ID:

dps_1932

 Coordinate:

Unknown_group_270:8759-8909 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.5 -20.5 -20.4

Flybase annnotation

CDS [Dpse\GA22419-cds]; exon [dpse_GLEANR_10414:2]; intron [Dpse\GA22419-in]

Repeatable elements

NameClassFamilyStrand
DMCR1ALINECR1+
mature
star
  1. dps_1932  Unknown_group_270:8767-8783 +
  2. XL_group1a:1052165-1052181 -
  3. Unknown_singleton_3538:35-51 -
  4. Unknown_singleton_3273:2405-2421 +
  5. Unknown_singleton_701:2035-2051 +
  6. Unknown_group_554:4178-4194 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGGCTCACTATACAATATTTGGTGGTTCTCTTGAGAGAATTACCCTTGTGGATGATCTGGGTGTTATGTTAGATTCCAAGTTAAACTTTTCTGAACACATTTCTACAATGGTTAATAAGGCCATGGGCGTGCTTGCGTTTATATAGAAGTGGATTAGCCAAAAAGGTGGAGGGGATGTTCGATCGAGAGTGCTGCCAAAGACACTCCGGCAAGCAAGCGGCAACGCGGGCCTAAGGTGGCCACCCCCCTG
**********************************************************...((((....(((((................)))))))))..((((((..((((((((....((((((((((....))))))........)))))))))))).....))))))******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 V112
male body		 M062
head
 GSM444067
head
 GSM343916
embryo
........................................................................................................................................................................................................................AGCGGAAACGCGGGCCTG................. 18 2 2 6.00 12 12 0 0 0 0 0 0
.................................................................................................................................................................................................TGCCAAAGACACTCCGGCAAGCAAGCGG.............................. 28 0 1 4.00 4 0 3 1 0 0 0 0
.......................................................................................................................................................................................................................CAGCGGAAACGCGGGCCT.................. 18 2 5 3.80 19 19 0 0 0 0 0 0
..........................................ACCCTTGTGGATGATCTGGG............................................................................................................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0
.................................GAGAGAATTACCCTTGTGGATGATC................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................AGTGGATTAGCCAAAAAGGTGGAG............................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
......................................................................................................................................TGCGTTTATATAGAAGTGGATTAGC............................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................TGTGGATGATCTGGGTGTTT........................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................TGGGTGTTATGTTAGAT................................................................................................................................................................................ 17 0 6 0.83 5 0 0 5 0 0 0 0
........................................................................................................................................................................................................................AGCGGAAACGCGGGCCTGG................ 19 3 18 0.67 12 11 0 0 0 1 0 0
..........................................................................................TCTGAACACATTTCTACAATGGT.......................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................AAGACACTCCGGCAAGCAAGCGG.............................. 23 0 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................AAAGACACTCCGGCAAGCAAGCGGCAA........................... 27 0 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................AAAGACACTCCGGCAAGCAAGCGG.............................. 24 0 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................AAAGACACTCCGGCAAGCAAGCGGCA............................ 26 0 2 0.50 1 0 1 0 0 0 0 0
................................................GTGGATGATCTGGGTGTTATG...................................................................................................................................................................................... 21 0 20 0.35 7 5 2 0 0 0 0 0
...................................................GATGATCTGGGTGTTATGTTAAAATT.............................................................................................................................................................................. 26 3 4 0.25 1 0 0 0 1 0 0 0
...................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGAC................................................ 24 0 15 0.20 3 3 0 0 0 0 0 0
.....................................................TGATCTGGGTGTTATGTTAG.................................................................................................................................................................................. 20 0 20 0.20 4 4 0 0 0 0 0 0
.................................................TGGATGATCTGGGTGTTATG...................................................................................................................................................................................... 20 0 20 0.20 4 2 0 2 0 0 0 0
..........ATAAAATATTTGGAGGGTCTC............................................................................................................................................................................................................................ 21 3 6 0.17 1 0 0 0 1 0 0 0
.................................................TGGATGATCTGGGTGTTATGTTAGAT................................................................................................................................................................................ 26 0 6 0.17 1 0 1 0 0 0 0 0
....................................................................................................................TAAGGCCATGGGCGTGCTT.................................................................................................................... 19 0 20 0.15 3 3 0 0 0 0 0 0
.................................................TGGATGATCTGGGTGTTATGTTAG.................................................................................................................................................................................. 24 0 20 0.15 3 0 3 0 0 0 0 0
.....................................................................................................................................................................................................................GCAAGCGGCAACGCGGGCC................... 19 0 20 0.15 3 3 0 0 0 0 0 0
........................................................TCTGGGTGTTATGTTAGTT................................................................................................................................................................................ 19 1 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................................TAAGGCCATGGGCGTGCTTCCCC................................................................................................................ 23 3 7 0.14 1 0 0 0 0 1 0 0
................TATTTGGTGGTTCTCTTGAGAG..................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0
.................ATTTGGTGGTTCTCTTGAGAGA.................................................................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0 0 0 0
....................................................ATGATCTGGGTGTTATGTTAG.................................................................................................................................................................................. 21 0 20 0.10 2 1 0 0 1 0 0 0
...................................................................................................................ATAAGGCCATGGGCGTGCTT.................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0
...................................................................................................................ATAAGGCCATGGGCGTGCTTG................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0
.........................................................CTGGGTGTTATGTTAGA................................................................................................................................................................................. 17 0 20 0.10 2 0 0 2 0 0 0 0
...........TAAAATATTTGGAGGGTCTC............................................................................................................................................................................................................................ 20 3 11 0.09 1 1 0 0 0 0 0 0
.................................................................................TCAAACTGTTCTGAAGACAT...................................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 0 0 1
...................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGA................................................. 23 0 15 0.07 1 1 0 0 0 0 0 0
...................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGACA............................................... 25 0 15 0.07 1 1 0 0 0 0 0 0
............................................................................................................................................................AGCCAAAAAGGTTAAGGG............................................................................. 18 2 16 0.06 1 1 0 0 0 0 0 0
...................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAG.................................................. 22 0 17 0.06 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................TGCTGCCAAAGACACTCCGG......................................... 20 0 18 0.06 1 1 0 0 0 0 0 0
...................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAA................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0
....................TGGTGGTTCTCTTGAGAGAAT.................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0
....................................................ATGATCTGGGTGTTATGTTA................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0 0
....................TGGTGGTTCTCTTGAGAGA.................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0
.................................................CGGATGATCTGGGTGTTATGTTAGA................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0
..................................................GGATGGTCTGGGTGTTGTGTT.................................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0
...................TTGGTGGTTCTCTTGAGAGAA................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0
.................................................TGGATGATCTGGGTGTTATGTT.................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0
..................................................GGATGATCTGGGTGTTATG...................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0 0 0
...................................................GATGATCTGGGTGTTATG...................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0 0
...................TTGGTGGTTCTCTTGAGAGAATT................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0
...................................................GATGATCTGGGTGTTATGTT.................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 1 0
....................................................ATGATCTGGGTGTTATGTTAGA................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0
...................................................................................................................................................................................TCGATCGAGAGTGCTGCCAA.................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGGTCCTAAGGTAGCGAC....... 18 3 20 0.05 1 1 0 0 0 0 0 0
................................................GTGGATGATCTGGGTGTT......................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0
................TATTTGGTGGTTCTCTTGAGAGAAT.................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................AATAAGGCCATGGGCGTGCTT.................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0
.................................................TGGATGATCTGGGTGTTATGT..................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0
.....................................................................................................................AAGGCCATGGGCGTGCTTG................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

AACCGAGTGATATGTTATAAACCACCAAGAGAACTCTCTTAATGGGAACACCTACTAGACCCACAATACAATCTAAGGTTCAATTTGAAAAGACTTGTGTAAAGATGTTACCAATTATTCCGGTACCCGCACGAACGCAAATATATCTTCACCTAATCGGTTTTTCCACCTCCCCTACAAGCTAGCTCTCACGACGGTTTCTGTGAGGCCGTTCGTTCGCCGTTGCGCCCGGATTCCACCGGTGGGGGGAC
*******************************************************************************...((((....(((((................)))))))))..((((((..((((((((....((((((((((....))))))........)))))))))))).....))))))********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902010
ovaries
 GSM343916
embryo
 V112
male body		 M062
head
 SRR902011
testis
 SRR902012
CNS imaginal disc
...............................................AGACCCACTAGACCCACAATACAAT................................................................................................................................................................................... 25 2 2 5.00 10 8 2 0 0 0 0 0 0
........................................................................CTAAGGTTCAATTTGAAAAGACTTGTGT....................................................................................................................................................... 28 0 1 3.00 3 2 1 0 0 0 0 0 0
.................................................................................................................................................................TTTTCCACCTCCCCTACAAGCTAGCT................................................................ 26 0 1 2.00 2 1 0 0 0 0 0 1 0
........................................................................CTAAGGTTCAATTTGAAAAGACTTGTG........................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCACGAACGCAAATAT........................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................CCACCTCCCCTACAAGCTAGCT................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TTCCACCTCCCCTACAAGCTAGCTCT.............................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TTTTCCACCTCCCCTACAAGCTAGCTCT.............................................................. 28 0 1 1.00 1 0 0 0 0 0 1 0 0
........................................................................CTAAGGTTCAATTTGAAAAGACTTGCTT....................................................................................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................CTAAGGTTCAATTTGAAAAGACTT........................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1
..........................................................................AAGGTTCAATTTGAAAAGACTTGTGT....................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
...............................................AGACCCACTAGACCCACAATACAA.................................................................................................................................................................................... 24 2 2 1.00 2 2 0 0 0 0 0 0 0
....................................................................................................AAAGATGTTACCAATTATTCCGGT............................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................AAGACCCACTAGACCCACAATACAATCT................................................................................................................................................................................. 28 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CAAAATAGGTCTCACGACGGTTT................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCATGAACGCAAATAT........................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCACGAACGCAAATA............................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................CGGTTTTTCCACCTCCCCTACAAGCT.................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................AAGACCCACTAGACCCACAATACAAT................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0
...............................................ACACCTACTAGACCCATAATACAAT................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................TTTCCACCTCCCCTACAAGCTAGCTCT.............................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................GGTTCAATTTGAAAAGACTTGTGT....................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................CTCCCCTACAAGCTAGCTCTCACGACG....................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.................TAAACCACCAAGAGAACTCTCTTAAT................................................................................................................................................................................................................ 26 0 20 0.90 18 18 0 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCACGAACGCAAAT............................................................................................................. 24 0 4 0.75 3 3 0 0 0 0 0 0 0
...............................................AGACCCACTAGACCCACAAT........................................................................................................................................................................................ 20 2 2 0.50 1 1 0 0 0 0 0 0 0
...............................................AGACCCACTAGACCCACAATACA..................................................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0
..............................................AAGACCCACTAGACCCACAAGACAAT................................................................................................................................................................................... 26 3 2 0.50 1 0 0 0 1 0 0 0 0
.......................................................................................................................CCGGTACCCGCACGAACGCAAATAT........................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
..............TTATAAACCACCAAGAGAACTCT...................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................................................................TATTCCGGTACCCGCACGAACGCAAAT............................................................................................................. 27 0 4 0.50 2 2 0 0 0 0 0 0 0
........................................................................................................................CGGTACCCGCACGAACGCAAAT............................................................................................................. 22 0 5 0.40 2 1 1 0 0 0 0 0 0
..............................................CAGACCCACTAGACCCACAATACAAT................................................................................................................................................................................... 26 3 5 0.40 2 0 2 0 0 0 0 0 0
...............................................................................TCAGGTTGAAAAGACTTGTGT....................................................................................................................................................... 21 2 3 0.33 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................AAGCTAGCTATCACGACGGTTTTTGT............................................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................TTCCGGTACCCGCACGAACGCAAAT............................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTAGCTCTCACGACGGTTTCTGT............................................... 23 0 16 0.25 4 3 1 0 0 0 0 0 0
.........................................................................................................................GGTACCCGCACGAACGCAAA.............................................................................................................. 20 0 5 0.20 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................CTAGCTCTCACGACGGTTTCTG................................................ 22 0 16 0.19 3 2 1 0 0 0 0 0 0
