ID:

dps_1920

 Coordinate:

Unknown_group_263:6155-6205 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dpse\GA23134-cds]; exon [dpse_GLEANR_11665:2]; exon [dpse_GLEANR_11665:3]; CDS [Dpse\GA23134-cds]; intron [Dpse\GA23134-in]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA+
mature
  1. Unknown_group_108:20357-20382 +
  2. Unknown_group_263:1149-1174 +
  3. dps_1920  Unknown_group_263:6179-6204 +
  4. Unknown_singleton_1158:384-409 -
  5. Unknown_singleton_2949:267-292 -
star

Sense Strand Reads

##################################################---------------------------------------------------##################################################
TGCCGGTCTGCAACCCCCACTTTCCCACAGCCGATTGGAAGGTGGCCAGGGTAGAGAACATCTAGGGGCAGAGGCGCCAGATTATCCTCGTTCTTTATGAGGAGTCGCTAGAGCACCTCGCCAAGACGGACGGTGTGGTCGACTACGGGTA
**************************************************(((((((((((((.((.((....)).)))))).......)))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 M059
embryo
 GSM343916
embryo
 V112
male body		 GSM444067
head
 SRR902012
CNS imaginal disc
.............................................................................................................................ACGGACGGTGTGGTCGACTACGG... 23 0 10 9.80 98 68 15 15 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTACG.... 22 0 11 5.27 58 46 7 4 0 0 0 1 0
.............................................................................................................................ACGGACGGTGTGGTCGACTAC..... 21 0 12 1.83 22 19 2 0 0 0 1 0 0
.............................GCCGATTGGAAGGTGGCCA....................................................................................................... 19 0 20 1.05 21 20 0 0 0 0 0 1 0
.............................................................................................................................ACGGACGGTGTGGTCGACTACGGG.. 24 0 8 1.00 8 4 3 1 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTA...... 20 0 12 0.92 11 10 1 0 0 0 0 0 0
..........................................................................CGCCAGATTATCCTCGTTCTTTATGA................................................... 26 0 5 0.80 4 1 3 0 0 0 0 0 0
..........................................................................................TTGTTTATGAGTAGTCGCTAGGGC..................................... 24 3 5 0.60 3 0 0 0 1 2 0 0 0
............................................................................................................TAGAGCACCTCGCCAAGACGGAC.................... 23 0 4 0.50 2 0 2 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTATGGTCGACTACGG... 23 1 10 0.40 4 3 1 0 0 0 0 0 0
.............................GCCGATTGGAAGGTGGCC........................................................................................................ 18 0 20 0.40 8 8 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTACGA... 23 1 11 0.36 4 3 0 0 0 1 0 0 0
..CCGGTCTGCAACCCCCACTTTCCCACA.......................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACT....... 19 0 12 0.33 4 4 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGAC........ 18 0 13 0.31 4 4 0 0 0 0 0 0 0
.........................CACAGCCGATTGGAAGGTGGC......................................................................................................... 21 0 20 0.30 6 6 0 0 0 0 0 0 0
.............................GCCGATTGGAAGGTGGCCAC...................................................................................................... 20 1 20 0.30 6 6 0 0 0 0 0 0 0
..............................................................................................................................CGGACGGTGTGGTCGACTACGG... 22 0 11 0.27 3 3 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTACGT... 23 1 11 0.27 3 1 2 0 0 0 0 0 0
.....................TTCCCACAGCCGATTGGAAGG............................................................................................................. 21 0 20 0.25 5 3 0 0 0 0 1 0 1
............................................................................................................TAGAGCACCTCGCCAAGACGGACGG.................. 25 0 4 0.25 1 0 0 1 0 0 0 0 0
.............................................................................................................................ACGGACGGTATGGTCGACTACGGG.. 24 1 8 0.25 2 0 1 1 0 0 0 0 0
............................................................................................................TAGAGCACCTCGCCAAGACGGACGGTG................ 27 0 4 0.25 1 0 1 0 0 0 0 0 0
........................................................................................................TCGCTAGAGCACCTCGCCAAGACGGA..................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTAA..... 21 1 12 0.25 3 0 3 0 0 0 0 0 0
..............................................................................................................................CGGACGGTGTGGTCGACTACG.... 21 0 12 0.25 3 3 0 0 0 0 0 0 0
........................................................................................................TCGCTAGAGCACCTCGCCAAGACGGACA................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTACGGT.. 24 1 10 0.20 2 1 0 1 0 0 0 0 0
..........................................................................................TTGTTTATGAGTAGTCGCTAGGG...................................... 23 3 5 0.20 1 0 0 0 1 0 0 0 0
........................CCACAGCCGATTGGAAGGTGGC......................................................................................................... 22 0 20 0.20 4 4 0 0 0 0 0 0 0
..............................................................................................................................CGGACGGTGTGGTCGACTAC..... 20 0 13 0.15 2 2 0 0 0 0 0 0 0
..............................................................................................................................CGGACGGTGTGGTCGACTA...... 19 0 13 0.15 2 2 0 0 0 0 0 0 0
......................TCCCACAGCCGATTGGAAGGT............................................................................................................ 21 0 20 0.15 3 3 0 0 0 0 0 0 0
......................TCCCACAGCCGATTGGAAGGTGG.......................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0
........................CCACAGCCGATTGGAAGGTGG.......................................................................................................... 21 0 20 0.15 3 2 0 0 0 0 1 0 0
......................TCCCACAGCCGATTGGAAGGTG........................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0
..............................CCGATTGGAAGGTGGCCA....................................................................................................... 18 0 20 0.15 3 3 0 0 0 0 0 0 0
.................................................................................................................................ACGGTATGGTCGACTACGG... 19 1 14 0.14 2 0 2 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTCCGGG.. 24 1 8 0.13 1 0 0 1 0 0 0 0 0
.............................................................................................................................ACGGACGGTAAGGTCGACTACGGG.. 24 2 8 0.13 1 0 0 1 0 0 0 0 0
.............................GCCGATTGGAAGGTGGCCT....................................................................................................... 19 1 20 0.10 2 2 0 0 0 0 0 0 0
.........................CACGGCCGATTGGAGGGTGGC......................................................................................................... 21 2 20 0.10 2 0 0 0 0 0 0 2 0
......................TCCCACAGCCGATTGGAAGGTGGCC........................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................CCCACAGCCGATTGGAAGGTG........................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0
...................................................................GCAGAGGCGCCAGATTATCCT............................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0
......................TCCCACAGCCGATTGGAAG.............................................................................................................. 19 0 20 0.10 2 2 0 0 0 0 0 0 0
......................TCCCACAGCCGATTGGAAGG............................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0
........................CCACAGCCGATTGGAAGGTGGCCA....................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGATGTGGTCGACTACG.... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGGGTGGTCGACTACG.... 22 1 11 0.09 1 0 0 0 1 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGGCGACTACGG... 23 1 11 0.09 1 0 1 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGAAT....... 19 1 12 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGTCGACTT...... 20 1 12 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTATGGTCGACTA...... 20 1 12 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGGCGACTACGT... 23 2 12 0.08 1 0 1 0 0 0 0 0 0
