ID:

dps_1919

 Coordinate:

Unknown_group_263:5519-5669 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9

Flybase annnotation

CDS [Dpse\GA23134-cds]; exon [dpse_GLEANR_11665:2]; intron [Dpse\GA23134-in]

No Repeatable elements found

mature
  1. Unknown_group_54:5475-5494 +
  2. Unknown_group_108:19812-19831 +
  3. XL_group1e:313902-313921 +
  4. Unknown_group_306:9954-9973 +
  5. Unknown_singleton_513:4505-4524 +
  6. Unknown_group_431:1196-1215 -
  7. Unknown_group_137:555-574 -
  8. Unknown_group_44:3451-3470 +
  9. Unknown_group_141:7649-7668 +
  10. Unknown_singleton_3805:3872-3891 -
  11. Unknown_group_45:14012-14031 -
  12. dps_1919  Unknown_group_263:5634-5653 +
  13. XL_group1a:2858031-2858050 +
  14. Unknown_group_55:5142-5161 +
  15. Unknown_singleton_3856:1103-1122 +
  16. Unknown_singleton_2868:1176-1195 +
  17. Unknown_singleton_2642:2236-2255 +
  18. Unknown_singleton_2297:968-987 +
  19. Unknown_singleton_1755:1092-1111 +
  20. Unknown_group_145:3128-3147 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCCAAGGCCCCCAACAAGCGGTTACGCTCAGCAGAGGACCCCGCTAATCAGCGAGGCCAAGCCCAGCAAGCCAAGCGGGTGAAG
**************************************************.....................................................................................................................((...............(((....)))...))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 GSM343916
embryo
 V112
male body
................................................................................................................................................................................................................................CAAGCCCAGCAAGCCAAGCGG...... 21 0 20 0.30 6 4 2 0 0 0
................................................................................................................................................................................................................................CAAGCCCAGCAAGCCAAGCGGT..... 22 1 20 0.25 5 2 3 0 0 0
...............................................................................................................................................................................................................CCGCTAATCAGCGAGGCCAAGCC..................... 23 0 4 0.25 1 1 0 0 0 0
...............................................................................................................................................................................................................CCGCTAATCAGCGAGGCCAAGC...................... 22 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................................................................................................TAATCAGCGAGGCCAGGCCC.................... 20 1 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................................................................................AAGCCCAGCAAGCCAAGCGG...... 20 0 20 0.20 4 3 1 0 0 0
.................................................................................................................................................................................................................................AAGCCCAGCAAGCCAAGCGGG..... 21 0 20 0.15 3 3 0 0 0 0
.....................................................................................................................................................................CAGCCAAGGCCCCCAACAAG.................................................................. 20 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................................................CAAGCCCAGCAAGCCAAGCG....... 20 0 20 0.10 2 2 0 0 0 0
....................................................................................................................................................................................................................................CCCAGCAAGCCAAGCGGGTGA.. 21 0 20 0.10 2 1 0 0 1 0
.....................................................................................................................................................................................................................................CCAGCAAGCCAAGCGGGTGAA. 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................................GCCAAGCCCAGCAAGCCAAGCGG...... 23 0 20 0.05 1 0 0 1 0 0
....................................................................................................................................................................................................................................CCCAGCAAGCCAAGCGGGTG... 20 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................AGGCCAAGCCCAGCAAGCCAA.......... 21 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................GCCAAGGCCCCCAACAAGCGT............................................................... 21 1 20 0.05 1 0 0 0 0 1
.....................................................................................................................................................................................................................................CCAGCAAGCCAAGCGGGTGA.. 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................AAGCCCAGCAAGCCAAGCGGGT.... 22 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................TAAGGCCCCCAACAAGCGG............................................................... 19 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................AGGCCAAGCCCAGCAAGCCAAG......... 22 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................AAGCCCAGCAAGCCAAGCGGTT.... 22 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................................CCCAGCAAGCCAAGCGGGT.... 19 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGGTTCCGGGGGTTGTTCGCCAATGCGAGTCGTCTCCTGGGGCGATTAGTCGCTCCGGTTCGGGTCGTTCGGTTCGCCCACTTC
**************************************************.....................................................................................................................((...............(((....)))...))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 SRR902010
ovaries
 M059
embryo
................................................................................................................................................................................................................................GTTCGGGTCGTTCGGTTCGCCCACT.. 25 0 20 0.65 13 13 0 0 0
.....................................................................................................................................................................................................CGTCTCCTGGGGCGATTAGT.................................. 20 0 2 0.50 1 1 0 0 0
......................................................................................................................................................................................................GTCTCCTGGGGCGATTAGT.................................. 19 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................................................................GGGCGATTAGTCGCTCCGGTTCGGG.................... 25 0 4 0.50 2 2 0 0 0
..................................................................................................................................................................................................................................TCGGGTCGTTCGGTTCGCCCACT.. 23 0 20 0.45 9 9 0 0 0