.....................................................ACTAGACCCACAATACAATCTA................................................................................................................................................................................ 22 0 6 0.17 1 1 0 0 0 0 0 0 0
.................................................ACCCACTAGACCCACAATACAAT................................................................................................................................................................................... 23 1 20 0.15 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGCTCTCACGACGGTTTCTG................................................ 20 0 16 0.13 2 2 0 0 0 0 0 0 0
..................................................................................................................................ACAAACGCTAATATATCTT...................................................................................................... 19 2 9 0.11 1 0 1 0 0 0 0 0 0
...................................................................................................................TATTCCGGTACCCGCACGAAC................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0
................ATAAACCACCAAGAGAACTCTCTTAAT................................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0 0 0
.................TAAACCACCAAGAGAACTCT...................................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0
....................................................................................................................ATTCCGGTACCCGCATGAA.................................................................................................................... 19 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................CCTACTAGACCCATAATACAAT................................................................................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0 0 0
...............................................AGACCCACTAGAACCACAATACAAT................................................................................................................................................................................... 25 3 13 0.08 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................AGCTAGCTCTCACGACGGTTTCTG................................................ 24 0 15 0.07 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CCTAGCTCTCACGACGGTTTCTGT............................................... 24 1 16 0.06 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TAGCTCTCACGACGGTTTCTGT............................................... 22 0 16 0.06 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGCTCTCACGACGGTTTCTGT............................................... 21 0 16 0.06 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................CTCACGACGGTTTCTGTG.............................................. 18 0 18 0.06 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................ACGACGGTTTCTGTGAGGC.......................................... 19 0 18 0.06 1 1 0 0 0 0 0 0 0
...................................................CCACTAGACCCACAATACAAT................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCACGAAC................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0 0 0
..................AAACCACCAAGAGAACTCACTTAATGGG............................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCTCGTTCGCCGTTGCGCCCGGATT................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................ACCCACTAGACCCACAATACAA.................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAATAGCTATCACGACGGT..................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................ATTCCGGTACCCGCACGAAC................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GCTAGCTATCACGACGGT..................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................GTACTAGACCCACAATACAA.................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCACGAACGCAAATATT.......................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................CACCTACTAGACCCACAATA....................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0
................................................GACCCACTAGACCCACAATACAAT................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................AGCTAGCTATCACGACGGT..................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0
..................AAACCACCAAGAGAACTCTCTTAATC............................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................TCCGGTACCCGCATGAAC................................................................................................................... 18 1 20 0.05 1 0 0 0 1 0 0 0 0
.................................................ACCTACTAGACCCATAATACAATCT................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_270:8709-8959 + dps_1932 TTGGC-----T-CACTATACAATATTTGGTGGTTCTCTTGA-----GAGAATTACCCTTGTGGATGATCTGGGTGTTATGTTAGATTCCAAGTTAAACTTTTCTGAACACATTTCTACAATGGTTAATAAGGCCATGGGCGTGCTTGCGTTTATATAGAAGTGGATTAGCCAAAAAGGTGGAGGGGATGTTCGATCGAGAGTGCTGCCAAAGACACTCCGGCAAGCAAGCGGCAACGCGGGCCTAAGGTGGCCACCCCCCTG
droPer2 scaffold_72:26925-27175 + TTGGC-----T-CACTATACAATATTTGGTGGTTCTCTTGA-----GAGAATTACCCTTGTGGATGATCTGGGTGTTATGTTAGATTCCAAGTTAAACTTTTCTGAACACATTTCTACAATGGTTAATAAGGCCATGGGCGTGCTTGCGTTTATATAGAAGTGGATTAGCCAAAAAGGTGGAGGGGATGTTCGATCGAGAGTGCTGCCAAAGACACTCCGGCGAGCAAGCGGCAACGCGGGCCTAAGGTGGCCACCCCCCTG
droWil2 scf2_1100000004968:721862-722046 + CTAGC-----T-CATTACTCTGTTAAGTCTGTTCTGTTAGT-----TTGTGTACCATCGTTCAAAGACTTGGGCGTTATGTTTGACCCAAAACTTTCATTTAATGTTCATATTTCTTCGATTGTCAATAGAGCATGCAGCCTTCTTGGCTTCATTAAACGTTGGGCCAAAGAA---T-TTGATGATCCCTTAGAACAAGA--------------------------------------------------------------
droVir3 scaffold_12891:176477-176638 - CTTGT-----C-AGTTATACAATCGACAATATCCCTTTGCA-----AAGTATACTAACAGTTAAGGATCTCGGCGTTATTTTTGATTCTAAACTATGTTTCAATCTTCACATAGATACCATTGTTAATGAGGCAAAAGGTGTACTTGGATTCATTAAGCGATTGTCTAAAGAG-----------------------------------------------------------------------------------------
droMoj3 scaffold_4402:929-1083 - ATTGT-----T-GATTATAAAATTAGCAATATTTCCTTACG-----ACGCATCTTTACAGTCAAAGATCTTGGTGTGTTCGTTGACTGTCAACTTAACTTTAATCTTCATATTTCTACCATCATTAATGAAGCCAAAAGTGTGCTTTGCTTTATTAAACGTTGGTT------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:24388512-24388611 + TT-GT-----T-AGTTACACGCTCGATGGGAGGCCACTTGA-----TAGACTGAATGATGTAAATTATTTAGGT-TTACTCTGGATCATCGGTTAAAATTTGATGGTCATATT-----------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13260:833645-833846 + CAGGC-----T-TCGTACAATCTCTCTGGGATTGCCTTAGA-----AAAATTAGCTCAGGTTAATGATCTTGGTGTCCTCTTAGACATAAAACTTAAATTTTCCGACCATATTTCTTCAATGGTTAATAAGGCTAAAGGTGTTGTCGGTTTTATTAAAAGATGGGCTAAGGAA---TTTAACGGTGATGT-AGATAGCCAGCACTTACTAAGACGCT---------------------------------------------
droBip1 scf7180000395658:5728-5900 - CAGGC-----T-CTCTATACTCTTTACGGGATTGCCTTAGA-----AAAATTAGCTCAAGTTAATGATCTCGGCATCCTAATAGACTCGAATTTTAAATTTGCCGACCATATTTCCACAATGGTTAATAAGGCTTAAGGAGTCCTTGGTTTTATTAGAGGAATATAAACTAAT------AGAAGGAATAT------------------------------------------------------------------------
droKik1 scf7180000300461:15859-16035 - TTTGC-----A-ACTTATATGCTAAATAATTGCGCTCTTGA-----AAGAATATCTCTTGTTGATGATTTAGGCGTTCGCTTAGACCCTAAACTTTCGTTCTCTGAAAATATTTCGTGCATGGTTCATAAAGCCAAAGGCATGCTCGGTTTTATTAAGAGGTGGTCGAAGGAA--GGAAGGAGGGGGCGT------------------------------------------------------------------------
droFic1 scf7180000452231:11430-11598 + CGGGG-----G-GCTTACACTTTAAGTGGGTGATCTTTGAATAGAACAGAATAACTCAGGTGGATGACCTTGGTGTTCTTCCGGACCCAAAATTAAAATTTTCTGTCCATATTTCGTCTATGGTGAATAAAGCCAGGAGTGTGCTTGGATTTATAAAAAAATAAATAACTAAA--AA-------------------------------------------------------------------------------------
droEle1 scf7180000487274:21199-21380 - TGCGT-----G-ACTTACACTCTAAGTGACTGCTCTTTAAA-----TAGAATTGCTTTTGTAAACGATCTTAGCGTCCTTTTTAACCCAAAACTGAAGTTTTCCGATTACGTTAAAGATA----CGATAAAGCTAGGGGTGTGGTTGGTCTTATTAAAAGGTGTGA-AGGGAA---T-----------TTGAGGTTGACTGGGTTATCAAGG--------------------------------------------------
droRho1 scf7180000777096:1510-1672 + TACGC-----G-ACTTACACGTTAAGTGGCAGCTCTTTGGA-----TAGAATAACTCTTGTAAACGATCTTGGCGTTCTCTTGGACCCTAAACTAAAATTTTCTAATCACATTTCGTCCATGGTTAATAAAGCCAGAGGAGTGCTTGGATTTATTAAAAGGTGGTCAAAAAAA---T-------------------------------------------------------------------------------------
droBia1 scf7180000297386:12372-12521 + TC--------A-ACTTATACTTTGAGCGGTTGTGTGTTAGA-----TAGAATAACGCATGCTGACGACCTTGGAGTCTATATGGATCCTAAACTTAAATTTTCTGATCACATTACTACCATGGTAAGTAAAGTCAGGGGCGTGCTTGCATATATCAAAAGGTGG--------------------------------------------------------------------------------------------------
droTak1 scf7180000413564:21482-21639 - CTCACTATTCA-ACTTATACTTTGAGCGGTTGTGTGTTAGA-----TAGAATAACGCATGCTGACGACCTTGGAGTCTATATGGATGCCAAACTTAAATTTTCTGATCACATTACTACCATGGTAAATAAAGCCAGGGGCGTGCTTGCATTTATCAAAAGGTGG--------------------------------------------------------------------------------------------------
droEug1 scf7180000409244:9500-9667 - TCTAC-----CCATTTACATCCTGCATGGTGTAGCTCTGGA-----AAGAATTAAGGCAGTCGAAGATCTTGGCATCTTACTCGATTCAAAAGTTAAATTTTCCGACCACATTTCCTATATGGTTAATAAAGCCAAAGGTGTGCTTGGTTTTACGTAGAGACGTACGCCAGAA--GACTG----------------------------------------------------------------------------------
dm3 chr2RHet:633023-633180 + CGAAC-----G-ACTTACACTCTAAGTAAGTGCGCTTTGG------CAAAATAACACGGGTTGATGAACTTGGTGTTCTTCTGGAGCCTAAACTAAAATTTTCTGACCATATTTCGACTATTGTCAATAAGGCCAGGGGTGTGCTTGTTTATATAAAAAGGTAGTCAAAA--------------------------------------------------------------------------------------------
droSim2 2r:872266-872427 + CGCAC-----G-ACTTACACTCTAAGTGGGTGCCCTTTGGA-----CAGAATAACACGGGTTGATGATCTTGGGGTTCTTCTGGACCCTAAACTAAAATTTTCTGACCATATTTCGTCGATTGTCAATAAGGCCAGGGGTGTGCTTGTTTTTATAAAAAGGTGATCTACAAAA-----------------------------------------------------------------------------------------
droSec2 scaffold_372:10300-10461 + CGCAC-----G-ACTTACACTCTAAGTGGCTGCTCTCTGGA-----CAGAATAACACGAGTTGATGATCTTGGTGTTCTTCTGGACCCAAAACTAAAATTTTCTGACCATATTTCGTCTATTGTCAATAAGGCCAGGGGTGTGCTTGGTTTTATAAAAAGGTGGTCTAACGAA-----------------------------------------------------------------------------------------
droYak3 v2_chr3R_random_001:17093-17245 + CACGC-----G-ACTTACACTTTAAGTGGGTGCTCTTTGGA-----CAGAATAAAACATGTTGATGATCTTGGTGTTTTTCTGGACCCTAAAATAAAATTTTCAGACCATATTTCGTCTATTGTCAATAAGGCCAGGGGTGTGCTTGGTTTTATATAACGGTGG--------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:24370161-24370313 + TCAAC-----C-CAAAACGCTCTAAGTGGGTGCTCTTTGAA-----CAGAATAACACGTGTTAATGATCTTGGTGTTCTTCTAGACCCTAAACTAAAAATTTCAGACCATATTTCGTCTATTGTCAATAAGGCCAGGGGTGTGCTTGGTTTTATAAAAAGGTGG--------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTGGC-----T-CACTATACAATATTTGGTGGTTCTCTTGA-----GAGAATTACCCTTGTGGATGATCTGGGTGTTATGTTAGATTCCAAGTTAAACTTTTCTGAACACATTTCTACAATGGTTAATAAGGCCATGGGCGTGCTTGCGTTTATATAGAAGTGGATTAGCCAAAAAGGTGGAGGGGATGTTCGATCGAGAGTGCTGCCAAAGACACTCCGGCAAGCAAGCGGCAACGCGGGCCTAAGGTGGCCACCCCCCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................TGCCAAAGACACTCCGGCAAGCAAGCGG..............................2814.0040000000130
.....................................................ACCCTTGTGGATGATCTGGG.............................................................................................................................................................................................2012.0020000000020
.......................................GA-----GAGAATTACCCTTGTGGATGATC.................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................AGTGGATTAGCCAAAAAGGTGGAG...............................................................................2411.0010000001000
.................................................................................................................................................TGCGTTTATATAGAAGTGGATTAGC............................................................................................2511.0010100000000
..........................................................TGTGGATGATCTGGGTGTTT........................................................................................................................................................................................2011.0010100000000
.....................................................................TGGGTGTTATGTTAGAT................................................................................................................................................................................1760.8350000000500
.....................................................................................................TCTGAACACATTTCTACAATGGT..........................................................................................................................................2320.5010100000000
.................................................................................................................................................................................................................AAGACACTCCGGCAAGCAAGCGG..............................2320.5010000000100
................................................................................................................................................................................................................AAAGACACTCCGGCAAGCAAGCGGCAA...........................2720.5010000000100
................................................................................................................................................................................................................AAAGACACTCCGGCAAGCAAGCGG..............................2420.5010000000100
................................................................................................................................................................................................................AAAGACACTCCGGCAAGCAAGCGGCA............................2620.5010000000010
...........................................................GTGGATGATCTGGGTGTTATG......................................................................................................................................................................................21200.3570500000020
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGAC................................................24150.2030300000000
................................................................TGATCTGGGTGTTATGTTAG..................................................................................................................................................................................20200.2040400000000
............................................................TGGATGATCTGGGTGTTATG......................................................................................................................................................................................20200.2040200000200
............................................................TGGATGATCTGGGTGTTATGTTAGAT................................................................................................................................................................................2660.1710000000010
...............................................................................................................................TAAGGCCATGGGCGTGCTT....................................................................................................................19200.1530300000000
............................................................TGGATGATCTGGGTGTTATGTTAG..................................................................................................................................................................................24200.1530000000030
................................................................................................................................................................................................................................GCAAGCGGCAACGCGGGCC...................19200.1530300000000
......................TATTTGGTGGTTCTCTTGA-----GAG.....................................................................................................................................................................................................................22200.1020200000000
.......................ATTTGGTGGTTCTCTTGA-----GAGA....................................................................................................................................................................................................................22200.1020000000020
...............................................................ATGATCTGGGTGTTATGTTAG..................................................................................................................................................................................21200.1020100001000
..............................................................................................................................ATAAGGCCATGGGCGTGCTT....................................................................................................................20200.1020200000000
..............................................................................................................................ATAAGGCCATGGGCGTGCTTG...................................................................................................................21200.1020200000000
....................................................................CTGGGTGTTATGTTAGA.................................................................................................................................................................................17200.1020000000200
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGA.................................................23150.0710100000000
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGACA...............................................25150.0710100000000
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAG..................................................22170.0610100000000
.........................................................................................................................................................................................................TGCTGCCAAAGACACTCCGG.........................................20180.0610100000000
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAA...................................................21190.0510100000000
..........................TGGTGGTTCTCTTGA-----GAGAAT..................................................................................................................................................................................................................21200.0510100000000
...............................................................ATGATCTGGGTGTTATGTTA...................................................................................................................................................................................20200.0510001000000
..........................TGGTGGTTCTCTTGA-----GAGA....................................................................................................................................................................................................................19200.0510100000000
.........................TTGGTGGTTCTCTTGA-----GAGAA...................................................................................................................................................................................................................21200.0510100000000
............................................................TGGATGATCTGGGTGTTATGTT....................................................................................................................................................................................22200.0510100000000
.............................................................GGATGATCTGGGTGTTATG......................................................................................................................................................................................19200.0510000001000