.............................................................................................................................ACGGACGGTGTGGGCGACTA...... 20 1 13 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................GGACGGTGTGGTCGACTACA.... 20 1 15 0.07 1 1 0 0 0 0 0 0 0
................................GATTGGAAGGTGGCAAGGG.................................................................................................... 19 1 17 0.06 1 0 0 1 0 0 0 0 0
..................................TTGGAAGGTGGTCAGGGTTGA................................................................................................ 21 2 18 0.06 1 0 0 0 0 0 1 0 0
.....................TTCCCACAGCCGATTGGAGGGT............................................................................................................ 22 1 20 0.05 1 0 0 0 0 0 0 1 0
.........................CACAGCCGATTGGAAGGTGGCC........................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
............................AGCCGATTGGAGGGTGGCC........................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 1 0 0
........................CAACAGCCGATTGGAAGGTGGCCA....................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
......................TCCCACAGACGATTGGAAGGTGGCCA....................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................CCCACAGCCGATTGGAAGGA............................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................CACAGCCGATTGGAGGGTGGT......................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 1 0 0
.....................TTCCCACAGCCGATTGGAAGGTGG.......................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
......................TCCCACAGCCGATTGGAAGGTGGCCA....................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................TTCCCACAGCCGATTGGAAG.............................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................CAGCCGATTGGAGGGTGGCCA....................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 1 0
........................CCACAGCCGATTGGAAGGTG........................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................CACAGCCGATTGGAGGGTGG.......................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................CAGAGGCGCCAGATTATCCTC.............................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................CAGCCGATTGGAAGGTGGT......................................................................................................... 19 1 20 0.05 1 0 0 0 0 0 1 0 0
...........................CAGCCGATTGGAAGGTGGCCA....................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
......................TCCCACAGCCGATTGGAAGGTGGC......................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................TTCCCACAGCCGATTGGAAGGT............................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................CACAGCCGATTGGAAGGTGGCTA....................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................CACAGCCGATTGGAAGGTG........................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
........................CCACAGCCGATTGGAAAGTGGC......................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................GCAGCCGATTGGAAGGTGGC......................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................CCCACAGCCGATTGGAGGGT............................................................................................................ 20 1 20 0.05 1 0 0 0 0 0 1 0 0
.....................TTCCCACAGACGATTGGAAGGTGGCC........................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................CCCACAGCCGATTGGAAGGTGGC......................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................ACAGCCGATTGGAAGGTGGCCT....................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
............................AGCCGATTGGAAGGTGGCCA....................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................TTCCCACAGCCGATTGGAAGGTG........................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................ACAGCCGATTGGAAGGTGGCT........................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACGGCCAGACGTTGGGGGTGAAAGGGTGTCGGCTAACCTTCCACCGGTCCCATCTCTTGTAGATCCCCGTCTCCGCGGTCTAATAGGAGCAAGAAATACTCCTCAGCGATCTCGTGGAGCGGTTCTGCCTGCCACACCAGCTGATGCCCAT
**************************************************(((((((((((((.((.((....)).)))))).......)))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 SRR902010
ovaries
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM444067
head
....................AAAGGGTGTCGGCTAACCT................................................................................................................ 19 0 1 17.00 17 17 0 0 0 0 0 0
..................AAAAAGGGTGTCGGCTAACCT................................................................................................................ 21 2 1 12.00 12 12 0 0 0 0 0 0
...................AAAAGGGTGTCGGCTAACCT................................................................................................................ 20 1 1 5.00 5 5 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 24 0 20 4.65 93 92 0 0 1 0 0 0
....................AAAAGGTGTCGGCTAACCT................................................................................................................ 19 1 1 4.00 4 4 0 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAAT................................................................... 19 0 20 2.20 44 42 0 0 2 0 0 0
...................GAAAGGGTGTCGGCTAACCT................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0
..................AAAAAGGGTGTCGGCTAACC................................................................................................................. 20 2 1 2.00 2 2 0 0 0 0 0 0
...............................................................TCCCCGTCTCCGCGGTCTAAT................................................................... 21 0 16 1.75 28 28 0 0 0 0 0 0
................................................................CCCCGTCTCCGCGGTCTAAT................................................................... 20 0 17 1.59 27 19 0 0 8 0 0 0
.................AAAAAAGGGTGTCGGCTAACCT................................................................................................................ 22 3 2 1.50 3 3 0 0 0 0 0 0
..............................................................................................................CTCGTGGAGCGGTTCTGCCTGCCAC................ 25 0 4 1.25 5 5 0 0 0 0 0 0
................GGTGAAAGAGTGTCGGCTAACCT................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................GGAGCGCTTCTGCCTGCCAC................ 20 1 14 1.00 14 14 0 0 0 0 0 0
..................TGAAAGGTTGTCGGCTAACCT................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0
.................GTGAAAGGTTGTCGGCTAACCT................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
...............GGGTGAGAGGTTGTCGGCTAACCT................................................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0
.....................AAGGGTGTCGGCTAACCT................................................................................................................ 18 0 20 0.95 19 18 1 0 0 0 0 0
...................................................................................................................GGAGCGGTTCTGCCTGCCAC................ 20 0 7 0.86 6 4 0 2 0 0 0 0
.........................GTGTCGGCTAACCTTCCACCGGT....................................................................................................... 23 0 20 0.85 17 17 0 0 0 0 0 0
..................................................................................................................TGGAGCGGTTCTGCCTGCCAC................ 21 0 6 0.83 5 4 0 0 0 1 0 0
....................AAAGGATGTCGGCTAACCT................................................................................................................ 19 1 16 0.81 13 12 0 0 0 1 0 0
....................AAATGGTGTCGGCTAACCT................................................................................................................ 19 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................ATTCCCGTCTCCGCGGTCTAAT................................................................... 22 1 14 0.50 7 6 0 1 0 0 0 0
....................................................................GTCTCCGCGGTCTAATAGGAG.............................................................. 21 0 20 0.40 8 8 0 0 0 0 0 0
...................AAAAGGATGTCGGCTAACCT................................................................................................................ 20 2 16 0.38 6 6 0 0 0 0 0 0
...........................................................................................................................TCTGCCTGCCACACCAGCTGATGCCT.. 26 1 11 0.36 4 4 0 0 0 0 0 0
