ID:

dps_193

 Coordinate:

Unknown_group_57:36506-36565 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

Antisense to intron [Dpse\GA28171-in]

Repeatable elements

NameClassFamilyStrand
Gypsy6-I_Dmoj-intLTRGypsy+
mature
  1. Unknown_group_339:4696-4719 -
  2. dps_193  Unknown_group_57:36508-36531 -
star
  1. Unknown_group_132:5202-5220 +
  2. Unknown_group_132:9724-9742 +
  3. Unknown_group_36:18419-18437 +
  4. Unknown_group_123:377-395 -
  5. Unknown_group_374:9322-9340 +
  6. Unknown_group_339:4731-4749 -
  7. Unknown_group_606:6701-6719 -
  8. dps_193  Unknown_group_57:36543-36561 -
  9. Unknown_singleton_3725:647-665 +
  10. Unknown_group_818:524-542 +
  11. Unknown_singleton_523:239-257 +
  12. Unknown_singleton_669:723-741 -
  13. Unknown_group_615:257-275 +
  14. Unknown_singleton_452:1469-1487 +
  15. Unknown_singleton_670:142-160 +
  16. Unknown_singleton_3482:739-757 +
  17. Unknown_singleton_3723:208-226 -
  18. Unknown_singleton_88:561-579 +

Sense Strand Reads

GCGGCACGGGGTCGATGGTTCTGCGTCGTCCCGATGCTGCGAAGTGCTTCTCGGTCCCGCGCGGTTTCGTAGGCGGAGACGAGCTGGGTCAATTCTGTGAGGGATCGGAAATCCTGTCTGCGCGTGTACATTTGATACTCCGGGCGGAGATTTTAGATCC
***************************************....(((((((.(((((((.(((((.......(((........))).........))))).)))))))))).........))))************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 GSM444067
head
....................................................................................TGGGTCAATTCTGTGAGGGATCGG.................................................... 24 0 2 14.50 29 27 2 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATCGGA................................................... 25 0 2 14.50 29 19 5 5 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATCG..................................................... 23 0 3 6.67 20 16 2 2 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATC...................................................... 22 0 3 3.33 10 8 1 0 0 0 0 1
....................................................................................TGGGTCAATTCTGTGAGGGA........................................................ 20 0 3 2.67 8 4 1 0 1 2 0 0
....................................................................................TGGGTCAATTCTGTGAGGGAT....................................................... 21 0 3 2.33 7 3 0 0 3 0 1 0
...........TCGATGGTTCTGCGTCGTCCCGATG............................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATTTGA......................... 24 0 10 1.40 14 11 0 3 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGG.......................................................... 18 0 3 1.00 3 3 0 0 0 0 0 0
...........TCGATGGTTCTGCGTCGTCCCGATGC........................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........TCGACGGTTCTGCGTCGTCCCGA.............................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................GGGTCAATTCTGTGAGGGA........................................................ 19 0 3 1.00 3 3 0 0 0 0 0 0
.....................................................................................GGGTCAATTCTGTGAGGGATCGG.................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATCGGAAAA................................................ 28 1 2 1.00 2 2 0 0 0 0 0 0
..............................................................................................................ATCCTGTCTGCGCGTGTACATTTGA......................... 25 0 10 0.70 7 2 0 4 0 1 0 0
..................................................................................................................TGTCTGCGCGTGTACATTTGATAC...................... 24 0 18 0.67 12 11 0 0 1 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGG......................................................... 19 0 3 0.67 2 2 0 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGATACTCCGGGC............... 27 0 3 0.67 2 2 0 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGATACTCCGGG................ 26 0 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................GGGTCAATTCTGTGAGGGATCG..................................................... 22 0 3 0.67 2 2 0 0 0 0 0 0
..................................................................................................................TGTCTGCGCGTGTACATTTGATACTCC................... 27 0 16 0.63 10 9 0 1 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATTTG.......................... 23 0 10 0.60 6 6 0 0 0 0 0 0
.....................................................................................GGGTCAATTCTGTGAGGGATCGGA................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATCGGAA.................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................CGAGCTGGGTCAATTCTGTGAGG.......................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATCGGAAA................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................TGGTCAATTCTGTGAGGGATCGGA................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................TGGGCCAATTCTGTGAGGGATCGG.................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGATACTCCGG................. 25 0 15 0.47 7 4 0 1 0 2 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATCGGA................................................... 25 1 17 0.41 7 3 0 2 0 2 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATTTGATAC...................... 27 0 10 0.40 4 4 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATCGG.................................................... 24 1 17 0.35 6 2 0 3 0 1 0 0
.......................................................................................................................GCGCGTGTACATTTGATACTCCGGG................ 25 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGGGAGGGAT....................................................... 21 1 3 0.33 1 0 0 0 0 0 1 0
.................................................................................AGCTGGGTCAATTCTGTGAGGGATC...................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................TTCTGTGAGGGATCGGAAATCCTG............................................ 24 0 3 0.33 1 0 1 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGGGT........................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................TCTGCGCGTGTACATTTGATACTCCGGG................ 28 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................AATTCTGTGAGGGATCGGAAATCCTGTC.......................................... 28 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................TGTCTGCGCGTGTACATTTGATA....................... 23 0 18 0.33 6 3 2 0 0 1 0 0
....................................................................................TGGGTCAATTCTGTGAGGGATT...................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................CTGTGAGGGATCGGAAATCCTGTAAA........................................ 26 3 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................TGTGAGGGATCGGAAATCCTGTCTGC....................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................TGTCTGCGCGTGTACATTTGATACTC.................... 26 0 16 0.31 5 4 1 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATTTGAT........................ 25 0 10 0.30 3 2 0 0 0 0 1 0
....................................................................................TGGGTCAATTCTGTAAGGGA........................................................ 20 1 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................AATTCTGTGAGGGATCGGAAATC............................................... 23 0 4 0.25 1 1 0 0 0 0 0 0
.............................................................................................................................GTACATTTGATACTCCGGGCGT............. 22 1 4 0.25 1 1 0 0 0 0 0 0
............................................TGCTTCTCGGTCCCGCGCGG................................................................................................ 20 0 4 0.25 1 1 0 0 0 0 0 0
............................................TGCTTCTCGGTCCCGCGCGGTT.............................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0
............................................................................................................................TGTACATTTGATACTCCGGGCGG............. 23 0 4 0.25 1 1 0 0 0 0 0 0
......................................................TCCCGCGCGGTTTCGTAGG....................................................................................... 19 0 18 0.22 4 4 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGAGTGTACATTTG.......................... 23 1 10 0.20 2 2 0 0 0 0 0 0
..............................................................................................................................TACATTTGATACTCCGGGC............... 19 0 5 0.20 1 1 0 0 0 0 0 0
...............................................................................................................................ACATTTGATACTCCGGGCGGAGATT........ 25 0 5 0.20 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATC...................................................... 22 1 18 0.17 3 0 0 0 0 3 0 0
..................................................................................................................TGTCTGCGCGTGTACATTTGATACT..................... 25 0 18 0.17 3 2 1 0 0 0 0 0
......................................................TCCCGCGCGGTTTCGTAGGC...................................................................................... 20 0 18 0.17 3 2 0 1 0 0 0 0
................................................................................................................CCTGTCTGCGCGTGTACATTTGATACTCC................... 29 0 8 0.13 1 1 0 0 0 0 0 0
..............................................................................................CTGTGAGCGATCGGAAATCCTGTCTG........................................ 26 1 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................TGTGAGCGATCGGAAATCCTGTC.......................................... 23 1 8 0.13 1 1 0 0 0 0 0 0
..................................................TCGGTCCCGCGCGGTTTCGTAGGC...................................................................................... 24 0 17 0.12 2 1 1 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGATACTCC................... 23 0 17 0.12 2 1 0 0 0 0 1 0
......................................................................................................................TGCGCGTGTACATTTGATACTC.................... 22 0 17 0.12 2 2 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAG........................................................... 17 0 18 0.11 2 0 0 2 0 0 0 0
........................................................................................................TCGGAAATCCTGTCTGCGCGTGTACATT............................ 28 0 9 0.11 1 1 0 0 0 0 0 0
........................................................................................................TCGGAAATCCTGTCTGCGCGTGTA................................ 24 0 9 0.11 1 1 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATCTGATAC...................... 27 1 10 0.10 1 1 0 0 0 0 0 0