..............................................................GATGATCTGGGTGTTATG......................................................................................................................................................................................18200.0510000001000
.........................TTGGTGGTTCTCTTGA-----GAGAATT.................................................................................................................................................................................................................23200.0510100000000
..............................................................GATGATCTGGGTGTTATGTT....................................................................................................................................................................................20200.0510000010000
...............................................................ATGATCTGGGTGTTATGTTAGA.................................................................................................................................................................................22200.0510000000010
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAA....................................................20200.0510100000000
...........................................................GTGGATGATCTGGGTGTT.........................................................................................................................................................................................18200.0510100000000
......................TATTTGGTGGTTCTCTTGA-----GAGAAT..................................................................................................................................................................................................................25200.0510100000000
.............................................................................................................................AATAAGGCCATGGGCGTGCTT....................................................................................................................21200.0510100000000
............................................................TGGATGATCTGGGTGTTATGT.....................................................................................................................................................................................21200.0510000010000
................................................................................................................................AAGGCCATGGGCGTGCTTG...................................................................................................................19200.0510000010000
droPer2
TTGGC-----T-CACTATACAATATTTGGTGGTTCTCTTGA-----GAGAATTACCCTTGTGGATGATCTGGGTGTTATGTTAGATTCCAAGTTAAACTTTTCTGAACACATTTCTACAATGGTTAATAAGGCCATGGGCGTGCTTGCGTTTATATAGAAGTGGATTAGCCAAAAAGGTGGAGGGGATGTTCGATCGAGAGTGCTGCCAAAGACACTCCGGCGAGCAAGCGGCAACGCGGGCCTAAGGTGGCCACCCCCCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................TGA-----GAGAATTACCCTTGTGGAT.....................................................................................................................................................................................................2220.501010000
.....................................TTGA-----GAGAATTACCCTTGTGGAT.....................................................................................................................................................................................................2320.501010000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGCAAGCG...............................26200.408080000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGCAAGCGG..............................27200.408080000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGCAAG.................................24200.357070000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGC....................................21200.204040000
...............................................................................................................................TAAGGCCATGGGCGTGCTTGCGT................................................................................................................2380.131000001
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGCAAGCGGC.............................28200.102020000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGCA...................................22200.102020000
.........................................................................................................................................................................................................TGCTGCCAAAGACACTCCGGC........................................21200.051010000
.................................................................GATCTGGGTGTTATGTTAGA.................................................................................................................................................................................20200.051000001
..............................................................................................................................................................................................................CCAAAGACACTCCGGCGAG.....................................19200.051010000
........................................................................................................................................................................................................................TCCGGCGAGCAAGCGGCAACG.........................21200.051010000
.............................................................................................................................................................................................................................CGAGCAAGCGGCAACGCGGG.....................20200.051010000
...................................................................................................................................................................................................................GACACTCCGGCGAGCAAGCGGCAAC..........................25200.051010000
..............................................................................................................................................................................................TCGATCGAGAGTGCTGCCAAAGACA...............................................25200.051010000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAG.....................................20200.051010000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGAGCAC..................................23200.051010000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGT......................................19200.051010000
.............................................................................................................................................................................................................GCCAAAGACACTCCGGCGA......................................19200.051010000
.............................................................GGATGATCTGGGTGTTATGT.....................................................................................................................................................................................20200.051000001
...............................................................................................................................TAAGGCCATGGGCGTGCTTG...................................................................................................................20200.051010000
..............................................................................................................................................................................................................CCAAAGACACTCCGGCGAGCAAG.................................23200.051000100
droWil2
CTAGC-----T-CATTACTCTGTTAAGTCTGTTCTGTTAGT-----TTGTGTACCATCGTTCAAAGACTTGGGCGTTATGTTTGACCCAAAACTTTCATTTAATGTTCATATTTCTTCGATTGTCAATAGAGCATGCAGCCTTCTTGGCTTCATTAAACGTTGGGCCAAAGAA---T-TTGATGATCCCTTAGAACAAGA--------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................TCAATAGAGCATGCAGCCTTCTTGG..................................................................................................................25201.1022000220
.........................................................................................................................TGTCAATAGAGCATGCAGCCTTCT.....................................................................................................................24200.6012012000
..........................................................................................................................................................TAAACGTTGGGCCAAAGAA---T-T...................................................................................21200.45909000
............................................................................................................................CAATAGAGCATGCAGCCTTCTTGG..................................................................................................................24200.25500050
.........................................................................................................................TGTCAATAGAGCATGCAGCCTTCTTG...................................................................................................................26200.20400040
...................................GTTAGT-----TTGTGTACCATCGTT.........................................................................................................................................................................................................2160.17101000
.....................................TAGT-----TTGTGTACCATCGTTCAAAGACT.................................................................................................................................................................................................2760.17101000
.TAGC-----T-CATTACTCTGTTAAGT..........................................................................................................................................................................................................................................21200.15303000
.........................................................................................................................................................TTAAACGTTGGGCCAAAGAA---T-TTGAT...............................................................................26200.15300030
....................................................................................................................................................CTTCATTAAACGTTGGGCCA..............................................................................................20200.10220000
.....................................................................................................................................................TTCATTAAACGTTGGGCCAAAGAA---T-TT..................................................................................27200.10220000
................................................................................................................................................................TTGGGCCAAAGAA---T-TTGATGA.............................................................................21200.10202000
............................................................TCAAAGACTTGGGCGTTATGTTTGACC...............................................................................................................................................................................27100.10100010
............................................................................................................................CAATAGAGCATGCAGCCTTCTTGGC.................................................................................................................25200.10200020
...........................................................................................................................................................AAACGTTGGGCCAAAGAA---T-TTGA................................................................................23200.10200020
..............................................................................................................................................TCTTGGCTTCATTAAACGTTGGGC................................................................................................24200.10200020
.....................................................................TGGGCGTTATGTTTGACCCAAAACT........................................................................................................................................................................25120.08101000
...................................................................CTTGGGCGTTATGTTTGACC...............................................................................................................................................................................20120.08100100
......................................................CATCGTTCAAAGACTTGGGCG...........................................................................................................................................................................................21130.08100010
........................................................................................................................TTGTCAATAGAGCATGCAGCC.........................................................................................................................21200.05101000
.TAGC-----T-CATTACTCTGTTAAGTCTGTTC....................................................................................................................................................................................................................................27200.05101000
..........................................................................................................................GTCAATAGAGCATGCAGCCTTCTTGG..................................................................................................................26200.05101000
..............................................................................................................................ATAGAGCATGCAGCCTTCTTGGCTTCAT............................................................................................................28200.05100010
.......................................................................................................................ATTGTCAATAGAGCATGCAGCCT........................................................................................................................23200.05101000
................................................................................................................................AGAGCATGCAGCCTTCTTGGC.................................................................................................................21200.05100001
...............................................TGTGTACCATCGTTCAAAGACT.................................................................................................................................................................................................22200.05100010
..........................................................................................................................................GCCTTCTTGGCTTCATTAAACGTTGGGCC...............................................................................................29200.05110000
...............TACTCTGTTAAGTCTGTTCTG..................................................................................................................................................................................................................................21200.05101000
........................................................................GCGTTATGTTTGACCCAAAAC.........................................................................................................................................................................21200.05101000
..............................................................................................................................................................CGTTGGGCCAAAGAA---T-TTGATGATCCC.........................................................................27200.05101000
....................................................ACCATCGTTCAAAGACTT................................................................................................................................................................................................18200.05110000
..........T-CATTACTCTGTTAAGTCTGT......................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................TGTCAATAGAGCATGCAGCCTTCTT....................................................................................................................25200.05101000
................................................................................................................................................TTGGCTTCATTAAACGTTGGGCCAAA............................................................................................26200.05101000
................................................................................................................................................TTGGCTTCATTAAACGTTGGG.................................................................................................21200.05101000
............................................................................................................................CAATAGAGCATGCAGCCTTCTTGGCT................................................................................................................26200.05100010
..........................................................................................................................................................TAAACGTTGGGCCAAAGAA---T-TTGATGA.............................................................................27200.05100001
...........................................................................................................................TCAATAGAGCATGCAGCCTTCTTGGC.................................................................................................................26200.05100010
droVir3
CTTGT-----C-AGTTATACAATCGACAATATCCCTTTGCA-----AAGTATACTAACAGTTAAGGATCTCGGCGTTATTTTTGATTCTAAACTATGTTTCAATCTTCACATAGATACCATTGTTAATGAGGCAAAAGGTGTACTTGGATTCATTAAGCGATTGTCTAAAGAG-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................TGTACTTGGATTCATTAAGCGAT....................................................................................................2366.0036001050200000010000000001052600001000408000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAGCGATT...................................................................................................2416.006000010100000110000000000000000000001001000000000000000000000000
...................................................................................................TCAATCTTCACATAGATACCATTGT..........................................................................................................................................25201.65330000000000000000000000000027000000000060000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAGCGATTA..................................................................................................2521.503002010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAGCGA.....................................................................................................2261.338003000000000010000000001001100000000001000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAGCGATTC..................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAGCGATTT..................................................................................................2521.002000000000000000000000000001000000000000000000000000000000001000
...................................................................................................TCAATCTTCACATAGATACCATTGTT.........................................................................................................................................26200.80160000000000000000000000000000000016000000000000000000000000000000
...................................................TACTAACAGTTAAGGATCTCG..............................................................................................................................................................................................2120.501000000000010000000000000000000000000000000000000000000000000000