...............................................................................................................TCGTGGAGCGGTTCTGCCTGCCAC................ 24 0 6 0.33 2 2 0 0 0 0 0 0
.........................................CACCGGTCCCATCTCTTGTAGAT....................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
....................AAAAAGTGTCGGCTAACCTT............................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0
ACGGCCAGACGTTGGGGGTGAAAGGGT............................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0
.................GTGAAAGGATGTCGGCTAACCT................................................................................................................ 22 1 16 0.31 5 1 2 1 0 0 1 0
.......................GGGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 25 0 20 0.30 6 6 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTCCACCGG........................................................................................................ 23 0 20 0.30 6 6 0 0 0 0 0 0
.............................................................GATCCCCGTCTCCGCGGTCTAA.................................................................... 22 0 4 0.25 1 1 0 0 0 0 0 0
.................................................................AACGTCTCCGCGGTCTAAT................................................................... 19 2 20 0.25 5 5 0 0 0 0 0 0
.............................................................GATCCCCGTCTCCGCGGTCTAAT................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTTCACCGGT....................................................................................................... 24 1 20 0.25 5 5 0 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAATAGG................................................................ 22 0 20 0.25 5 4 0 0 1 0 0 0
....................AAAGGGTGTCGGCTAACTT................................................................................................................ 19 1 4 0.25 1 1 0 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAA.................................................................... 18 0 20 0.25 5 5 0 0 0 0 0 0
......................................................................................................TCAGCGATCTCGTGGAGCGGTTCT......................... 24 0 4 0.25 1 1 0 0 0 0 0 0
..........................................................GTAGATCCCCGTCTCCGCGGTCTAAT................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
...................................................................CGTCTCCGCGGTCTAATAGGAGC............................................................. 23 0 20 0.25 5 5 0 0 0 0 0 0
............................................................................................................ATCTCGTGGAGCGGTTCTGCCTGCCAC................ 27 0 4 0.25 1 1 0 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAATAG................................................................. 21 0 20 0.25 5 5 0 0 0 0 0 0
..............................................................................................................CTCGTGGAGCGGTTCTGCCTGCCA................. 24 0 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................................GATCTCGTGGAGCGGTTCTGCCTGCCAC................ 28 0 4 0.25 1 1 0 0 0 0 0 0
.................GGGAAAGGAGGTCGGCTAACCT................................................................................................................ 22 3 17 0.24 4 0 4 0 0 0 0 0
..............................................................................................................................GCCTGCCACACCAGCTGATGCCCAT 25 0 9 0.22 2 2 0 0 0 0 0 0
....................................................................................................................GAGCGCTTCTGCCTGCCAC................ 19 1 14 0.21 3 3 0 0 0 0 0 0
...................................................................CGTCTCCGCGGTCTAATAGG................................................................ 20 0 20 0.20 4 4 0 0 0 0 0 0
........................................................................CCGCGGTCTAATAGGAGCAAGAAAT...................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0
..................GGAGGGGGTGTCGGCTAACCT................................................................................................................ 21 3 5 0.20 1 0 1 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAATAGGAG.............................................................. 24 0 20 0.20 4 4 0 0 0 0 0 0
...................AAAAAAGTGTCGGCTAACCTT............................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0
......................................................................CTCCGCGGTCTAATAGGAGCAAGAAAT...................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0
..............................................................TTCCCCGTCTCCGCGGTCTAAT................................................................... 22 1 16 0.19 3 3 0 0 0 0 0 0
.................................................................................................................GTGGAGCGGTTCTGCCTGCCAC................ 22 0 6 0.17 1 1 0 0 0 0 0 0
.........................................................................................................................GTTCTGCCTGCCACACCAGCTGAT...... 24 0 6 0.17 1 1 0 0 0 0 0 0
........................................................................................................................GGTTCTGCCTGCCACACCAGCTGAT...... 25 0 6 0.17 1 1 0 0 0 0 0 0
................................................................................................................CGTGGAGCGGTTCTGCCTGCCA................. 22 0 6 0.17 1 1 0 0 0 0 0 0
...................................................................................................................GGAGCGGTTCTGCCTGCCACACCA............ 24 0 6 0.17 1 1 0 0 0 0 0 0
...................................................................................................................GGAGCGGTTCTGCCTGCCACACCAGCTG........ 28 0 6 0.17 1 1 0 0 0 0 0 0
...........................................................................................................................TCTGCCTGCCATACCAGCTGATGCCC.. 26 1 6 0.17 1 1 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTCCACC.......................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0
......................................................................CTCCGCGGTCTAATAGGAGCA............................................................ 21 0 20 0.15 3 3 0 0 0 0 0 0
..................................................................................................................TGGAGCGGTTTTGCCTGCCAC................ 21 1 14 0.14 2 1 0 0 0 0 1 0
..................AAAAAGGGTGTCGGCTAATCT................................................................................................................ 21 3 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................................GAGCGGTTCTGCCTGCCAC................ 19 0 7 0.14 1 1 0 0 0 0 0 0
.................GGGAAAGGGGGTCGGCTAGCCT................................................................................................................ 22 3 7 0.14 1 0 0 1 0 0 0 0
................GGTGAAAGGATGTCGGCTAACCT................................................................................................................ 23 1 15 0.13 2 0 1 1 0 0 0 0
................GGGGAAAGGATGTCGGCTAACCT................................................................................................................ 23 2 15 0.13 2 0 1 1 0 0 0 0
................................................................CCCCGTCTCCGCGGTCTAA.................................................................... 19 0 17 0.12 2 2 0 0 0 0 0 0
...........TTGGGGGAGAAAGGGTTT.......................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 1 0
...............................................................................................................................CCTGCCACACCAGCTGATGCCCAT 24 0 9 0.11 1 1 0 0 0 0 0 0
......................AGGGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0
................................................................ACCCGTCTCCGCGGTCTAAT................................................................... 20 1 20 0.10 2 2 0 0 0 0 0 0
.....................AAGGGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0
.....................AAAGGTGTCGGCTAACCT................................................................................................................ 18 1 20 0.10 2 2 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTTCACCGG........................................................................................................ 23 1 20 0.10 2 2 0 0 0 0 0 0
...................................................................CGTCTCCGCGGTCTAATAGGAGCA............................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0