..................................................................................................................................................................................................................................TCGGGTCGTTCGGTTCGCCCACTT. 24 0 20 0.45 9 9 0 0 0
....................................................................................................................................................................................................................................GGGTCGTTCGGTTCGCCCACT.. 21 0 20 0.35 7 7 0 0 0
................................................................................................................................................................................................................................GTTCGGGTCGTTCGGTTCGCCCACTT. 26 0 20 0.35 7 7 0 0 0
...............................................................................................................................................................................................................GGCGATTAGTCGCTCCGGTTCGGGT................... 25 0 4 0.25 1 1 0 0 0
......................................................................................................................................................................................................................................GTCGTTCGGTTCGCCCACTTC 21 0 20 0.25 5 5 0 0 0
...............................................................................................................................................................................................................GGCGATTAGTCGCTCCGGTT........................ 20 0 4 0.25 1 1 0 0 0
............................................................................................................................................................................................................................TCCGGTTCGGGTCGTTCGGT........... 20 0 20 0.25 5 5 0 0 0
...............................................................................................................................................................................................................................GGTTCGGGTCGTTCGGTTCGCCCACTT. 27 0 20 0.25 5 5 0 0 0
.....................................................................................................................................................................TTCGGTTCCGGGGGTTGTTC.................................................................. 20 1 20 0.25 5 5 0 0 0
..............................................................................................................................................................................................................GGGCGATTAGTCGCTCCGGTTCGGGT................... 26 0 4 0.25 1 1 0 0 0
.....................................................................................................................................................................GTCGGTTCCGGGGGTTGTT................................................................... 19 0 20 0.25 5 5 0 0 0
.................................................................................................................................................................................................................................TTCGGGTCGTTCGGTTCGCCCACT.. 24 0 20 0.20 4 3 0 0 1
...................................................................................................................................................................................................................................CGGGTCGTTCGGTTCGCCCAC... 21 0 20 0.20 4 4 0 0 0
...............................................................................................................................................................................................................................GGTTCGGGTCGTTCGGTTCGCCCACT.. 26 0 20 0.20 4 4 0 0 0
.......................................................................................................................................................................CGGTTCCGGGGGTTGTT................................................................... 17 0 20 0.20 4 0 0 4 0
..................................................................................................................................................................................................................................TCGGGTCGTTCGGTTCGCCC..... 20 0 20 0.15 3 3 0 0 0
.................................................................................................................................................................................................................................TTCGGGTCGTTCGGTTCGCCCACTT. 25 0 20 0.15 3 3 0 0 0
.....................................................................................................................................................................................................................................TGTCGTTCGGTTCGCCCACTT. 21 1 20 0.10 2 1 0 0 1
................................................................................................................................................................................................................................GTTCGGGTCGTTCGGTTCGCC...... 21 0 20 0.10 2 2 0 0 0
....................................................................................................................................................................................................................................GGGTCGTTCGGTTCGCCCACTT. 22 0 20 0.10 2 2 0 0 0
.....................................................................................................................................................................GTCGGTTCCGGGGGTTGTTCGC................................................................ 22 0 20 0.10 2 2 0 0 0
.....................................................................................................................................................................................................................................GGTCGTTCGGTTCGCCCACTTC 22 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................................................................................CGGGTCGTTCGGTTCGCCCA.... 20 0 20 0.10 2 2 0 0 0
....................................................................................................................................................................................................................................GGGTCGTTCGGTTCGCCCACTTC 23 0 20 0.10 2 2 0 0 0
............................................................................................................................................................................................AAAGCGAGTCGCCTCCTGGGGCGT....................................... 24 3 12 0.08 1 0 1 0 0
......................................................................................................................................................................................................ATCTCCTGGGGCGTTTAGT.................................. 19 2 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................TTCTCCTGGGGCGTTTAGT.................................. 19 2 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................TTCTCCTGGGGCGTTTAG................................... 18 2 17 0.06 1 1 0 0 0
