ID:

dps_1947

 Coordinate:

Unknown_group_301:15478-15628 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.7 -16.6 -16.3

Flybase annnotation

CDS [Dpse\GA26135-cds]; exon [dpse_GLEANR_2865:2]; intron [Dpse\GA26135-in]

Repeatable elements

NameClassFamilyStrand
TRIMLINELOA+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGTTAACCAGGAGAACATTGCCTGGGCGATAAAAAGTTTTTAAGTTATAAGTCTGCGGAGCTAGAAGGCATTATCCCTGCCCAGCTGATTCACGCAGGACAAAAAACCATTAATTGGCTCAAAATAATTTACGCGGGAATCTTATCCCACGGGTGCATCCCTGACACCTGGCTTCAGATCTAAGTCGTTTTTATCCCCAAGGCAGACAAGCCCTCGGACCGGGGCATTGACTCCCGGACGGTCAGCCTGAT
**************************************************************************************((((...((...........(((.....))).................((((......)))).((((((((....)).))))))))....))))*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 V112
male body
.........................................................................................................................................................TGCATCCCTGACACCTGGCTTCAGATC....................................................................... 27 0 1 8.00 8 8 0 0 0 0 0
......................................................................................GATTCACGCAGGACAAAAAACCAT............................................................................................................................................. 24 0 1 8.00 8 6 2 0 0 0 0
............................................................................................................................TAATTTACGCGGGAATCTTATCC........................................................................................................ 23 0 1 5.00 5 4 0 1 0 0 0
............................................................................................................................TAATTTACGCGGGAATCTTATCCCA...................................................................................................... 25 0 1 4.00 4 1 3 0 0 0 0
..............................................................................................................TAATTGGCTCAAAATAATTTACGCGG................................................................................................................... 26 0 1 4.00 4 0 4 0 0 0 0
.............................................TATAAGTCTGCGGAGCTAGAAGGCAT.................................................................................................................................................................................... 26 0 1 3.00 3 0 3 0 0 0 0
............................................................................................................................TAATTTACGCGGGAATCTTATC......................................................................................................... 22 0 1 3.00 3 2 0 1 0 0 0
.....................................................TGCGGAGCTAGAAGGCATTATCCC.............................................................................................................................................................................. 24 0 1 3.00 3 0 3 0 0 0 0
......................................................................................GATTCACGCAGGACAAAAAACCATTAA.......................................................................................................................................... 27 0 1 3.00 3 2 1 0 0 0 0
................................AAAGTTTTTAAGTTATAAGTCTGCGG................................................................................................................................................................................................. 26 0 2 2.50 5 0 5 0 0 0 0
..............................................................................................................................................TATCCCACGGGTGCATCCCTGACACC................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
........................................TAAGTTATAAGTCTGCGGAGCTAGAAG........................................................................................................................................................................................ 27 0 2 2.00 4 1 3 0 0 0 0
............................................................................................................................TAATTTACGCGGGAATCTTATCCC....................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
........................................TAAGTTATAAGTCTGCGGAGCTAGAA......................................................................................................................................................................................... 26 0 2 2.00 4 0 4 0 0 0 0
.....................................................TGCGGAGCTAGAAGGCATTATCAA.............................................................................................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................TCCCCAAGGCAGACAAGCCCTCGG.................................. 24 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................GCATCCCTGACACCTGGCTTCAGAT........................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................TTCATCCCTGACACCTGGCTTCAGATC....................................................................... 27 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................TGGCTTCAGATCTAAGTCGTTTTTA.......................................................... 25 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................TAAGTCGTTTTTATCCCCAAGGCAGA............................................. 26 0 2 1.00 2 2 0 0 0 0 0
......................................................................................GATTCACGCAGGACAAAAAACCATTAAT......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
...................................................TCTGCGGAGCTAGAAGGCAT.................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