......................AGGGTGTCGGCTAACCTTCCAC........................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0
.....................AAGGGTGTCGGCTAACCTT............................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0
.......................GGGTGTCGGCTAACCTTCCACC.......................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0
.......................................................................TCCGCGGTCTAATAGGAGCA............................................................ 20 0 20 0.10 2 2 0 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAATA.................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0
.......................AGGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 25 1 20 0.10 2 2 0 0 0 0 0 0
....................AAATGGTGTAGGCTAACGTT............................................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0
.......................................................TTTGTAGGTCCCCGTCTCCGCGGT........................................................................ 24 2 13 0.08 1 1 0 0 0 0 0 0
..........GTTGGGGGTGAAAGGTTA........................................................................................................................... 18 2 13 0.08 1 0 0 0 0 1 0 0
...............GGGTGAAGGGATGTCGGCTAACCT................................................................................................................ 24 2 14 0.07 1 0 1 0 0 0 0 0
...............GGGGGAAAGGATGTCGGCTAACCT................................................................................................................ 24 2 14 0.07 1 0 1 0 0 0 0 0
..........CTTGGGGGTAAAAGGGTG........................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 1
...................AAAAATGTGTCGGCTAACCT................................................................................................................ 20 3 14 0.07 1 1 0 0 0 0 0 0
................................................................CCCCGTCTCCGCGGTCTAATAGGAGCA............................................................ 27 0 14 0.07 1 1 0 0 0 0 0 0
...................................................................................................................GGAGCGCTTCTGCCTGCCA................. 19 1 14 0.07 1 1 0 0 0 0 0 0
...............GGGTGAAAGGATGTCGGCTAACCTT............................................................................................................... 25 1 14 0.07 1 1 0 0 0 0 0 0
...............GGGTGAAAGGATGTCGGCTAACCT................................................................................................................ 24 1 14 0.07 1 0 1 0 0 0 0 0
................................................................CCCCGTCTCCGCGGTCTAATAGGAG.............................................................. 25 0 14 0.07 1 1 0 0 0 0 0 0
............................................................AAATTCCCGTCTCCGCGGTCTAAT................................................................... 24 2 15 0.07 1 1 0 0 0 0 0 0
..............................................................AATCCCGTCTCCGCGGTCTAAT................................................................... 22 2 15 0.07 1 1 0 0 0 0 0 0
...............GGGGGAAAGGAGGTCGGCTAACCT................................................................................................................ 24 3 15 0.07 1 0 1 0 0 0 0 0
................GGTGAACGGATGTCGGCTAACCT................................................................................................................ 23 2 15 0.07 1 0 1 0 0 0 0 0
.................GTGAAGGGATGTCGGCTAACCT................................................................................................................ 22 2 16 0.06 1 0 1 0 0 0 0 0
................GGTGAAAGGAGGTCGGCTAACCTT............................................................................................................... 24 2 16 0.06 1 0 1 0 0 0 0 0
................GTTGAAAGGATGTCGGCTAACCT................................................................................................................ 23 2 16 0.06 1 0 1 0 0 0 0 0
.................GGGAAAGGATGTCGGCTAACCT................................................................................................................ 22 2 16 0.06 1 0 1 0 0 0 0 0
...................GAAAGGATGTCGGCTAACCT................................................................................................................ 20 1 16 0.06 1 0 1 0 0 0 0 0
...............................................................TCCCCGTCTCCGCGGTCTAATA.................................................................. 22 0 16 0.06 1 1 0 0 0 0 0 0
...................AAAAGGATGTCGGCTAACC................................................................................................................. 19 2 16 0.06 1 1 0 0 0 0 0 0
........ACGTGGGTGGTGACAGGGTGT.......................................................................................................................... 21 3 17 0.06 1 1 0 0 0 0 0 0
................................................................CCCAGTCTCCGCGGTCTAAT................................................................... 20 1 17 0.06 1 1 0 0 0 0 0 0
.................GTGAAAGGAGGTCGGCTAACCT................................................................................................................ 22 2 17 0.06 1 0 1 0 0 0 0 0
..................GGAAATGATGTCGGCTAACCT................................................................................................................ 21 3 18 0.06 1 1 0 0 0 0 0 0
....................AAAGGTTGTCGCCTAACCT................................................................................................................ 19 2 18 0.06 1 1 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTCCAGCGGT....................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
..................................................................CCGTCTCCGCGGTCTAATA.................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0
.........................GTGTCGGCTAACCTTCCACCGGTG...................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTCCACCGGG....................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
.......................AAGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0 0
....................................................................GTCTCCGCGGTCTGATAGGAG.............................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0
..........................TGTCGGCTAACCTTCCACCGG........................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0
........................TGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
.........................GTGTCGGCTAACCTTCCACCGTT....................................................................................................... 23 1 20 0.05 1 0 0 0 1 0 0 0
.....................................................................TCTCCGCGGTCTAATAGGAGC............................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0
................................................................AACCGTCTCCGCGGTCTAAT................................................................... 20 2 20 0.05 1 1 0 0 0 0 0 0
......................AAGGTGTCGGCTAACCTT............................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0
................................................................ACCCGTCTCCGCGGTCTAA.................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0
........................GGTGTCGCCTAACCTTCCACCGGT....................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
......................GGGGTGTCGGCTAACCTTCC............................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 1
..................................................................ACGTCTCCGCGGTCTAAT................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0
.....................AAGGGTGTCGGCTAACCTTC.............................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................CCGTCTCCGCGGTCTAATAGG................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0
....................................................................TTCTCCGCGGTCTAATAGGA............................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0
....................................................................GTCTCCGCGGTCTAATAGG................................................................ 19 0 20 0.05 1 1 0 0 0 0 0 0
........................GGTGTCGGCTAACCTTCCACCG......................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................CCCGTCTCCGCGGTCTAATAGGAGCA............................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................ACCGTCTCCGCGGTCTAAT................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0