...............................................................................................................TCCTGCCTGCGCGTGTACATTTGATAC...................... 27 1 10 0.10 1 1 0 0 0 0 0 0
............................................................................................................AAATCCTGTCTGCGCGTGTAC............................... 21 0 10 0.10 1 1 0 0 0 0 0 0
..............................................................................................................ATCCTGTCTGCGCGTGTACATTTG.......................... 24 0 10 0.10 1 1 0 0 0 0 0 0
..............................................................................................................ATCCTGTCTGCGCGTGTATATTTGATA....................... 27 1 10 0.10 1 1 0 0 0 0 0 0
..............................................................................................................ATCCTGTCTGCGCGTGTACATTTGAT........................ 26 0 10 0.10 1 1 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGAGTGTACATTTGATAC...................... 27 1 10 0.10 1 0 0 0 0 0 0 1
...............................................................................................................TCCTGTCTGCGAGTGTACATTTGA......................... 24 1 10 0.10 1 1 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATTCGATAC...................... 27 1 10 0.10 1 1 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATT............................ 21 0 10 0.10 1 1 0 0 0 0 0 0
.............................................................................................................AATCCTGTCTGCGCGTGTACATTTGAA........................ 27 1 10 0.10 1 1 0 0 0 0 0 0
..............................................................................................................ATCCTGTCTGCGCGTGTACATTTGATAC...................... 28 0 10 0.10 1 1 0 0 0 0 0 0
..............................................................................................................ATCCTGTCTGCGCGTGTACAT............................. 21 0 10 0.10 1 0 1 0 0 0 0 0
................................................................................................................CCTGTCTGCGCGTGTACATTTGATAC...................... 26 0 10 0.10 1 1 0 0 0 0 0 0
...............................................................................................................TCCTGTCTGCGCGTGTACATTTGATACT..................... 28 0 10 0.10 1 1 0 0 0 0 0 0
....................................................................................................................TCTGCGCGTGTACATTTGATACTCCGG................. 27 0 15 0.07 1 1 0 0 0 0 0 0
.......................................................................................................................GCGCGTGTACATTTGATACTCCGG................. 24 0 15 0.07 1 1 0 0 0 0 0 0
...................................................................................................................GTCTGCGCGTGTACATTTGATACTCC................... 26 0 16 0.06 1 1 0 0 0 0 0 0
..................................................................................................................TGTCTGCGCGTGTATATTTGATACTCC................... 27 1 16 0.06 1 1 0 0 0 0 0 0
...................................................................................................................GTCTGCGCGTGTACATTTGATACTC.................... 25 0 16 0.06 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATCGGAAA................................................. 27 1 17 0.06 1 1 0 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGATACTCCT.................. 24 1 17 0.06 1 1 0 0 0 0 0 0
................................................TCTCGGTCCCGCGCGGTTTCGTAGG....................................................................................... 25 0 17 0.06 1 1 0 0 0 0 0 0
..................................................TCGGTCCCGCGCGGTTTCGTAGG....................................................................................... 23 0 17 0.06 1 1 0 0 0 0 0 0
.....................................................................................GGGTCAATTCTGTGAGCGATCGG.................................................... 23 1 17 0.06 1 1 0 0 0 0 0 0
.................................................CTCGGTCCCGCGCGGTTTCGTAGG....................................................................................... 24 0 17 0.06 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATCGGAA.................................................. 26 1 17 0.06 1 1 0 0 0 0 0 0
................................................TCTCGGTCCCGCGCGGTTTCGTA......................................................................................... 23 0 18 0.06 1 1 0 0 0 0 0 0
................................................TCTCGGTCCCGCGCGGTTG............................................................................................. 19 1 18 0.06 1 1 0 0 0 0 0 0
..................................................TCGGTCCCGCGCGGTTTT............................................................................................ 18 1 18 0.06 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATCG..................................................... 23 1 18 0.06 1 1 0 0 0 0 0 0
.................................................................................AGCTGGGTCAATTCTGTGAGC.......................................................... 21 1 18 0.06 1 0 0 1 0 0 0 0
................................................TCTCGGTCCCGAGCGGTTTCGTAG........................................................................................ 24 1 18 0.06 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGC.......................................................... 18 1 18 0.06 1 1 0 0 0 0 0 0
................................................TCTCGGTCCCGCGCGGTTTT............................................................................................ 20 1 18 0.06 1 1 0 0 0 0 0 0
......................................................TCCCGAGCGGTTTCGTAGG....................................................................................... 19 1 19 0.05 1 1 0 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGATACTG.................... 22 1 19 0.05 1 1 0 0 0 0 0 0
....................................................................................TGGGTCAATTCTGTGAGCGATCA..................................................... 23 2 19 0.05 1 0 0 0 0 1 0 0
......................................................TCCCGCGCGGTTTCGTATGC...................................................................................... 20 1 19 0.05 1 1 0 0 0 0 0 0
.............................................................................GACGAGCTGGGTCAATTCTGTGA............................................................ 23 0 19 0.05 1 1 0 0 0 0 0 0
................................................................................GAGCTGGGTCAATTCTGTGA............................................................ 20 0 19 0.05 1 1 0 0 0 0 0 0
......................................................................................................................TGCGCGTGTACATTTGAT........................ 18 0 19 0.05 1 1 0 0 0 0 0 0
......................................................................................................................TGCGAGTGCACATTTGAT........................ 18 2 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

CGCCGTGCCCCAGCTACCAAGACGCAGCAGGGCTACGACGCTTCACGAAGAGCCAGGGCGCGCCAAAGCATCCGCCTCTGCTCGACCCAGTTAAGACACTCCCTAGCCTTTAGGACAGACGCGCACATGTAAACTATGAGGCCCGCCTCTAAAATCTAGG
*************************************....(((((((.(((((((.(((((.......(((........))).........))))).)))))))))).........))))*************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M059
embryo
..........................................................................CCTCTGCTCGACCCAGTTAA.................................................................. 20 0 1 1.00 1 1 0 0 0 0
.......................................................................CCGCCTCTGCTCGACCCAGTTAA.................................................................. 23 0 1 1.00 1 1 0 0 0 0
.........................................................................GCCTCTGCTCGACCCAGTTAA.................................................................. 21 0 1 1.00 1 1 0 0 0 0
........................................................................CGCCTCTGCTCGACCCAGTTAA.................................................................. 22 0 1 1.00 1 1 0 0 0 0
........................................................................................................AGCCTTTAGGACAGACGCGCACATGT.............................. 26 0 9 0.67 6 6 0 0 0 0
...............................................................................................................AGGACAGACGCGCACATGTAAACTAT....................... 26 0 10 0.60 6 4 2 0 0 0
................................................AGAGCCAGGGCGCGCCAAAGCAT......................................................................................... 23 0 18 0.50 9 9 0 0 0 0
....................................AACGCTTCACGAAGAGCCAGGGCGCGC................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
..............................................GAAGAGCCAGGGCGCGCCAAAGCAT......................................................................................... 25 0 4 0.50 2 2 0 0 0 0
................................................................................................................GGACAGACGCGCACATGTAAACTAT....................... 25 0 10 0.50 5 5 0 0 0 0
.............................................................................CTGCTCGACCCAGTTAAGACACTCCCT........................................................ 27 0 2 0.50 1 1 0 0 0 0
.....................................................................................................CCTAGCCTTTAGGACAGACGCGCAC.................................. 25 0 4 0.50 2 2 0 0 0 0
....................................................................................................CCCTAGCCTTTAGGACAGACGCGC.................................... 24 0 3 0.33 1 1 0 0 0 0
.......................................................................................................TAGCCTTTAGGACAGACGCGCACAT................................ 25 0 9 0.33 3 3 0 0 0 0
..................................................................................................CTCCCTAGCCTTTAGGACAGACG....................................... 23 0 3 0.33 1 1 0 0 0 0
....................................................................................................CCCTAGCCTTTAGGACAGACG....................................... 21 0 4 0.25 1 1 0 0 0 0
...............................................AAGAGCCAGGGCGCGCCAAAGCAT......................................................................................... 24 0 4 0.25 1 1 0 0 0 0
..............................................AAAGAGCCAGGGCGCGCCAAAGCAT......................................................................................... 25 1 4 0.25 1 1 0 0 0 0