......................................................................................GATTCACGCAGGACAAAAAACC............................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................TCAGATCTAAGTCGTTTTTATCCCC..................................................... 25 0 1 1.00 1 1 0 0 0 0 0
....................................................................................CTGATTCACGCAGGACAAAAAACCAT............................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...................................................TCTGCGGAGCTAGAAGGCATTAAA................................................................................................................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCCCTCG................................... 26 1 18 0.78 14 14 0 0 0 0 0
.........................................................................................................................................................TGCATCCCTGACACCTGGCT.............................................................................. 20 0 7 0.57 4 4 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCCC...................................... 23 1 18 0.56 10 8 0 2 0 0 0
.............................................TATAAGTCTGCGGAGCTAGAAGGC...................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................TAAGTCGTTTTTATCCCCAAGG................................................. 22 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................................AGTCGTCTTTATCCCCAAGGCAGAC............................................ 25 1 2 0.50 1 0 0 1 0 0 0
.............................................TATAAGTCTGCGGAGCTAGAAGG....................................................................................................................................................................................... 23 0 2 0.50 1 0 0 0 1 0 0
...............................................TAAGTCTGCGGAGCTAGAA......................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCCCT..................................... 24 1 18 0.44 8 6 0 1 0 1 0
.........................................................................................................................................................TGCATCCCTGACACCTGGCTTCAGA......................................................................... 25 0 5 0.40 2 2 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCC....................................... 22 1 18 0.39 7 7 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCCCTC.................................... 25 1 18 0.33 6 6 0 0 0 0 0
..........................CGATAAAAAGATTCTATGTTAT........................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 1 0
.........................................................................................................................................................TGCATCCCTGACACCTGGC............................................................................... 19 0 7 0.29 2 2 0 0 0 0 0
...............................................................................................................................................................................................TATCCCCAAGGCAGGCAAGCCCTCG................................... 25 1 18 0.28 5 5 0 0 0 0 0
...TAACCAGGAGAACATTGCCTGGGCG............................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGC........................................ 21 1 18 0.22 4 4 0 0 0 0 0
...........................................................................................................................................................................................ATCTTATCCCCAAGGCAGGCAAGCCC...................................... 26 3 5 0.20 1 0 0 1 0 0 0
.........................................................................................................................................................TGCATCCCTGACACCTGGCTTCAG.......................................................................... 24 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................................................................CCCAAGGCAGACAAGCCC...................................... 18 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................................................TGCATCCCTGACACCTGGCTTC............................................................................ 22 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................................................TGCATCCCTGACACCTAGCTT............................................................................. 21 1 8 0.13 1 1 0 0 0 0 0
...............................................................................................................................................................................................TATCCCCAAGGCAGGCAAGCCC...................................... 22 1 18 0.11 2 2 0 0 0 0 0
.........................................................................................................................................................TGCATCCCTGACACCTGG................................................................................ 18 0 9 0.11 1 1 0 0 0 0 0
......................................................................................................................................................................................AGTCGTCTTTATCCCCAAGGCAG.............................................. 23 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................GTCGTCTTTATCCCCAAGGC................................................ 20 1 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................AGTCGTCTTTATCCCCAAGG................................................. 20 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................GTCGTCTTTATCCCCAAGGCAG.............................................. 22 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................GTCGTCTTTATCCCCAAGGCA............................................... 21 1 13 0.08 1 1 0 0 0 0 0
