ID:

dps_1911

 Coordinate:

Unknown_group_26:31078-31185 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.6 -24.3 -24.3

Flybase annnotation

CDS [Dpse\GA29281-cds]; exon [dpse_GLEANR_9876:2]; exon [dpse_GLEANR_9876:3]; CDS [Dpse\GA29281-cds]; intron [Dpse\GA29281-in]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------##################################################
ACGGAGCGGACATAGCCCTAGTCCAGGAACCTTGGATAGTGGAAGACAAGGTTTGTGGACTAGGGTCGAGGGAGTACAAGATGATTGTAGCTCCTAATGAAGGTAAAAAGCATTCTTGCCAGAAAGCACCTAAATATCTTTCTTCTCCATAATTATAGCAAAGCGACAACACGGCGGCAAGCCTAGAGCTGAAAGGTACACATCTAAG
**************************************************..(((((((..(((((((.((((((((((.....)))).))))))..)))((((.....((.((((....)))).))))))........))))..)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 M022
male body		 GSM444067
head
..............................................CAAGGTTTGTGGACTAGGGTC............................................................................................................................................. 21 0 19 3.42 65 61 2 2 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGGGT.............................................................................................................................................. 21 0 19 2.21 42 33 4 4 1 0 0 0
................................................AGGTTTGTGGACTAGGGTCG............................................................................................................................................ 20 0 19 2.00 38 32 2 4 0 0 0 0
.......................CAGGAACCTTGGATAGTGGAAGAC................................................................................................................................................................. 24 0 4 1.50 6 0 6 0 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGGG............................................................................................................................................... 20 0 20 1.30 26 20 1 4 1 0 0 0
................................................AGGTTTGTGGACTAGGGTC............................................................................................................................................. 19 0 20 1.30 26 15 1 7 0 0 2 1
...............................................AAGGTTTGTGGACTAGGGTC............................................................................................................................................. 20 0 19 1.05 20 14 0 5 1 0 0 0
..................................................GTTTGTGGACTAGGGTCGAGG......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................TCCAGGAACCTTGGATAGTGGAAGACAA............................................................................................................................................................... 28 0 3 1.00 3 0 3 0 0 0 0 0
.......................................................TGGACTAGGGTCGGGGGAG...................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................TCTTGCCACAGAGCACCTAAATATC...................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
........................................................GGACTAGGGTCGAGGGAGTA.................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.......GGACATAGCCCTCGTCCAGA..................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0
...............................................AAGGTTTGTGGACTAGGGTCG............................................................................................................................................ 21 0 18 1.00 18 14 1 2 1 0 0 0
.....................................................................................................GGTGAAACGCATTCTTGTCA....................................................................................... 20 3 9 0.89 8 8 0 0 0 0 0 0
...........................................AGACAAGGTTTGTGGACTAGG................................................................................................................................................ 21 0 18 0.89 16 10 4 1 1 0 0 0
.....................TCCAGGAACCTTGGATAGTGG...................................................................................................................................................................... 21 0 20 0.80 16 16 0 0 0 0 0 0
......................CCAGGAACCTTGGATAGTGG...................................................................................................................................................................... 20 0 20 0.80 16 12 0 2 2 0 0 0
........................AGGAACCTTGGATAGTGGAAGAC................................................................................................................................................................. 23 0 4 0.75 3 0 3 0 0 0 0 0
.....................................................................................................................................................................ACAACACGGCGGCAAGCCTAG...................... 21 0 20 0.70 14 14 0 0 0 0 0 0
............................ACCTTGGATAGTGGAAGACAAG.............................................................................................................................................................. 22 0 3 0.67 2 2 0 0 0 0 0 0
....................................................................................................................................................................GACAACACGGCGGCAAGCCTA....................... 21 0 20 0.65 13 12 0 1 0 0 0 0
.....................TCCAGGAACCTTGGATAGTGGAAGAC................................................................................................................................................................. 26 0 4 0.50 2 0 2 0 0 0 0 0
...................................................................................................ACGGTAAAACGCATTCTTGTC........................................................................................ 21 3 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................CAACACGGCGGCAAGCCTAGA..................... 21 0 20 0.50 10 10 0 0 0 0 0 0
..............................................CAAGGTTTGTGGACTAGGGT.............................................................................................................................................. 20 0 19 0.42 8 4 0 0 4 0 0 0
..............................................CAAGGTTTGTGGACTAGGG............................................................................................................................................... 19 0 20 0.40 8 5 0 1 2 0 0 0
........................AGGAACCTTGGATAGTGGAAGACAAG.............................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
.......................CAGGAACCTTGGATAGTGGAAGACA................................................................................................................................................................ 25 0 3 0.33 1 0 0 0 1 0 0 0
..................................................GTTTGTGGACTAGGGTCGA........................................................................................................................................... 19 0 20 0.30 6 6 0 0 0 0 0 0