......................................................................................................CTAGCCTTTAGGACAGACGCGCACATGT.............................. 28 0 9 0.22 2 2 0 0 0 0
............................................................................TCTGCTCGACCCAGTTAAGACACT............................................................ 24 0 19 0.21 4 3 0 0 0 1
.............................................................................................................TTAGGACAGACGCGCACATGTAAACT......................... 26 0 10 0.20 2 2 0 0 0 0
.............................................................................................................TTAGGACAGACGCGCACATGTAAAC.......................... 25 0 10 0.20 2 2 0 0 0 0
.............................................................................................................TTAGGACAGACGCGCACATGTAAA........................... 24 0 10 0.20 2 2 0 0 0 0
.............................................................................................................TTAGGACAGACGCGCACATGTAAACTAT....................... 28 0 10 0.20 2 2 0 0 0 0
..............................................................................................................TAGGACAGACGCGCACATGTAAACTAT....................... 27 0 10 0.20 2 2 0 0 0 0
.........................................................................................................GCCTTTAGGACAGACGCGCACATGTA............................. 26 0 10 0.20 2 2 0 0 0 0
...............................................AAGAGCCAGGTCGCGCCAAAGCAT......................................................................................... 24 1 5 0.20 1 1 0 0 0 0
...........................................................................CTCTGCTCGACCCAGTTAA.................................................................. 19 0 18 0.17 3 3 0 0 0 0
.............................................................................CTGCTCGACCCAGTTAAGACACT............................................................ 23 0 19 0.16 3 3 0 0 0 0
....................................................................................................CGCTAGCCTTTAGGACAGACGCGCACAT................................ 28 1 7 0.14 1 1 0 0 0 0
CGCCGTGCCCCAGCTACCAAG........................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
......................................................................................................ATAGCCTTTAGGACAGACGCGCACAT................................ 26 1 9 0.11 1 1 0 0 0 0
.....................................................................................................TCTAGCCTTTAGGACAGACGCGCACAT................................ 27 1 9 0.11 1 1 0 0 0 0
..................................................................................................................ACAGACGCGCACATGTAAACTAT....................... 23 0 18 0.11 2 2 0 0 0 0
........................................................................................................AGCCTTTAGGACAGATGCGCACATGT.............................. 26 1 9 0.11 1 0 0 1 0 0
.................................................GAGCCAGGGCGCGCCAAAGCAT......................................................................................... 22 0 18 0.11 2 2 0 0 0 0
......................................................................................................CTAGCCTTTAGGACAGACGCGCAC.................................. 24 0 9 0.11 1 1 0 0 0 0
.......................................................................................................AAGCCTTTAGGACAGACGCGCACATGT.............................. 27 1 9 0.11 1 1 0 0 0 0
...................................................GCCAGGGCGCGCCAAAGCAT......................................................................................... 20 0 18 0.11 2 2 0 0 0 0
.............................................AGAAGAGCGAGGGCTCGCCA............................................................................................... 20 3 9 0.11 1 1 0 0 0 0
......................................................................................................CTAGCCTTTAGGACAGACGCGCACAT................................ 26 0 9 0.11 1 1 0 0 0 0
..............................................................................TGCTCGACCCAGTTAAGACACT............................................................ 22 0 19 0.11 2 1 0 0 0 1
.............................................................................................................TTAGGACAGACGCGCACATGT.............................. 21 0 10 0.10 1 1 0 0 0 0
................................................................................................................GGACAGACGCGCACATGTAAACT......................... 23 0 10 0.10 1 1 0 0 0 0
..............................................................................................................TAGGACAGACGCGCACATGTAAACTATA...................... 28 1 10 0.10 1 0 0 1 0 0
..........................................................................................................CCTTTAGGACAGACGCGCACATGT.............................. 24 0 10 0.10 1 1 0 0 0 0
..............................................................................................................TAGGACAGACGCGCACATGTAAA........................... 23 0 10 0.10 1 1 0 0 0 0
..............................................................................................................TAGGACAGACGCGCACATGT.............................. 20 0 10 0.10 1 0 1 0 0 0
............................................................................................................TTTAGGACAGACGCGCACATGT.............................. 22 0 10 0.10 1 1 0 0 0 0
..............................................................................................................TAGGACAGACGCGCACATGTAAACT......................... 25 0 10 0.10 1 1 0 0 0 0
................................................................................................................GGACAGACGCGCACATGTAAA........................... 21 0 10 0.10 1 1 0 0 0 0
...........................................................................................................CTTTGGGACAGACGCGCACATGT.............................. 23 1 10 0.10 1 1 0 0 0 0
......................................................................................................CTAGCCTTTAGGACAGACGCGCA................................... 23 0 10 0.10 1 1 0 0 0 0
.........................................................................................................GCCTTTAGGACAGACGCGCACAT................................ 23 0 10 0.10 1 1 0 0 0 0
.................................................................................................................GACAGACGCGCACATGTAAACTAT....................... 24 0 10 0.10 1 1 0 0 0 0
...............................................................................................................AGGACAGACGCGCACATGTAAAC.......................... 23 0 10 0.10 1 1 0 0 0 0
.............................................................................................................TTAGGACAGACGCGCACATATAAAC.......................... 25 1 10 0.10 1 1 0 0 0 0
.............................................................................................................TTAGGACAGACGCGCACATG............................... 20 0 10 0.10 1 1 0 0 0 0
.............................................................................................................TTAGGACAGACGCGCACATATAAACTAT....................... 28 1 10 0.10 1 1 0 0 0 0
......................................................................................................CTAGCCTTTAGGACAGACG....................................... 19 0 11 0.09 1 1 0 0 0 0
......................................................................................................CTAGCCTTTAGGACAGAC........................................ 18 0 11 0.09 1 1 0 0 0 0
......................................................................................................ATAGCCTTTAGGACAGACG....................................... 19 1 11 0.09 1 1 0 0 0 0
.........................................................................................................................CGCACATGTAAACTATGAGGC.................. 21 0 16 0.06 1 1 0 0 0 0
...........................................................................CTCTGCTCGACCCAGTTAAGACA.............................................................. 23 0 17 0.06 1 1 0 0 0 0
....................................................CCAGGGCGCGCCAAAGCATCCG...................................................................................... 22 0 17 0.06 1 1 0 0 0 0
...................................................GCCAGGGCGCGCCAAAACAT......................................................................................... 20 1 18 0.06 1 1 0 0 0 0
........................................................GTCGGGCCAAAGCAGCCGC..................................................................................... 19 3 18 0.06 1 1 0 0 0 0
................................................AGAGCCAGGGCGCGCCAAAACAT......................................................................................... 23 1 18 0.06 1 1 0 0 0 0
.................................................................................TCGACCCAGTTAAGACACTC........................................................... 20 0 18 0.06 1 0 0 0 1 0
.................................................GAGCCAGGGCGCGCCAAAGCA.......................................................................................... 21 0 18 0.06 1 1 0 0 0 0
..................................................AGCCAGGGCGCGCCAAAGCAT......................................................................................... 21 0 18 0.06 1 1 0 0 0 0
...................................................GCCAGGGCGCGCCAACGCAT......................................................................................... 20 1 18 0.06 1 1 0 0 0 0
...............................................TTGAGCCAGGGCGCGCCAAAGCAT......................................................................................... 24 2 18 0.06 1 1 0 0 0 0
...................................................................................................................CAGACGCGCACATGTAAACTAT....................... 22 0 18 0.06 1 1 0 0 0 0
..................................................AGCCAGGGCGCGCCGAAGCAT......................................................................................... 21 1 18 0.06 1 0 0 0 1 0
..............................................TTAGAGCCAGGGCGCGCCAAAGCAT......................................................................................... 25 2 19 0.05 1 1 0 0 0 0
...............................................................................GCTCGACCCAGTTAAGACACT............................................................ 21 0 19 0.05 1 1 0 0 0 0
............................................................................TCTGCTCGACCCAGTTAA.................................................................. 18 0 20 0.05 1 1 0 0 0 0
