ID:

dps_1946

 Coordinate:

Unknown_group_301:14433-14583 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.6 -20.4 -20.3

Flybase annnotation

exon [dpse_GLEANR_2865:1]; CDS [Dpse\GA26135-cds]; intron [Dpse\GA26135-in]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGGAGGAGCAGGAGTCCCCCGAAAGCGACCTTAAAACAACAATGGTGGAGGTGAGCCTCAGAAATGTCACTGACGCTCTTGCTCCTGCAGCCCCTGCAGCTCCTGCTTCGTACCAACACACTTGCAAAAAAAATGTTGCACTTATTTTTGCTCCAAAATTTTAGCAATGAAGAACACACAGCAGTGAGCCTCGAAGGTCAGGAGCGCTCACTGAGGATCTGCTCCGCGCACATGGGTCACGAACAACCTGA
***********************************************************............((.((....))))((((((...))))))...(((((..((.......((.((((.((((...((..(((........)))..))...)))).))))))......))..)))))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M040
female body
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM444067
head
 GSM343916
embryo
...............................................................................................................................................................TTTAGCAATGAAGAACACACAGCAG................................................................... 25 0 1 49.00 49 47 2 0 0 0 0 0
..............................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACAACC... 26 0 1 7.00 7 0 7 0 0 0 0 0
................................................................................................................................................................TTAGCAATGAAGAACACACAGCAG................................................................... 24 0 1 5.00 5 5 0 0 0 0 0 0
...........................................................AGAAATGTCACTGACGCTCTTGC......................................................................................................................................................................... 23 0 1 5.00 5 5 0 0 0 0 0 0
....................................................................................................................................................................CAATGAAGAACACACAGCAGTGAGCCT............................................................ 27 0 1 3.00 3 0 3 0 0 0 0 0
..............................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACA...... 23 0 1 2.00 2 0 2 0 0 0 0 0
...................................................................................................................................................................................................................TGAGGATCTGCTCCGCGCACATGGG............... 25 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGCT............................ 26 0 2 1.00 2 0 2 0 0 0 0 0
...............................................................................................................................................................TTTAGCAATGAAGAACACACAGCA.................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................................................................GCAGTGAGCCTCGAAGGT..................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGC............................. 25 0 2 1.00 2 0 2 0 0 0 0 0
...............................................................................................................................................................TTTAGCAATGAAGAACACACA....................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACAA..... 24 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TGAAGAACACACAGCAGTGAGCCTC........................................................... 25 0 2 1.00 2 0 2 0 0 0 0 0
...............................................................................................................................................................TTTAGCAATGAAGAACACACAGCAGT.................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................CACAGCAGTGAGCCTCGAAGGTC.................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACAAC.... 25 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATC................................ 21 0 20 0.65 13 2 8 0 3 0 0 0
......................................................................................................................................................................ATGAAGAACACACAGCAGTGAGCC............................................................. 24 0 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGTT............................ 26 1 2 0.50 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TGAAGAACACACAGCAGTGAGCCT............................................................ 24 0 2 0.50 1 0 1 0 0 0 0 0
........................................................................................................................................................................................TGAGCCTTGAAGGTCAGGAGCGC............................................ 23 1 2 0.50 1 0 1 0 0 0 0 0
..................................................GTGAGCCTCAGAAATGTCACTGA.................................................................................................................................................................................. 23 0 2 0.50 1 0 1 0 0 0 0 0
......................................................................................................................................................................ATGAAGAACACACAGCAGTGAGCCT............................................................ 25 0 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCT............................... 23 0 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGCA............................ 26 1 2 0.50 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TGAAGAACACACAGCAGTGAGC.............................................................. 22 0 2 0.50 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AGCGCTCACTGAGGATCTGC............................. 20 0 20 0.45 9 0 7 0 0 2 0 0
...............................................................................................................................................................................................................TCACTGAGGATCTGCTCCGC........................ 20 0 20 0.35 7 0 7 0 0 0 0 0
.............................................................................................................................................................................................................GCTCACTGAGGATCTGCTCCG......................... 21 0 20 0.25 5 0 4 0 1 0 0 0
..........................................................................................................................................................................................................AGCGCTCACTGAGGATCTGCT............................ 21 0 20 0.20 4 0 4 0 0 0 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTG.............................. 23 0 20 0.20 4 0 4 0 0 0 0 0
..........................................................................................................................................................................................................AGCGCTCACTGAGGATCTG.............................. 19 0 20 0.20 4 0 4 0 0 0 0 0
.......................................................................GGCGCTCTTGCTCTTACAGC................................................................................................................................................................ 20 3 16 0.19 3 0 3 0 0 0 0 0
..............................................................................................................................................................................................................CTCACTGAGGATCTGCTCCG......................... 20 0 20 0.15 3 0 3 0 0 0 0 0
..............................................................................................................................................................................................................CTCACTGAGGATCTGCTCCGC........................ 21 0 20 0.15 3 2 0 0 0 1 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTGC............................. 24 0 20 0.10 2 0 2 0 0 0 0 0
..................................................................................................................................................................................CAGCAGTGAGCCTCGAAGG...................................................... 19 0 20 0.10 2 0 2 0 0 0 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGG................................... 18 0 20 0.10 2 0 2 0 0 0 0 0
...........................................................................................................................................................................................................GCGCTCACTGAGGATCTGC............................. 19 0 20 0.10 2 0 2 0 0 0 0 0
........................................................................................................................................................................................................GGAGCGCTCACTGAGGATCTG.............................. 21 0 20 0.10 2 1 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCCG......................... 22 0 20 0.10 2 0 2 0 0 0 0 0