........................................................................................................................................................................................TCGTCTTTATCCCCAAGG................................................. 18 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................TGCGGGACGGTCAGCATGA. 19 3 16 0.06 1 0 0 0 0 0 1
...............................................................................................................................................................................................TATCCCCAAGGCAGGCAAGC........................................ 20 1 18 0.06 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCCCC..................................... 24 2 18 0.06 1 0 0 1 0 0 0
.............................................................................................................................................................................................TTTATCCCCAAGGCAGGCAAGCCC...................................... 24 1 18 0.06 1 1 0 0 0 0 0
...............................................................................................................................................................................................TATCCCCAAGGCAGGCAAGCCCTCGT.................................. 26 2 19 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAGCCCTCGT.................................. 27 2 19 0.05 1 0 0 0 0 1 0
............................................................................CTGCCCAGCTGATTCACGCGG.......................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTATCCCCAAGGCAGGCAAA......................................... 20 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................AGATTCACGAAGGAGAAAAA.................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................TGCATTCCTGACACCTGGCTTCGTAT........................................................................ 26 3 20 0.05 1 1 0 0 0 0 0
............................................................................CTGCCCAGCTGATTCACGCTGGAC....................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CCAATTGGTCCTCTTGTAACGGACCCGCTATTTTTCAAAAATTCAATATTCAGACGCCTCGATCTTCCGTAATAGGGACGGGTCGACTAAGTGCGTCCTGTTTTTTGGTAATTAACCGAGTTTTATTAAATGCGCCCTTAGAATAGGGTGCCCACGTAGGGACTGTGGACCGAAGTCTAGATTCAGCAAAAATAGGGGTTCCGTCTGTTCGGGAGCCTGGCCCCGTAACTGAGGGCCTGCCAGTCGGACTA
***********************************************************************((((...((...........(((.....))).................((((......)))).((((((((....)).))))))))....))))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 M062
head
...............................................................................................................................................................................TCTAGATTCAGCAAAAATAGGGGTT................................................... 25 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................................................GTGGACCGAAGTCTAGATTCAGCAA.............................................................. 25 0 1 2.00 2 1 1 0 0 0 0
.........................................................................AGGGACGGGTCGACTAAGTGCGT........................................................................................................................................................... 23 0 2 1.50 3 3 0 0 0 0 0
..............................................................................CGGGTCGACTAAGTGCGT........................................................................................................................................................... 18 0 2 1.00 2 2 0 0 0 0 0
....................................................................................................................................................................GTGGACCGAAGTCTAGATTCAGCAAA............................................................. 26 0 1 1.00 1 0 1 0 0 0 0
............................................................................GACGGGTCGACTAAGTGCGT........................................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0
.............................................................................................................................................................................AGTCTAGATTCAGCAAAAATAGGGGTT................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................GTCTGTTCGGGAGCCTGGCCCCGT......................... 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................CTTGGATGCGCCCTTAGAATA.......................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
...........................................................................GGACGGGTCGACTAAGTGCGT........................................................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0
...........................................................................GGACGGGTCGACTAAGTGC............................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0
.....TGGTCCTCTTGTAACGGACCCGCTAT............................................................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0 0
............................................................................CACGGGTCGACTAAGTGCGT........................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0
..................................TCAAAAATTCAATATTCAGACGCCTCGAT............................................................................................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0 0
.........CCTCTTGTAACGGACCCGCTATTTT......................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
..........................................................................GGGACGGGTCGACTAAGTGCGT........................................................................................................................................................... 22 0 2 0.50 1 0 0 0 1 0 0
