.50 2 2 0 0 0 0 0 0 0
...........................................................................................................................GTGGTTTGGGCTTTAGCTGC............ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................GGGGTTGCGTGGTTTGGGCT.................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................AAACCGATAGCGGTCAAGGGTGGCT........................................ 25 2 8 0.50 4 4 0 0 0 0 0 0 0
.................................................................................................................................TGGGCCTTAGCTGCTCGACGTGCT.. 24 1 12 0.50 6 4 0 2 0 0 0 0 0
............................................................................................................................TGGTTTGGGCTTTAGCTG............. 18 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................CACCGATATCGGTCAAGGGTGGCT........................................ 24 1 6 0.50 3 3 0 0 0 0 0 0 0
........................TCCTCCGCTGTTGGGGCCTTTCTT........................................................................................................... 24 1 4 0.50 2 2 0 0 0 0 0 0 0
..............................................................................................CGATAGCGGTCAAGGGTGGCTG....................................... 22 0 7 0.43 3 3 0 0 0 0 0 0 0
.............................................................................................ACGATAGCGGTCAAGGGTGGCT........................................ 22 1 7 0.43 3 3 0 0 0 0 0 0 0
...................CGTTCTCCTCCGCTGTCGGGGCCT................................................................................................................ 24 1 5 0.40 2 2 0 0 0 0 0 0 0
.................................................................................................................................TGGGCTTTAGCTGCTCGGCGTGCT.. 24 1 5 0.40 2 2 0 0 0 0 0 0 0
.................TGCGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 26 1 5 0.40 2 2 0 0 0 0 0 0 0
.................CGCGTTCTCCTCCGCTGTCGGGGCCT................................................................................................................ 26 1 5 0.40 2 2 0 0 0 0 0 0 0
...........................................................................................AACCGATAGCGGTCAAGGGTGGC......................................... 23 1 8 0.38 3 3 0 0 0 0 0 0 0
.................................GTCGGGGCCTTTCTTCCCACTT.................................................................................................... 22 0 11 0.36 4 3 0 0 1 0 0 0 0
.....................................................TTAGGGCTGACCGTCGGCGACCTGGT............................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................TGGCTGACCGTCGGCGACCTG.............................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................AGGGCTGACCGTCGGCGACCT............................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAACGGTCAAGGGTGGCT........................................ 25 1 6 0.33 2 2 0 0 0 0 0 0 0
......................................................TAGGGCCGACCGTCGGCGACCTGGT............................................................................ 25 1 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................CTGACCGTCGGCGACCTG.............................................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................TTAGGGCTGACCGTCGGCGATCTG.............................................................................. 24 1 3 0.33 1 0 1 0 0 0 0 0 0
........................................................GGGCTGACCGTCGGCGACCTGG............................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................CCCACTTAGGGCTGACCGTCGGCGACCT............................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................TTGGCTGACCGTCGGCGACCTG.............................................................................. 22 2 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................GGCTGACCGTCGGCGATCTGGT............................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGGCTG....................................... 25 0 6 0.33 2 2 0 0 0 0 0 0 0
.....................................................AAAGGGCTGACCGTCGGCGACCTG.............................................................................. 24 2 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGGTG........................................... 23 0 6 0.33 2 2 0 0 0 0 0 0 0
........................................................GGGCTGACCGTCGGCGACCCG.............................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGTTCAAGGGTGGCT........................................ 25 1 6 0.33 2 2 0 0 0 0 0 0 0
....................................................TTTAGGGCTGACCGTCGGCGACCT............................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0
......................................................TAGGGCTGACCGTCGGCGACCTGGTAAC......................................................................... 28 3 3 0.33 1 1 0 0 0 0 0 0 0
.................................................CCACTTAGGGCTGACCGTCGGCGACCT............................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................GTCGGCGACCTGGTGCGTGGTTATT................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGGTAGCT........................................ 26 1 6 0.33 2 1 1 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGGTGG.......................................... 24 0 6 0.33 2 2 0 0 0 0 0 0 0
........................................................GGGCTGACCGTCGGCGACCTGGT............................................................................ 23 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGCGGCT........................................ 25 1 6 0.33 2 1 0 0 0 0 0 1 0
............................................................TGACCGTCGGCGACCTGGT............................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................TGACCGTCGGCGACCTGGTGCGTGGT..................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................TCGGCGACCTGGTGCGTGGTTAT.................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGGCTC....................................... 25 1 6 0.33 2 2 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGCCT........................................ 24 1 6 0.33 2 1 1 0 0 0 0 0 0