.........................................................................................................................................................................................................GAGCGCTCACTGAGGATCTGC............................. 21 0 20 0.10 2 1 1 0 0 0 0 0
.......................................AAATGGTGGAGGTGAGCCTCAG.............................................................................................................................................................................................. 22 1 11 0.09 1 0 0 0 0 0 1 0
..................................................GTGAGCCTCAGAACCGTCGC..................................................................................................................................................................................... 20 3 17 0.06 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................AGGTCAGGAGTGCTCTCTT...................................... 19 3 19 0.05 1 0 0 0 1 0 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTT.............................. 23 1 20 0.05 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TGAAGAACACACCGCAGTAAGCCTCGA......................................................... 27 2 20 0.05 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................GGAGCGCTCACTGAGGATCT............................... 20 0 20 0.05 1 0 0 0 0 0 1 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCT............................... 22 0 20 0.05 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGC............................. 18 0 20 0.05 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCTGC........................ 23 1 20 0.05 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................CTCACTGAGGATCTGCTCTG......................... 20 1 20 0.05 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................TGAGCGCTCACTGAGGATCTGCTCCGC........................ 27 1 20 0.05 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGCTC........................... 20 0 20 0.05 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................CGCTCAGTGAGGATCTGCTC........................... 20 1 20 0.05 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................CGGGAGCGCTCACTGAGGAT................................. 20 1 20 0.05 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................GCGCTCACTGAGGATCTGCTC........................... 21 0 20 0.05 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCCGC........................ 23 0 20 0.05 1 0 0 0 0 0 0 1
..............................................................................................................................................................................................................CTCACTGGGGATCTGCTCCG......................... 20 1 20 0.05 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................TGAGCGCTCACTGAGGATCTGCTA........................... 24 2 20 0.05 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTGCT............................ 25 0 20 0.05 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTGTT............................ 25 1 20 0.05 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................TGAGCGCTCACTGAGGATCTGC............................. 22 1 20 0.05 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCCGCAC...................... 25 1 20 0.05 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................TGAGGATCTGCTCCGCACACATGG................ 24 1 20 0.05 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................GCTCACTGAGGATCTGCTCC.......................... 20 0 20 0.05 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................ACTGAGGATCTGCTCCGC........................ 18 0 20 0.05 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................GGGAGCGCTCACTGAGGATC................................ 20 1 20 0.05 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCC.......................... 21 0 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

CCCTCCTCGTCCTCAGGGGGCTTTCGCTGGAATTTTGTTGTTACCACCTCCACTCGGAGTCTTTACAGTGACTGCGAGAACGAGGACGTCGGGGACGTCGAGGACGAAGCATGGTTGTGTGAACGTTTTTTTTACAACGTGAATAAAAACGAGGTTTTAAAATCGTTACTTCTTGTGTGTCGTCACTCGGAGCTTCCAGTCCTCGCGAGTGACTCCTAGACGAGGCGCGTGTACCCAGTGCTTGTTGGACT
*******************************************************************............((.((....))))((((((...))))))...(((((..((.......((.((((.((((...((..(((........)))..))...)))).))))))......))..)))))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M040
female body
 M059
embryo
 V112
male body		 GSM444067
head
 GSM343916
embryo
 SRR902011
testis
.........................................................................................................GAAGCATGGTTGTGTGAACGTTTTT......................................................................................................................... 25 0 1 6.00 6 6 0 0 0 0 0 0
.......................................................................................GTCGGGGACGTCGAGGACGAAGCAT........................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................CGGGGACGTCGAGGACGAAGCAT........................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0
................GGGGCTTTCGCTGGAATTTTGTTGT.................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................GACGTCGAGGACGAAGCATGGTTG...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................GAGAACGAGGACGTCGGGGACGT......................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................ACGTCGGGGACGTCGAGGACGAAGCAT........................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
......................TTCGCTGGAATTTTGTTGTTACCAC............................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................AGGTTTTAAAATCGTTACTTCTTGTG.......................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GACGTCGAGGACGAAGCATGGT........................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................TCCAGTCCTCGCGAGTGACTCCT.................................. 23 0 2 0.50 1 0 1 0 0 0 0 0
................................................................................................................................................................................................CTTCCAGTCCTCGCGAGTGACTCCT.................................. 25 0 2 0.50 1 0 1 0 0 0 0 0
....................................................CTCGGAGTCTTTACAGTGACTGC................................................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................CGCGAGTGACTCCTAGACGAGGCG........................ 24 0 20 0.30 6 0 6 0 0 0 0 0
.............................................................................................................................................................................................................CGAGTGACTCCTAGACGAGGC......................... 21 0 20 0.25 5 0 5 0 0 0 0 0
......................................................................................................................................................................................................GTCCTCGCGAGTGACTCCTA................................. 20 0 20 0.25 5 0 5 0 0 0 0 0
.......................................TTTACCACCTCCACTCGGAGTCAT............................................................................................................................................................................................ 24 2 10 0.20 2 0 2 0 0 0 0 0
.......................................TTTACCACCTCCACTCGGAGTCATT........................................................................................................................................................................................... 25 2 10 0.20 2 0 2 0 0 0 0 0
.......................................................................................................................................................................................................TCCTCGCGAGTGACTCCTAGA............................... 21 0 20 0.20 4 0 4 0 0 0 0 0
..................................ATGTTGTTACCACCTCCACTCGGAGT............................................................................................................................................................................................... 26 1 6 0.17 1 0 1 0 0 0 0 0
............................................CACCTCCACTCGGAGTCATTACAGT...................................................................................................................................................................................... 25 1 8 0.13 1 0 1 0 0 0 0 0
....................................GTTGTTACCACCTCCACT..................................................................................................................................................................................................... 18 0 18 0.11 2 0 2 0 0 0 0 0
.........................................TACCACCTCCACTCGGAGTCAT............................................................................................................................................................................................ 22 1 10 0.10 1 0 0 0 0 0 1 0