...........................................................................GGACGGGTCGACTAAGTGCGTACGGT...................................................................................................................................................... 26 2 2 0.50 1 0 0 0 0 1 0
...................................CAAAAATTCAATATTCAGACGCCTCGAT............................................................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................................TTCAGCAAAACAAGGGGTT................................................... 19 2 5 0.20 1 0 0 1 0 0 0
..............................................................................................................ATTAACCGAGTTTTATTAAATGC...................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0
......................................................CCCCTCGATTTTCCTTAATA................................................................................................................................................................................. 20 3 9 0.11 1 0 0 1 0 0 0
..............................................................................................................................................................GGGACTGTGGACCGAAGTCT......................................................................... 20 0 9 0.11 1 1 0 0 0 0 0
...............................................................................GGGTCGACTAAGGGTGTCCG........................................................................................................................................................ 20 3 10 0.10 1 0 0 0 1 0 0
..................................................................................................................................................................................................GGGGTTCTGTCTGTTAGCGA..................................... 20 3 11 0.09 1 1 0 0 0 0 0
..................................................................................................................................................................................AGTTTCAGCAGAAATAGGGGTT................................................... 22 2 12 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................TCAGCAGAAATAGGGGTTCCGT............................................... 22 1 13 0.08 1 1 0 0 0 0 0
.....................................................................................................................................................................................TTCAGCAGAAATAGGGTT.................................................... 18 2 16 0.06 1 0 0 1 0 0 0
...............................................................................................................................................................................................AAAGGGGTTCCGTCCGTTCGGGAGCTT................................. 27 3 18 0.06 1 0 0 1 0 0 0
.........................................................................................................TGGTAATTGACCGAGTTTTATT............................................................................................................................ 22 1 19 0.05 1 0 0 0 1 0 0
..............................................................................................................................................TTAGGGTGCCCACGTAAGGA......................................................................................... 20 2 20 0.05 1 0 0 0 0 0 1
.............................................................................AAGGGTCGACTAAGTGCGA........................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0
...............................................................................................................................................TAGGGTGCCCACGTAAGGACT....................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..................................................................CCGTAAAAGGGACGGGTCGACT................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_301:15428-15678 + dps_1947 GGTTAACC-AGGAGAACATTGCCTGGGCGATAAAAAGTTTTTAA-G-TTATAAGTCTGCGGAGCTAGAAGGCATTATCCCTGCCCAGCTGATTCACGCAGGACAAAAAACCATTAATTGGCTCAAAATAATTTACGCGGGAATCTTATCCCACGGGTGCATCCCTGACACCTGGCTTCAGATCTAAGTCGTTTTTATCCCCAAGGCAGACAAGCCC-TCGGACCG--GGG-CATTGACTCCCGGACGGTCAGCCTGAT--------
droPer2 scaffold_64:264464-264714 + GGTTAACC-AGGAGAACATTGCCTGGGCGATAAAAAGTTTTTAA-G-TTATAAGTCTGCGGAGCCAGAAGGCATTATCCCTGCCCAGCTGATTCACGCAGGACAAAAAGCCATTAATTGGCTCAAAATAATTTACAAGGAAATCTTATCCCACGGGTGCATCCCTGACACCTGGCTTCAGATCTAAGTCGTTTTTATCCCCAAGGCAGACAAGCCC-TCGGACCG--GGG-CATTGACTCCCGGACGGTCAGCCTGAT--------
droVir3 scaffold_12970:7635728-7635764 + CGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCT--GGA-GGTCGACCCCCGGATCGTGAACCTTAT--------
droGri2 scaffold_7543:1777-2029 + TATAAACA-AAAATAACATCGAATGGGCAGTGAACAGTTTTAAG-CCGTTCAAATCTCCAGGCCCTGATCAGATAAGCCCAGTCCAATTACAGAAGGCGGGAAACACAGCCATAGACTGGCTACATGAAATCTTCGGGAAGATTCTGAAGACTGGTTGCATCCCACCCACATGGCTCCAGTCAAAAATAGCCTTCATACCCAAAGCTGGGAAGCCA-TCGCACACCAGCGCCAAAGATTTCAGACCCATCAGTCTG----------
droAna3 scaffold_13055:8248-8500 - ACTTAGTG-ACAGAAATCTTAAATGGGCAATAGACAGTTTTAAA-CCCTTCAAATCTCCGGGACCGGACGGTATTCTACCAGCTCAGTTATCCAGAGCCGGTATTAACCTAAGGAAATGGATTAAGAAAATCTTCAGCACAGTCTTCACTACTGGTATGATACCAAAGGCATGGCTGTGCACGAAGGTTGTATTCATACCCAAGGCGGGGAAACCA-TCCCACTGGACCCCCAAGGACTTCAGACCTGTAAGTCTG----------
droBip1 scf7180000396596:4571-4819 - GAGTGACA----GGTATCTCAGCTGGGCGATAAATAGCTTCAAG-CCTTTCAAATCCCCAGGCCCAGATGGCATTGTCCCGGCTCAACTAATTAAAGCCGGACCCAATCCGAGCTCTTGGGTCAAGAAAGCTTTCTCAGCAATTTTCAGGATAGGCATCGTACCCGCAATGTGGTTGCGGACGAAAGTCGTATTTATACCCAAGGCGGGAAAACCA-TCTCACTGCACGCCTTAGGACTTCG-GACAATAAGCCTG----------
droEle1 scf7180000490380:94399-94436 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAGTTTTTATACCCAAAGCGGGCAAAGCC-TCGCAC-------------------------------------------
droRho1 scf7180000762989:100-341 + AAT--------------ATAAACTGGTCCATTCATAGTTTTTAAGCCATACAAATCGCCGGGACCGGACAATATAACACCGGCACATATTCAGCAAGCAGGAGAACTAGCTATAAACTGGCTGAGAAAAATCTTCCAGACCATTCTTGCAGTAGGAGAACTACCTACAGCATGGCGGGAAACGAAAGTCGTTTTCATCCCTAAGGCAGGGAAAGCC-ACCCATACTACAGCGAATGATTTCAGACCGATAAGTCTGA---------