.................................................TATACTAACAGTTAAGGATCTCGGCGT..........................................................................................................................................................................................2720.501000000000000000000000000000100000000000000000000000000000000000
......................................GCA-----AAGTATACTAACAGTTAAGGATC.................................................................................................................................................................................................2620.501000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAGCG......................................................................................................2160.503000000000001000000000000000000000000002000000000000000000000000
..................................................ATACTAACAGTTAAGGATCTCG..............................................................................................................................................................................................2220.501000000000000000000000001000000000000000000000000000000000000000
...................................................................................................TCAATCTTCACATAGATACCATTG...........................................................................................................................................24200.408008000000000000000000000000000000000000000000000000000000000000
...............................TCCCTTTGCA-----AAGTATACTAACA...........................................................................................................................................................................................................2330.331000000000000000000000000000000000001000000000000000000000000000
.................TACAATCGACAATATCCCTTTGCA-----AAGT....................................................................................................................................................................................................................2830.331000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................GTACTTGGATTCATTAAGCGA.....................................................................................................2160.332002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AAGGTGTACTTGGATTCATTAAG........................................................................................................2360.332000000000000000000000000000000000000000000000000000000000000002
.....................................................................................................................................AAAAGGTGTACTTGGATTCATTAAGC.......................................................................................................2660.171000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CTTGGATTCATTAAGCGAT....................................................................................................1960.171000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................TGTACTTGGATTCATTAAG........................................................................................................1960.171000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AGGTGTACTTGGATTCATTAAGC.......................................................................................................2360.171000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................GTACTTGGATTCATTAAGCGAT....................................................................................................2260.171001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTAATGAGGCAAAAGGTGTACTTGGAT................................................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
...................................................................................................TCAATCTTCACATAGATACCATTGTTAA.......................................................................................................................................28200.102000000000000000000000000000000000020000000000000000000000000000
...........................................................................................................CACATAGATACCATTGTTAATGAGG..................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................ATACCATTGTTAATGAGGCAAAAGG...........................................................................................................................25200.051000000000000000000000000000000010000000000000000000000000000000
....................................................................................................CAATCTTCACATAGATACCATTGTT.........................................................................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
............AGTTATACAATCGACAATATCCCT..................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
....T-----C-AGTTATACAATCGACAATATC.....................................................................................................................................................................................................................................23200.051000000000000000000000001000000000000000000000000000000000000000
...................................................................................................TCAATCTTCACATAGATACCATT............................................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................GATACCATTGTTAATGAGGCAA...............................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................TTGTTAATGAGGCAAAAGGTG.........................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
CTTGT-----C-AGTTATACAATCG.............................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AGGTGTACTTGGATTCATTA..........................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................CACATAGATACCATTGTTAATGAGGCAA...............................................................................................................................28200.051000000000000000000000000000000000000000000000000000000000010000
...............................................................................................TGTTTCAATCTTCACATAGATACCATTGT..........................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................TCAATCTTCACATAGATACCATTTC..........................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
....T-----C-AGTTATACAATCGACAATATCCCTT.................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................TCTTCACATAGATACCATTGTTAAT......................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................TTAATGAGGCAAAAGGTGTACTTGG..................................................................................................................25200.051000000001000000000000000000000000000000000000000000000000000000
droMoj3
ATTGT-----T-GATTATAAAATTAGCAATATTTCCTTACG-----ACGCATCTTTACAGTCAAAGATCTTGGTGTGTTCGTTGACTGTCAACTTAACTTTAATCTTCATATTTCTACCATCATTAATGAAGCCAAAAGTGTGCTTTGCTTTATTAAACGTTGGTT------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................TTAATCTTCATATTTCTACCATCATTA........................................................................................................................................27200.306600000
...........................AATATTTCCTTACG-----ACGCATC.................................................................................................................................................................................................................21200.051000010
.............................TATTTCCTTACG-----ACGCATCTTTA.............................................................................................................................................................................................................23200.051100000
.....................................TACG-----ACGCATCTTTACAGTCAAAGA...................................................................................................................................................................................................25200.051100000
droGri2
TT-GT-----T-AGTTACACGCTCGATGGGAGGCCACTTGA-----TAGACTGAATGATGTAAATTATTTAGGT-TTACTCTGGATCATCGGTTAAAATTTGATGGTCATATT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CAGGC-----T-TCGTACAATCTCTCTGGGATTGCCTTAGA-----AAAATTAGCTCAGGTTAATGATCTTGGTGTCCTCTTAGACATAAAACTTAAATTTTCCGACCATATTTCTTCAATGGTTAATAAGGCTAAAGGTGTTGTCGGTTTTATTAAAAGATGGGCTAAGGAA---TTTAACGGTGATGT-AGATAGCCAGCACTTACTAAGACGCT---------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................TCGGTTTTATTAAAAGATGGGCT...............................................................................................23200.153030000
........................................................................................................................TGGTTAATAAGGCTAAAGGTGTTGT.....................................................................................................................25200.153030000
.....................................................................................................................................................TTTATTAAAAGATGGGCTAAGGAA---TTG...................................................................................27140.142200000
.....................................................................................................................................................TTTATTAAAAGATGGGCTAAGGAA---TT....................................................................................26140.142020000
...................................................................................................................................................GTTTTATTAAAAGATGGGCTAAGGAA---TT....................................................................................28140.142020000
....................................................................................................................................................TTTTATTAAAAGATGGGCTAAGGAA---TT....................................................................................27140.142110000
............................................................................................................................TAATAAGGCTAAAGGTGTTGTCGG..................................................................................................................24200.102011000
...............................................................................................................TTTCTTCAATGGTTAATAAGGCTAA..............................................................................................................................25200.102020000
....................TCTCTCTGGGATTGCCTTAGA-----AA......................................................................................................................................................................................................................23200.102200000
....................................................................................................................TCAATGGTTAATAAGGCTAAAGGTGT........................................................................................................................26200.102002000
....................................................................................................................TCAATGGTTAATAAGGCTAAAGGT..........................................................................................................................24200.102020000
..........................................................................................................................................................TAAAAGATGGGCTAAGGAA---TTTAAC................................................................................25120.081001000
...................................................................................................................................................GTTTTATTAAAAGATGGGCTAAGGAA---......................................................................................26140.071100000
.....................................................................................................................................................TTTATTAAAAGATGGGCTAAGGAA---T.....................................................................................25140.071100000
.....................................................................................................................................................TTTATTAAAAGATGGGCTAAGG...........................................................................................22140.071001000
..................................................................................................................................................GGTTTTATTAAAAGATGGGCTAAG............................................................................................24140.071100000
.....................................................................................................................................................TTTATTAAAAGATGGGCTAAGGAA---......................................................................................24140.071010000
................................................................................................................................................TCGGTTTTATTAAAAGATGGGCTAAGG...........................................................................................27140.071100000
..............................................................AATGATCTTGGTGTCCTCTTAGACA...............................................................................................................................................................................25200.051010000
...............................................................................................................................TAAGGCTAAAGGTGTTGTCGGT.................................................................................................................22200.051010000
............................................................................................................ATATTTCTTCAATGGTTAATAAGGCTA...............................................................................................................................27200.051010000
...................................................................................GACATAAAACTTAAATTTTCCGACCATA.......................................................................................................................................................28200.051010000
.....................................................................................................................CAATGGTTAATAAGGCTAAAGGTGTT.......................................................................................................................26200.051100000
.............................................................................................................................AATAAGGCTAAAGGTGTTGTCGGT.................................................................................................................24200.051010000
..............................................................................................................................ATAAGGCTAAAGGTGTTGTCGGT.................................................................................................................23200.051010000
................................................................TGATCTTGGTGTCCTCTTAG..................................................................................................................................................................................20200.051010000
...............................................................................................................TTTCTTCAATGGTTAATAAGGCTAAAG............................................................................................................................27200.051010000
...............................................................................................................................TAAGGCTAAAGGTGTTGTCGG..................................................................................................................21200.051000010
................................................................................TTAGACATAAAACTTAAATTTTCCGAC...........................................................................................................................................................27200.051100000
CAGGC-----T-TCGTACAATCTCTC............................................................................................................................................................................................................................................20200.051010000
........................................................................................................................TGGTTAATAAGGCTAAAGGTGTTG......................................................................................................................24200.051000100
...........................................................................................................................................TGTTGTCGGTTTTATTAAAAGATGGGC................................................................................................27200.051010000
.............................................................................................................................................TTGTCGGTTTTATTAAAAGATGGGC................................................................................................25200.051001000
...................................................................................................................TTCAATGGTTAATAAGGCTAAAGG...........................................................................................................................24200.051001000
.AGGC-----T-TCGTACAATCTCTCTGGG........................................................................................................................................................................................................................................23200.051100000
......................................................CTCAGGTTAATGATCTTGGTGTCC........................................................................................................................................................................................24200.051010000
.................................................................................................................................AGGCTAAAGGTGTTGTCGGTT................................................................................................................21200.051010000
droBip1