...........................................................................................................................................................................................................CGCGAGTGACTCCTAGACGA............................ 20 0 20 0.10 2 0 2 0 0 0 0 0
........................................................................................................................................................................................................CCTCGAGCGTGAGTCCTAG................................ 19 3 20 0.10 2 0 0 0 2 0 0 0
........................................................................................................................................................................................................CCTCGCGAGTGACTCCTAGA............................... 20 0 20 0.10 2 0 2 0 0 0 0 0
......................................TTTTACCACCTCCACTCGGAGTCAT............................................................................................................................................................................................ 25 2 10 0.10 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................CCTCGCGAGTGACTCCTAGG............................... 20 1 20 0.10 2 0 2 0 0 0 0 0
............................................................................................................................................................................................................................CGAGGTGCGTGTACCCAGTGC.......... 21 1 16 0.06 1 0 0 0 0 1 0 0
............................................................................................................................................................................................................................CGAGGTGCGTGTACCCGGTGC.......... 21 2 16 0.06 1 0 0 0 0 1 0 0
...............................................................................................CGTCGGCGACGAAGCATG.......................................................................................................................................... 18 2 17 0.06 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................CGCGAGTGACTCCTAGACGAG........................... 21 0 20 0.05 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TCCTCGCGAGTGACTCCTAG................................ 20 0 20 0.05 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................CGCGAGTGACTCCTAGACGAGGC......................... 23 0 20 0.05 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................CCTCGCGAGTGACTCCTAGAC.............................. 21 0 20 0.05 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................CTCGCGAGTGACTCCTAGAC.............................. 20 0 20 0.05 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................GTCCTCGCGAGTGACTCCT.................................. 19 0 20 0.05 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................CCTCGCGAGTGACTCCTAGACGAGGCG........................ 27 0 20 0.05 1 0 1 0 0 0 0 0
................................................................................................................................................AAAAACGAGGGTTTAAAATCGTTAC.................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 1
.............................................................................................................................................................AAAAATCGTTACTTCTGGTG.......................................................................... 20 2 20 0.05 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TCGCGAGTGACTCCTAGACG............................. 20 0 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_301:14383-14633 + dps_1946 GGGAGGAGCA---------GGAGTCCCCCGAAAGCGACCTTAAAACAACAATGGTGGAGGTGAGCCTCAGAAATGTCACTGACGCTCTTGCTCCTGCAGCCCCTGCAGCTCCTGCTT--CGTACCAACACACTTGCAAAAAAA--------------------------------------------------------------ATGTTGCACTTATTTTTGCTCCAAAATTTTAGCAATGAAGAACACACAGCAGTGAGCCTCGAAGGTCAGGAGCGCTCACTGAGGATCTGCTCCGCGCACATGGGTCACGAACAACCTGA
droPer2 scaffold_64:75524-75731 + GGGAGGAGCC---------GGATTCCCCCGACAGCGATCTAGAAGCAACAATGGTGGAGGTGAGACTCAGGAATGT---------------------------------------------CACTTGCATTCTTGCAAAAAGG--------------------------------------------------------------GAGTTGCACTTATTTTTGCTCCCAAATTTCAGCAATGAAGACCACACCGCAGTGAGTCTCGAAGGCCAGGAGCGCTCACTGAGGATCTGCTCCGCATACATGGGGCATGATCAACCAGA
droGri2 scaffold_14071:502-644 + CG-----------------------------------------------------------------------------------------------------------------------CACCTGCATCCTCGCTAGAAAA--------------------------------------------------------------CATTTAAATATTTTTCTGCTTCATAATTTTAGCAATGCCGACAACACAGCGGTAAGCCTGAAGCTCCAGTCAGCTCCGCTAAGGCTACTGTCTGCCTATATGGCCTACGATAGCGCTGG
droAna3 scaffold_12717:63469-63712 + AGGAGGACTCACTGCTA---GG---CTCCGACACCGAGGCTGAGGTTTCTGTGGTGGAG---AATCTAAAGAATGTCCCTGACATTCCTGA---TGGAGCTGACGCGACCCTCATCC-------AAGAACCCCTGT-------------------------------------------------------------GCACAGCCAATGTTAACATTTTCTTGCTACCAAATTTCAACAATGAAGATCATGTAGCCGCATCGATAGAAGGCCCAGGCGGCCATCTAAGAATATGCTCGGCGTATATGGGTCATGACCAAATAGG
droBip1 scf7180000394979:3993-4242 - AGGACGACCTTCTGCTGAGAGAG-----------------------------------------------------------------------TGGATCTTATGTGACCCTCATCCAGGAACCCTGGATCTTTGGAGAAAGGATTCTTGGGTTGGGGGCGTCGGAATATAGGCTCTGTAAGGCCGACAAAACATGTAAAAGGCGAGCCTTAACCTCTTTTTGGTACCCAATTTCAGCAATAAACACTACGTAGCCGCAA---TAGAGAGCCCAAATGGTTCGCTAAGGGTTTGCTTGGCGTATATGGGCCACGACCAGGATGT
droEle1 scf7180000489457:4491-4635 - TT---------------------------------------------------------------------------------------------------------------------CGAACCTGCATTTTAGCCAAAAGG--------------------------------------------------------------CTCCTTAGCGTATTTCTGTTTCATAATTACAGCAACGGAGACAACACCGTAGCAAGCCTGGAACTTCCAGCGGCTACCATAAGGGTGACTTCAACGTACATGGCCTTCGAAAAGGAGGA
droRho1 scf7180000763020:6416-6524 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTGCTTCGCAACTACAGCAACGGAGACAACACAGCAATAAGCCTGGAGCTGCAAAGCGGCTCTATTAGGATCCTATCGGCCTACATGGCTTTTGAAAAAGTAGA
droTak1 scf7180000415196:12824-12968 + TT---------------------------------------------------------------------------------------------------------------------CGAACCTGCATTTTGGCCAAAAGG--------------------------------------------------------------CAGCTAAATATATTTCTGCTTCAAAATTACAGCAACGGAGATAACACCTCAGTAAGGCTGGAACTCCAGCACGGCTCCATTAGGCTGCTATCGGCCTATATGGCCTTCGAAAAAGAAGA
droYak3 v2_chr2L_random_028:1603540-1603684 + TT---------------------------------------------------------------------------------------------------------------------AGGGCCTGCATTCTAGCCAAAAAG--------------------------------------------------------------CACCTTAGCATTTTTTTGCTCCATAATTACAGCGATCCAGACAAAGCGGCAGCCACCGTGGAGAGTCTGCCATCTCCGTTCCGAGTGCTGTCATCATACATGGCCTACGAAAGGCATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGGAGGAGCA---------GGAGTCCCCCGAAAGCGACCTTAAAACAACAATGGTGGAGGTGAGCCTCAGAAATGTCACTGACGCTCTTGCTCCTGCAGCCCCTGCAGCTCCTGCTT--CGTACCAACACACTTGCAAAAAAA--------------------------------------------------------------ATGTTGCACTTATTTTTGCTCCAAAATTTTAGCAATGAAGAACACACAGCAGTGAGCCTCGAAGGTCAGGAGCGCTCACTGAGGATCTGCTCCGCGCACATGGGTCACGAACAACCTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................TTTAGCAATGAAGAACACACAGCAG...................................................................25149.004902000004700
.......................................................................................................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACAACC...2617.0070700000000
.........................................................................................................................................................................................................................................TTAGCAATGAAGAACACACAGCAG...................................................................2415.0050000000500
....................................................................AGAAATGTCACTGACGCTCTTGC.........................................................................................................................................................................................................................................2315.0050000000500
.............................................................................................................................................................................................................................................CAATGAAGAACACACAGCAGTGAGCCT............................................................2713.0030300000000
.......................................................................................................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACA......2312.0020200000000
............................................................................................................................................................................................................................................................................................TGAGGATCTGCTCCGCGCACATGGG...............2511.0010100000000
..............................................................................................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGCT............................2621.0020200000000