droBia1 scf7180000301513:16266-16317 + AATCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TGAGAGCT--AGG-GGTTGAGCCGTCAATGGTGCGGCTGATACATAAAT
droTak1 scf7180000414456:11999-12249 - TATCAAAC-C--GCAACATTAAATGGGCCATTCAGAGCTTCAAA-CCATACAAATCACCGGGACCAGACGGAATAACACCGGCACATATCCAACAAGCTGGCCAGCTAGCTATAAATTGGCTTAGTAAAATCTTCCACACCATTCTGGCAGTAGGAGAACTACCAACAGCATGGCGAGAAACGAAAGTGGTCTTCATTCCCAAGGCAGGGAAAGCCCCCACAC--CACAGCAAAAGACTTCAGGCCAATAAGCCTGA---------
droYak3 2R:1243070-1243321 + GCTTAGACCCAAAGGTCCTCCATTGGGCCATACACAGTTTTAAA-CCATACAAATCTGCAGGTCCAGACTAAATCATACCCGCACAAATCCAACATGCGGGAAATATACCCATAAACTGGCTTCTACACATTTTTAAAAGGTCCCTATTTCTTGGACACCTACCGCAATCGTGGCTAGAGTACTGAATTGTCTTTATCCTCAAAGCAGGGAAACCA-TCACACAC--GACCCAAAGATTTCAAACCAATCAGTCTG----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGTTAACC-AGGAGAACATTGCCTGGGCGATAAAAAGTTTTTAA-G-TTATAAGTCTGCGGAGCTAGAAGGCATTATCCCTGCCCAGCTGATTCACGCAGGACAAAAAACCATTAATTGGCTCAAAATAATTTACGCGGGAATCTTATCCCACGGGTGCATCCCTGACACCTGGCTTCAGATCTAAGTCGTTTTTATCCCCAAGGCAGACAAGCCC-TCGGACCG--GGG-CATTGACTCCCGGACGGTCAGCCTGAT--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................TGCATCCCTGACACCTGGCTTCAGATC...................................................................................2718.0080800000000
.........................................................................................GATTCACGCAGGACAAAAAACCAT.........................................................................................................................................................2418.0080600000200
...............................................................................................................................TAATTTACGCGGGAATCTTATCC....................................................................................................................2315.0050410000000
...............................................................................................................................TAATTTACGCGGGAATCTTATCCCA..................................................................................................................2514.0040100000300
.................................................................................................................TAATTGGCTCAAAATAATTTACGCGG...............................................................................................................................2614.0040000000400
................................................TATAAGTCTGCGGAGCTAGAAGGCAT................................................................................................................................................................................................2613.0030000000300
...............................................................................................................................TAATTTACGCGGGAATCTTATC.....................................................................................................................2213.0030210000000
........................................................TGCGGAGCTAGAAGGCATTATCCC..........................................................................................................................................................................................2413.0030000000300
.........................................................................................GATTCACGCAGGACAAAAAACCATTAA......................................................................................................................................................2713.0030200000100
.................................AAAGTTTTTAA-G-TTATAAGTCTGCGG.............................................................................................................................................................................................................2622.5050000000500
.................................................................................................................................................TATCCCACGGGTGCATCCCTGACACC...............................................................................................2612.0020200000000
.........................................TAA-G-TTATAAGTCTGCGGAGCTAGAAG....................................................................................................................................................................................................2722.0040100000300
...............................................................................................................................TAATTTACGCGGGAATCTTATCCC...................................................................................................................2412.0020200000000
.........................................TAA-G-TTATAAGTCTGCGGAGCTAGAA.....................................................................................................................................................................................................2622.0040000000400
........................................................TGCGGAGCTAGAAGGCATTATCAA..........................................................................................................................................................................................2411.0010000000100
....................................................................................................................................................................................................TCCCCAAGGCAGACAAGCCC-TCGG.............................................2411.0010100000000
.............................................................................................................................................................GCATCCCTGACACCTGGCTTCAGAT....................................................................................2511.0010100000000