.............................................................................................................................................................................................................................CCGGTTCGGGTCGTTCGGTTCGCCCACT.. 28 0 18 0.06 1 1 0 0 0
..............................................................................................................................................................................................................................CGGTTCGGGTCGTTCGGTTCGCCCACT.. 27 0 19 0.05 1 1 0 0 0
..................................................................................................................................................................................................................................TCGGGTCGTTCGGTTCGCCCACTTC 25 0 19 0.05 1 1 0 0 0
...................................................................................................................................................................................................................................CGGGTCGTTCGGTTCGCCCACTTC 24 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................CCGGTTCGGGTCGTTCGG............ 18 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................CGGTTCGGGTCGTTCGGTTCG........ 21 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................CGGTTCGGGTCGTTCGGTTCGTCCACTT. 28 1 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................CCGGTTCGGGTCGTCCGGT........... 19 1 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................................AGTCGTTCGGTTCGCCCAC... 19 1 20 0.05 1 0 1 0 0
...............................................................................................................................................................................................................................GGTTCGGGTCGTTCAGTTCGCCCACTT. 27 1 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................ACGGTTCGGGTCGTTCGGTTCGCC...... 24 1 20 0.05 1 1 0 0 0
......................................................................................................................................................................TCGGTTCCGGGGGTTGTTCG................................................................. 20 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................TTGGTTCCGGGGGTTGTTCG................................................................. 20 1 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................CGGTTCGGGTCGTTCGGT........... 18 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................................GTCGTTCGGTTCGCCCACT.. 19 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................GGTTCGGGTCGTTCGGTTCGCCCAC... 25 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................................GGTCGTTCGGTTCGCCCACTT. 21 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................................................................................CGGGTCGTTCGGTTCGTCCACTT. 23 1 20 0.05 1 1 0 0 0
.......................................................................................................................................................................TGGTTCCGGGGGTTGTTCGC................................................................ 20 1 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................................TCGGGTCGTTCGGTTCGCC...... 19 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................GGATTGTTCGCCATTGCGAGT...................................................... 21 2 20 0.05 1 0 1 0 0
................................................................................................................................................................................................................................TTTCGGGTCGTTCGGTTCGCCCACT.. 25 1 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................................GTTCGGGTCGTTCGGTTCGCCCA.... 23 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................................CCTCCGGTTCGGGTCGTG............... 18 2 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................GGGTCGGGTCGTGCGGTT.......... 18 2 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................CCGGTTCGGGTCGTTCGGTTCGCCCA.... 26 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................TGTTCGGGTCGTTCGGTTCGC....... 21 1 20 0.05 1 1 0 0 0
.......................................................................................................................................................................CGGTTCCGGGGGTTGTTC.................................................................. 18 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................TTTGGTTCCGGGGGTTGTTCG................................................................. 21 2 20 0.05 1 1 0 0 0
.........................................................................................................................................................................GTTCCGGGGGTTGTTCGCC............................................................... 19 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_263:5469-5719 + dps_1919 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCCA-----AGGC--C---CC--CAACAAGCGGTTACGCTCA----------GCAGAGGA-CCCCGCTAATCAGCGAGGC----------------------CAAGCCCAGCAAGC---------CAAGCGGGTGAAG
droPer2 scaffold_43:311296-311381 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-----AGGC--C---CC--CAACAAGCGGCAACGCTCA----------GCAGAGGA-CCCCGCTAATCAGCGAGGC----------------------CAAGCCCAGCAAGC---------CAAGCGGGTGAAG
droMoj3 scaffold_6500:17456890-17456909 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---------------------------------------------------------------------------------------------------------------ATGC---------CAAGCTGCCGCCA
droGri2 scaffold_15305:114473-114537 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----------------------------AGGCAACGCTCACAAGAGGCACATG----G-ACCCGTTACAAAACGGGCC----------------------AAGGTGCAGC-------------------AGGGAAG
droAna3 scaffold_12905:285628-285711 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG--A-----AGCT--C---CC--CACTAAGGGACAACGTCTG----------GAAGCAAG-CTGCGCCGGT-------------------GTAGGG------GGATGCCAAGGCAC-CAACCCCCAAAACG-----GG
droBip1 scf7180000395751:276132-276203 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCCC-----AGCCAGCCTTCGGGCAGCAAACGAAAGGAGCGA----------GTGGAGG------------------GT----------------------------CCAACGACTTC-------CAAGCGGTCCAGG
droEle1 scf7180000490464:12262-12351 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-----GACC--CCTGTTGGTAATAAACGGTAGCGGTCG----------ATGGAGG------------------TGGCACAACCAGCCAGCAAAAAGGCCAGAATCACCAA---------------CCGAGGAAC
droRho1 scf7180000760371:2407-2481 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACAAGAAGGT--G---CTCAGGCGAAGAGGCAACGCTCC----------ATAGA------------------GCTGCC-CGGCCCGTCGG----------------------C---------GAAGAGATCGAAG
droBia1 scf7180000301187:25779-25815 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAA------GGC-----------------------------------------------------------------AGCACACCCAGCGAG--------------------------------TAAGAAGGCCAAG
droTak1 scf7180000410454:8853-8930 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-----AGGC--C------------AGCGG-ACCACGCA----------GCCAAGTAGCCCCAACGAACCGCAAGGG----------------------CCAATCCAAAACAC---------CCA-CCAGTGCTG