.............................................................GACCGTCGGCGACCTGGT............................................................................ 18 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................AACACCGATAGCGGTCAAGGGTGGCT........................................ 26 2 6 0.33 2 2 0 0 0 0 0 0 0
................................................CCCACTTAGGGCTGACCGTCGGCGACCGG.............................................................................. 29 1 3 0.33 1 0 0 0 0 0 1 0 0
.........................................................................................TTCCCCGATAGCGGTCAAGGGTGGCT........................................ 26 1 6 0.33 2 0 0 2 0 0 0 0 0
.............................................................GACCGTCGGCGACCTGGTGCGT........................................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................TTAGGGCTGACCGTCGGCGACC................................................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGTTGGCT........................................ 25 1 6 0.33 2 1 1 0 0 0 0 0 0
.......................................................AAGGCTGACCGTCGGCGACCTG.............................................................................. 22 1 3 0.33 1 0 0 1 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGGTGGCTG....................................... 27 0 6 0.33 2 2 0 0 0 0 0 0 0
..........................................................GCTGACCGTCGGCGACCTGGT............................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................TTCGGCGACCTGGTGCGTGGTTAT.................................................................. 24 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................TTAGGGCTGACCGTCGGCGACCT............................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................TCGGGCTGATCGTCGTCGACCTGGT............................................................................ 25 3 3 0.33 1 0 0 0 0 0 0 1 0
..........................................................GCTGACCGCCGGCGACCTGGT............................................................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................GTCGGCGACCTGGGGCGTGGT..................................................................... 21 1 13 0.31 4 3 0 0 0 1 0 0 0
...................TGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 24 1 7 0.29 2 2 0 0 0 0 0 0 0
..............................................................................................AGATAGCGGTCAAGGGTGGC......................................... 20 1 7 0.29 2 2 0 0 0 0 0 0 0
.............................................................................................ATGATAGCGGTCAAGGGTGGCT........................................ 22 2 7 0.29 2 2 0 0 0 0 0 0 0
..........................................................................................TCACGGATAGCGGTCAAGGGTGGCT........................................ 25 1 7 0.29 2 0 0 2 0 0 0 0 0
.............................................................................................CCGATAGCGGTCAAGGGTGGCTG....................................... 23 0 7 0.29 2 2 0 0 0 0 0 0 0
............................................................................................ACCGATAGCGGTCAAGGGTGG.......................................... 21 0 7 0.29 2 2 0 0 0 0 0 0 0
....................................GGGGCCTTTCTTCCCACTT.................................................................................................... 19 0 11 0.27 3 3 0 0 0 0 0 0 0
....................................................................GGCGACCTGGGGCGTGGT..................................................................... 18 1 15 0.27 4 3 1 0 0 0 0 0 0
..................................................................TCGGCGACAGGGTGCGTGGT..................................................................... 20 2 15 0.27 4 0 0 0 0 0 4 0 0
.........................CCTCCGCTGTCGGGGCCTTTCT............................................................................................................ 22 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................CGCTGTCGGGGCCTTTCTT........................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCTTTCT............................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
......................CCTCCCCCGCTGTCGGGGCCTTTCC............................................................................................................ 25 2 4 0.25 1 1 0 0 0 0 0 0 0
.........................AATCCGCTGTCGGGGCCTTTCTTC.......................................................................................................... 24 2 4 0.25 1 1 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTCGGGGCCTT............................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................CTCCGCTGTTGGGGCCTTTCTT........................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCTTT.............................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0 0
............................CCGCTGTCGGGGCCTTTCCT........................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTTGGGGCCTTTCTT........................................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0
.................CGCGTCCTCCTCCGCTGTCGGGGCCTT............................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0
...........................TCCGCTGTCGGGGCCTTTCCTCCCA....................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................................................................................GGGCCTTAGCTGCTCGACGTGCT.. 23 1 12 0.25 3 3 0 0 0 0 0 0 0
....................................................................GGCGACCTGGTGCGTGGTTATTTCACC............................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