CAGGC-----T-CTCTATACTCTTTACGGGATTGCCTTAGA-----AAAATTAGCTCAAGTTAATGATCTCGGCATCCTAATAGACTCGAATTTTAAATTTGCCGACCATATTTCCACAATGGTTAATAAGGCTTAAGGAGTCCTTGGTTTTATTAGAGGAATATAAACTAAT------AGAAGGAATAT------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTGC-----A-ACTTATATGCTAAATAATTGCGCTCTTGA-----AAGAATATCTCTTGTTGATGATTTAGGCGTTCGCTTAGACCCTAAACTTTCGTTCTCTGAAAATATTTCGTGCATGGTTCATAAAGCCAAAGGCATGCTCGGTTTTATTAAGAGGTGGTCGAAGGAA--GGAAGGAGGGGGCGT------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGGGG-----G-GCTTACACTTTAAGTGGGTGATCTTTGAATAGAACAGAATAACTCAGGTGGATGACCTTGGTGTTCTTCCGGACCCAAAATTAAAATTTTCTGTCCATATTTCGTCTATGGTGAATAAAGCCAGGAGTGTGCTTGGATTTATAAAAAAATAAATAACTAAA--AA-------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGCGT-----G-ACTTACACTCTAAGTGACTGCTCTTTAAA-----TAGAATTGCTTTTGTAAACGATCTTAGCGTCCTTTTTAACCCAAAACTGAAGTTTTCCGATTACGTTAAAGATA----CGATAAAGCTAGGGGTGTGGTTGGTCTTATTAAAAGGTGTGA-AGGGAA---T-----------TTGAGGTTGACTGGGTTATCAAGG--------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TACGC-----G-ACTTACACGTTAAGTGGCAGCTCTTTGGA-----TAGAATAACTCTTGTAAACGATCTTGGCGTTCTCTTGGACCCTAAACTAAAATTTTCTAATCACATTTCGTCCATGGTTAATAAAGCCAGAGGAGTGCTTGGATTTATTAAAAGGTGGTCAAAAAAA---T-------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TC--------A-ACTTATACTTTGAGCGGTTGTGTGTTAGA-----TAGAATAACGCATGCTGACGACCTTGGAGTCTATATGGATCCTAAACTTAAATTTTCTGATCACATTACTACCATGGTAAGTAAAGTCAGGGGCGTGCTTGCATATATCAAAAGGTGG--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTCACTATTCA-ACTTATACTTTGAGCGGTTGTGTGTTAGA-----TAGAATAACGCATGCTGACGACCTTGGAGTCTATATGGATGCCAAACTTAAATTTTCTGATCACATTACTACCATGGTAAATAAAGCCAGGGGCGTGCTTGCATTTATCAAAAGGTGG--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCTAC-----CCATTTACATCCTGCATGGTGTAGCTCTGGA-----AAGAATTAAGGCAGTCGAAGATCTTGGCATCTTACTCGATTCAAAAGTTAAATTTTCCGACCACATTTCCTATATGGTTAATAAAGCCAAAGGTGTGCTTGGTTTTACGTAGAGACGTACGCCAGAA--GACTG----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CGAAC-----G-ACTTACACTCTAAGTAAGTGCGCTTTGG------CAAAATAACACGGGTTGATGAACTTGGTGTTCTTCTGGAGCCTAAACTAAAATTTTCTGACCATATTTCGACTATTGTCAATAAGGCCAGGGGTGTGCTTGTTTATATAAAAAGGTAGTCAAAA--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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....................................................................................................................ACTATTGTCAATAAGGCCAGGGGA..........................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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.......................................................................................................................ATTGTCAATAAGGCCAGGGGTGTGCT.....................................................................................................................26200.2040000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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.............................................................................................................................AATAAGGCCAGGGGTGTGCT.....................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000
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...........................................................................................................................TCAATAAGGCCAGGGGTGTGCT.....................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................TAAGGCCAGGGGTGTGCT.....................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................ACTAAAATTTTCTGACCAT........................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGTT.........................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
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droSim2
CGCAC-----G-ACTTACACTCTAAGTGGGTGCCCTTTGGA-----CAGAATAACACGGGTTGATGATCTTGGGGTTCTTCTGGACCCTAAACTAAAATTTTCTGACCATATTTCGTCGATTGTCAATAAGGCCAGGGGTGTGCTTGTTTTTATAAAAAGGTGATCTACAAAA-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................GACCATATTTCGTCGATTGTCAAT......................................................................................................................................2419.00900000033210000000
...................................................................................................TTTCTGACCATATTTCGTCGATTGT..........................................................................................................................................2519.00900200010006000000
....................TCTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................26155.27790011005114723000000
....................................................................................................TTCTGACCATATTTCGTCGATTGT..........................................................................................................................................2415.00500000000302000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................24174.53770000005951111000000
.....................................TGGA-----CAGAATAACACGGGTTGATGATC.................................................................................................................................................................................................27194.268100000046101913011000
.........................................................................................AAACTAAAATTTTCTGACCATAT......................................................................................................................................................23204.1583000083000000000000
........................................................................................................GACCATATTTCGTCGATTGTCAATAAGGC.................................................................................................................................2914.00400000012010000000
........................................................................................................GACCATATTTCGTCGATTGTCAATAAGG..................................................................................................................................2814.00400000013000000000
........................................................................................................GACCATATTTCGTCGATTGTCAATA.....................................................................................................................................2514.00400000002020000000
.......................................GA-----CAGAATAACACGGGTTGATGATCT................................................................................................................................................................................................26183.44620000001403710082000
..............................................................GATGATCTTGGGGTTCTTCTGGACC...............................................................................................................................................................................2523.00600600000000000000
.........................................................GGGTTGATGATCTTGGGGTTCTTC.....................................................................................................................................................................................2433.00900010000008000000
.................................................................................................................TCGTCGATTGTCAATAAGGCCAGGGG...........................................................................................................................2612.00200000000200000000
........................................................................................................GACCATATTTCGTCGATTGTCAATAAG...................................................................................................................................2712.00200000002000000000
...................................................TAACACGGGTTGATGATCTTGGGG...........................................................................................................................................................................................2432.00600000010500000000
..............................TGCCCTTTGGA-----CAGAATAACACGGG..........................................................................................................................................................................................................25172.0034000101464521100000
CGCAC-----G-ACTTACACTCTAAGTGGG........................................................................................................................................................................................................................................24202.0040003000350020000000
....................................................................................................TTCTGACCATATTTCGTCGATTGTCA........................................................................................................................................2612.00200010000001000000
.....................................................................................................TCTGACCATATTTCGTCGATTGTCAA.......................................................................................................................................2612.00200000000200000000
................................................................................................................................AAGGCCAGGGGTGTGCT.....................................................................................................................17201.9038000000000038000000
.............................................................................................TAAAATTTTCTGACCATATTTCGTC................................................................................................................................................25201.803600760077008100000
.......................................GA-----CAGAATAACACGGGTTGATGA...................................................................................................................................................................................................23191.5830000000002320023000
....................................TTGGA-----CAGAATAACAC.............................................................................................................................................................................................................16201.4028000000260002000000
..............................................................................TTCTGGACCCTAAACTAAAATT..................................................................................................................................................................22161.3121000000831000000000
..............................TGCCCTTTGGA-----CAGAATAACACGGGT.........................................................................................................................................................................................................26171.292200020001419050000
...............TACACTCTAAGTGGGTGCCCTTTGGA-----CAGA....................................................................................................................................................................................................................30151.2018000000132300000000
...............TACACTCTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................31151.2018000000171000000000
.....................................................................................CCCTAAACTAAAATTTTCTGA............................................................................................................................................................21201.1523000023000000000000
.......................................GA-----CAGAATAACACGGGTTGATGAT..................................................................................................................................................................................................24191.1121000000402000123000
....................................TTGGA-----CAGAATAACACGGGTTGATGATC.................................................................................................................................................................................................28191.1121000000161201010000
...................................................................................................TTTCTGACCATATTTCGT.................................................................................................................................................18201.0521002000001018000000
...................................................TAACACGGGTTGATGATCTTGGG............................................................................................................................................................................................2331.00300000020100000000
...................................................................................................TTTCTGACCATATTTCGTCGATT............................................................................................................................................2311.00100000000001000000
....................................................................................................TTCTGACCATATTTCGTCGATTGTCAAT......................................................................................................................................2811.00100000010000000000
..............................................................GATGATCTTGGGGTTCTTCTGGACCC..............................................................................................................................................................................2621.00210000000001000000
.............................................................................................TAAAATTTTCTGACCATATTTCGTCGAT.............................................................................................................................................2811.00100000001000000000
..............................................................................................................ATTTCGTCGATTGTCAA.......................................................................................................................................1711.00100000000001000000
.............................................................................................................TATTTCGTCGATTGTCAATAAGGCCAGG.............................................................................................................................2811.00100000010000000000
.........................................................GGGTTGATGATCTTGGGGTTCTTCT....................................................................................................................................................................................2531.00300000000003000000
........................................................................................................GACCATATTTCGTCGATTGTCA........................................................................................................................................2211.00100000000100000000
...................................................................................................TTTCTGACCATATTTCGTCGATTGTCAA.......................................................................................................................................2811.00100000000001000000
..............................................................GATGATCTTGGGGTTCTTCTGGA.................................................................................................................................................................................2321.00200000000002000000
...................................................................................................TTTCTGACCATATTTCGTCGATTG...........................................................................................................................................2411.00100000000001000000
.....................................TGGA-----CAGAATAACACGGGTTGATGATCT................................................................................................................................................................................................28180.9417000000101600000000
.....................................TGGA-----CAGAATAACACGGGTTGATGAT..................................................................................................................................................................................................26190.891700000071602001000
...................................TTTGGA-----CAGAATAACAC.............................................................................................................................................................................................................17200.7515000000110004000000
...................................TTTGGA-----CAGAATAACACGGGTTGATGA...................................................................................................................................................................................................27180.721300100030900000000
.......................................GA-----CAGAATAACACGGGTTGATGATC.................................................................................................................................................................................................25190.6813000000000000112000
..............................................................GATGATCTTGGGGTTCTTC.....................................................................................................................................................................................1930.67200000000002000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAATA.................................................................................................................................................................................................................26150.53800000070001000000
...................CTCTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................27150.53800000062000000000
...................................................TAACACGGGTTGATGATCTTGG.............................................................................................................................................................................................22190.531000000020710000000
.............................................................TGATGATCTTGGGGTTCTTCTGGAC................................................................................................................................................................................2520.50100000000001000000
...................................................................................................................................GCCAGGGGTGTGCTTGTTT................................................................................................................1920.50100000000001000000
.................................................................................TGGACCCTAAACTAAAATTTTCT..............................................................................................................................................................23160.50800000014120000000
CGCAC-----G-ACTTACACTCTAAGTGG.........................................................................................................................................................................................................................................23200.501000000052300000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAAT..................................................................................................................................................................................................................25160.50800000042011000000
......................................................................................................................GATTGTCAATAAGGCCAGGGGTGTGA......................................................................................................................2620.50100000010000000000
..............................................................GATGATCTTGGGGTTCTTCTGGAC................................................................................................................................................................................2420.50100000000001000000
.......................................GA-----CAGAATAACACGGGTTGATGATCTT...............................................................................................................................................................................................27180.50900000010600020000
.....................................................................................................................................CAGGGGTGTGCTTGTTTTTATAAAAAGGT....................................................................................................2920.50100000010000000000
...............................................................................TCTGGACCCTAAACTAAAATT..................................................................................................................................................................21170.47800000040400000000
...........................................................................TTCTTCTGGACCCTAAACTAAAATT..................................................................................................................................................................25150.47700000000400021000