droYak3 v2_chr2L_random_028:794056-794103 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTC--------------------------------------G----------GCAAGGAA-GCCCCCAAGCCAT-------------------------------------------CCAAGCCCATAGAGGTCAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCCA-----AGGC--C---CC--CAACAAGCGGTTACGCTCA----------GCAGAGGA-CCCCGCTAATCAGCGAGGC----------------------CAAGCCCAGCAAGC---------CAAGCGGGTGAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................CAAGCCCAGCAAGC---------CAAGCGG......21200.3060400000020
.............................................................................................................................................................................................................................................................................CAAGCCCAGCAAGC---------CAAGCGGT.....22200.2550200000030
......................................................................................................................................................................................................................................CCGCTAATCAGCGAGGC----------------------CAAGCC..............................2340.2510100000000
......................................................................................................................................................................................................................................CCGCTAATCAGCGAGGC----------------------CAAGC...............................2240.2510100000000
..............................................................................................................................................................................................................................................................................AAGCCCAGCAAGC---------CAAGCGG......20200.2040300000010
..............................................................................................................................................................................................................................................................................AAGCCCAGCAAGC---------CAAGCGGG.....21200.1530300000000
.....................................................................................................................................................................CAGCCA-----AGGC--C---CC--CAACAAG............................................................................................................20200.1020200000000
.............................................................................................................................................................................................................................................................................CAAGCCCAGCAAGC---------CAAGCG.......20200.1020200000000
.................................................................................................................................................................................................................................................................................CCCAGCAAGC---------CAAGCGGGTGA..21200.1020100100000
..................................................................................................................................................................................................................................................................................CCAGCAAGC---------CAAGCGGGTGAA.21200.0510100000000
.....................................................................................................................................................................................................................................................GC----------------------CAAGCCCAGCAAGC---------CAAGCGG......23200.0510000000100
.................................................................................................................................................................................................................................................................................CCCAGCAAGC---------CAAGCGGGTG...20200.0510100000000
...................................................................................................................................................................................................................................................AGGC----------------------CAAGCCCAGCAAGC---------CAA..........21200.0510100000000
.......................................................................................................................................................................GCCA-----AGGC--C---CC--CAACAAGCGT.........................................................................................................21200.0510000001000
..................................................................................................................................................................................................................................................................................CCAGCAAGC---------CAAGCGGGTGA..20200.0510100000000
..............................................................................................................................................................................................................................................................................AAGCCCAGCAAGC---------CAAGCGGGT....22200.0510100000000
...................................................................................................................................................................................................................................................AGGC----------------------CAAGCCCAGCAAGC---------CAAG.........22200.0510100000000
.................................................................................................................................................................................................................................................................................CCCAGCAAGC---------CAAGCGGGT....19200.0510100000000
droPer2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-----AGGC--C---CC--CAACAAGCGGCAACGCTCA----------GCAGAGGA-CCCCGCTAATCAGCGAGGC----------------------CAAGCCCAGCAAGC---------CAAGCGGGTGAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................C--C---CC--CAACAAGCGGCAACGC...................................................................................................20200.051100000
.........................................................................................................................................................................CA-----AGGC--C---CC--CAACAAGCGGCAACGA...................................................................................................25200.051000001
..........................................................................................................................................................................................CC--CAACAAGCGGCAACGCTCA----------G.....................................................................................22200.051010000