...........................................................................................................................................................................TGGCTTCAGATCTAAGTCGTTTTTA......................................................................2511.0010100000000
.......................................................................................................................................................................................TAAGTCGTTTTTATCCCCAAGGCAGA.........................................................2621.0020200000000
.........................................................................................GATTCACGCAGGACAAAAAACCATTAAT.....................................................................................................................................................2811.0010100000000
......................................................TCTGCGGAGCTAGAAGGCAT................................................................................................................................................................................................2011.0010000000100
.........................................................................................GATTCACGCAGGACAAAAAACC...........................................................................................................................................................2211.0010100000000
................................................................................................................................................................................TCAGATCTAAGTCGTTTTTATCCCC.................................................................2511.0010100000000
.......................................................................................CTGATTCACGCAGGACAAAAAACCAT.........................................................................................................................................................2611.0010100000000
......................................................TCTGCGGAGCTAGAAGGCATTAAA............................................................................................................................................................................................2411.0010000000100
............................................................................................................................................................TGCATCCCTGACACCTGGCT..........................................................................................2070.5740400000000
................................................TATAAGTCTGCGGAGCTAGAAGGC..................................................................................................................................................................................................2420.5010100000000
.......................................................................................................................................................................................TAAGTCGTTTTTATCCCCAAGG.............................................................2220.5010100000000
................................................TATAAGTCTGCGGAGCTAGAAGG...................................................................................................................................................................................................2320.5010000000010
..................................................TAAGTCTGCGGAGCTAGAA.....................................................................................................................................................................................................1920.5010100000000
............................................................................................................................................................TGCATCCCTGACACCTGGCTTCAGA.....................................................................................2550.4020200000000
............................................................................................................................................................TGCATCCCTGACACCTGGC...........................................................................................1970.2920200000000
...TAACC-AGGAGAACATTGCCTGGGCG.............................................................................................................................................................................................................................................2540.2510100000000
............................................................................................................................................................TGCATCCCTGACACCTGGCTTCAG......................................................................................2450.2010100000000
......................................................................................................................................................................................................CCCAAGGCAGACAAGCCC-.................................................1850.2010100000000
............................................................................................................................................................TGCATCCCTGACACCTGGCTTC........................................................................................2250.2010100000000
............................................................................................................................................................TGCATCCCTGACACCTGG............................................................................................1890.1110100000000
droPer2
GGTTAACC-AGGAGAACATTGCCTGGGCGATAAAAAGTTTTTAA-G-TTATAAGTCTGCGGAGCCAGAAGGCATTATCCCTGCCCAGCTGATTCACGCAGGACAAAAAGCCATTAATTGGCTCAAAATAATTTACAAGGAAATCTTATCCCACGGGTGCATCCCTGACACCTGGCTTCAGATCTAAGTCGTTTTTATCCCCAAGGCAGACAAGCCC-TCGGACCG--GGG-CATTGACTCCCGGACGGTCAGCCTGAT--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................ACACCTGGCTTCAGATCTAAGTCGTTT.........................................................................2711.001010000