..............TTACACTCTAAGTGGGTGCCCTTTGGA-----CAGA....................................................................................................................................................................................................................31150.47700000060100000000
.............................................................................................TAAAATTTTCTGACCATATTTCGT.................................................................................................................................................24200.45900100010231001000
...............................................................................................................................TAAGGCCAGGGGTGTGCT.....................................................................................................................18200.45900000000009000000
...................................................................................................TTTCTGACCATATTTCGTC................................................................................................................................................19200.45900000000009000000
.....................................TGGA-----CAGAATAACACGGGTTGATGA...................................................................................................................................................................................................25190.42800000001401011000
...................................................TAACACGGGTTGATGATCTTG..............................................................................................................................................................................................21200.40800010000700000000
CGCAC-----G-ACTTACACTCTAAGTGGGTG......................................................................................................................................................................................................................................26200.40800000030410000000
...............TACACTCTAAGTGGGTGCCCTTTGGA-----........................................................................................................................................................................................................................26160.38600010022010000000
..............................................................................TTCTGGACCCTAAACTAAAATTT.................................................................................................................................................................23160.38600100020300000000
..............................................................................TTCTGGACCCTAAACTAAAAT...................................................................................................................................................................21160.38600000020220000000
....C-----G-ACTTACACTCTAAGTGGGT.......................................................................................................................................................................................................................................21200.35700000042100000000
................................................................................................AATTTTCTGACCATATTTCGT.................................................................................................................................................21200.35700000000016000000
.........................................................GGGTTGATGATCTTGGGG...........................................................................................................................................................................................1830.33100000001000000000
.........................................................GGGTTGATGATCTTGGG............................................................................................................................................................................................1730.33100000010000000000
...................................................TAACACGGGTTGATGATCTTGGGGT..........................................................................................................................................................................................2530.33100000010000000000
............................................................................TCTTCTGGACCCTAAACTAAAATTT.................................................................................................................................................................25150.33500000022100000000
.........................................................GGGTTGATGATCTTGGGGTTCT.......................................................................................................................................................................................2230.33100000000001000000
..............................................................GATGATCTTGGGGTT.........................................................................................................................................................................................1530.33100000000001000000
..............................................................GATGATCTTGGGGTTCTTCTGG..................................................................................................................................................................................2230.33100000000001000000
.........................................................GGGTTGATGATCTTGGGGTA.........................................................................................................................................................................................2030.33100000010000000000
...................................TTTGGA-----CAGAATAACACGGGTTGATGATC.................................................................................................................................................................................................29180.33600000040200000000
....................................................................................................TTCTGACCATATTTCGT.................................................................................................................................................17200.30600000000006000000
..............................TGCCCTTTGGA-----CAGAATAACA..............................................................................................................................................................................................................21200.30600000002004000000
..............................TGCCCTTTGGA-----CAGAATAACACGGGTT........................................................................................................................................................................................................27170.29500000000104000000
......................TAAGTGGGTGCCCTTTGGA-----CAGA....................................................................................................................................................................................................................23170.29500000020210000000
...................................TTTGGA-----CAGAATAACACGGGTTGAT.....................................................................................................................................................................................................25190.26500000010300010000
....................................TTGGA-----CAGAATAACACGGGTTGATGA...................................................................................................................................................................................................26190.26500000010310000000
..............................................CAGAATAACACGGGTTGATGATCTT...............................................................................................................................................................................................25190.26500000020003000000
.........................................................................................................................TGTCAATAAGGCCAGGGGTGTG.......................................................................................................................22200.25500000000003020000
.........................................................................................................................TGTCAATAAGGCCAGGGGTGTGCT.....................................................................................................................24200.25500000000004010000
........................................................................................................................TTGTCAATAAGGCCAGGGGTGTGCT.....................................................................................................................25200.25500000000220010000
..............................................................................TTCTGGACCCTAAACTAAAATTTT................................................................................................................................................................24160.25400000012100000000
......................TAAGTGGGTGCCCTTTGGA-----CAG.....................................................................................................................................................................................................................22170.24400000001201000000
...............................................................................TCTGGACCCTAAACTAAAAT...................................................................................................................................................................20170.24400000020200000000
...............................................................................TCTGGACCCTAAACTAAAATTT.................................................................................................................................................................22170.24400000001120000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAATAAC...............................................................................................................................................................................................................28130.23300010020000000000
....................TCTAAGTGGGTGCCCTTTGGA-----CAGAAT..................................................................................................................................................................................................................27140.21300000030000000000
...................................TTTGGA-----CAGAATAACACGGGTTGA......................................................................................................................................................................................................24190.21400100011100000000
...............................................................................TCTGGACCCTAAACTAAAA....................................................................................................................................................................19190.21400000020200000000
...............TACACTCTAAGTGGGTGCCCTTTGGA-----CAG.....................................................................................................................................................................................................................29150.20300000010200000000
............................................................................TCTTCTGGACCCTAAACTAAAATT..................................................................................................................................................................24150.20300000010110000000
...............................................................................................................................TAAGGCCAGGGGTGTG.......................................................................................................................16200.20400000000004000000
.............................................................................................................................AATAAGGCCAGGGGTGTGCT.....................................................................................................................20200.20400000000004000000
.............................................................................................................................AATAAGGCCAGGGGTGTGC......................................................................................................................19200.20400000000004000000
..........................................................................................AACTAAAATTTTCTGACCATA.......................................................................................................................................................21200.20400000031000000000
...............TACACTCTAAGTGGGTGCCCTTTGGA-----C.......................................................................................................................................................................................................................27150.20300000020100000000
...................................TTTGGA-----CAGAATAACACGGGT.........................................................................................................................................................................................................21200.20400200000101000000
...................................TTTGGA-----CAGAATAACA..............................................................................................................................................................................................................16200.20400000040000000000
...................................................................................................TTTCTGACCATATTTCG..................................................................................................................................................17200.20400000010102000000
................................................GAATAACACGGGTTGATGATCTT...............................................................................................................................................................................................23200.20400000000000031000
....................................................................................................................................................TTTTATAAAAAGGTGAA.................................................................................................1750.20100000000001000000
.................................................................................TGGACCCTAAACTAAAATT..................................................................................................................................................................19170.18300000010200000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAAA..................................................................................................................................................................................................................25180.17300000020100000000
.......................................GA-----CAGAATAACACGGGTTGATGATT.................................................................................................................................................................................................25200.15300000000000030000
.........................................................................................................................TGTCAATAAGGCCAGGGGTGT........................................................................................................................21200.15300000000003000000
...........................................................................................ACTAAAATTTTCTGACCATATT.....................................................................................................................................................22200.15300000012000000000
.........................................................................................................................TGTCAATAAGGCCAGGGGTGTGC......................................................................................................................23200.15300000000000030000
..........................................................................................................................GTCAATAAGGCCAGGGGTGT........................................................................................................................20200.15300000000003000000
........................................................................................................................TTGTCAATAAGGCCAGGGGTGTGC......................................................................................................................24200.15300000003000000000
...............................................................................................................................TAAGGCCAGGGGTGTGC......................................................................................................................17200.15300000000003000000
.....................................TGGA-----CAGAATAACACGGGTTGA......................................................................................................................................................................................................22200.15300000021000000000
..........................TGGGTGCCCTTTGGA-----CAGAATAACACGGG..........................................................................................................................................................................................................29150.13200000011000000000
................ACACTCTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................30150.13200000020000000000
....................TCTAAGTGGGTGCCCTTTGGA-----CAGAT...................................................................................................................................................................................................................26150.13200000011000000000
...........................GGGTGCCCTTTGGA-----CAGAATAACACGG...........................................................................................................................................................................................................27150.13200000000000020000
..................ACTCTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................28150.13200000001100000000
...............................................................................TCTGGACCCTAAACTAAAATTTTCTGA............................................................................................................................................................27160.13200000000200000000
..............................TGCCCTTTGGA-----CAGAATAACACGGGTTGA......................................................................................................................................................................................................29160.13200000020000000000
..............................................................................TTCTGGACCCTAAACTAAAATTTTC...............................................................................................................................................................25160.13200000000110000000
...............................................................................TCTGGACCCTAAACTAAAATTTTC...............................................................................................................................................................24170.12200000011000000000
..........................TGGGTGCCCTTTGGA-----CAGAATAACACG............................................................................................................................................................................................................27170.12200010000001000000
.................................................................................TGGACCCTAAACTAAAATTT.................................................................................................................................................................20170.12200000010100000000