........................................................................................................................................................................................................................................TTTAGCAATGAAGAACACACAGCA....................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................GCAGTGAGCCTCGAAGGT.....................................................1811.0010100000000
..............................................................................................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGC.............................2521.0020200000000
........................................................................................................................................................................................................................................TTTAGCAATGAAGAACACACA.......................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACAA.....2411.0010100000000
................................................................................................................................................................................................................................................TGAAGAACACACAGCAGTGAGCCTC...........................................................2521.0020200000000
........................................................................................................................................................................................................................................TTTAGCAATGAAGAACACACAGCAGT..................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................CACAGCAGTGAGCCTCGAAGGTC....................................................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................TCCGCGCACATGGGTCACGAACAAC....2511.0010100000000
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATC................................21200.65130800003200
...............................................................................................................................................................................................................................................ATGAAGAACACACAGCAGTGAGCC.............................................................2420.5010100000000
................................................................................................................................................................................................................................................TGAAGAACACACAGCAGTGAGCCT............................................................2420.5010100000000
...........................................................GTGAGCCTCAGAAATGTCACTGA..................................................................................................................................................................................................................................................2320.5010100000000
...............................................................................................................................................................................................................................................ATGAAGAACACACAGCAGTGAGCCT............................................................2520.5010100000000
..............................................................................................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCT...............................2320.5010100000000
..............................................................................................................................................................................................................................................................................TCAGGAGCGCTCACTGAGGATCTGCA............................2620.5010100000000
................................................................................................................................................................................................................................................TGAAGAACACACAGCAGTGAGC..............................................................2220.5010010000000
...................................................................................................................................................................................................................................................................................AGCGCTCACTGAGGATCTGC.............................20200.4590700000020
........................................................................................................................................................................................................................................................................................TCACTGAGGATCTGCTCCGC........................20200.3570700000000
......................................................................................................................................................................................................................................................................................GCTCACTGAGGATCTGCTCCG.........................21200.2550400001000
...................................................................................................................................................................................................................................................................................AGCGCTCACTGAGGATCTGCT............................21200.2040400000000
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTG..............................23200.2040400000000
...................................................................................................................................................................................................................................................................................AGCGCTCACTGAGGATCTG..............................19200.2040400000000
.......................................................................................................................................................................................................................................................................................CTCACTGAGGATCTGCTCCG.........................20200.1530300000000
.......................................................................................................................................................................................................................................................................................CTCACTGAGGATCTGCTCCGC........................21200.1530000000210
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTGC.............................24200.1020200000000
...........................................................................................................................................................................................................................................................CAGCAGTGAGCCTCGAAGG......................................................19200.1020200000000
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGG...................................18200.1020200000000
....................................................................................................................................................................................................................................................................................GCGCTCACTGAGGATCTGC.............................19200.1020200000000
.................................................................................................................................................................................................................................................................................GGAGCGCTCACTGAGGATCTG..............................21200.1020100000100
.....................................................................................................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCCG.........................22200.1020200000000
..................................................................................................................................................................................................................................................................................GAGCGCTCACTGAGGATCTGC.............................21200.1020100000100
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTT..............................23200.0510100000000
.................................................................................................................................................................................................................................................................................GGAGCGCTCACTGAGGATCT...............................20200.0510000010000
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCT...............................22200.0510100000000