...........................................................................ATCTGCTCGACCCAGTTAA.................................................................. 19 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_57:36456-36615 - dps_193 GCGGCA-CGGGGTC--------------GATG-------GTTCT---GCGTC-G----TCCCGATGCTG---------CGAAGTGCTTC-T------------C--------GGTCCCGCGCGGTTTCGTAGGCGGAGACGAGCTGGGTCAATTCTGTGAGGGATCGGAAATCCTGTCTGCGCGTGTACATTTGATACTCCGGGCGGAGATTT---TAGATCC
droPer2 scaffold_74:103986-104148 - GCGGCA-CGGGGTC--------------GATG-------GTTCT---GCGTC-G----TCCCGATGCTG---------CGAAGTGCTTC-T------------C--------GGTCCCGCGCGGTTTCATAGGCGGAGACGAGCTGGGTCAATTCTGTAAGGGATCGGAAATCCTGTCTGCGCGTGTACATTTGATACTCCGGGCGGAGATTTTCGTAGATCC
droWil2 scf2_1100000004929:20442-20541 + GT---------------------------------------------------------------------------------------------------------------------------CTCATAATTTAGCACCACCTTGGTTAAGCCGGGTAACGTTTGGAAATCATTTCGTCGGGTAAACAGATTGTAGTCTGGTAATAGATTTTCGTAGATCC
droVir3 scaffold_12728:603271-603313 + C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGCGGCGTTTTCGTAGATCC
droMoj3 scaffold_6385:58770-58932 - GGCTT---GGGCCT--------------GACG-------G-TCT---CCACC-G----TTGTCGTCCTCTCTAGTTCTCTT------CG-C------------T--------GATTCCACACGTTTTCGAACTTTGCAGCCATCTGTGTCAGCTGTGTAAGGGATGGGAAATCGTGCCTCCGTACGTATAGCCTATATTCCGGGGATGCGTTCTCGTAGGCCC
droAna3 scaffold_13099:3053320-3053459 + GCGGCA-CGAGGAG--------------GA----------------------------------TGTGC---------CGTGTTGGGCC-T------------T--------GATCTAGTGCATTTTCGTAGGCGGTGGCCAGCTGCATTAGTATTGCCAC----AAGAACTAGTGTCGGCCAATGAAAAGTTGGTACTCCAATAGTAAGATCTCGTAGATCC
droKik1 scf7180000302801:4525-4684 + GCGGCC-TGGCGTT--------------GA----------G---TCGGGATC-C----GGTTCTCGAGC---------GTTCTTCCGCC-T------------C--------GGCTGCGTGTCTCCTCGTAGTTGGTCACGAGATGCGTTAGCTCGGTCAGCGTACGGAAATCCTGCCTCCGGGTGTAGAGTTGATACTCCGGCAGCATATTTTCATAGATCC
droFic1 scf7180000452737:171-336 + GTTGTT-CTT---A--------------A--AGTCCTCGATG--CTGTCATC-A----TTTGCGTATAG---------CGGCGTTGGTC-C------------C--------GGTCACGGGTAAATTCGAAGTCCGTCACCAGCTGGGTTAATTTCGCCAGCGATTCAAACTCGTGCCGTCGCGTGAAGAGTTGGTACTCTGGTAGGAGGTTTTCATAAATCC
droEle1 scf7180000491267:92952-93105 - TCGGCAGTGGGGCC--------------GATG-------TTGCT---AAACCTTTGGTACCCGATGC----------------AAAGGGTCCGGATTGCTTCCA--------GTTTCCA---------------------CGGCTGCGTCAACTCGGTGAGCCTCTCAAAATCATTCCTCCGGGTGAATAGCTGGTATTCTGGCAGCATGTTTTCATAAACTC
droRho1 scf7180000774137:175-337 + GTGGGA-CGGGCTC----------------------TCGATG--TCGTCATC-A----GCTGGGCATAT---------CTGTGTTGACC-C------------C--------GATCCCGGGTAACTTCGAAGTTCGTCACCAGCTGGGTCAATTGCGTCAGCGTCTCAAATTCATGTCGTCTCGTGAAAAGTTGGTACTCTGGGCGGAGATTTTCGTAGATCC
droBia1 scf7180000301486:674-834 + CGGC-GCTGGCTGT------------------------GGTT--CTGTCAAC-A----TTCTGGCACGG---------CATCCTGTGGT-T------------C--------GATCGCGGGTGATCTCGTAGTTTACCTGTAATGTGGTAAGTTTCTCCAAAGTAGTGAAGTCGTGCCTCCTGGCGTACATCTGATACTCCGGTCGGAGATTTTCATAGATAC
droTak1 scf7180000414918:8854-9012 + GCGAA---------------------------GTCCTCGATG--TCGACATT-A----GCTGGGCGTAC---------CTGCGTTGGTT-T------------C--------GGTCCCGGGTTACCTCGAAGTTTGTCACTAGCTGGGTCAACTTTGTCAGAGTGTCAAACTCGTGCCGTCGCGTGAAAAGTTGATATTCTGGGAGGAGGTTTTCGTATATCC
droEug1 scf7180000409847:38644-38795 + GCGGCT-GGT---G--------------GATG-------CGCCT---GTGCG-G----TGGTTTC--------------------------------------GGACTCCGCGGCTGCGGGCAACTTCGAAGTTGACCACCAAGTGTGTGAGTTCAGTCAGCGTTTTGAAACCTTGGCGTCGGGTGAACATCTGGTATTCAGGCAGCATGTTCTCATAGACCC
droSim2 node_13580:2707-2766 + TCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACTCGTGTCTCCTGGTGAAAAGCTGGTAATCCGACTGGAGCTTCTCATAAATCC
droYak3 v2_chrUn_120:111914-112084 + GCGTCA-GGACTCCGCTGTGGAGGACTAA--AACCCTCG-CG--C-------------TCCTG--ACGA---------CTGGATTGGTT-C-----------CGGTCTCCTCGGCTCCTAATTGTCTCAAAATCTACTACTAGCTAAGTCAGTTCAGCCAGTGCTCGAAAATCCTGACGCCGAGTGTACAGTTGGTACTCTGGCAACATATTT----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCGGCA-CGGGGTC--------------GATG-------GTTCT---GCGTC-G----TCCCGATGCTG---------CGAAGTGCTTC-T------------C--------GGTCCCGCGCGGTTTCGTAGGCGGAGACGAGCTGGGTCAATTCTGTGAGGGATCGGAAATCCTGTCTGCGCGTGTACATTTGATACTCCGGGCGGAGATTT---TAGATCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................TGGGTCAATTCTGTGAGGGATCGG.......................................................24214.502902700002000
................................................................................................................................................TGGGTCAATTCTGTGAGGGATCGGA......................................................25214.502901900005500
................................................................................................................................................TGGGTCAATTCTGTGAGGGATCG........................................................2336.672001600002200
................................................................................................................................................TGGGTCAATTCTGTGAGGGATC.........................................................2233.33100800011000
................................................................................................................................................TGGGTCAATTCTGTGAGGGA...........................................................2032.6780410001020
................................................................................................................................................TGGGTCAATTCTGTGAGGGAT..........................................................2132.3370330100000
............TC--------------GATG-------GTTCT---GCGTC-G----TCCCGATG.............................................................................................................................................................2512.0020200000000
...........................................................................................................................................................................TCCTGTCTGCGCGTGTACATTTGA............................24101.401401100000300
................................................................................................................................................TGGGTCAATTCTGTGAGG.............................................................1831.0030300000000
............TC--------------GATG-------GTTCT---GCGTC-G----TCCCGATGC............................................................................................................................................................2611.0010100000000
.................................................................................................................................................GGGTCAATTCTGTGAGGGA...........................................................1931.0030300000000
.................................................................................................................................................GGGTCAATTCTGTGAGGGATCGG.......................................................2321.0020200000000
................................................................................................................................................TGGGTCAATTCTGTGAGGGATCGGAAAA...................................................2821.0020200000000
..........................................................................................................................................................................ATCCTGTCTGCGCGTGTACATTTGA............................25100.7070200000410
..............................................................................................................................................................................TGTCTGCGCGTGTACATTTGATAC.........................24180.671201110000000
................................................................................................................................................TGGGTCAATTCTGTGAGGG............................................................1930.6720200000000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTCCGGGC..................2730.6720200000000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTCCGGG...................2630.6720200000000
.................................................................................................................................................GGGTCAATTCTGTGAGGGATCG........................................................2230.6720200000000
..............................................................................................................................................................................TGTCTGCGCGTGTACATTTGATACTCC......................27160.63100900000100
...........................................................................................................................................................................TCCTGTCTGCGCGTGTACATTTG.............................23100.6060600000000
.................................................................................................................................................GGGTCAATTCTGTGAGGGATCGGA......................................................2420.5010100000000
................................................................................................................................................TGGGTCAATTCTGTGAGGGATCGGAA.....................................................2620.5010100000000
...........................................................................................................................................CGAGCTGGGTCAATTCTGTGAGG.............................................................2320.5010100000000
................................................................................................................................................TGGGTCAATTCTGTGAGGGATCGGAAA....................................................2720.5010100000000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTCCGG....................25150.4770400000120
...........................................................................................................................................................................TCCTGTCTGCGCGTGTACATTTGATAC.........................27100.4040400000000
...................................................................................................................................................................................GCGCGTGTACATTTGATACTCCGGG...................2530.3310100000000
.............................................................................................................................................AGCTGGGTCAATTCTGTGAGGGATC.........................................................2530.3310100000000
........................................................................................................................................................TTCTGTGAGGGATCGGAAATCCTG...............................................2430.3310000001000
................................................................................................................................................TGGGTCAATTCTGTGAGGGT...........................................................2030.3310100000000