...................................................................................................................................................................CGACAACACGGCGGCAAGCC......................... 20 0 20 0.30 6 6 0 0 0 0 0 0
........................................................................................................................................................................ACACGGCGGCAAGCCTAGAGC................... 21 0 20 0.30 6 6 0 0 0 0 0 0
...................................................................................................................................................................CGACAACACGGCGGCAAGCCT........................ 21 0 20 0.25 5 5 0 0 0 0 0 0
............................................GACAAGGTTTGTGGACTAGG................................................................................................................................................ 20 0 19 0.21 4 3 0 1 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGG................................................................................................................................................ 19 0 20 0.20 4 4 0 0 0 0 0 0
.........................................................................................................................................................................CACGGCGGCAAGCCTAGAGCT.................. 21 0 20 0.20 4 4 0 0 0 0 0 0
....................................................................................................................................................................GACAACACGGCGGCAAGCC......................... 19 0 20 0.20 4 4 0 0 0 0 0 0
...............................................AAGGTTTGTGGACTAGGGTCGA........................................................................................................................................... 22 0 18 0.17 3 0 3 0 0 0 0 0
..............................................CAAGGTTTGTGGACTAGGGTCG............................................................................................................................................ 22 0 18 0.17 3 2 0 1 0 0 0 0
................................................AGGTTTGTGGACTAGGGTCGT........................................................................................................................................... 21 1 19 0.16 3 3 0 0 0 0 0 0
...........................................................................................................................................................................CGGCGGCAAGCCTAGAGCTG................. 20 0 20 0.15 3 3 0 0 0 0 0 0
.................................................................................................................................................................AGCGACAACACGGCGGCAAG........................... 20 0 20 0.15 3 2 0 0 1 0 0 0
.........................................................................................................................................................................CACGGCGGCAAGCCTAGAGC................... 20 0 20 0.15 3 2 0 0 0 0 1 0
.................................GGTTAGTGGAAGACAAGTAT........................................................................................................................................................... 20 3 8 0.13 1 0 0 1 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGGGTCG............................................................................................................................................ 23 0 18 0.11 2 2 0 0 0 0 0 0
.................................................GGTTTGTGGACTAGGGTCG............................................................................................................................................ 19 0 19 0.11 2 2 0 0 0 0 0 0
................................................AGGTTTGTGGACTAGGGTCGA........................................................................................................................................... 21 0 19 0.11 2 2 0 0 0 0 0 0
.................................................................................................................................................................AGCGACAACACGGCGGCAAGC.......................... 21 0 20 0.10 2 2 0 0 0 0 0 0
................................................GGGTTTGTGGACTGGGGTC............................................................................................................................................. 19 2 20 0.10 2 0 0 2 0 0 0 0
....................................................................................................................................................................GACAACACGGCGGCAAGCCTAG...................... 22 0 20 0.10 2 2 0 0 0 0 0 0
.....................................................................................................................................................................ACAACACGGCGGCAAGCCTA....................... 20 0 20 0.10 2 2 0 0 0 0 0 0
...................................................TTTGTGGACTAGGGTCGA........................................................................................................................................... 18 0 20 0.10 2 1 0 0 0 1 0 0
.................................................................................................................................................................AGCGACAACACGGCGGCAAGT.......................... 21 1 20 0.10 2 2 0 0 0 0 0 0
.................................................................................................................................................................AGCGACAACACGGCGGCAAGCC......................... 22 0 20 0.10 2 2 0 0 0 0 0 0
.................................................GGTTTGTGGACTAGGGTC............................................................................................................................................. 18 0 20 0.10 2 2 0 0 0 0 0 0
................................................GGGTTTGTGGACTGGGGTCG............................................................................................................................................ 20 2 20 0.10 2 1 0 1 0 0 0 0
...........................................................................................................................................................................CGGCGGCAAGCCTAGAGCTGAA............... 22 0 20 0.10 2 2 0 0 0 0 0 0
..........................................................................................................................................................................ACGGCGGCAAGCCTAGAGCTG................. 21 0 20 0.10 2 2 0 0 0 0 0 0
...........................................................................................................................................................................CGGCGGCAAGCCTAGAGCTGA................ 21 0 20 0.10 2 2 0 0 0 0 0 0