...................................................................CGTCTCCGCGATCTAATCGG................................................................ 20 2 20 0.05 1 1 0 0 0 0 0 0
........................AGTGTCGGCTAACCTTCCACCGGT....................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
..................................................................CCGTCTCCGCGGTCTAATCTGG............................................................... 22 3 20 0.05 1 0 0 0 1 0 0 0
......................AGGGTGTCGGCTAACCTTCCACC.......................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0
.....................AAGGGTGTCGGCTAACCTTCC............................................................................................................. 21 0 20 0.05 1 0 0 0 0 1 0 0
.....................AAGGGTGTCGGCTAACCTTCCACCGG........................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0
.........................GTGTCGGCTAACCTTCCACCGG........................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0
..........................TGTCGGCTAACCTTCCACC.......................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0
.........................GTGTCGGCTAACCTTCCACC.......................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_263:6105-6255 + dps_1920 TGCCGGTCTGCAACCCCCACTTTCCCACAGCCGATTGGAAGGTGGCCAGGGTAGAGAACATCTAGGGGCAGAGGCGCCAGATTATCCTCGTTCTTTATGAGGAGTCGCTAGAGCACCTCGCCAAGACGGACGGTGTGGTCGACTACGGGTA------------------------
droPer2 scaffold_43:161402-161552 + TGCCGGTCTGCAACCCCCACCTTCCCACAGCCGATTGGAAGGTGGCCAGGGTAGAGAACATCTAGGGGCAGAGGCGCCAGATTATCCTCGTTCTTTATGAGGAGTCGCTAGAGCACCTCGCCAAGACGGACGGTGTGGTCGACTACGGGTA------------------------
droMoj3 scaffold_6500:17457295-17457410 + TGCAACTATGCAATCCGCAGCTGCCAACTCACGATTGGAAAGTGGTCAAAGTGGAGGCGAACGAAGGAGCCGCAAATCAGGTGGTTCTAGTGTTGAACAAGGAATCATTGGCACCT-----------------------------------------------------------
droGri2 scaffold_15116:175160-175310 - TGCAGCTATGCAACCCCTCTCTTCCCACCCATGATTGGAGGGTGGTGAAGATTGAAACCACCGATGGGCCAACCAATCAGGCTGTGCTGGTCCTGAACAAGGAATCGCTAGCCCCCATCGAAGCCGCCAAGGGCGAGCTCAATTTCGGCTT------------------------
droAna3 scaffold_13260:1165518-1165662 + T------CTGCAATCCCACACTCCCTACGGCGGACTGGAGGGTCGCCAAGGTGGAGGAAGCAGTGCGACTGAGAAGGCAGGTTGTCCTCACTCTTAATGAGGAGACTGCGAAGATCCTGGAGGGTGCCGGTAGGCGTATCAAATACGGGTT------------------------
droBip1 scf7180000395751:275587-275737 - TGCAGCTCTGCAACCCGGAGATTCCAACTGCCAACTGGCGGGTGGTCAAGGTGGAGAAGGCCTCCGGGCCGTCGCGGCAGGTAGTGCTTCTCCTGGACAACGATTCGGCCGATATGGTGATCAAGGCGGGCAATGTGGTCCGGTACGGCTT------------------------
droEle1 scf7180000489666:21266-21416 + TGCAGAGGTGCAGCCCAAGCCTCCCCACGCACGACTGGAAGGTGGAAAAGGTGGACCAGCATGAGGGGCCGGTTAGTCAGGCCATCGTCGTGCTAAACAAGGAATTAGTTACCCCAATAGAGGCTGCTCACGGGGAACTGAATTTCGGGTT------------------------
droRho1 scf7180000773772:565-715 + TGCAAGAATGCAACCCACATCTCCCCACAAAAGACTGGAAAGTCGTTAAGGTGGAGGAGCACGTAGGTGACGTGAACCAAGCGATCATGGTACTAAATAAGGAGTCGGTCGCACCCATAGAGGCTGCTCGGGGAACGCTCAACTATGGGTT------------------------
droBia1 scf7180000299508:3218-3384 + TGCAGGAATGCAACCCGCAACTCCCCAC--------GAAAAGTCGTCAGGGTGGAGGAGACAGAAGAGGATGTTAACCAGGCAATCGTAGTCCTGAACAAGGAGTGGGTAGCTCTAATCGAAGCTGCTCGAGAAGTGCTGAACTTCGCTTTCAGTGCCACTCCTGCCAACATTTA
droTak1 scf7180000415698:3278-3428 - TGCAAGTCTGCAATCCGCACCTCCCCACGAAGGACTGGAGAGTCGTCAAGGTGGAGGAACACGAAGGGGACGTAAACCAGGCGGTCTTGGTCCTAAATAAGGAGTCGGTGGCGCCAATCGAGGATGCTCAAGGAAAGCTGAACTTCGGGTT------------------------
droYak3 v2_chr2L_random_001:36579-36729 + TGCAGCGCTGCAATCCGCACCTTCCCACCTCGGACTGGCGAGTGGTAAAGGTCGACGAAATGGAGGGACCAATAAACCAGGCTATCCTCATTCTAAACAAGGAGTCCCTAGCTCCCATTGAGGCCGCTCACGGGGAGCTAAACTTCGGGTT------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGCCGGTCTGCAACCCCCACTTTCCCACAGCCGATTGGAAGGTGGCCAGGGTAGAGAACATCTAGGGGCAGAGGCGCCAGATTATCCTCGTTCTTTATGAGGAGTCGCTAGAGCACCTCGCCAAGACGGACGGTGTGGTCGACTACGGGTA------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................ACGGACGGTGTGGTCGACTACGG...........................23109.80980680000015150
.............................................................................................................................ACGGACGGTGTGGTCGACTACG............................22115.275804600010740
.............................................................................................................................ACGGACGGTGTGGTCGACTAC.............................21121.832201900001200
.............................GCCGATTGGAAGGTGGCCA...............................................................................................................................19201.052102000010000
.............................................................................................................................ACGGACGGTGTGGTCGACTACGGG..........................2481.0080400000310
.............................................................................................................................ACGGACGGTGTGGTCGACTA..............................20120.921101000000100
..........................................................................CGCCAGATTATCCTCGTTCTTTATGA...........................................................................2650.8040100000300
............................................................................................................TAGAGCACCTCGCCAAGACGGAC............................................2340.5020000000200
.............................GCCGATTGGAAGGTGGCC................................................................................................................................18200.4080800000000
.............................................................................................................................ACGGACGGTGTGGTCGACTACGA...........................23110.3640300100000
..CCGGTCTGCAACCCCCACTTTCCCACA..................................................................................................................................................2730.3310100000000
.............................................................................................................................ACGGACGGTGTGGTCGACT...............................19120.3340400000000
.............................................................................................................................ACGGACGGTGTGGTCGAC................................18130.3140400000000
.........................CACAGCCGATTGGAAGGTGGC.................................................................................................................................21200.3060600000000
.............................GCCGATTGGAAGGTGGCCAC..............................................................................................................................20200.3060600000000
..............................................................................................................................CGGACGGTGTGGTCGACTACGG...........................22110.2730300000000
.............................................................................................................................ACGGACGGTGTGGTCGACTACGT...........................23110.2730100000200
.....................TTCCCACAGCCGATTGGAAGG.....................................................................................................................................21200.2550300001001
............................................................................................................TAGAGCACCTCGCCAAGACGGACGG..........................................2540.2510000000010
............................................................................................................TAGAGCACCTCGCCAAGACGGACGGTG........................................2740.2510000000100
........................................................................................................TCGCTAGAGCACCTCGCCAAGACGGA.............................................2640.2510000000100
.............................................................................................................................ACGGACGGTGTGGTCGACTAA.............................21120.2530000000300
..............................................................................................................................CGGACGGTGTGGTCGACTACG............................21120.2530300000000
........................................................................................................TCGCTAGAGCACCTCGCCAAGACGGACA...........................................2840.2510100000000
.............................................................................................................................ACGGACGGTGTGGTCGACTACGGT..........................24100.2020100000010
........................CCACAGCCGATTGGAAGGTGGC.................................................................................................................................22200.2040400000000
..............................................................................................................................CGGACGGTGTGGTCGACTAC.............................20130.1520200000000