................................................................................................................................................................................TCTGCGCGTGTACATTTGATACTCCGGG...................2830.3310100000000
......................................................................................................................................................AATTCTGTGAGGGATCGGAAATCCTGTC.............................................2830.3310100000000
..............................................................................................................................................................................TGTCTGCGCGTGTACATTTGATA..........................23180.3360300002010
................................................................................................................................................TGGGTCAATTCTGTGAGGGATT.........................................................2230.3310100000000
..........................................................................................................................................................CTGTGAGGGATCGGAAATCCTGTAAA...........................................2630.3310100000000
...........................................................................................................................................................TGTGAGGGATCGGAAATCCTGTCTGC..........................................2630.3310100000000
..............................................................................................................................................................................TGTCTGCGCGTGTACATTTGATACTC.......................26160.3150400001000
...........................................................................................................................................................................TCCTGTCTGCGCGTGTACATTTGAT...........................25100.3030200100000
......................................................................................................................................................AATTCTGTGAGGGATCGGAAATC..................................................2340.2510100000000
.........................................................................................................................................................................................GTACATTTGATACTCCGGGCGT................2240.2510100000000
...................................................................................TGCTTC-T------------C--------GGTCCCGCGCGG...................................................................................................2040.2510100000000
...................................................................................TGCTTC-T------------C--------GGTCCCGCGCGGTT.................................................................................................2240.2510100000000
........................................................................................................................................................................................TGTACATTTGATACTCCGGGCGG................2340.2510100000000
..................................................................................................................TCCCGCGCGGTTTCGTAGG..........................................................................................19180.2240400000000
..........................................................................................................................................................................................TACATTTGATACTCCGGGC..................1950.2010100000000
...........................................................................................................................................................................................ACATTTGATACTCCGGGCGGAGATT...........2550.2010100000000
..............................................................................................................................................................................TGTCTGCGCGTGTACATTTGATACT........................25180.1730200001000
..................................................................................................................TCCCGCGCGGTTTCGTAGGC.........................................................................................20180.1730200000100
............................................................................................................................................................................CCTGTCTGCGCGTGTACATTTGATACTCC......................2980.1310100000000
..........................................................................................T------------C--------GGTCCCGCGCGGTTTCGTAGGC.........................................................................................24170.1220100001000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTCC......................23170.1220100100000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTC.......................22170.1220200000000
................................................................................................................................................TGGGTCAATTCTGTGAG..............................................................17180.1120000000200
....................................................................................................................................................................TCGGAAATCCTGTCTGCGCGTGTACATT...............................2890.1110100000000
....................................................................................................................................................................TCGGAAATCCTGTCTGCGCGTGTA...................................2490.1110100000000
........................................................................................................................................................................AAATCCTGTCTGCGCGTGTAC..................................21100.1010100000000
..........................................................................................................................................................................ATCCTGTCTGCGCGTGTACATTTG.............................24100.1010100000000
..........................................................................................................................................................................ATCCTGTCTGCGCGTGTACATTTGAT...........................26100.1010100000000
...........................................................................................................................................................................TCCTGTCTGCGCGTGTACATT...............................21100.1010100000000
.........................................................................................................................................................................AATCCTGTCTGCGCGTGTACATTTGAA...........................27100.1010100000000
..........................................................................................................................................................................ATCCTGTCTGCGCGTGTACATTTGATAC.........................28100.1010100000000
..........................................................................................................................................................................ATCCTGTCTGCGCGTGTACAT................................21100.1010000001000
............................................................................................................................................................................CCTGTCTGCGCGTGTACATTTGATAC.........................26100.1010100000000
...........................................................................................................................................................................TCCTGTCTGCGCGTGTACATTTGATACT........................28100.1010100000000
................................................................................................................................................................................TCTGCGCGTGTACATTTGATACTCCGG....................27150.0710100000000
...................................................................................................................................................................................GCGCGTGTACATTTGATACTCCGG....................24150.0710100000000
...............................................................................................................................................................................GTCTGCGCGTGTACATTTGATACTCC......................26160.0610100000000
...............................................................................................................................................................................GTCTGCGCGTGTACATTTGATACTC.......................25160.0610100000000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTCCT.....................24170.0610100000000
.......................................................................................TC-T------------C--------GGTCCCGCGCGGTTTCGTAGG..........................................................................................25170.0610100000000
..........................................................................................T------------C--------GGTCCCGCGCGGTTTCGTAGG..........................................................................................23170.0610100000000
........................................................................................C-T------------C--------GGTCCCGCGCGGTTTCGTAGG..........................................................................................24170.0610100000000
.......................................................................................TC-T------------C--------GGTCCCGCGCGGTTTCGTA............................................................................................23180.0610100000000
.......................................................................................TC-T------------C--------GGTCCCGCGCGGTTG................................................................................................19180.0610100000000
..........................................................................................T------------C--------GGTCCCGCGCGGTTTT...............................................................................................18180.0610100000000
.............................................................................................................................................AGCTGGGTCAATTCTGTGAGC.............................................................21180.0610000000100
................................................................................................................................................TGGGTCAATTCTGTGAGC.............................................................18180.0610100000000