.................................................................................................................................................................................CAAGCCTAGAGCTGAAAGG............ 19 0 20 0.10 2 2 0 0 0 0 0 0
................................................AGGTTTGTGGACTAGGGTCT............................................................................................................................................ 20 1 20 0.10 2 2 0 0 0 0 0 0
................................................................................ATAATTTTAGCTCCTAACGA............................................................................................................ 20 3 11 0.09 1 0 0 0 0 1 0 0
......................................................................................GTAGCACCCAATGAACGTA....................................................................................................... 19 3 13 0.08 1 1 0 0 0 0 0 0
...........................................AGACAAGGTTTGTGGACTAGGGT.............................................................................................................................................. 23 0 18 0.06 1 1 0 0 0 0 0 0
...........................................AGACAAGGTTTGTGGACTAGGG............................................................................................................................................... 22 0 18 0.06 1 1 0 0 0 0 0 0
...............................................AAGGTTTGCGGACTAGGGTCG............................................................................................................................................ 21 1 18 0.06 1 0 0 1 0 0 0 0
...............................................AAGGTTTGTGGACTAGGGTCGT........................................................................................................................................... 22 1 18 0.06 1 0 0 1 0 0 0 0
...........................................AGACAAGGTTTGTGGACTAGGGTC............................................................................................................................................. 24 0 18 0.06 1 1 0 0 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGGGTT............................................................................................................................................. 22 1 19 0.05 1 1 0 0 0 0 0 0
.............................................ACAGGGTTTGTGGACTAGGGT.............................................................................................................................................. 21 1 19 0.05 1 1 0 0 0 0 0 0
.............................................ACAAGGTTTGTGGGCTAGGGT.............................................................................................................................................. 21 1 19 0.05 1 1 0 0 0 0 0 0
..............................................CAGGGTTTGTGGACTGGGGT.............................................................................................................................................. 20 2 19 0.05 1 1 0 0 0 0 0 0
..............................................CAAGGTTTGTGGACTAGGGTT............................................................................................................................................. 21 1 19 0.05 1 1 0 0 0 0 0 0
.............................................ACAAGGTTTGTGGTCTAGGGT.............................................................................................................................................. 21 1 19 0.05 1 1 0 0 0 0 0 0
........................................................................AGTACAAGATAATTGTAGCTCTT................................................................................................................. 23 2 19 0.05 1 1 0 0 0 0 0 0
............................................GACAAGGTTTGTGGACTAGGG............................................................................................................................................... 21 0 19 0.05 1 0 0 1 0 0 0 0
............................................GACAAGGTTTATGGACTAGG................................................................................................................................................ 20 1 19 0.05 1 1 0 0 0 0 0 0
.............................................ACAGGGTTTGTGGACTGGGGT.............................................................................................................................................. 21 2 19 0.05 1 1 0 0 0 0 0 0
.............................................ACAGGGTTTGTGGACTAGGG............................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0
...........................................AGACAAGGTTTGTGGACTAG................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0
........................AGGAACCTTGGATAGTGG...................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0 0
......................................................................................................................................................................CAACACGGCGGCAAGCCTA....................... 19 0 20 0.05 1 1 0 0 0 0 0 0
..................................................GTTTGTGGACTGGGGTCGA........................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................CACGGCGGCAAGCCTAGAGCTGAAAG............. 26 0 20 0.05 1 1 0 0 0 0 0 0
................................................GGGTTTGTGGACTAGGGTT............................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0 0
.....................TCCAGGAACCTTGGATAGT........................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................ACACGGCGGCAAGCCTAGAGCT.................. 22 0 20 0.05 1 1 0 0 0 0 0 0
......................................................................................................................................................................CAACACGGCGGCAAGCCTAGAGCTGAA............... 27 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................ACACGGCGGCAAGCCTAGAGT................... 21 1 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................ACACGGCGGCAAGCCTAGAGCTG................. 23 0 20 0.05 1 1 0 0 0 0 0 0
.....................................................................................................................................................................ACAACACGGCGGCAAGCCTAGAGCT.................. 25 0 20 0.05 1 1 0 0 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGGGC.............................................................................................................................................. 21 1 20 0.05 1 0 0 0 1 0 0 0
...................................ATTGGGGAAGATAAGGTTTGTG....................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 1 0 0
..................................................GTTTGTGGACTAGGGTCG............................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0
............................................................................................................................................................................GGCGGCAAGCCTAGAGCTGAA............... 21 0 20 0.05 1 1 0 0 0 0 0 0