...........................TCCGCTGTCGGGGCCTTTCT............................................................................................................ 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................CGCTGTCGGGGCCTTTCCTCCCACT..................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................TCGGCGACTGGGTGCGTGGTC.................................................................... 21 3 16 0.25 4 0 0 0 0 0 0 4 0
............................CCGCTGTCGGGGCCTTTCTTCCCACTT.................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................GGGCCTTTCCTCCCACTTAGGGCTG............................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTCC............................................................................................................ 24 1 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................TGCTGACCGTCGGCGACCTG.............................................................................. 20 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................TGCTGTCGGGGCCTTTCTT........................................................................................................... 19 1 4 0.25 1 1 0 0 0 0 0 0 0
...........................ACCGCTGTCGGGGCCTTTCCT........................................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0 0 0
..............................GCTGTCGGGGCCTTTCCTCCCACT..................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................TTGATAGCGGTCAAGGGTGGCT........................................ 22 2 8 0.25 2 2 0 0 0 0 0 0 0
..........................................................................................TAACCGATAGCGGTCAAGGGTGGCT........................................ 25 1 8 0.25 2 2 0 0 0 0 0 0 0
....................................................................................................CGGTCAAGGGTGGCTGGGGTT.................................. 21 0 4 0.25 1 0 0 0 0 1 0 0 0
.........................................................................................CTCACCGATAGCGGTCAAGGGTGGCT........................................ 26 1 8 0.25 2 1 1 0 0 0 0 0 0
................................................................................................ATAGCGGTCAAGGGTGGC......................................... 18 0 8 0.25 2 2 0 0 0 0 0 0 0
.............................CGCTGTCGGGGCCTTTCTTCCCACTT.................................................................................................... 26 0 4 0.25 1 0 0 0 1 0 0 0 0
.............................................................................................TCGATAGCGGTCAAGGGTGGCT........................................ 22 1 8 0.25 2 2 0 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCTTTCCTCCC........................................................................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................................AAAACCGATAGCGGTCAAGGGTGGCT........................................ 26 3 8 0.25 2 2 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0 0 0
....................................................................................................CGGTCAAGGGTGGCTGGGGTTGCGT.............................. 25 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................CCTCCGCTGTCGGGGCCTTT.............................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0
...............................CTGTCGGGGCCTTTCTTCCCACTT.................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................................................................TTGGGCCTTAGCTGCTCGACGTGCT.. 25 1 12 0.25 3 2 0 1 0 0 0 0 0
....................GTTCTCCTCCGCTGTCGGGGCCTT............................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................................ATAGCGGTCAAGGGTGGCTTGGGCT.................................. 25 2 4 0.25 1 1 0 0 0 0 0 0 0
..........................CTCCGCTGTCGGGGCCTTTCTTC.......................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................................GTCAAGGGTGGCTGGGGT................................... 18 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................CCTCCGCTGTCGGGGCCTTTCCTC.......................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................................................GGCCTTAGCTGCTCGACGTGCT.. 22 1 12 0.25 3 3 0 0 0 0 0 0 0
....................GTCCTCCTCCGCTGTCGGGGCCTTTC............................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................CTGGTGCGTGGTTATTTCAC............................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................CCTGGTGCGTGGTTATTTCAC............................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0
...........................TCCGCTGTCGGGGCCTTTCCTCCCACTT.................................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTCGGGGCCTTT.............................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
......................CCTCCTCCGCTGTTGGGGCCTTTCTT........................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................GGTCAAGGGTGGCTGGGGTTGCG............................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................CGGCGACCTGGGGCGTGGT..................................................................... 19 1 13 0.23 3 2 1 0 0 0 0 0 0
............................................................................................AAAAATAGCGGTCAAGGGTGGC......................................... 22 3 9 0.22 2 2 0 0 0 0 0 0 0
...........................TTTGCTGTCGGGGCCTTTCTT........................................................................................................... 21 2 5 0.20 1 1 0 0 0 0 0 0 0
.......................CTCCTCCGCTGTCGGGGCCT................................................................................................................ 20 0 5 0.20 1 1 0 0 0 0 0 0 0
.................TGCGTTCTCCTCCGCTGTCGGGGCCT................................................................................................................ 26 2 5 0.20 1 1 0 0 0 0 0 0 0
................GCGCGTCCTCCTCCGCTGTTGGGGC.................................................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0
................GCGCGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0
.................CGCGTCCTCCTCCGCTGTCGGGGC.................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................................GGCTTTAGCTGCTCGACGTGCT.. 22 0 5 0.20 1 1 0 0 0 0 0 0 0
..........................TTCCGCTGTCGGGGCCTTTCT............................................................................................................ 21 1 5 0.20 1 1 0 0 0 0 0 0 0
..............CTGCGCGTCCTCCTCCGCTGTTGGGGCC................................................................................................................. 28 1 5 0.20 1 1 0 0 0 0 0 0 0
.....................TCCTCCTCCGCTGTTGGGGCC................................................................................................................. 21 1 5 0.20 1 1 0 0 0 0 0 0 0
.......................................................................................................................................TTAGCTGCTCGACGTGCT.. 18 0 5 0.20 1 1 0 0 0 0 0 0 0
................................................................................................................................TTGGGCCTTAGCTGCTCGACGTGC... 24 1 15 0.20 3 1 0 0 2 0 0 0 0
..........................TTCCGCTGTCGGGGCCTTTCTT........................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0
...............TGCGCGTCCTCCTCCGCTGTCGGGGC.................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................................GGTTGGCTGGGGTTGCGT.............................. 18 1 5 0.20 1 1 0 0 0 0 0 0 0
..............CTGCGCGTCCTCCTCCGCTGTCGGGGC.................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................TTCTCCTCCGCTGTCGGGGCCT................................................................................................................ 22 1 5 0.20 1 1 0 0 0 0 0 0 0
....................GTCCTCCTCCCCTGTCGGGGCCT................................................................................................................ 23 1 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................................GGCCTTAGCTGCTCGACGTGC... 21 1 15 0.20 3 3 0 0 0 0 0 0 0
...................CGTCCTCCTCCGCTGTTGGGGCCT................................................................................................................ 24 1 5 0.20 1 1 0 0 0 0 0 0 0
.................CGCGTCCTCCTCCGCTGTCGGGGCC................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................CTTTCTTCCCACTTAGGGCTGACCGT........................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0
................ACGCGTCCTCCTCCGCTGTCGGGGCC................................................................................................................. 26 1 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................................GGCTTTAGCTGCTCGACGTG.... 20 0 5 0.20 1 1 0 0 0 0 0 0 0
.............................................................................................CCGATAGCGGTCAAGGGTGGCTCGGGCTA................................. 29 3 5 0.20 1 1 0 0 0 0 0 0 0
................................................................................................................................TTGGGCTTTAGCTGCTCGACGTGCT.. 25 0 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................................GGGCTTTAGCTGCTCGACGCGC... 22 1 5 0.20 1 1 0 0 0 0 0 0 0
.....................TCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 22 0 5 0.20 1 1 0 0 0 0 0 0 0
............................................TGTTCCCACTTAGGGCTGACCGT........................................................................................ 23 1 5 0.20 1 1 0 0 0 0 0 0 0
...........................ATCGCTGTCGGGGCCTTTCCT........................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
................AAGCGTCCTCCTCCGCTGTCGGGGCCT................................................................................................................ 27 2 5 0.20 1 1 0 0 0 0 0 0 0
.......................................................................GACCTGGTGCGTGGTTAT.................................................................. 18 0 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................................GGGCTTTAGCTGCTCGACGTG.... 21 0 5 0.20 1 0 0 0 1 0 0 0 0
.......................TTCCTCCGCTGTCGGGGCCT................................................................................................................ 20 1 5 0.20 1 1 0 0 0 0 0 0 0
...........................................TTCCTCCCACTTAGGGCTGACCGT........................................................................................ 24 1 5 0.20 1 1 0 0 0 0 0 0 0
.................................GTCGGGGCCTTTCCTCCCACTT.................................................................................................... 22 1 11 0.18 2 2 0 0 0 0 0 0 0
.....................................GGGCCTTTCTTCCCACTTAGGGC............................................................................................... 23 0 11 0.18 2 2 0 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAAGGTGGCT........................................ 26 1 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................GTCACCGATAGCGGTCAAGGGTGGCT........................................ 26 1 6 0.17 1 1 0 0 0 0 0 0 0
.............CCTGCGCGTCCTCCTCCGCT.......................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGCCAAGGGTGGCT........................................ 26 1 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................CCACCGATAGCGGTCAAGGGTGGCA........................................ 25 2 6 0.17 1 0 1 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGG.............................................. 20 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................TTCACCGATCGCGGTCAAGGGTGGCT........................................ 26 1 6 0.17 1 0 0 1 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTAAAGGGTGGCT........................................ 25 1 6 0.17 1 0 1 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCACGGGTGGCT........................................ 25 1 6 0.17 1 0 1 0 0 0 0 0 0