..............................................................................................................................CGGACGGTGTGGTCGACTA..............................19130.1520200000000
......................TCCCACAGCCGATTGGAAGGT....................................................................................................................................21200.1530300000000
......................TCCCACAGCCGATTGGAAGGTGG..................................................................................................................................23200.1530300000000
........................CCACAGCCGATTGGAAGGTGG..................................................................................................................................21200.1530200001000
......................TCCCACAGCCGATTGGAAGGTG...................................................................................................................................22200.1530300000000
..............................CCGATTGGAAGGTGGCCA...............................................................................................................................18200.1530300000000
.............................GCCGATTGGAAGGTGGCCT...............................................................................................................................19200.1020200000000
......................TCCCACAGCCGATTGGAAGGTGGCC................................................................................................................................25200.1020200000000
.......................CCCACAGCCGATTGGAAGGTG...................................................................................................................................21200.1020200000000
...................................................................GCAGAGGCGCCAGATTATCCT.......................................................................................21200.1020200000000
......................TCCCACAGCCGATTGGAAG......................................................................................................................................19200.1020200000000
......................TCCCACAGCCGATTGGAAGG.....................................................................................................................................20200.1020200000000
........................CCACAGCCGATTGGAAGGTGGCCA...............................................................................................................................24200.1020200000000
.............................................................................................................................ACGGACGGTGTGGTCGACTT..............................20120.0810100000000
...............................................................................................................................GGACGGTGTGGTCGACTACA............................20150.0710100000000
.........................CACAGCCGATTGGAAGGTGGCC................................................................................................................................22200.0510100000000
.......................CCCACAGCCGATTGGAAGGA....................................................................................................................................20200.0510100000000
.....................TTCCCACAGCCGATTGGAAGGTGG..................................................................................................................................24200.0510100000000
......................TCCCACAGCCGATTGGAAGGTGGCCA...............................................................................................................................26200.0510100000000
.....................TTCCCACAGCCGATTGGAAG......................................................................................................................................20200.0510100000000
........................CCACAGCCGATTGGAAGGTG...................................................................................................................................20200.0510100000000
....................................................................CAGAGGCGCCAGATTATCCTC......................................................................................21200.0510100000000
...........................CAGCCGATTGGAAGGTGGT.................................................................................................................................19200.0510000001000
...........................CAGCCGATTGGAAGGTGGCCA...............................................................................................................................21200.0510100000000
......................TCCCACAGCCGATTGGAAGGTGGC.................................................................................................................................24200.0510100000000
.....................TTCCCACAGCCGATTGGAAGGT....................................................................................................................................22200.0510100000000
.........................CACAGCCGATTGGAAGGTG...................................................................................................................................19200.0510100000000
.......................CCCACAGCCGATTGGAAGGTGGC.................................................................................................................................23200.0510100000000
..........................ACAGCCGATTGGAAGGTGGCCT...............................................................................................................................22200.0510100000000
............................AGCCGATTGGAAGGTGGCCA...............................................................................................................................20200.0510100000000
.....................TTCCCACAGCCGATTGGAAGGTG...................................................................................................................................23200.0510100000000
..........................ACAGCCGATTGGAAGGTGGCT................................................................................................................................21200.0510100000000
droPer2
TGCCGGTCTGCAACCCCCACCTTCCCACAGCCGATTGGAAGGTGGCCAGGGTAGAGAACATCTAGGGGCAGAGGCGCCAGATTATCCTCGTTCTTTATGAGGAGTCGCTAGAGCACCTCGCCAAGACGGACGGTGTGGTCGACTACGGGTA------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................GCCGATTGGAAGGTGGCCAGGGTAGA........................................................................................................................2611.001010000
.............................................................................................................................ACGGACGGTGTGGTCGACTACG............................22200.459090000
.............................................................................................................................ACGGACGGTGTGGTCGACTACGG...........................23200.357070000
.............................................................................................................................ACGGACGGTGTGGTCGACTAC.............................21200.102020000
..............................................................................................................................CGGACGGTGTGGTCGACTACGG...........................22200.102020000
.............................................................................................................................ACGGACGGTGTGGTCGACTACGGGT.........................25130.081010000
.............................................................................................................................ACGGACGGTGTGGTCGACTA..............................20200.051010000
...............................................................AGGGGCAGAGGCGCCAGATTATAAA.......................................................................................25200.051010000
......TCTGCAACCCCCACCTTCCCACAGCCGA.............................................................................................................................................28200.051010000
......TCTGCAACCCCCACCTTCCC.....................................................................................................................................................20200.051100000
..........................ACAGCCGATTGGAAGGTGGCCA...............................................................................................................................22200.051010000
droMoj3
TGCAACTATGCAATCCGCAGCTGCCAACTCACGATTGGAAAGTGGTCAAAGTGGAGGCGAACGAAGGAGCCGCAAATCAGGTGGTTCTAGTGTTGAACAAGGAATCATTGGCACCT-----------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGCAGCTATGCAACCCCTCTCTTCCCACCCATGATTGGAGGGTGGTGAAGATTGAAACCACCGATGGGCCAACCAATCAGGCTGTGCTGGTCCTGAACAAGGAATCGCTAGCCCCCATCGAAGCCGCCAAGGGCGAGCTCAATTTCGGCTT------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