.....................................................................................................................................................................................................................................................................................CGCTCACTGAGGATCTGC.............................18200.0510100000000
.....................................................................................................................................................................................................................................................................................CGCTCACTGAGGATCTGCTC...........................20200.0510010000000
....................................................................................................................................................................................................................................................................................GCGCTCACTGAGGATCTGCTC...........................21200.0510100000000
.....................................................................................................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCCGC........................23200.0510000100000
...............................................................................................................................................................................................................................................................................CAGGAGCGCTCACTGAGGATCTGCT............................25200.0510100000000
......................................................................................................................................................................................................................................................................................GCTCACTGAGGATCTGCTCC..........................20200.0510100000000
..........................................................................................................................................................................................................................................................................................ACTGAGGATCTGCTCCGC........................18200.0510100000000
.....................................................................................................................................................................................................................................................................................CGCTCACTGAGGATCTGCTCC..........................21200.0510010000000
droPer2
GGGAGGAGCC---------GGATTCCCCCGACAGCGATCTAGAAGCAACAATGGTGGAGGTGAGACTCAGGAATGT---------------------------------------------CACTTGCATTCTTGCAAAAAGG--------------------------------------------------------------GAGTTGCACTTATTTTTGCTCCCAAATTTCAGCAATGAAGACCACACCGCAGTGAGTCTCGAAGGCCAGGAGCGCTCACTGAGGATCTGCTCCGCATACATGGGGCATGATCAACCAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................TTCAGCAATGAAGACCACACCGC.....................................................................23200.50100100000
..................................CGATCTAGAAGCAACAATGGTGGAG.........................................................................................................................................................................................................................................................................25200.357070000
..................................CGATCTAGAAGCAACAATGGTGGA..........................................................................................................................................................................................................................................................................24200.357070000
..................................CGATCTAGAAGCAACAATGGTGGAGG........................................................................................................................................................................................................................................................................26200.357070000
................................................................................................................................................................................................................................................TGAAGACCACACCGCAGTGAGTCT............................................................2430.331010000
.........................................................................................................................................................................................................................................................................................................CGCATACATGGGGCATGATCAACC...24200.255050000
.........................................................................................................................................................................................................................................................................................................CGCATACATGGGGCATGATCAACCA..25200.204040000
.........................................................................................................................................................................................................................................................................................................CGCATACATGGGGCATGATCAAC....23200.204040000
..............................................................................................................................................................................................................................................................................CCAGGAGCGCTCACTGAGGATCTG..............................24200.153030000
............................................................................................................................................................................................................................................................................................TGAGGATCTGCTCCGCATACATGGGG..............26200.153012000
.........................................................................................................................................................................................................................................................................................................CGCATACATGGGGCATGATCA......21200.102020000
.....................................TCTAGAAGCAACAATGGTGGA..........................................................................................................................................................................................................................................................................21200.051010000
.........................................................................................................................................................................................................................................................................................................CGCATACATGGGGCATGATCAA.....22200.051010000
.......GCC---------GGATTCCCCCGACAG..................................................................................................................................................................................................................................................................................................18200.051010000
.............................................................................................................................................................................................................................................................................................GAGGATCTGCTCCGCATACATGG................23200.051010000
............................................................................................................................................................................................................................................................................GGCCAGGAGCGCTCACTGAGGATC................................24200.051010000
..................................CGATCTAGAAGCAACAATGGTG............................................................................................................................................................................................................................................................................22200.051010000
.......................................................................................................................................................................................................................................................................TCGAAGGCCAGGAGCGCTCACTGA.....................................24200.051010000
............................CGACAGCGATCTAGAAGCA.....................................................................................................................................................................................................................................................................................19200.051000001