.........................................................................................TTCACCGATGGCGGTCAAGGGTGGCT........................................ 26 1 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................ATCACCGATAGCGGTCAAGGGTGG.......................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................TTCACAGATAGCGGTCAAGGGTGGCT........................................ 26 1 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGGCC........................................ 25 1 6 0.17 1 1 0 0 0 0 0 0 0
..............................GCTGTCGGGGCCTTTGTT........................................................................................................... 18 1 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGCC......................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGGTGGCTCT...................................... 26 2 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAGGGGTGGCTTG...................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................GCACCGATAGCGGTCAAGGGTGG.......................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................................CACCGATAGCGGTCAAGGCTGGCT........................................ 24 1 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................TTCACCGATAGCGGTCAAGGG............................................. 21 0 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCTGTCAAGGGTGGCT........................................ 25 1 6 0.17 1 0 0 1 0 0 0 0 0
..........................................................................................TCACCGATAGCGGACAAGGGTGGCT........................................ 25 1 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................................CACCGATCGCGGTCAAGGGTGGCT........................................ 24 1 6 0.17 1 0 0 1 0 0 0 0 0
..........................................................................................CCACCGATAGCGGTCAAGGGTGGGT........................................ 25 2 6 0.17 1 0 1 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGTGGCA........................................ 25 1 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCAGTCAAGGGTGGCT........................................ 25 1 6 0.17 1 0 1 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGGGGGCT........................................ 25 1 6 0.17 1 0 0 1 0 0 0 0 0
..........................................................................................TCGCCGATAGCGGTCAAGGGCGGCT........................................ 25 2 6 0.17 1 0 0 1 0 0 0 0 0
...........................................................................................CCCCGATAGCGGTCAAGGGTGGCT........................................ 24 1 6 0.17 1 0 0 1 0 0 0 0 0
..................................................................................................................................TGGCCTTAGCTGCTCGACGTGCT.. 23 2 12 0.17 2 2 0 0 0 0 0 0 0
..........................................................................................TCACCGATAGCGGTCAAGGG............................................. 20 0 6 0.17 1 1 0 0 0 0 0 0 0
.....................................................................................................................................CCTTAGCTGCTCGACGTGCT.. 20 1 12 0.17 2 2 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_31:15618-15772 + dps_1956 CGGCCCG-----------------------------CAAACGGGACGCGCAGGAGGAGGCGACAGCCCCGGAAAGAAGGGTGAATCCCGACTGGCAGCCGCTGGACCACGCACCAATAAAGTGGCTATCGCCAGTTCCCACCGACCCCAACGCACCAAACCCGAAATCGACGAGCTGCACGACC
droPer2 scaffold_573:11038-11200 - CGACCCGATCCCGGACACCAGCTAGACGACGGGTGGCA---------------------CGCCAGCCACGGAAAGAAGGGTGAATCCCGACTGGCAGCCGCTGGACCACGCACCAATAAAGTGGCTATCGCCAGTTCCCACCGACCCCAACGCACCGAACCCGAAATCGACGAGCTGCACGACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CGGCCCG-----------------------------CAAACGGGACGCGCAGGAGGAGGCGACAGCCCCGGAAAGAAGGGTGAATCCCGACTGGCAGCCGCTGGACCACGCACCAATAAAGTGGCTATCGCCAGTTCCCACCGACCCCAACGCACCAAACCCGAAATCGACGAGCTGCACGACCSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...................................................................................................................................................................AAATCGACGAGCTGCACGACC2154.002002000000000
...................................................................................................................................................................AAATCGACGAGCTGCACGAC.2052.801401200000200
...................................................................CCGGAAAGAAGGGTGAATCCCGA..............................................................................................23122.753303300000000
......................................................................................................................................TTCCCACCGACCCCAACGCACC............................2242.2590900000000
......................................................................................................................................TTCCCACCGACCCCAACGCAC.............................2141.7570700000000
...................................................................CCGGAAAGAAGGGTGAATCCCG...............................................................................................22121.501801700000100
......................................................................................................................................TTCCCACCGACCCCAACGCACCAAACC.......................2721.0020200000000
..................................................................CCCGGAAAGAAGGGTGAATCCCGACT............................................................................................2641.0040200000200
...................................................................CCGGAAAGAAGGGTGAATCCC................................................................................................21120.83100910000000
.................................................................................................CCGCTGGACCACGCACCAATAAAG...............................................................2440.7530300000000
................................................................................................GCCGCTGGACCACGCACCAATA..................................................................2230.6720200000000