............................................................................................................................................................................GGCGGTAAGCCTAGAGCTGAA............... 21 1 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................ACACGGCGGCAAGCCTAGAG.................... 20 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................ACACGGCGGCAAGCCTAGA..................... 19 0 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................CACGGCGGCAAGCCTAGAGCTG................. 22 0 20 0.05 1 0 0 1 0 0 0 0
...............................................AAGGTTTGTGGACTAGGG............................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0
....................................................................................................................................................................GACAACACGGCGGCAAGCCTAGA..................... 23 0 20 0.05 1 1 0 0 0 0 0 0
................................................AGGTTTTTGGACTAGGGTC............................................................................................................................................. 19 1 20 0.05 1 0 0 1 0 0 0 0
................................................................................................................................................................................GCAAGCCTAGAGCTGAAAGG............ 20 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................................CCACAACACGGGGGAAAGC.......................... 19 3 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................................................................................AACACGGCGGCAAGCCTAGAG.................... 21 0 20 0.05 1 1 0 0 0 0 0 0
................................................AGGTTTGTGGACTAGGGT.............................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0
...............................................AAGGTCTGTGGACTAGGGTC............................................................................................................................................. 20 1 20 0.05 1 0 0 1 0 0 0 0
.............................................ACAGGGTTTGTGGACTGGGG............................................................................................................................................... 20 2 20 0.05 1 0 0 0 1 0 0 0
.................................................................................................................................................................................TAAGCCTAGAGCTGGAAGG............ 19 2 20 0.05 1 1 0 0 0 0 0 0
..............................................CAAGGTTTGTGGACTAGG................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................CACGGCGGCAAGCCTAGAGCTTT................ 23 2 20 0.05 1 1 0 0 0 0 0 0
................................................AGGTTTGTGGACTGGGGTCG............................................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................................GCAAGCCTAGAGCTGAAAG............. 19 0 20 0.05 1 1 0 0 0 0 0 0
......................................................................................................................................................................CAACACGGCGGCAAGCCTAGAGCT.................. 24 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................................CGACAACACGGCGGCAAGCCTAG...................... 23 0 20 0.05 1 1 0 0 0 0 0 0
...........................................ATACAAGGTTTGTGGACTAG................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................................................................................................................GGCAAGCCTAGAGCTGAAAGG............ 21 0 20 0.05 1 1 0 0 0 0 0 0
....................................................................................................................................................................GACAACACGGCGGTAAGCCTA....................... 21 1 20 0.05 1 1 0 0 0 0 0 0
.............................................ACAAGGTTTGTGGACTAGT................................................................................................................................................ 19 1 20 0.05 1 0 0 0 0 1 0 0

Anti-sense strand reads

TGCCTCGCCTGTATCGGGATCAGGTCCTTGGAACCTATCACCTTCTGTTCCAAACACCTGATCCCAGCTCCCTCATGTTCTACTAACATCGAGGATTACTTCCATTTTTCGTAAGAACGGTCTTTCGTGGATTTATAGAAAGAAGAGGTATTAATATCGTTTCGCTGTTGTGCCGCCGTTCGGATCTCGACTTTCCATGTGTAGATTC
**************************************************..(((((((..(((((((.((((((((((.....)))).))))))..)))((((.....((.((((....)))).))))))........))))..)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 M022
male body		 M062
head
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
.....................................................................................................CCACTTTGCGTAAGAACAGT....................................................................................... 20 3 9 18.11 163 144 18 0 1 0 0 0 0
..............CGGGATCAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 24 0 3 10.00 30 27 0 2 1 0 0 0 0
...............GGGATCAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 23 0 3 1.67 5 5 0 0 0 0 0 0 0
................GGATCAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 22 0 3 1.33 4 4 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCGTTCGGATCTCGACT................ 24 0 20 1.10 22 22 0 0 0 0 0 0 0
............................................CTGTTCCAAACACCTGATCCCAGCT........................................................................................................................................... 25 0 17 1.06 18 17 0 0 0 0 1 0 0
........................................................................................................................................AGAAAGAAGAGGTATTAATATCGT................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGTTCGGATCTCGACTTTCCATGT........ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................TGATCCCAGCTCCCTCATGTTC................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................TCTACTAACATCGAGGATTACTTCCAT....................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................AGAACGGTCTTTCGTGGATTTAT........................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................TTCGCTGTTGTGCCGCCGTTC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................CGTAAGAACGGTCTTTCGTGGATTT.......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............TCGGGATCAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 25 0 3 0.67 2 1 0 0 0 1 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGATCTCGACTT............... 24 0 20 0.65 13 12 0 1 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCGTTC........................... 20 0 20 0.65 13 11 2 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGATCTCGACT................ 23 0 20 0.65 13 13 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTCG.......................... 21 1 20 0.60 12 11 0 0 1 0 0 0 0