...............................................................................TCTGGACCCTAAACTAAAATTTT................................................................................................................................................................23170.12200000001100000000
...............................GCCCTTTGGA-----CAGAATAACACGGGT.........................................................................................................................................................................................................25170.12200010000001000000
........................................................................................TAAACTAAAATTTTCTGACCATATT.....................................................................................................................................................25170.12200000002000000000
......................TAAGTGGGTGCCCTTTGGA-----C.......................................................................................................................................................................................................................20170.12200100010000000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAT...................................................................................................................................................................................................................24170.12200000010100000000
.....................................TGGA-----CAGAATAACACGGGTTGATGATCTT...............................................................................................................................................................................................29180.11200000011000000000
..............................TGCCCTTTGGA-----CAGAATAACACGGT..........................................................................................................................................................................................................25180.11200000010001000000
..............................................................................TTCTGGACCCTAAACTAAA.....................................................................................................................................................................19180.11200000010100000000
...................................TTTGGA-----CAGAATAACACGGGTTGATG....................................................................................................................................................................................................26180.11200000000110000000
..............................................................................TTCTGGACCCTAAACTAAAA....................................................................................................................................................................20180.11200000000200000000
....................................TTGGA-----CAGAATAACACGGGTTGATGATCT................................................................................................................................................................................................29180.11200000020000000000
..............................................................................TTCTGGACCCTAAACTAAAAA...................................................................................................................................................................21190.11200000010100000000
......................................GGA-----CAGAATAACACGGGTTGATGA...................................................................................................................................................................................................24190.11200000000200000000
......................................GGA-----CAGAATAACACGGGTTGATGAT..................................................................................................................................................................................................25190.11200000000000020000
.......................................GA-----CAGAATAACACGGGTTGATG....................................................................................................................................................................................................22190.11200000000100010000
...............................................................................................................................TAAGGCCAGGGGTGTGCTT....................................................................................................................19200.10200000000002000000
....................................TTGGA-----CAGAATAACACGGGTTGA......................................................................................................................................................................................................23200.10200000010100000000
.........................................................................................................................TGTCAATAAGGCCAGGGGTGTGCTT....................................................................................................................25200.10200000000002000000
........................................................................................................................TTGTCAATAAGGCCAGGGGT..........................................................................................................................20200.10200000000002000000
...............................GCCCTTTGGA-----CAGAAT..................................................................................................................................................................................................................16200.10200000000002000000
...................................TTTGGA-----CAGAATAACACGGGTT........................................................................................................................................................................................................22200.10200000000002000000
..............................................................................................................................ATAAGGCCAGGGGTGTGCTTG...................................................................................................................21200.10200000000002000000
..CAC-----G-ACTTACACTCTAAGTGGGTGCCC...................................................................................................................................................................................................................................27200.10200000020000000000
.......................................GA-----CAGAATAACACGGGTTGATGATA.................................................................................................................................................................................................25200.10200000000010010000
...............................................................................TCTGGACCCTAAACTAAAG....................................................................................................................................................................19200.10200000020000000000
CGCAC-----G-ACTTACACTCTAAGTGGGT.......................................................................................................................................................................................................................................25200.10200000010001000000
................................CCCTTTGGA-----CAGAATAACAC.............................................................................................................................................................................................................20200.10200000000002000000
........................................................................................................................TTGTCAATAAGGCCAGGGGTG.........................................................................................................................21200.10200000000002000000
...............................GCCCTTTGGA-----CAGAATAACA..............................................................................................................................................................................................................20200.10200000000002000000
.....................................TGGA-----CAGAATAACACGGGTTG.......................................................................................................................................................................................................21200.10200000001100000000
..............................TGCCCTTTGGA-----CAGAATAACACG............................................................................................................................................................................................................23200.10200000010001000000
....................................................................................................TTCTGACCATATTTCGTC................................................................................................................................................18200.10200000000002000000
...........................................................................................................................TCAATAAGGCCAGGGGTGTG.......................................................................................................................20200.10200000000001100000
...............................GCCCTTTGGA-----CAGAATAAC...............................................................................................................................................................................................................19200.10200000000002000000
............................................................................................CTAAAATTTTCTGACCATATT.....................................................................................................................................................21200.10200000011000000000
..CAC-----G-ACTTACACTCTAAGTGGGTGC.....................................................................................................................................................................................................................................25200.10200000010100000000
.............................................................................................................................AATAAGGCCAGGGGTGTG.......................................................................................................................18200.10200000000002000000
...AC-----G-ACTTACACTCTAAGTGGG........................................................................................................................................................................................................................................21200.10200000020000000000
...................CTCTAAGTGGGTGCCCTTTGGA-----CAGAATA.................................................................................................................................................................................................................29130.08100000000010000000
....................TCTAAGTGGGTGCCCTTTGGA-----CAGAATA.................................................................................................................................................................................................................28130.08100000001000000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAATAACA..............................................................................................................................................................................................................29130.08100000000100000000
.....................CTAAGTGGGTGCCCTTTGGA-----CAGAATA.................................................................................................................................................................................................................27130.08100010000000000000
...................CTCTAAGTGGGTGCCCTTTGGA-----CAGAAT..................................................................................................................................................................................................................28140.07100000010000000000
...........................................................................TTCTTCTGGACCCTAAACTAAAATTTT................................................................................................................................................................27150.07100000000100000000
.....................CTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................25150.07100000000100000000
..................ACTCTAAGTGGGTGCCCTTTGGA-----CAGA....................................................................................................................................................................................................................27150.07100000000100000000
..............TTACACTCTAAGTGGGTGCCCTTTGGA-----CA......................................................................................................................................................................................................................29150.07100000010000000000
....................TCTAAGTGGGTGCCCTTTGGA-----CAGA....................................................................................................................................................................................................................25150.07100000010000000000
.................................................................................TGGACCCTAAACTAAAATTTTCTGAC...........................................................................................................................................................26150.07100000000010000000
..............TTACACTCTAAGTGGGTGCCCTTTGGA-----C.......................................................................................................................................................................................................................28150.07100000000100000000
......................TAAGTGGGTGCCCTTTGGA-----CAGAATAA................................................................................................................................................................................................................27150.07100000010000000000
..................ACTCTAAGTGGGTGCCCTTTGGA-----CA......................................................................................................................................................................................................................25150.07100000000000001000
........................AGTGGGTGCCCTTTGGA-----CAGAATAA................................................................................................................................................................................................................25150.07100000000001000000
....................TCTAAGTGGGTGCCCTTTGGA-----CAG.....................................................................................................................................................................................................................24150.07100000010000000000
.................CACTCTAAGTGGGTGCCCTTTGGA-----CAGAA...................................................................................................................................................................................................................29150.07100000010000000000
...............TACACTCTAAGTGGGTGCCCTTTGGA-----CAGT....................................................................................................................................................................................................................30150.07100000010000000000
................................................................................CTGGACCCTAAACTAAAATTTTCTG.............................................................................................................................................................25160.06100000000100000000
droSec2
CGCAC-----G-ACTTACACTCTAAGTGGCTGCTCTCTGGA-----CAGAATAACACGAGTTGATGATCTTGGTGTTCTTCTGGACCCAAAACTAAAATTTTCTGACCATATTTCGTCTATTGTCAATAAGGCCAGGGGTGTGCTTGGTTTTATAAAAAGGTGGTCTAACGAA-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................GAGTTGATGATCTTGGTGTTCTTCT....................................................................................................................................................................................25201.703434000
.............................................................TGATGATCTTGGTGTTCTTCTG...................................................................................................................................................................................22200.601212000
.........................................................GAGTTGATGATCTTGGTGTTCT.......................................................................................................................................................................................22200.3066000
.........................................................GAGTTGATGATCTTGGTGTTCTTCTG...................................................................................................................................................................................26200.3066000
....................................................................................................................TCTATTGTCAATAAGGCCAGGGGT..........................................................................................................................24200.2040400
.........................................................GAGTTGATGATCTTGGTGTTC........................................................................................................................................................................................21200.1533000
.............................................................................................................................................TGCTTGGTTTTATAAAAAGGTGGTCT...............................................................................................26200.1533000
...........................................................................................................................................TGTGCTTGGTTTTATAAAAAGGTGGT.................................................................................................26200.1530030
..............................................................GATGATCTTGGTGTTCTTCTGGA.................................................................................................................................................................................23200.1533000
.........................................................GAGTTGATGATCTTGGTGTT.........................................................................................................................................................................................20200.1530030
...................................TCTGGA-----CAGAATAACACGAG..........................................................................................................................................................................................................20200.1533000
....................................................................................................................TCTATTGTCAATAAGGCCAGGGGTGTG.......................................................................................................................27200.1532010
..............................................................GATGATCTTGGTGTTCTTCTGGACCC..............................................................................................................................................................................26200.1022000
..............................TGCTCTCTGGA-----CAGAATAACACGAGT.........................................................................................................................................................................................................26200.1020020