.........................................................................................GATTCACGCAGGACAAAAAGCCATTA.......................................................................................................................................................2620.501010000
......................................................................................................................................................................................CTAAGTCGTTTTTATCCCCAAGGCAGA.........................................................2720.501010000
.........................................................................................GATTCACGCAGGACAAAAAGCCATTAA......................................................................................................................................................2720.501010000
...........................................................................................................................................................GTGCATCCCTGACACCTGG............................................................................................1990.111010000
droVir3
CGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCT--GGA-GGTCGACCCCCGGATCGTGAACCTTAT--------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TATAAACA-AAAATAACATCGAATGGGCAGTGAACAGTTTTAAG-CCGTTCAAATCTCCAGGCCCTGATCAGATAAGCCCAGTCCAATTACAGAAGGCGGGAAACACAGCCATAGACTGGCTACATGAAATCTTCGGGAAGATTCTGAAGACTGGTTGCATCCCACCCACATGGCTCCAGTCAAAAATAGCCTTCATACCCAAAGCTGGGAAGCCA-TCGCACACCAGCGCCAAAGATTTCAGACCCATCAGTCTG----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
ACTTAGTG-ACAGAAATCTTAAATGGGCAATAGACAGTTTTAAA-CCCTTCAAATCTCCGGGACCGGACGGTATTCTACCAGCTCAGTTATCCAGAGCCGGTATTAACCTAAGGAAATGGATTAAGAAAATCTTCAGCACAGTCTTCACTACTGGTATGATACCAAAGGCATGGCTGTGCACGAAGGTTGTATTCATACCCAAGGCGGGGAAACCA-TCCCACTGGACCCCCAAGGACTTCAGACCTGTAAGTCTG----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................TGGTATGATACCAAAGGCATGGCTGTG.......................................................................................27200.102200000
...........................................................................................................................................CAGTCTTCACTACTGGTATGATACC......................................................................................................25200.102020000
..............................................................................................................................AAAATCTTCAGCACAGTCTTCACT....................................................................................................................24200.102200000
.....................................................................................................................................................TACTGGTATGATACCAAAGGCATGGC...........................................................................................26200.102200000
......TG-ACAGAAATCTTAAATGGGCAATAGA........................................................................................................................................................................................................................................27200.051100000
..................................................................................................................................................................................................CATACCCAAGGCGGGGAAACCA-TCCCAC...........................................28200.051010000
.......................................TTAAA-CCCTTCAAATCTCCGGGACCGGAC.....................................................................................................................................................................................................29200.051010000
.....................................................ATCTCCGGGACCGGACGGTATTC..............................................................................................................................................................................................23200.051100000
..........................................................................................................................TAAGAAAATCTTCAGCACAGTCTTCACT....................................................................................................................28200.051010000
...................................................................................................................................................................CAAAGGCATGGCTGTGCACGAAGG...............................................................................24200.051100000
..........................................AA-CCCTTCAAATCTCCGGGACCGGACGGT..................................................................................................................................................................................................29200.051100000
.........................................................................................................................................CACAGTCTTCACTACTGGTATGATAC.......................................................................................................26200.051100000
......TG-ACAGAAATCTTAAATGGGCAATAG.........................................................................................................................................................................................................................................26200.051010000
..................................................................................................................................TCTTCAGCACAGTCTTCACTACTGGTA.............................................................................................................27200.051100000