..........................................................................................................................................................................TGCCGCCATTCGGATCTCGAC................. 21 1 20 0.55 11 11 0 0 0 0 0 0 0
.............................................................................................................................................................................CGCCGTTCGGATCTCGACTTT.............. 21 0 20 0.55 11 11 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGCCGTTCGGATCTCGAC................. 21 0 20 0.55 11 11 0 0 0 0 0 0 0
....................................................................................................................ACGGTGTCTCGTGGATTTAT........................................................................ 20 2 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................CCACTTTGCGTAAGAACAGTC...................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CGCCATTCGGATCTCGACCT............... 20 2 20 0.45 9 9 0 0 0 0 0 0 0
.............................................................................................................................................................................CGCCGTTCGGATCTCGACT................ 19 0 20 0.40 8 8 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCATTCGGA........................ 21 1 20 0.35 7 7 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGA.................. 21 1 20 0.35 7 7 0 0 0 0 0 0 0
..............AGGGATCAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0
..................................CTATCACCTTCTGTTCCAAACACCTGA................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................GTCCTTGGAACCTATCACCTTCTGTT............................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
..............CGGGATCAGGTCCTTGGAACCTA........................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................GTCCTTGGGACCTATCACCTTCTGTT............................................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0
..............CGGGATCAGGTCCTTGGAACCTATG......................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
...............GGGATCAGGTCCTTGGAACCTA........................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCCGTTCGGATCTCGACT................ 21 0 20 0.30 6 6 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGATCTCGACTTT.............. 25 0 20 0.30 6 3 1 0 0 0 1 0 1
..................................................................................................................................................................CGCTGTTGTGCCGCCATTCGGAT....................... 23 1 20 0.25 5 4 1 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCGTTCGGATCTCGACTT............... 25 0 20 0.25 5 5 0 0 0 0 0 0 0
....................................................................................................GCCACTTTGCGTAAGAACGG........................................................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CGCCATTCGGATCTCGACCTT.............. 21 2 20 0.25 5 5 0 0 0 0 0 0 0
............................................................................................................................................................................CCGCCATTCGGATCTCGACCT............... 21 2 20 0.25 5 5 0 0 0 0 0 0 0
.....................AGGTCCTTGGAACCTATCACCTTCT.................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................TAGAAAGAAGAGGTATTAATA.................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTCGGAT....................... 24 1 18 0.22 4 2 0 0 0 0 0 2 0
...............................................TTCCAAACACCTGATCCCAGC............................................................................................................................................ 21 0 18 0.22 4 4 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCATTCGGAT....................... 22 1 20 0.20 4 3 0 0 0 0 0 1 0
..................................................................................................................................................................CGCTGTTGTGCCGCCGTTCGG......................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
......................................................................................................................................................................GTTGTGCCGCCGTTCGGATCT..................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCATTCGGATCTCGACCT............... 25 2 20 0.20 4 3 0 0 0 0 0 0 1
....................................................................................................................................................................CTGTTGTGCCGCCGTTCGGAT....................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
.............................................TGTTCCAAACACCTGATCCCAGCT........................................................................................................................................... 24 0 18 0.17 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCATTCGGATCTCGACCTT.............. 20 2 20 0.15 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................GTTGTGCCGCCATTCGGATC...................... 20 1 20 0.15 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCGTTCGGAT....................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCATTCG.......................... 20 1 20 0.15 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCGTTCGGATCTCGACTT............... 19 0 20 0.15 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCATTCGGATCTCGACCTT.............. 26 2 20 0.15 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCATTCGG......................... 20 1 20 0.15 3 3 0 0 0 0 0 0 0
............................................CTGTTCCAAACACCTGATCCCAGC............................................................................................................................................ 24 0 17 0.12 2 2 0 0 0 0 0 0 0
..............................................GTTCCAAACACCTGATCCCAGCT........................................................................................................................................... 23 0 18 0.11 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCGTTCGGAT....................... 24 0 18 0.11 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTCGGATCT..................... 26 1 18 0.11 2 1 1 0 0 0 0 0 0
................................................TCCAAACACCTGATCCCAGCT........................................................................................................................................... 21 0 19 0.11 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCCATTCGGATCTCGACCT............... 22 2 20 0.10 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................CTGTTGTGCCGCCATTCGGAT....................... 21 1 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................TGTCGTGCCGCCGTTCGGAT....................... 20 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCGTTCGGATCT..................... 25 0 20 0.10 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGATCTCG................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCCGTTCGGATCTCGACTT............... 22 0 20 0.10 2 2 0 0 0 0 0 0 0