.......................................................................................TC-T------------C--------GGTCCCGCGCGGTTTT...............................................................................................20180.0610100000000
..................................................................................................................................................................................TGCGCGTGTACATTTGATACTG.......................22190.0510100000000
.........................................................................................................................................GACGAGCTGGGTCAATTCTGTGA...............................................................23190.0510100000000
............................................................................................................................................GAGCTGGGTCAATTCTGTGA...............................................................20190.0510100000000
..................................................................................................................................................................................TGCGCGTGTACATTTGAT...........................18190.0510100000000
droPer2
GCGGCA-CGGGGTC--------------GATG-------GTTCT---GCGTC-G----TCCCGATGCTG---------CGAAGTGCTTC-T------------C--------GGTCCCGCGCGGTTTCATAGGCGGAGACGAGCTGGGTCAATTCTGTAAGGGATCGGAAATCCTGTCTGCGCGTGTACATTTGATACTCCGGGCGGAGATTTTCGTAGATCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GT---------------------------------------------------------------------------------------------------------------------------CTCATAATTTAGCACCACCTTGGTTAAGCCGGGTAACGTTTGGAAATCATTTCGTCGGGTAAACAGATTGTAGTCTGGTAATAGATTTTCGTAGATCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................TAACGTTTGGAAATCATTTCGTCGGG.......................................26202.00400100300
.....................................................................................................................................................TAAGCCGGGTAACGTTTGGAAATCATT...............................................27201.9539070320
.................................................................................................................................................TGGTTAAGCCGGGTAACGTTTGGAAA....................................................26200.9018020160
...................................................................................................................................................................................................TAGTCTGGTAATAGATTTTCGTAGATCC28200.45909000
.................................................................................................................................................................................................TGTAGTCTGGTAATAGATTTTCGTAGA...27200.35703040
...............................................................................................................................................................AACGTTTGGAAATCATTTCGTCGGG.......................................25200.35703040
.................................................................................................................................................TGGTTAAGCCGGGTAACGTTTGGA......................................................24200.30603030
...................................................................................................................................................................................................TAGTCTGGTAATAGATTTTCGTAGA...25200.25501040
..............................................................................................................................................................TAACGTTTGGAAATCATTTCGTCGGGTA.....................................28200.25505000
.....................................................................................................................................................TAAGCCGGGTAACGTTTGGAAATCAT................................................26200.20402020
.................................................................................................................................................TGGTTAAGCCGGGTAACGTTTGGAA.....................................................25200.20402020
.....................................................................................................................................................TAAGCCGGGTAACGTTTGGAAATCATTT..............................................28200.20403010
.................................................................................................................................................TGGTTAAGCCGGGTAACGTTTGG.......................................................23200.15301020
..............................................................................................................................................................TAACGTTTGGAAATCATTTCGTCGGGT......................................27200.15301020
....................................................................................................................................................TTAAGCCGGGTAACGTTTGGAAATCATT...............................................28200.10202000
.................................................................................................................................................TGGTTAAGCCGGGTAACGT...........................................................19200.10202000
................................................................................................................................................TTGGTTAAGCCGGGTAACGTTTGG.......................................................24200.10200020
....................................................................................................................................................TTAAGCCGGGTAACGTTTGGAAATCAT................................................27200.10201010
.................................................................................................................................................TGGTTAAGCCGGGTAACGTT..........................................................20200.10201010
.....................................................................................................................................................TAAGCCGGGTAACGTTTGGAAATC..................................................24200.10200020
...................................................................................................................................................................................................TAGTCTGGTAATAGATTTTCGTAGATC.27200.10201010
.................................................................................................................................................TGGTTAAGCCGGGTAACGTTTGGAAAA...................................................27200.10200020
....................................................................................................................................................................TTGGAAATCATTTCGTCGGG.......................................20200.05100010
................................................................................................................................................................................................TTGTAGTCTGGTAATAGATTTTCG.......24200.05101000
................................................................................................................................................................................................TTGTAGTCTGGTAATAGATA...........20200.05100010
................................................................................................................................................TTGGTTAAGCCGGGTAACGTTTGGAA.....................................................26200.05100010
....................................................................................................................................................................................................AGTCTGGTAATAGATTTTCGTAGAT..25200.05101000
................................................................................................................................................TTGGTTAAGCCGGGTAACGTTTGGA......................................................25200.05100010
..................................................................................................................................................GGTTAAGCCGGGTAACGTTTGG.......................................................22200.05101000
.....................................................................................................................................................TAAGCCGGGTAACGTTTGGAAATCATC...............................................27200.05101000
................................................................................................................................................................................................TTGTAGTCTGGTAATAGATTTTCGT......25200.05100010
........................................................................................................................................................................................................TGGTAATAGATTTTCGTAGATC.22200.05100010
...............................................................................................................................................................AACGTTTGGAAATCATTTCGTCGGGTA.....................................27200.05100010
................................................................................................................................................................ACGTTTGGAAATCATTTCGTCGGG.......................................24200.05101000
.................................................................................................................................................................................................TGTAGTCTGGTAATAGATTTTCGTAGAT..28200.05101000
......................................................................................................................................................................................................TCTGGTAATAGATTTTCGTAGATCC25200.05100010
droVir3
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGCGGCGTTTTCGTAGATCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGC.................26428.2511320181081400010010000000003265721066922434300000000000000000003000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGG.....................221719.94339304104218080100200000000011538107225022422033021300000000000000000102000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGT.................24416.5066000000000000400000003003505150101400150100000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGC.................24415.75630001023000000000000030026060200204006071000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGG....................23514.00700012160100030100000010004124511041630412400010000000000000000010