...................................................................................................................................................................................................................................................AGGC----------------------CAAGCCCAGCAAGC---------CAAGCG.......24200.051010000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---------------------------------------------------------------------------------------------------------------ATGC---------CAAGCTGCCGCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----------------------------AGGCAACGCTCACAAGAGGCACATG----G-ACCCGTTACAAAACGGGCC----------------------AAGGTGCAGC-------------------AGGGAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG--A-----AGCT--C---CC--CACTAAGGGACAACGTCTG----------GAAGCAAG-CTGCGCCGGT-------------------GTAGGG------GGATGCCAAGGCAC-CAACCCCCAAAACG-----GGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGCGCC......................................................................23135.00352330000
.................................................................................................................................................................................................TAAGGGACAACGTCTG----------GAAGCAAG-C............................................................................25113.00131111000
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGCGC.......................................................................22110.0010460000
..............................................................................................................................................................................................CACTAAGGGACAACGTCTG----------GAAGCAAG-C............................................................................2819.009360000
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGCGCCGG....................................................................2517.007601000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAACC................2417.007160000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAACCC...............2516.006060000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAAC.................2315.005050000
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGCGCCG.....................................................................2414.004220000
...................................................................................................................................................................................T--C---CC--CACTAAGGGACAACGTCTG----------GAAG..................................................................................2714.004040000
...................................................................................................................................................................................T--C---CC--CACTAAGGGACAACGTCTG----------GAAGC.................................................................................2813.003030000
..........................................................................................................................................................................................................ACGTCTG----------GAAGCAAG-CTGCGCCGG....................................................................2413.003300000
...................................................................................................................................................................................................................................................................AGGG------GGATGCCAAGGCAC-CAAC.................2213.003030000
.............................................................................................................................................................................................................................................T-------------------GTAGGG------GGATGCCAAGGCAC-CA...................2312.002020000
.................................................................................................................................................................................GCT--C---CC--CACTAAGGGACAACGTCTG----------GA....................................................................................2712.002110000
......................................................................................................................................................................................C---CC--CACTAAGGGACAACGTCTG----------GAAGC.................................................................................2712.002110000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAACA................2412.002110000
.................................................................................................................................................................................GCT--C---CC--CACTAAGGGACAACGTCTG----------G.....................................................................................2612.002110000
...................................................................................................................................................................................T--C---CC--CACTAAGGGACAACGTCTG----------GAAGCA................................................................................2912.002020000
..........................................................................................................................................................................................................ACGTCTG----------GAAGCAAG-CTGCGCC......................................................................2212.002020000
..........................................................................................................................................................................................CC--CACTAAGGGACAACGTCTG----------GAAGC.................................................................................2612.002020000
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGCGCCGGT-------------------G...............................................2712.002200000
...................................................................................................................................................................................T--C---CC--CACTAAGGGACAACGTCTG----------G.....................................................................................2412.002110000
.............................................................................................................................................................................................................................................T-------------------GTAGGG------GGATGCCAAGGCAC-.....................2112.002110000
.............................................................................................................................................................................................................................................T-------------------GTAGGG------GGATGCCAAGGCAC-C....................2212.002020000
...............................................................................................................................................................................................................TG----------GAAGCAAG-CTGCGCCGGT-------------------GTAGG...........................................2512.002110000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAA..................2212.002020000