.....................TGGTCCTTGGAACCTATCACC...................................................................................................................................................................... 21 1 20 0.10 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGCCGTTCGGATCTCGACTT............... 23 0 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCGTTCGGATC...................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTC........................... 20 1 20 0.10 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCATTCGGATCTCGACCTTC............. 27 2 20 0.10 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGTTCGGATCTCGACTTTC............. 20 0 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCGTTCG.......................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................CGCCATTCGGATCTCGACC................ 19 2 20 0.10 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................CCGCCGTTCGGATCTCGACC................ 20 1 20 0.10 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCATTCGGATCTCGACCTTC............. 21 2 20 0.10 2 2 0 0 0 0 0 0 0
.........................................................CTCATCCCAGCTACCTCATGTTCT............................................................................................................................... 24 2 14 0.07 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CGGATCTCGACTTTCCGTGTGTAGATT. 27 1 14 0.07 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................GGATCTCGACCTTCCTTGTGTAGATT. 26 2 14 0.07 1 1 0 0 0 0 0 0 0
............................................CTGTTCCAAATACCTGATCCCAGCT........................................................................................................................................... 25 1 17 0.06 1 1 0 0 0 0 0 0 0
...........................................TCTGTTCCAAACACCTGATCCCAGC............................................................................................................................................ 25 0 17 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTCGGATCTCG................... 28 1 18 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCGTTCGGATC...................... 25 0 18 0.06 1 1 0 0 0 0 0 0 0
...........................................TCTGTTCCAAACACCTGATCCCAG............................................................................................................................................. 24 0 18 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCGTTCGGATCT..................... 26 0 18 0.06 1 1 0 0 0 0 0 0 0
...........................................TCTGTTCCAAACACCTGATCC................................................................................................................................................ 21 0 18 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTCGGATC...................... 25 1 18 0.06 1 1 0 0 0 0 0 0 0
.................................................CCAAACACCTGATCCCAGC............................................................................................................................................ 19 0 19 0.05 1 1 0 0 0 0 0 0 0
...............................................TTTCAAACACCTGATCCCAGC............................................................................................................................................ 21 1 19 0.05 1 1 0 0 0 0 0 0 0
...............................................TTCCAAACACCTGATCCCAG............................................................................................................................................. 20 0 19 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................CGCCGCCGTTCGGATCTCGACTT............... 23 1 20 0.05 1 0 0 0 0 0 1 0 0
..............CGGGACCAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGACTT............... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCGTTCGGATCT..................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGCCGTTCGGATCTCGACTTT.............. 24 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCGTTCGGATCTCGACTTTC............. 27 0 20 0.05 1 1 0 0 0 0 0 0 0
.....GGCCTGTATCGAGATCAGGTCCA.................................................................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 1
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGAC................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCCGCCGTTCGGATCTCGACT................ 23 1 20 0.05 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................AAAGTTGTGCCGCCGTTCGGATCT..................... 24 3 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................GTTGTGCCGCCGTTCGGATC...................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCATTCGGATCTCGACC................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCCGTTCGGATCTCGAC................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCGTTCG.......................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCGTTAGGATCTCGACT................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCGTTCGGATCTCGACTTTC............. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGGTCTCGA.................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCGCCATTCGGATCTCGAC................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCCGCCGTTCGGATCTCGACTT............... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCAGTTCGGATCTCGACTTT.............. 25 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCGT............................. 17 0 20 0.05 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCATTCGGATCTCGAC................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCATTCGG......................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
...........TATCGACATCAGGTCCTT................................................................................................................................................................................... 18 2 20 0.05 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCATTCGGATCT..................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TGCCGTTCGGATCTCGACTTTC............. 22 1 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................GTTGTGCCGCCATTCGGAT....................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0
...................AAAGGTCCTTGGAACCTAT.......................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0