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAG..................23413.00520010010000000000000040053040140009007040000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGT.................26412.7551000040000000200000002001117801047004050100000000000000000000003
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGTT................25412.5050000000300000700000001006107020008019050000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCG......................211710.531790010127070101001000000000352484211031017110010400000000000000000000010
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAG..................25410.2541208010000000000000001001121351040103312100000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGCGG...............2639.0027000000000000200000000000308020003005040000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGA...................2448.7535006020001000000000000001032812101012110100000000000100000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGCGGC..............2737.0021000000000000000000000000309030003002010000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGCG................2736.0018013020000000000000000000002400000000213000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGA...................2246.0024000000100000000000001003103071001003030000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGG....................2163.3320000000000000000000000004105030100002040000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGTT................2742.7511000010000000100000000000003200020000020000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGCG................2532.337000000000000000000000000102010100001010000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATT........................19192.21420040110001000000000000006022300000140006100010000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGTTT...............2662.0012000000000000300000000000103000001002020000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGAGC.................2541.757002000000000000000000000002200000000001000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTC.......................20171.6528001090001000010000000001062300000020001100000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGG.....................20191.4728000020300000100000000006701000003004010000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCG......................19190.8917000000000000000000000003201030102003020000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGCGG...............2830.672001010000000000000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCA......................21170.6511000040000000000000000000020500000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGT.....................22170.539001000100000000000010001020300000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAA..................2540.502000010000010000000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGA.................2640.502000000000000000000000000001100000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAAA.................2640.502000000000000000000000000010100000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGTTT...............2840.502000010000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGAGT.................2540.502000000000000100000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGG....................2260.503001100000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGAG..................2440.502000000000000000000000000000010000100000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGA...................2340.502000000000000000000000000000010010000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAAT.................2640.502000000000000000000000000000100000000100000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTAT.........................18190.479000020100000000000000000210100000101000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGG.....................21190.377004000000000000000000001000000000000110000000000000000000000000
.......................................................................................................................................................................................ACGTAGAGTTTGTATTCGGGAGCGGCG.............2730.331000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGCGGT..............2730.331000000000000000000000000000000000000010000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGCGA...............2830.331000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGAGCGG...............2730.331000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGCGGCG.............2830.331000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CGTAGAGTTTGTATTCGGGAGCGGC..............2530.331000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGC...................2260.332000000000000000000000001000010000000000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCG......................20190.265000030000000000000000000000000000000101000000000000000000000000
.......................................................................................................................................................................................ACGTAGAGTTTGTATTCGGGAGC.................2340.251000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGAGCC................2640.251001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACGTAGAGTTTGTATTCGGGAGT.................2340.251000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGTTA...............2640.251000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CGTAGAGTTTGTATTCGGGAGTT................2340.251000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTCGGGAGTT................2640.251000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAAT.................2440.251000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAGGT................2540.251000000000000000000000000000000000000010000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAT..................2540.251000010000000000000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGAT................2740.251000000000000000000000000000000000000010000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGAGCT................2740.251000000000000000000000000000000001000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGGATT.................2640.251000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGAT..................2350.201000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGGATT.................2450.201000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................TTCGGGAGCGGCGTTTTCGTAGATCC26160.193001000000000000000000000000000001001000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCC......................21170.183001010000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................CGTAGAGTTTGTATTCGGG....................1960.171000010000000000000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTAA.........................18190.163000000000000000000000000001000000000100000001000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATT........................18200.153000020000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................TTGTATTCGGGAGCGGCGTTTTCGTCC....27150.132000000000000000000000000000000000000000000000000000000000000002
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAGCGGCG.............24150.132001000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTCGGGAGCGGCGTTTTCGTAG....22160.132000000000000000000000000100010000000000000000000000000000000000
.....................................................................................................................................................................................................TTCGGGAGCGGCGTTTTCGTAGATC.25160.132000000000000000000000000000010000001000000000000000000000000000
..............................................................................................................................................................................................GTTTGTATTCGGGAGCGGCGTTTC.........24170.122000000000000000000000000000000000000000000000000000000000000002
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCAA.....................22170.122000000000000000000000000000000001010000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGT....................23170.122000000000000000000000000000200000000000000000000000000000000000
.......................................................................................................................................................................................................CGGGAGCGGCGTTTTCGTAGATC.23190.112000000000000000000000000000100000001000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTC.......................18190.112000000000000000000000000001000001000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCA......................19190.112000000000000000000000001001000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGA.....................20190.112000000000000000000000000101000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTAA......................21200.102000000000000000000000000000200000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATAAA......................21200.102000010000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAGCGGCGT............25150.071000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................TTGTATTCGGGAGCGGCGTTTTCGT......25150.071000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAGCGG...............22150.071000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAGCGGC..............23150.071000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................GAGTTTGTATTCGGGAGCGGC..............21150.071001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AGAGTTTGTATTCGGGAGCGG...............21150.071000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................TTGTATTCGGGAGCGGCG.............18160.061001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCGGGAGCGGCGTTTTCGTAGATC.24160.061000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................TTTGTATTCGGGAGCGGC..............18160.061000000010000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTTGTATTCGGGAGCGGCGTTTTCG.......25160.061000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TTGTATTCGGGAGCGGCGTTTTA........23160.061001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TATTCGGGAGCGGCGTTTTCGTAGA...25160.061000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................TCGGGAGCGGCGTTTTCGTAGATCC25160.061000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................TTCGGGAGCGGCGTTTTCGTAGAT..24160.061000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TTGTATTCGGGAGCGGCGTTTTCG.......24160.061000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................ATTCGGGAGCGGCGTTTTCGTAGATC.26160.061000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................ATTCGGGAGCGGCGTTTTCGTAG....23160.061000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................ATTCGGGAGCGGCGTTTTCGTAGA...24160.061000