T------CTGCAATCCCACACTCCCTACGGCGGACTGGAGGGTCGCCAAGGTGGAGGAAGCAGTGCGACTGAGAAGGCAGGTTGTCCTCACTCTTAATGAGGAGACTGCGAAGATCCTGGAGGGTGCCGGTAGGCGTATCAAATACGGGTT------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............TCCCACACTCCCTACGGCGGACTGG.........................................................................................................................................25201.50303000000
.............TCCCACACTCCCTACGGCGGACT...........................................................................................................................................23201.25252320000
T------CTGCAATCCCACACTCCCTACGG.................................................................................................................................................24201.20242220000
T------CTGCAATCCCACACTCCCTACGGC................................................................................................................................................25201.05211740000
T------CTGCAATCCCACACTCCCTACGGCG...............................................................................................................................................26200.90181800000
..........................................................................................................TGCGAAGATCCTGGAGGGTGCCGG.............................................24200.50101000000
T------CTGCAATCCCACACTCCCTACGGCGGAC............................................................................................................................................29200.459900000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAATGA...........................................................................27200.459900000
........................................................................................................ACTGCGAAGATCCTGGAGGGTGC................................................23200.408602000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAAT.............................................................................25200.357610000
T------CTGCAATCCCACACTCCCTACGGCGG..............................................................................................................................................27200.357700000
.....................................................................................................GAGACTGCGAAGATCCTGGAGG....................................................22200.306510000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAATG............................................................................26200.306600000
.........................................................................AAGGCAGGTTGTCCTCACTCTTA...............................................................................23200.255320000
..............CCCACACTCCCTACGGCGGACTGG.........................................................................................................................................24200.204400000
........TGCAATCCCACACTCCCTACGG.................................................................................................................................................22200.204400000
T------CTGCAATCCCACACTCCCTAC...................................................................................................................................................22200.204310000
..........................................................................................................TGCGAAGATCCTGGAGGGTGCCGGTA...........................................26200.204400000
...................................TGGAGGGTCGCCAAGGTGGAG.......................................................................................................................21200.204013000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAATGAG..........................................................................28200.153300000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAA..............................................................................24200.153300000
........................................................................................................ACTGCGAAGATCCTGGAGGG...................................................20200.153300000
........................................................................................................ACTGCGAAGATCCTGGAGGGTG.................................................22200.153030000
................CACACTCCCTACGGCGGACTGGAGG......................................................................................................................................25200.102200000
.........................................................................AAGGCAGGTTGTCCTCACTCTT................................................................................22200.102200000
..........................................................................AGGCAGGTTGTCCTCACTCTTAA..............................................................................23200.102200000
T------CTGCAATCCCACACTCCCTACG..................................................................................................................................................23200.102020000
.......CTGCAATCCCACACTCCCTACGG.................................................................................................................................................23200.102200000
T------CTGCAATCCCACACTCCCTA....................................................................................................................................................21200.102200000
T------CTGCAATCCCACACTCCCTACGT.................................................................................................................................................24200.102200000
........................................................................................................ACTGCGAAGATCCTGGAGGGTGCC...............................................24200.102200000
....................................GGAGGGTCGCCAAGGTGGAGGAAG...................................................................................................................24200.102200000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAATGT...........................................................................27200.051100000
....................CTCCCTACGGCGGACTGGAGG......................................................................................................................................21200.051100000
..................................................................GACTGAGAAGGCAGGTTGTC.........................................................................................20200.051000010
...................................TGGAGGGTCGCCAAGGTGGAGGAAA...................................................................................................................25200.051010000
.................................ACTGGAGGGTCGCCAAGGTGGAGGAAA...................................................................................................................27200.051100000
.............................................................................................................GAAGATCCTGGAGGGTGCCGG.............................................21200.051100000
..........................................................................AGGCAGGTTGTCCTCACTCTTA...............................................................................22200.051100000
................................GACTGGAGGGTCGCCAAGGTGGAG.......................................................................................................................24200.051001000
.........................................GTCGCCAAGGTGGAGGAAGCAGT...............................................................................................................23200.051100000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAATT............................................................................26200.051100000
..............................................................................................................AAGATCCTGGAGGGTGCCGGC............................................21200.051010000
......................CCCTACGGCGGACTGGAGG......................................................................................................................................19200.051100000
.........................................................................................................CTGCGAAGATCCTGGAGGG...................................................19200.051100000
..................CACTCCCTACGGCGGACTGGAGG......................................................................................................................................23200.051001000
......................................................................................................AGACTGCGAAGATCCTGGAGG....................................................21200.051010000