...CGCGCCTGTATCGAGATCAGGTCCT.................................................................................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TGTTGTGCCGCCGTTCGGGTC...................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TTGTGCCGCCATTCGGATCTCGAC................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGTCGTTCGGATCTCGACTT............... 23 1 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TCAGTGCCGCCGTTCGGATCT..................... 21 3 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCCATTCGGATCTCGAC................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCGTTCGGATCTCGAC................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGACTTT.............. 25 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGCCATTCGGATCTCGACCT............... 23 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGACC................ 23 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCGCCGTTCGGATCTCGACTTT.............. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CCGCCGTTCGAATCTCGACTT............... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGATGTCGACTT............... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCGTTCGGATCTCGACCTT.............. 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCCTTCG.......................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGTTGTGCCGCCGTT............................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCCGCCGTTCGGATCTCGAC................. 22 1 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGACCT............... 24 2 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCGTTCT.......................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TGCCATTCGGATCTCGACCTT.............. 21 3 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CGCTGTTGTGCCGCCATTCGGA........................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCGTTCGGGTCTCGACTTTC............. 21 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................TCTGTTCCAAACACCTGATC................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................AGCTGTTGTGCCGCCATTCGGATCT..................... 25 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCGTTCGGATCTCGACTTTC............. 26 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCGTTCGGATC...................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GCTGTTGTGCCGCCATTCGGATC...................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGCCATTCGGATCTCGA.................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCT..................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGCCGCCATTCGGATCTCGACT................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TCTGTTGTGCCGCCATTCGGAT....................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CCGCCGTTCGGATCTCGGCTT............... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCCGCCGTTCGGGTCTCGA.................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGCCGCCATTCGGATCTCG................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_26:31028-31235 + dps_1911 ACGGAGCGGACATAGCCCTAGTCCAGGAACCTTGGATAGTGGAAGACAAGGTTTGTGGACTAGGGTCGAGGGAGTACAAGATGATTGTAGCTCCTAATGAAGGTAAAAA--------GCATTCTTGCCAGAAAGCACCTAAATATCTTTCTTCTCCATAATTATAGCAAAG-CGACAACACGGCGGCAAGCCTAGAGCTGAAAGGTACACATCTAAG
droPer2 scaffold_105:34767-34974 - ACGGAGCGGACGTAGCCCTAGTCCAGGAACCTTGGATAGTGGAAGACAAGGTTTGTGGACTAGGGTCGAGGGAGTACAAGATGATTGTAGCTCCTAATGAAGGTAAAAA--------GCATTCTTGCCAGAAAGCACCTAAATATCTTTCTGCTCCATAATTATAGCAAAG-CGACAACACGGCGGCAAGCCTAGAGCTGAAAGGTACACATCTAAG
droVir3 scaffold_13036:676357-676435 + GCGGAACTGATACTGCCATCATCCAGGACGATTGAGAAAATGTAGGCAACGAATCTGGAATATGGATATGGGTATGCAA------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14952:5042-5258 + GCGGAGACGACATAGTACTAGTCCAAGAACCTTGGGTGATTGGAGGAAAGGTTTGCGGACTAGGAAACAAAAATTACAAGCTGTTAGTAGCTGCAAATGAAGGTAAAAAACGTACCTGCATCCTCGCGAAAAAACATCTAAATATTTTTCTGCTCCATAATTTTAGCAATGATGACAACACAGCGGTAAGCTTGGAGCTCCAGTCAGCTTCGGTAAG
droAna3 scaffold_13417:5387321-5387535 + ATGGAGCCGATATAGTCCTAGTCCAGGAACCATGGATAGCAGGAGGAAGTGTTTCTGGACTAGGGACCAGGGAGTTCAAGCTACCAGTAGCTCGCTCTTAAGGTAAAATTAGAGCCTGCATTTTAGCTAAAAAGCACCTTAGCATATTTTTGCTCCATAATTATAGCGACGCAGAAAA--CGGCAGCTACCGTGGAGTTCCAGACGACTCTAATTCG
droBip1 scf7180000391956:22682-22893 + GTGGAGCTGATGTGGCCTTCATCCAGGAACCCTGGATCCTTGGAGACAAGATTCTTGGGCTGGGGGCATCGGAGTTTAGGCTCTGCAAAGCCGATACTACAGGTAAAA-----AGCTGCATTCTCGCAAAAAAGAACCTTAACCTCTTTTTGCTACCCAATTTCAGCAATGAAGACCACGTCGCCGCAGCCATAGAGAGCCCAAAGGGCCCTCTAAG
droEle1 scf7180000489666:21719-21934 + ACGGGGCAGACCTAGTGCTGGTACAAGAACCTTGGGTCGTTGGAGGCAAGGTCTATGGACTAGGCACCAAGGAATTCAAGTTGCTACTTGACCCTAAAGGAGGTAAAATTCAAACCTGCATTTTAGCCAAAAGGCACCTTAGCATATATCTGCTTCATAATTACAGCAACGGAGACAACACCGTAGCAAGCCTGGAACTTCCAGC-GGCTACTAAAG
droRho1 scf7180000773502:1046-1262 + GCGAAGCCGACGTGGTCTTAGTTCAGGAACCCTGGGTAGCAGGAGGCAGGGTTGCTGGACTGGGAACAAAAGACTACAAGCTGATGCTTGACCCCAAACAAGGTAAAATTCGAACCTGCATTTTAGCCAAACGGCATCTTAGTACATTTCTGCTTCACAAATACAGCAACGGAGACAACACAGCAATAAGCCTGGAGCTGCAAAGCGGCTCTTTTAG
droBia1 scf7180000297633:8888-9062 - GCGGAGCCGACCTGGTCCTAGTACAGGAACCTTGGGCAGTAGGAGGCAAGGTTGCTGGATTGGAAACAAAAGAATACAAGCT---------------------------TCGAAACTGCATTTTAGCCAAAAGGCATCTTAGTATATTTCTGCTTCGCAATTACAGCACCGGAGATAGCACCGCAGTAAGCCTGGAACTGCA---------------
droTak1 scf7180000413243:8721-8937 + GCGAAGCCGACGTGGTCCTAGTACAGGAACCTTGGGTAGTGGGAGGCAAGGTTGCTGGACTAGGAACGAGAGAGTATAAGCTAATGCTTGACCCCAAAGAAGGTAAAATTCGAACCTGCATTTTGGCCAAAAGGCACCTAAATATATTTCTGCTTCGCAATTACAGCAACGGAGATAACACCTCAGTAAGCCTGGAGCTGCAGCACGGCTCCATTAG
droYak3 chr2h:365390-365600 - ATGGAGTCGACATAGTCCTAATCCAGGAACCTTGGATAGTGGGAGGAAAGGTTTCAGGATTAGGGACTAAGGAATATAAGCTTCTAACAGCTCCCAACGAAGGTAAAATAAGAGCCTGCATTCTAGCCAAA-AGCACCTTAGCATTTTTCTGCTCCATAATTACAGCGATGCAGATAACGCGGCAGCCACCGTGAAGAGTCA-----GCCATCTCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ACGGAGCGGACATAGCCCTAGTCCAGGAACCTTGGATAGTGGAAGACAAGGTTTGTGGACTAGGGTCGAGGGAGTACAAGATGATTGTAGCTCCTAATGAAGGTAAAAA--------GCATTCTTGCCAGAAAGCACCTAAATATCTTTCTTCTCCATAATTATAGCAAAG-CGACAACACGGCGGCAAGCCTAGAGCTGAAAGGTACACATCTAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................CAAGGTTTGTGGACTAGGGTC......................................................................................................................................................21193.426506100002200
.............................................ACAAGGTTTGTGGACTAGGGT.......................................................................................................................................................21192.214203300004410
................................................AGGTTTGTGGACTAGGGTCG.....................................................................................................................................................20192.003803200004200
.......................CAGGAACCTTGGATAGTGGAAGAC..........................................................................................................................................................................2441.5060000000600
.............................................ACAAGGTTTGTGGACTAGGG........................................................................................................................................................20201.302602000004110
................................................AGGTTTGTGGACTAGGGTC......................................................................................................................................................19201.302621500017100