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................TCGGGAGCGGCGTTTTCGTAGA...22160.061000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................ATTCGGGAGCGGCGTTTTCGT......21170.061000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................ATTCGGGAGCGGCGTTTTCGTA.....22170.061000000000000000000000000000000010000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCCC.....................22170.061000000000000000000000000000100000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCT......................21170.061000000000000010000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGA.....................22170.061000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................AGAGTTTGTATTCGGGAGA.................19180.061000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................TATTCGGGAGCGGCGTTTTCG.......21180.061000000000000000000000000000000001000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGTG...................24180.061000000001000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AGAGTTTGTATTCGGGAGC.................19180.061000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAGC.................20180.061000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................AGAGTTTGTATTCGGGAA..................18180.061000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAG..................19180.061000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................AGAGTTTGTATTCGGGAGCC................20180.061000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................CGTAGAGTTTGTATTCGG.....................18190.051000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................AGAGTTTGTATTCGGGAGCGT...............21190.051001000000000000000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCCTC....................23190.051000000000000000000000000000000000000000100000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGCCC..................25190.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................ACGTAGAGTTTGTATTCGG.....................19190.051000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................CGGGAGCGGCGTTTTCGTAG....20190.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................GCACGTAGAGTTTGTATTC.......................19190.051000010000000000000000000000000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATA........................19190.051000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGT.....................20190.051000000000000000000000000001000000000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTCGGC....................23190.051000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................CGGGAGCGGCGTTTTCGTAGA...21190.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................GGAGCGGCGTTTTCGTAGATC.21200.051000000000000000000000000000000000001000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTAAT.....................22200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................CACGTAGAGTTTGTATTCGGC....................21200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................TAGAGTTTGTATTCGGGAGTTT...............22200.051000000000000000000000000000000001000000000000000000000000000000
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGTAGAGTTTGTATTAT......................21200.051000000000000000000000000000100000000000000000000000000000000000
droMoj3
GGCTT---GGGCCT--------------GACG-------G-TCT---CCACC-G----TTGTCGTCCTCTCTAGTTCTCTT------CG-C------------T--------GATTCCACACGTTTTCGAACTTTGCAGCCATCTGTGTCAGCTGTGTAAGGGATGGGAAATCGTGCCTCCGTACGTATAGCCTATATTCCGGGGATGCGTTCTCGTAGGCCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................TAGCCTATATTCCGGGGATGCGTTC..........2515.005310010
...................................................................................................................................................................................................TATTCCGGGGATGCGTTCTCGTAGGCCC28202.15430300400
...................................................................................................................................................................................................TATTCCGGGGATGCGTTCTCGTAGGCC.27201.40280000280
..............................................................................................................................................TCTGTGTCAGCTGTGTAAGGGATGGG.......................................................2611.001000001
..............................................................................................................................................................................................GCCTATATTCCGGGGATGCGTTCTC........2511.001000010
............................................................................................................................................................................................TAGCCTATATTCCGGGGATGCGTT...........2430.672200000
.................................................................................................................................................................................................TATATTCCGGGGATGCGTTCTCGTA.....2520.501100000
.................................................................................................................................................................................................TATATTCCGGGGATGCGTTCTCGTAGG...2720.501100000
............................................................................................................................................................................CGTGCCTCCGTACGTATAGCCTATATCG.......................2840.251100000
......................................................................................................................................................................................TACGTATAGCCTATATTCCGGGGAT................2540.251100000
..................................................................................................................................................................................TCCGTACGTATAGCCTATATTCCGGG...................2640.251100000
.....................................................................................................................................................................................................TTCCGGGGATGCGTTCTCGTAGGCCC26200.255200021
..................................................................................................................................................................................TCCGTACGTATAGCCTATATTCCGGGGA.................2840.251100000
..............................................................................................................................................................................TGCCTCCGTACGTATAGCCTATAT.........................2450.201000010
..............................................................................................................................................................................TGCCTCCGTACGTATAGCCT.............................2050.201000010
..............................................................................................................................................................................TGCCTCCGTACGTATAGCC..............................1950.201100000
...........................................................................................................................................................................TCGTGCCTCCGTACGTATAGCCTATATC........................2850.201100000
......................................................................................................................................................................................................TCCGGGGATGCGTTCTCGTAGG...22200.102200000
....................................................................................................................................................................................................ATTCCGGGGATGCGTTCTCGTAGGC..25200.102200000
.......................................................................................................................................................................GAAATCGTGCCTCCGTACG.....................................19200.051100000
droAna3
GCGGCA-CGAGGAG--------------GA----------------------------------TGTGC---------CGTGTTGGGCC-T------------T--------GATCTAGTGCATTTTCGTAGGCGGTGGCCAGCTGCATTAGTATTGCCAC----AAGAACTAGTGTCGGCCAATGAAAAGTTGGTACTCCAATAGTAAGATCTCGTAGATCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droKik1
GCGGCC-TGGCGTT--------------GA----------G---TCGGGATC-C----GGTTCTCGAGC---------GTTCTTCCGCC-T------------C--------GGCTGCGTGTCTCCTCGTAGTTGGTCACGAGATGCGTTAGCTCGGTCAGCGTACGGAAATCCTGCCTCCGGGTGTAGAGTTGATACTCCGGCAGCATATTTTCATAGATCCSizeHit CountTotal NormTotal
No Reads
droFic1
GTTGTT-CTT---A--------------A--AGTCCTCGATG--CTGTCATC-A----TTTGCGTATAG---------CGGCGTTGGTC-C------------C--------GGTCACGGGTAAATTCGAAGTCCGTCACCAGCTGGGTTAATTTCGCCAGCGATTCAAACTCGTGCCGTCGCGTGAAGAGTTGGTACTCTGGTAGGAGGTTTTCATAAATCCSizeHit CountTotal NormTotal
No Reads
droEle1
TCGGCAGTGGGGCC--------------GATG-------TTGCT---AAACCTTTGGTACCCGATGC----------------AAAGGGTCCGGATTGCTTCCA--------GTTTCCA---------------------CGGCTGCGTCAACTCGGTGAGCCTCTCAAAATCATTCCTCCGGGTGAATAGCTGGTATTCTGGCAGCATGTTTTCATAAACTCSizeHit CountTotal NormTotal
No Reads
droRho1
GTGGGA-CGGGCTC----------------------TCGATG--TCGTCATC-A----GCTGGGCATAT---------CTGTGTTGACC-C------------C--------GATCCCGGGTAACTTCGAAGTTCGTCACCAGCTGGGTCAATTGCGTCAGCGTCTCAAATTCATGTCGTCTCGTGAAAAGTTGGTACTCTGGGCGGAGATTTTCGTAGATCCSizeHit CountTotal NormTotal
No Reads
droBia1
CGGC-GCTGGCTGT------------------------GGTT--CTGTCAAC-A----TTCTGGCACGG---------CATCCTGTGGT-T------------C--------GATCGCGGGTGATCTCGTAGTTTACCTGTAATGTGGTAAGTTTCTCCAAAGTAGTGAAGTCGTGCCTCCTGGCGTACATCTGATACTCCGGTCGGAGATTTTCATAGATACSizeHit CountTotal NormTotal
No Reads
droTak1
GCGAA---------------------------GTCCTCGATG--TCGACATT-A----GCTGGGCGTAC---------CTGCGTTGGTT-T------------C--------GGTCCCGGGTTACCTCGAAGTTTGTCACTAGCTGGGTCAACTTTGTCAGAGTGTCAAACTCGTGCCGTCGCGTGAAAAGTTGATATTCTGGGAGGAGGTTTTCGTATATCCSizeHit CountTotal NormTotal
No Reads
droEug1
GCGGCT-GGT---G--------------GATG-------CGCCT---GTGCG-G----TGGTTTC--------------------------------------GGACTCCGCGGCTGCGGGCAACTTCGAAGTTGACCACCAAGTGTGTGAGTTCAGTCAGCGTTTTGAAACCTTGGCGTCGGGTGAACATCTGGTATTCAGGCAGCATGTTCTCATAGACCCSizeHit CountTotal NormTotal
No Reads
droSim2
TCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACTCGTGTCTCCTGGTGAAAAGCTGGTAATCCGACTGGAGCTTCTCATAAATCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................AACTCGTGTCTCCTGGTGAAAAGC...............................2411.00100000000001000000
droYak3
GCGTCA-GGACTCCGCTGTGGAGGACTAA--AACCCTCG-CG--C-------------TCCTG--ACGA---------CTGGATTGGTT-C-----------CGGTCTCCTCGGCTCCTAATTGTCTCAAAATCTACTACTAGCTAAGTCAGTTCAGCCAGTGCTCGAAAATCCTGACGCCGAGTGTACAGTTGGTACTCTGGCAACATATTT----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/15/2015 at 03:05 PM