.......................................................CTCCGGGACCGGACGGTATTCTACCAGC.......................................................................................................................................................................................28200.051010000
....................................................................................CAGTTATCCAGAGCCGGTATTAACCT............................................................................................................................................................26200.051100000
..................................................................................................................................................CACTACTGGTATGATACCAAAGGCATG.............................................................................................27200.051010000
....AGTG-ACAGAAATCTTAAATGGGCC.............................................................................................................................................................................................................................................24200.051000001
..........................................AA-CCCTTCAAATCTCCGGGACCG........................................................................................................................................................................................................23200.051100000
........................................TAAA-CCCTTCAAATCTCCGGGACCGGAC.....................................................................................................................................................................................................28200.051010000
....AGTG-ACAGAAATCTTAAATGGGCA.............................................................................................................................................................................................................................................24200.051010000
.................................................................................................................................................TCACTACTGGTATGATACCAAAGGC................................................................................................25200.051100000
.....................................................................................................................TGGATTAAGAAAATCTTCAGCAC..............................................................................................................................23200.051100000
droBip1
GAGTGACA----GGTATCTCAGCTGGGCGATAAATAGCTTCAAG-CCTTTCAAATCCCCAGGCCCAGATGGCATTGTCCCGGCTCAACTAATTAAAGCCGGACCCAATCCGAGCTCTTGGGTCAAGAAAGCTTTCTCAGCAATTTTCAGGATAGGCATCGTACCCGCAATGTGGTTGCGGACGAAAGTCGTATTTATACCCAAGGCGGGAAAACCA-TCTCACTGCACGCCTTAGGACTTCG-GACAATAAGCCTG----------SizeHit CountTotal NormTotal
No Reads
droEle1
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAGTTTTTATACCCAAAGCGGGCAAAGCC-TCGCAC-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAT--------------ATAAACTGGTCCATTCATAGTTTTTAAGCCATACAAATCGCCGGGACCGGACAATATAACACCGGCACATATTCAGCAAGCAGGAGAACTAGCTATAAACTGGCTGAGAAAAATCTTCCAGACCATTCTTGCAGTAGGAGAACTACCTACAGCATGGCGGGAAACGAAAGTCGTTTTCATCCCTAAGGCAGGGAAAGCC-ACCCATACTACAGCGAATGATTTCAGACCGATAAGTCTGA---------SizeHit CountTotal NormTotal
No Reads
droBia1
AATCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TGAGAGCT--AGG-GGTTGAGCCGTCAATGGTGCGGCTGATACATAAATSizeHit CountTotal NormTotal
No Reads
droTak1
TATCAAAC-C--GCAACATTAAATGGGCCATTCAGAGCTTCAAA-CCATACAAATCACCGGGACCAGACGGAATAACACCGGCACATATCCAACAAGCTGGCCAGCTAGCTATAAATTGGCTTAGTAAAATCTTCCACACCATTCTGGCAGTAGGAGAACTACCAACAGCATGGCGAGAAACGAAAGTGGTCTTCATTCCCAAGGCAGGGAAAGCCCCCACAC--CACAGCAAAAGACTTCAGGCCAATAAGCCTGA---------SizeHit CountTotal NormTotal
No Reads
droYak3
GCTTAGACCCAAAGGTCCTCCATTGGGCCATACACAGTTTTAAA-CCATACAAATCTGCAGGTCCAGACTAAATCATACCCGCACAAATCCAACATGCGGGAAATATACCCATAAACTGGCTTCTACACATTTTTAAAAGGTCCCTATTTCTTGGACACCTACCGCAATCGTGGCTAGAGTACTGAATTGTCTTTATCCTCAAAGCAGGGAAACCA-TCACACAC--GACCCAAAGATTTCAAACCAATCAGTCTG----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................TAAATCATACCCGCACAAATCCAACATG.........................................................................................................................................................................2811.00101000000000
................................................................................................................................................................................................TTTATCCTCAAAGCAGGGA.......................................................1911.00101000000000
..................................................................GACTAAATCATACCCGCA......................................................................................................................................................................................1811.00101000000000
.....................................TTTTAAA-CCATACAAATCTGCAGG............................................................................................................................................................................................................24120.25303000000000
...............TCCTCCATTGGGCCATACACAGTTTT.................................................................................................................................................................................................................................2650.20101000000000
........................................................................................................................................................TGGACACCTACCGCAATCGTGGCTAG........................................................................................2660.17101000000000
........................................TAAA-CCATACAAATCTGCAGGTCCA........................................................................................................................................................................................................2590.11101000000000

Generated: 05/18/2015 at 02:14 AM