......................................CTAGAAGCAACAATGGTGGAG.........................................................................................................................................................................................................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................TCACTGAGGATCTGCTCCG.........................19200.051001000
............................................................................................................................................................................................................................................................................................TGAGGATCTGCTCCGCATACATGGGGC.............27200.051010000
..............................................................................................................................................................................................................................................................................CCAGGAGCGCTCACTGAGG...................................19200.051000001
.....................................TCTAGAAGCAACAATGGTGGAGG........................................................................................................................................................................................................................................................................23200.051010000
..............................................................................................................................................................................................................................................................................CCAGGAGCGCTCACTGAGGATCTGC.............................25200.051010000
..............................................................................................................................................................................................................................................................................CCAGGAGCGCTCACTGAGGATCTA..............................24200.051010000
..................................CGATCTAGAAGCAACAATGGT.............................................................................................................................................................................................................................................................................21200.051010000
....................GATTCCCCCGACAGCGATCT............................................................................................................................................................................................................................................................................................20200.051000001
.........................................................................................................................................................................................................................................................................................................CGCATACATGGGGCATGA.........18200.051010000
...................................GATCTAGAAGCAACAATGGTGG...........................................................................................................................................................................................................................................................................22200.051010000
...................................GATCTAGAAGCAACAATGGTGGAGG........................................................................................................................................................................................................................................................................25200.051010000
..............................................................................................................................................................................................................................................................................CCAGGAGCGCTCACTGAGGATCTGCT............................26200.051000001
..................................CGATCTAGAAGCAACAATGGTGGAGGT.......................................................................................................................................................................................................................................................................27200.051010000
droGri2
CG-----------------------------------------------------------------------------------------------------------------------CACCTGCATCCTCGCTAGAAAA--------------------------------------------------------------CATTTAAATATTTTTCTGCTTCATAATTTTAGCAATGCCGACAACACAGCGGTAAGCCTGAAGCTCCAGTCAGCTCCGCTAAGGCTACTGTCTGCCTATATGGCCTACGATAGCGCTGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AGGAGGACTCACTGCTA---GG---CTCCGACACCGAGGCTGAGGTTTCTGTGGTGGAG---AATCTAAAGAATGTCCCTGACATTCCTGA---TGGAGCTGACGCGACCCTCATCC-------AAGAACCCCTGT-------------------------------------------------------------GCACAGCCAATGTTAACATTTTCTTGCTACCAAATTTCAACAATGAAGATCATGTAGCCGCATCGATAGAAGGCCCAGGCGGCCATCTAAGAATATGCTCGGCGTATATGGGTCATGACCAAATAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......CTCACTGCTA---GG---CTCCGACACCGA...............................................................................................................................................................................................................................................................................................24202.45494900000
.......CTCACTGCTA---GG---CTCCGACACCGAGGC............................................................................................................................................................................................................................................................................................27201.10222200000
.......CTCACTGCTA---GG---CTCCGACACC.................................................................................................................................................................................................................................................................................................22200.80160160000
.......CTCACTGCTA---GG---CTCCGACACCGAG..............................................................................................................................................................................................................................................................................................25200.60121110000
....................................................................................TTCCTGA---TGGAGCTGACGCGACC......................................................................................................................................................................................................................2320.501001000
.....GACTCACTGCTA---GG---CTCCGACACC.................................................................................................................................................................................................................................................................................................24200.357520000
...............................................................................................................TCATCC-------AAGAACCCCTGT-------------------------------------------------------------GCACAGC........................................................................................................................2540.251100000
..........................................................................GTCCCTGACATTCCTGA---TGGAGCTGA.............................................................................................................................................................................................................................2640.251100000
...........................................................................................................ACCCTCATCC-------AAGAACCCCTGT-------------------------------------------------------------GCACA..........................................................................................................................2740.251010000
........TCACTGCTA---GG---CTCCGACACCGA...............................................................................................................................................................................................................................................................................................23200.255500000
...............................................................................................................TCATCC-------AAGAACCCCTGT-------------------------------------------------------------GCACAGCCAA.....................................................................................................................2840.251100000