...................................................................CCGGAAAGAAGGGTGAATCCCGACT............................................................................................2550.6030110000100
.......................................................GAGGCGACAGCCCCGGAAAGAAG..........................................................................................................2340.5020200000000
..................................................................................................CGCTGGACCACGCACCAATAAAGTGG............................................................2640.5020200000000
.............................................................................................................................TATCGCCAGTTCCCACCGACCCCA...................................2440.5020200000000
...........................................................................................................................................................CAAACCCGAAATCGACGAGCTG.......2220.5010100000000
.......................................................GAGGCGACAGCCCCGGAAAGAAGG.........................................................................................................2440.5020200000000
................................................................................................GCCGCTGGACCACGCACCAATAAAG...............................................................2520.5010100000000
......................................................................................................................................TTCCCACCGACCCCAACGCACCAA..........................2420.5010100000000
...................................................................CCGGAAAGAAGGGTGAATCC.................................................................................................20120.4250320000000
....................................................................................................................................................................AATCGACGAGCTGCACGAC.1950.4020200000000
....................................................................CGGAAAGAAGGGTGAATCCCGA..............................................................................................22120.3340400000000
..............................................................................................................CACCAATAAAGTGGCTATCGCCAG..................................................2430.3310100000000
..........................................................................GAAGGGTGAATCCCGACTGGCAG.......................................................................................2330.3310100000000
...................................................................................ATCCCGACTGGCAGCCGCTG.................................................................................2030.3310100000000
.....................................................................................CCCGACTGGCAGCCGCTGG................................................................................1930.3310100000000
.................................................................................GAATCCCGACTGGCAGCCGT...................................................................................2030.3310100000000
....................................................................................TCCCGACTGGCAGCCGCTGGAC..............................................................................2230.3310100000000
.........................................................................................................................TGGCTATCGCCAGTTCCCACCGACC......................................2570.2920110000000
..................................................................................................CGCTGGACCACGCACCAATAAAG...............................................................2340.2510100000000
..................................................................................................................................CCAGTTCCCACCGACCCCAACGCA..............................2440.2510100000000
..................................................................................................CGCTGGACCACGCACCAATAAAGT..............................................................2440.2510100000000
......................................................GGAGGCGACAGCCCCGGAAAG.............................................................................................................2140.2510100000000
.................................................................CCCCGGAAAGAAGGGTGAATCCCGAC.............................................................................................2640.2510100000000
.....................................................................GGAAAGAAGGGTGAATCCCGA..............................................................................................21120.2530300000000
....................................................................................................................................................................AATCGACGAGCTGCACGACC2050.2010100000000
...................................................................CCGGAAAGAAGGGTGAATCCCGACTG...........................................................................................2650.2010100000000
.............................................................................................................................................................AACCCGAAATCGACGAGCTGC......2150.2010100000000
...................................................................................................................................................................AAATCGACGAGCTGCACGACA2150.2010100000000
................................................................................................................................................................CCGAAATCGACGAGCTGCACGAC.2350.2010100000000
...................................................................CCGGAAAGAAGGGTGAATCCCGAC.............................................................................................2450.2010100000000