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGCG........................................................................2112.002110000
.....................................................................................................................................................................................................................................TGCGCCGGT-------------------GTAGGG------GGATGCCAAG..........................2511.001100000
........................................................................................................................................................................................................CAACGTCTG----------GAAGCAAG-CTGCGCC......................................................................2411.001010000
.............................................................................................................................................................................................................................................T-------------------GTAGGG------GGATGCCAAGGCAC-CAAC.................2511.001010000
.........................................................................................................................................................................................................AACGTCTG----------GAAGCAAG-CTGC.........................................................................2011.001001000
...........................................................................................................................................................................................C--CACTAAGGGACAACGTCTG----------GAAGCAAG-.............................................................................2811.001010000
..............................................................................................................................................................................................CACTAAGGGACAACGTCTG----------GAAGC.................................................................................2411.001010000
..................................................................................................................................................................................CT--C---CC--CACTAAGGGACAACGTCTG----------G.....................................................................................2511.001010000
...................................................................................................................................................................................................................................................................AGGG------GGATGCCAAGGCAC-CAACC................2311.001010000
...........................................................................................................................................................................................................................GAAGCAAG-CTGCGCCGGT-------------------GTAGG...........................................2311.001100000
.....................................................................................................................................................................................................................................TGCGCCGGT-------------------GTAGGG------GGATGCCAAGG.........................2611.001001000
..........................................................................................................................................................................................................ACGTCTG----------GAAGCAAG-CTGCGCCGGT-------------------................................................2511.001100000
.....................................................................................................................................................................................................................................TGCGCCGGT-------------------GTAGGG------GGATGCC.............................2211.001010000
..................................................................................................................................................................................................................................G-CTGCGCCGGT-------------------GTAGGG------GGATGCCA............................2511.001100000
.................................................................................................................................................................................................................................AG-CTGCGCCGGT-------------------GTAGGG------GGATG...............................2311.001001000
......................................................................................................................................................................................C---CC--CACTAAGGGACAACGTCTG----------GAAG..................................................................................2611.001010000
.....................................................................................................................................................................................................................................TGCGCCGGT-------------------GTAGGG------GGATGCCT............................2311.001010000
......................................................................................................................................................................................................GACAACGTCTG----------GAAGCAAG-CTGCGCC......................................................................2611.001010000
...............................................................................................................................................................................................................TG----------GAAGCAAG-CTGCGCCGGT-------------------GTAG............................................2411.001100000
..........................................................................................................................................................................................................ACGTCTG----------GAAGCAAG-CTGCGC.......................................................................2111.001100000
.............................................................................................................................................................................................................................................T-------------------GTAGGG------GGATGCCAAGGCAC-CAACCCC..............2811.001010000
.................................................................................................................................................................................................TAAGGGACAACGTCTG----------GAAGCAAC-.............................................................................2411.001010000
.............................................................................................................................................................................................................TCTG----------GAAGCAAG-CTGCGCCGGT-------------------GTA.............................................2511.001100000