.......CTCACTGCTA---GG---CTCCGACAC..................................................................................................................................................................................................................................................................................................21200.204220000
........TCACTGCTA---GG---CTCCGACACCGAGG.............................................................................................................................................................................................................................................................................................25200.153300000
..GAGGACTCACTGCTA---GG---CTCCG......................................................................................................................................................................................................................................................................................................22200.153300000
........................................................................................................................................................................................................................................................................................................CGGCGTATATGGGTCATGACC.......21200.153200001
......ACTCACTGCTA---GG---CTCCGACACC.................................................................................................................................................................................................................................................................................................23200.153300000
.......CTCACTGCTA---GG---CTCCGACACCGAGGCT...........................................................................................................................................................................................................................................................................................28200.153300000
...................................................................................................................................................................................................................................................................TCGATAGAAGGCCCAGGCGGCCATC........................................25200.153210000
......ACTCACTGCTA---GG---CTCCGACAC..................................................................................................................................................................................................................................................................................................22200.102110000
.................................................................................................................................................................................................................................................................CATCGATAGAAGGCCCAGGCGG.............................................22200.102200000
........TCACTGCTA---GG---CTCCGACACC.................................................................................................................................................................................................................................................................................................21200.102200000
.......CTCACTGCTA---GG---CTCCGACACCGAGGCA...........................................................................................................................................................................................................................................................................................28200.102200000
.................................................................................................................................................................................................................................................................CATCGATAGAAGGCCCAGGC...............................................20200.102200000
....GGACTCACTGCTA---GG---CTCCGA.....................................................................................................................................................................................................................................................................................................21200.051100000
................A---GG---CTCCGACACCGAGGCTGAGG.......................................................................................................................................................................................................................................................................................23200.051100000
.........CACTGCTA---GG---CTCCGACACCGA...............................................................................................................................................................................................................................................................................................22200.051100000
..................................................................................................................................................................................................................................................................ATCGATAGAAGGCCCAGGCGGC............................................22200.051010000
.................................................................................................................................................................................................................................................................CATCGATAGAAGGCCCAGGCTT.............................................22200.051000001
...............................................................................................................................................................................................................................................................CGCATCGATAGAAGGCCCAGGCGGCCA..........................................27200.051010000
........................................................................................................................................................................................................................................................ATGTAGCCGCATCGATAGAAGG......................................................22200.051000010
.....GACTCACTGCTA---GG---CTCCGACACCGAGGC............................................................................................................................................................................................................................................................................................29200.051010000
.....GACTCACTGCTA---GG---CTCCGACACCGAG..............................................................................................................................................................................................................................................................................................27200.051010000
....GGACTCACTGCTA---GG---CTCCGACACCG................................................................................................................................................................................................................................................................................................26200.051100000
...................................................................................................................................................................................................................................................................................................ATGCTCGGCGTATATGGGTCA............21200.051100000
...............TA---GG---CTCCGACACCGAGGCTGAGGTT.....................................................................................................................................................................................................................................................................................26200.051100000
..........................................................................................................................................................................................................................................................GTAGCCGCATCGATAGAAGGC.....................................................21200.051000010
..................................................................................................................................................................................................................................................................ATCGATAGAAGGCCCAGGCGGCCATC........................................26200.051100000
.................................................................................................................................................................................................................................................................CATCGATAGAAGGCCCAGGCGGCC...........................................24200.051100000