..............................................GCGCAGGAGGAGGCGACAGCA.....................................................................................................................2160.1710100000000
.........................................GGGACGCGCAGGAGGAGGCGACA........................................................................................................................2360.1710100000000
...................................................................CCGGAAAGAAGGGTGAAT...................................................................................................18120.1720200000000
.........................................GGGACGCGCAGGAGGAGGCGAC.........................................................................................................................2260.1710100000000
........................................................................................................................GTGGCTATCGCCAGTTCCCAC...........................................2160.1710100000000
...................................................................CCGGAAAGAAGGGTGAATC..................................................................................................19120.1720110000000
.........................................................................................................................TGGCTATCGCCAGTTCCCACCGAC.......................................2470.1410010000000
.........................................................................................................................TGGCTATCGCCAGTTCCCACC..........................................2170.1410100000000
.........................................................................................................................TGGCTATCGCCAGTTCCCACCGAA.......................................2470.1410100000000
.........................................................................................................................TGGCTATCGCCAGTTCCCACCGACA......................................2570.1410100000000
.............................................................................................................................TATCGCCAGTTCCCACCGACC......................................2180.1310100000000
.........................................GGGACGCGCAGGAGGAGG.............................................................................................................................18200.1020200000000
..................................................................CCCGGAAAGAAGGGTGAATCCC................................................................................................22110.0910100000000
..................................................................CCCGGAAAGAAGGGTGAATCCCG...............................................................................................23110.0910100000000
.....................................................................GGAAAGAAGGGTGAATCC.................................................................................................18120.0810100000000
...................................................................CCGGAAAGAAGGGTGAATCCCGAAA............................................................................................25120.0810100000000
...................................................................CCGGAAAGAAGGGTGAATCCCGT..............................................................................................23120.0810100000000
...................................................................CCGGAAAGAAGGGTGAATCCCGTAA............................................................................................25120.0810100000000
...................................................................CCGGAAAGAAGGGTGAATCCCC...............................................................................................22120.0810100000000
....................................................................CGGAAAGAAGGGTGAATCCCG...............................................................................................21120.0810100000000
................................................................................................GCCGCTGGACCACGCACCAAT...................................................................21130.0810100000000
...........................................................................................TGGCAGCCGCTGGACCACGCACCAA....................................................................25130.0810100000000
.........................................GGGACGCGCAGGAGGAGGCG...........................................................................................................................20200.0510100000000
.........................................GGGACGCGCAGGAGGAGGCGT..........................................................................................................................21200.0510100000000
droPer2
CGACCCGATCCCGGACACCAGCTAGACGACGGGTGGCA---------------------CGCCAGCCACGGAAAGAAGGGTGAATCCCGACTGGCAGCCGCTGGACCACGCACCAATAAAGTGGCTATCGCCAGTTCCCACCGACCCCAACGCACCGAACCCGAAATCGACGAGCTGCACGACCSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.............................................................................................................GCACCAATAAAGTGGCTATCGCCAGTA................................................2760.171010000
..........................................................................................................................................CACCGACCCCAACGCACCGAAC........................2290.111010000
.......................................................................................................................................TCCCACCGACCCCAACGCACCGAACCC......................2790.111010000
...........................................................................................................................................ACCGACCCCAACGCACCGAACCCGA....................2590.111010000
.........................................................................................................................................CCACCGACCCCAACGCACCGAACCA......................2590.111010000

Generated: 05/18/2015 at 02:18 AM