.............................................................................................................................................................................................................................................T-------------------GTAGGG------GGATGCCAAGGCAC-CAA..................2411.001010000
...................................................................................................................................................................................................AGGGACAACGTCTG----------GAAGCAAG-CTGC.........................................................................2611.001010000
...................................................................................................................................................................................................AGGGACAACGTCTG----------GAAGCAAG-CT...........................................................................2411.001100000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAACCCC..............2611.001010000
...................................................................................................................................................................................T--C---CC--CACTAAGGGACAACGTCTG----------GA....................................................................................2511.001001000
............................................................................................................................................................................................................................AAGCAAG-CTGCGCCGGT-------------------GTAGGG------GG..................................2511.001001000
......................................................................................................................................................................................................................................GCGCCGGT-------------------GTAGGG------GGATG...............................1911.001100000
..................................................................................................................................................................................................................................................................TAGGG------GGATGCCAAGGCAC-CAACCT...............2511.001010000
.................................................................................................................................................................................................TAAGGGACAACGTCTG----------GAAGCAAG-.............................................................................2411.001010000
...............................................................................................................................................................................................ACTAAGGGACAACGTCTG----------GAAGCAAG-C............................................................................2711.001010000
......................................................................................................................................................................................................................................GCGCCGGT-------------------GTAGGG------GGATGCCAAG..........................2411.001100000
.................................................................................................................................................................................................................................................................GTAGGG------GGATGCCAAGGCAC-CA...................2211.001010000
...............................................................................................................................................................................................................................CAAG-CTGCGCCGGT-------------------GTAGGG------GG..................................2220.501100000
.....................................................................................................................................................................GCG--A-----AGCT--C---CC--CACTAAGGGAC........................................................................................................2260.332000002
...................................................................................................................................................................................T--C---CC--CACTAAGGGACAACGTC..................................................................................................2140.251010000
................................................................................................................................................................................................................................................................................TGCCAAGGCAC-CAACCCCCAAAACG-----G.26180.173120000
.....................................................................................................................................................................................................................................................................GG------GGATGCCAAGGCAC-CAACCC...............2270.141010000
..............................................................................................................................................................................................................................................................................GATGCCAAGGCAC-CAACCCCC.............21170.122200000
..............................................................................................................................................................................................................................................................................GATGCCAAGGCAC-CAACCCCCAAA..........24170.061100000
....................................................................................................................................................................................................................................................................................AAGGCAC-CAACCCCCAAAACG-----G.22200.051010000
droBip1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCCC-----AGCCAGCCTTCGGGCAGCAAACGAAAGGAGCGA----------GTGGAGG------------------GT----------------------------CCAACGACTTC-------CAAGCGGTCCAGGSizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-----GACC--CCTGTTGGTAATAAACGGTAGCGGTCG----------ATGGAGG------------------TGGCACAACCAGCCAGCAAAAAGGCCAGAATCACCAA---------------CCGAGGAACSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACAAGAAGGT--G---CTCAGGCGAAGAGGCAACGCTCC----------ATAGA------------------GCTGCC-CGGCCCGTCGG----------------------C---------GAAGAGATCGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAA------GGC-----------------------------------------------------------------AGCACACCCAGCGAG--------------------------------TAAGAAGGCCAAGSizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-----AGGC--C------------AGCGG-ACCACGCA----------GCCAAGTAGCCCCAACGAACCGCAAGGG----------------------CCAATCCAAAACAC---------CCA-CCAGTGCTGSizeHit CountTotal NormTotal
No Reads
droYak3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTC--------------------------------------G----------GCAAGGAA-GCCCCCAAGCCAT-------------------------------------------CCAAGCCCATAGAGGTCAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/18/2015 at 02:09 AM