..........................TCCGACACCGAGGCTGAGGTT.....................................................................................................................................................................................................................................................................................21200.051000010
.....................G---CTCCGACACCGAGGCTGAGG.......................................................................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................................................................................CCCAGGCGGCCATCTAAGAATATGC.............................25200.051001000
................................................................................................................................................................................................................................................................................CAGGCGGCCATCTAAGAATATGCTCGGC........................28200.051010000
............TGCTA---GG---CTCCGACACCGAG..............................................................................................................................................................................................................................................................................................20200.051100000
..................................................................................................................................................................................................................................................................ATCGATAGAAGGCCCAGG................................................18200.051100000
........................................................................................................................................................................................................................................................ATGTAGCCGCATCGATAGAAG.......................................................21200.051000010
..................................................................................................................................................................................................................................................................ATCGATAGAAGGCCCAGGCG..............................................20200.051100000
........TCACTGCTA---GG---CTCCGACACCGAGGCTG..........................................................................................................................................................................................................................................................................................28200.051100000
.................................................................................................................................................................................................................................................................CATCGATAGAAGGCCCAGGCG..............................................21200.051100000
..................................................................................................................................................................................................................................................................ATCGATAGAAGGCCCAGGC...............................................19200.051100000
.........................................................................................................................................................................................................................................................TGTAGCCGCATCGATAGAAGG......................................................21200.051100000
..........ACTGCTA---GG---CTCCGACACCGA...............................................................................................................................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................................................TGAAGATCATGTAGCCGCATC...............................................................21200.051000001
..........ACTGCTA---GG---CTCCGACACCG................................................................................................................................................................................................................................................................................................20200.051100000
............................................................................................................................................................................................................................................................AGCCGCATCGATAGAAGGCCCAGGC...............................................25200.051000001
.GGAGGACTCACTGCTA---GG---CTCCGA.....................................................................................................................................................................................................................................................................................................24200.051100000
droBip1
AGGACGACCTTCTGCTGAGAGAG-----------------------------------------------------------------------TGGATCTTATGTGACCCTCATCCAGGAACCCTGGATCTTTGGAGAAAGGATTCTTGGGTTGGGGGCGTCGGAATATAGGCTCTGTAAGGCCGACAAAACATGTAAAAGGCGAGCCTTAACCTCTTTTTGGTACCCAATTTCAGCAATAAACACTACGTAGCCGCAA---TAGAGAGCCCAAATGGTTCGCTAAGGGTTTGCTTGGCGTATATGGGCCACGACCAGGATGTSizeHit CountTotal NormTotal
No Reads
droEle1
TT---------------------------------------------------------------------------------------------------------------------CGAACCTGCATTTTAGCCAAAAGG--------------------------------------------------------------CTCCTTAGCGTATTTCTGTTTCATAATTACAGCAACGGAGACAACACCGTAGCAAGCCTGGAACTTCCAGCGGCTACCATAAGGGTGACTTCAACGTACATGGCCTTCGAAAAGGAGGASizeHit CountTotal NormTotal
No Reads
droRho1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTGCTTCGCAACTACAGCAACGGAGACAACACAGCAATAAGCCTGGAGCTGCAAAGCGGCTCTATTAGGATCCTATCGGCCTACATGGCTTTTGAAAAAGTAGASizeHit CountTotal NormTotal
No Reads
droTak1
TT---------------------------------------------------------------------------------------------------------------------CGAACCTGCATTTTGGCCAAAAGG--------------------------------------------------------------CAGCTAAATATATTTCTGCTTCAAAATTACAGCAACGGAGATAACACCTCAGTAAGGCTGGAACTCCAGCACGGCTCCATTAGGCTGCTATCGGCCTATATGGCCTTCGAAAAAGAAGASizeHit CountTotal NormTotal
No Reads
droYak3
TT---------------------------------------------------------------------------------------------------------------------AGGGCCTGCATTCTAGCCAAAAAG--------------------------------------------------------------CACCTTAGCATTTTTTTGCTCCATAATTACAGCGATCCAGACAAAGCGGCAGCCACCGTGGAGAGTCTGCCATCTCCGTTCCGAGTGCTGTCATCATACATGGCCTACGAAAGGCATGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................CATCATACATGGCCTACGAAAGGCAT..2611.00101000000000
.......................................................................................................................................................................................................................................................................................................TCATCATACATGGCCTACGAAAGGCAT..2711.00101000000000
.......................................................................................................................................................................................................................................................................................................TCATCATACATGGCCTACGAAAGGCA...2690.44404000000000
.....................................................................................................................................................................................................................................................................................TCTCCGTTCCGAGTGCTGTCATCATACA...................2860.17101000000000
.......................................................................................................................................................................................................................................................................................................TCATCATACATGGCCTACGAAAGGC....2590.11101000000000
.......................................................................................................................................................................................................................................................................................................TCATCATACATGGCCTACGAAAGGCAC..2790.11101000000000
.......................................................................................................................................................................................................................................................................................................TCATCATACATGGCCTACGAAAG......2390.11101000000000
.................................................................................................................................TTCTAGCCAAAAAG--------------------------------------------------------------CACCTTAGCATT...........................................................................................................26110.09101000000000

Generated: 05/18/2015 at 02:14 AM