........................................GGTCGCCAAGGTGGAGGAAGC..................................................................................................................21200.051001000
..........................................................................AGGCAGGTTGTCCTCACTCTT................................................................................21200.051100000
........................................................................................................ACTGCGAAGATCCTGGAGGGTGCCT..............................................25200.051010000
T------CTGCAATCCCACACTCCCTACGGCC...............................................................................................................................................26200.051001000
................................GACTGGAGGGTCGCCAAGGTG..........................................................................................................................21200.051001000
..............................CGGACTGGAGGGTCGCCAAGGT...........................................................................................................................22200.051100000
.........................................................................AAGGCAGGTTGTCCTCACTCTTT...............................................................................23200.051100000
.........................................................................AAGGCAGGTTGTCCTCACTCTTAATGTT..........................................................................28200.051100000
..........CAATCCCACACTCCCTACGGCGGACTG..........................................................................................................................................27200.051100000
..........................................................................AGGCAGGTTGTCCTCACTCTTAAT.............................................................................24200.051100000
............................................GCCAAGGTGGAGGAAGCAGTG..............................................................................................................21200.051100000
........TGCAATCCCACACTCCCTACGGCG...............................................................................................................................................24200.051100000
...................................TGGAGGGTCGCCAAGGTGGAGGAT....................................................................................................................24200.051100000
................................GACTGGAGGGTCGCCAAGGTGG.........................................................................................................................22200.051001000
T------CTGCAATCCCACACTCCCTACGTTT...............................................................................................................................................26200.051100000
droBip1
TGCAGCTCTGCAACCCGGAGATTCCAACTGCCAACTGGCGGGTGGTCAAGGTGGAGAAGGCCTCCGGGCCGTCGCGGCAGGTAGTGCTTCTCCTGGACAACGATTCGGCCGATATGGTGATCAAGGCGGGCAATGTGGTCCGGTACGGCTT------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGCAGAGGTGCAGCCCAAGCCTCCCCACGCACGACTGGAAGGTGGAAAAGGTGGACCAGCATGAGGGGCCGGTTAGTCAGGCCATCGTCGTGCTAAACAAGGAATTAGTTACCCCAATAGAGGCTGCTCACGGGGAACTGAATTTCGGGTT------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGCAAGAATGCAACCCACATCTCCCCACAAAAGACTGGAAAGTCGTTAAGGTGGAGGAGCACGTAGGTGACGTGAACCAAGCGATCATGGTACTAAATAAGGAGTCGGTCGCACCCATAGAGGCTGCTCGGGGAACGCTCAACTATGGGTT------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGCAGGAATGCAACCCGCAACTCCCCAC--------GAAAAGTCGTCAGGGTGGAGGAGACAGAAGAGGATGTTAACCAGGCAATCGTAGTCCTGAACAAGGAGTGGGTAGCTCTAATCGAAGCTGCTCGAGAAGTGCTGAACTTCGCTTTCAGTGCCACTCCTGCCAACATTTASizeHit CountTotal NormTotal
No Reads
droTak1
TGCAAGTCTGCAATCCGCACCTCCCCACGAAGGACTGGAGAGTCGTCAAGGTGGAGGAACACGAAGGGGACGTAAACCAGGCGGTCTTGGTCCTAAATAAGGAGTCGGTGGCGCCAATCGAGGATGCTCAAGGAAAGCTGAACTTCGGGTT------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
TGCAGCGCTGCAATCCGCACCTTCCCACCTCGGACTGGCGAGTGGTAAAGGTCGACGAAATGGAGGGACCAATAAACCAGGCTATCCTCATTCTAAACAAGGAGTCCCTAGCTCCCATTGAGGCCGCTCACGGGGAGCTAAACTTCGGGTT------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................CAATAAACCAGGCTATCCTCATTC..................................................................................2411.00101000000000
.....................................................................CAATAAACCAGGCTATCCTCAT....................................................................................2211.00101000000000
......................TCCCACCTCGGACTGGCGAGTGGTA................................................................................................................................2540.25101000000000
.....................TTCCCACCTCGGACTGGCGAGTGG..................................................................................................................................24200.20404000000000
............................................................................................................................CGCTCACGGGGAGCTAAACTTCGGG..........................25200.15303000000000
........................................................................................................TCCCTAGCTCCCATTGAGGCCGCTCA.............................................26200.15303000000000
......................TCCCACCTCGGACTGGCGAGTGG..................................................................................................................................23200.15303000000000
..................................................................................................AAGGAGTCCCTAGCTCCCATTGAGGC...................................................26200.10202000000000
...............................................................................................................CTCCCATTGAGGCCGCTCACGG..........................................22200.10202000000000
..................ACCTTCCCACCTCGGACTGGCGAT.....................................................................................................................................24200.05101000000000
................................................................................................................TCCCATTGAGGCCGCTCACGGG.........................................22200.05101000000000
.................CACCTTCCCACCTCGGACTGG.........................................................................................................................................21200.05101000000000
.............................................................................................TAAACAAGGAGTCCCTAGCTCCCATT........................................................26200.05101000000000
.................................................................................................CAAGGAGTCCCTAGCTCCCATTGAGG....................................................26200.05101000000000
........................................................................................................TCCCTAGCTCCCATTGAGGCCGCTC..............................................25200.05101000000000
.................CACCTTCCCACCTCGGACTGGC........................................................................................................................................22200.05101000000000
...............CGCACCTTCCCACCTCGGACTGGCGAGT....................................................................................................................................28200.05101000000000
..................ACCTTCCCACCTCGGACTGGCGAGT....................................................................................................................................25200.05101000000000
.....................TTCCCACCTCGGACTGGCGAGTG...................................................................................................................................23200.05101000000000
................................................................................................................TCCCATTGAGGCCGCTCACGGGGAGCT....................................27200.05101000000000
........................................................................................................TCCCTAGCTCCCATTGAGGCCGCT...............................................24200.05101000000000
................................................................................................................TCCCATTGAGGCCGCTCACGGGGAGC.....................................26200.05101000000000
.........................................................................................................CCCTAGCTCCCATTGAGGCC..................................................20200.05101000000000
...............................................................................................................CTCCCATTGAGGCCGCTCACGGG.........................................23200.05101000000000

Generated: 05/18/2015 at 02:09 AM