.................................................................................TGGACCCAAAACTAAAATTTTCTGACCA.........................................................................................................................................................28200.1022000
...........................................................................................ACTAAAATTTTCTGACCATATTTCG..................................................................................................................................................25200.1022000
........................................A-----CAGAATAACACGAGTTGATG....................................................................................................................................................................................................21200.1020002
..........................................................AGTTGATGATCTTGGTGTTCTTCT....................................................................................................................................................................................24200.0511000
............................................................TTGATGATCTTGGTGTTCTTCTT...................................................................................................................................................................................23200.0511000
.............................................................................................................................................TGCTTGGTTTTATAAAAAGGTGGT.................................................................................................24200.0511000
.............................................................................................TAAAATTTTCTGACCATAT......................................................................................................................................................19200.0510010
..............................TGCTCTCTGGA-----CAGAATAACACGAG..........................................................................................................................................................................................................25200.0510001
.............................................................................................TAAAATTTTCTGACCATATTA....................................................................................................................................................21200.0511000
............................................................TTGATGATCTTGGTGTTCTTCTTT..................................................................................................................................................................................24200.0511000
......................................................................................................................TATTGTCAATAAGGCCAGGGGTG.........................................................................................................................23200.0511000
..............................................................................................AAAATTTTCTGACCATATTTC...................................................................................................................................................21200.0511000
...............................GCTCTCTGGA-----CAGAATAACACGAG..........................................................................................................................................................................................................24200.0511000
.............................................................TGATGATCTTGGTGTTCTTC.....................................................................................................................................................................................20200.0511000
....................................CTGGA-----CAGAATAACACGAG..........................................................................................................................................................................................................19200.0511000
.................................................................................................................TCGTCTATTGTCAATAAGGCCAGGG............................................................................................................................25200.0510010
.................................................................................................................................................TGGTTTTATAAAAAGGTGGTCTA..............................................................................................23200.0510010
...................................TCTGGA-----CAGAATAACACGAGA.........................................................................................................................................................................................................21200.0511000
............................................................TTGATGATCTTGGTGTTCTTC.....................................................................................................................................................................................21200.0510001
.................................................................GATCTTGGTGTTCTTCTGGACCC..............................................................................................................................................................................23200.0511000
......................................................................................................................TATTGTCAATAAGGCCAGGGGT..........................................................................................................................22200.0511000
.........................................................GAGTTGATGATCTTGGTGT..........................................................................................................................................................................................19200.0510010
..............................................................GATGATCTTGGTGTTCTTCTGGAC................................................................................................................................................................................24200.0510010
............................................................................................................................CAATAAGGCCAGGGGTGT........................................................................................................................18200.0510001
...................................................................................................................GTCTATTGTCAATAAGGCCAGGGG...........................................................................................................................24200.0511000
.....................................................................................................................CTATTGTCAATAAGGCCAGGGGTGTG.......................................................................................................................26200.0511000
...........................................................................................................................................TGTGCTTGGTTTTATAAAAAGGTGG..................................................................................................25200.0511000
..........................................................AGTTGATGATCTTGGTGTTC........................................................................................................................................................................................20200.0511000
....................................................................................................................TCTATTGTCAATAAGGCCAGGGGTA.........................................................................................................................25200.0510010
...........................................................................................ACTAAAATTTTCTGACCATATTTCGT.................................................................................................................................................26200.0511000
..........................................................AGTTGATGATCTTGGTGTTCTT......................................................................................................................................................................................22200.0510001
........................................................................................................................TTGTCAATAAGGCCAGGGGTGTGC......................................................................................................................24200.0510001
..............................................................................................................ATTTCGTCTATTGTCAATAAGGCC................................................................................................................................24200.0511000
...........................................................GTTGATGATCTTGGTGTTCTTCTGG..................................................................................................................................................................................25200.0511000
.....................................TGGA-----CAGAATAACACGAGTTGAT.....................................................................................................................................................................................................23200.0510010
....................................................................................................................TCTATTGTCAATAAGGCCT...............................................................................................................................19200.0511000
...........................................................................................................................................TGTGCTTGGTTTTATAAAAAGGTGGTCT...............................................................................................28200.0511000
...........................................................................................ACTAAAATTTTCTGACCATATTTCGTC................................................................................................................................................27200.0510001
droYak3
CACGC-----G-ACTTACACTTTAAGTGGGTGCTCTTTGGA-----CAGAATAAAACATGTTGATGATCTTGGTGTTTTTCTGGACCCTAAAATAAAATTTTCAGACCATATTTCGTCTATTGTCAATAAGGCCAGGGGTGTGCTTGGTTTTATATAACGGTGG--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................TCTTGGTGTTTTTCTGGACCCTAAAATA.......................................................................................................................................................................2811.00101000000000
......................................................................................................................TATTGTCAATAAGGCCAGGGGTG.........................................................................................................................23200.8016012210010000
......................................................................................................................TATTGTCAATAAGGCCAGGGGTGT........................................................................................................................24200.7515011040000000
......................................................................................................................TATTGTCAATAAGGCCAGGGGTGTG.......................................................................................................................25200.5010010000000000
......................................................................................................................TATTGTCAATAAGGCCAGGGGT..........................................................................................................................22200.45909000000000
......................................................................................................................TATTGTCAATAAGGCCAGGGGTGTGC......................................................................................................................26200.30606000000000
.....................................................................................................................CTATTGTCAATAAGGCCAGGGGTG.........................................................................................................................24200.25505000000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGTG.........................................................................................................................22200.20404000000000
......................................................................................................................TATTGTCAATAAGGCCAGGGG...........................................................................................................................21200.15303000000000
......................................................................................................................TATTGTCAATAAGGCCAGGG............................................................................................................................20200.15303000000000
....................................................................................................................TCTATTGTCAATAAGGCCAGGGGTG.........................................................................................................................25200.15303000000000
...............TACACTTTAAGTGGGTGCTCTTTGGA-----CA......................................................................................................................................................................................................................28200.10200200000000
.....................................................................................................................CTATTGTCAATAAGGCCAGGG............................................................................................................................21200.10202000000000
...............TACACTTTAAGTGGGTGCTCTTTGGA-----C.......................................................................................................................................................................................................................27200.10202000000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGTGT........................................................................................................................23200.10202000000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGT..........................................................................................................................21200.10202000000000
....................................................................................................................TCTATTGTCAATAAGGCCAGG.............................................................................................................................21200.10201100000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGTGTGCT.....................................................................................................................26200.05100000010000
.................CACTTTAAGTGGGTGCTCTTTGGA-----C.......................................................................................................................................................................................................................25200.05101000000000
......................TAAGTGGGTGCTCTTTGGA-----........................................................................................................................................................................................................................19200.05100000010000
......................................................................................................................TATTGTCAATAAGGCCAGGGGC..........................................................................................................................22200.05101000000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGTGTGC......................................................................................................................25200.05101000000000
......................................................................................................................TATTGTCAATAAGGCCAGGGT...........................................................................................................................21200.05100000010000
..............TTACACTTTAAGTGGGTGCTCTTTGG..............................................................................................................................................................................................................................26200.05101000000000
.......................................................................................................................ATTGTCAATAAGGCCAGGGGTGTGCTT....................................................................................................................27200.05101000000000
droEre2
TCAAC-----C-CAAAACGCTCTAAGTGGGTGCTCTTTGAA-----CAGAATAACACGTGTTAATGATCTTGGTGTTCTTCTAGACCCTAAACTAAAAATTTCAGACCATATTTCGTCTATTGTCAATAAGGCCAGGGGTGTGCTTGGTTTTATAAAAAGGTGG--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................TCTATTGTCAATAAGGCCAGGGGT..........................................................................................................................2457.803900000039
.................................................................................................................TCGTCTATTGTCAATAAGGCCAGGGGT..........................................................................................................................2742.501000000010
...................................................................................................................GTCTATTGTCAATAAGGCCAGGGG...........................................................................................................................2452.201100000011
...............................................................................................................TTTCGTCTATTGTCAATAAGGCCAGGGG...........................................................................................................................2841.2550000005
.................................................................................................................TCGTCTATTGTCAATAAGGCCAGGGG...........................................................................................................................2641.0040000004
...................................................................................................................GTCTATTGTCAATAAGGCCAGGGGT..........................................................................................................................2550.6030000003
................................................................................................................TTCGTCTATTGTCAATAAGGCCAGGGGT..........................................................................................................................2840.5020000002
....................................................................................................................TCTATTGTCAATAAGGCCAGGGG...........................................................................................................................2350.2010000001
....................................................................................................................TCTATTGTCAATAAGGCC................................................................................................................................1880.1310000001
................................................................TGATCTTGGTGTTCTTCTG...................................................................................................................................................................................19160.0610000001

Generated: 05/18/2015 at 02:13 AM