...............................................AAGGTTTGTGGACTAGGGTC......................................................................................................................................................20191.052001400005010
..................................................GTTTGTGGACTAGGGTCGAGG..................................................................................................................................................2111.0010100000000
.....................TCCAGGAACCTTGGATAGTGGAAGACAA........................................................................................................................................................................2831.0030000000300
........................................................GGACTAGGGTCGAGGGAGTA.............................................................................................................................................2011.0010100000000
...............................................AAGGTTTGTGGACTAGGGTCG.....................................................................................................................................................21181.001801400002110
...........................................AGACAAGGTTTGTGGACTAGG.........................................................................................................................................................21180.891601000001410
.....................TCCAGGAACCTTGGATAGTGG...............................................................................................................................................................................21200.801601600000000
......................CCAGGAACCTTGGATAGTGG...............................................................................................................................................................................20200.801601200002020
........................AGGAACCTTGGATAGTGGAAGAC..........................................................................................................................................................................2340.7530000000300
..............................................................................................................................................................................ACAACACGGCGGCAAGCCTAG......................21200.701401400000000
............................ACCTTGGATAGTGGAAGACAAG.......................................................................................................................................................................2230.6720200000000
.............................................................................................................................................................................GACAACACGGCGGCAAGCCTA.......................21200.651301200001000
.....................TCCAGGAACCTTGGATAGTGGAAGAC..........................................................................................................................................................................2640.5020000000200
...............................................................................................................................................................................CAACACGGCGGCAAGCCTAGA.....................21200.501001000000000
..............................................CAAGGTTTGTGGACTAGGGT.......................................................................................................................................................20190.4280400000040
..............................................CAAGGTTTGTGGACTAGGG........................................................................................................................................................19200.4080500001020
........................AGGAACCTTGGATAGTGGAAGACAAG.......................................................................................................................................................................2630.3310100000000
.......................CAGGAACCTTGGATAGTGGAAGACA.........................................................................................................................................................................2530.3310000000010
..................................................GTTTGTGGACTAGGGTCGA....................................................................................................................................................19200.3060600000000
............................................................................................................................................................................CGACAACACGGCGGCAAGCC.........................20200.3060600000000
.................................................................................................................................................................................ACACGGCGGCAAGCCTAGAGC...................21200.3060600000000
............................................................................................................................................................................CGACAACACGGCGGCAAGCCT........................21200.2550500000000
............................................GACAAGGTTTGTGGACTAGG.........................................................................................................................................................20190.2140300001000
.............................................ACAAGGTTTGTGGACTAGG.........................................................................................................................................................19200.2040400000000
..................................................................................................................................................................................CACGGCGGCAAGCCTAGAGCT..................21200.2040400000000
.............................................................................................................................................................................GACAACACGGCGGCAAGCC.........................19200.2040400000000
...............................................AAGGTTTGTGGACTAGGGTCGA....................................................................................................................................................22180.1730000000300
..............................................CAAGGTTTGTGGACTAGGGTCG.....................................................................................................................................................22180.1730200001000
................................................AGGTTTGTGGACTAGGGTCGT....................................................................................................................................................21190.1630300000000
....................................................................................................................................................................................CGGCGGCAAGCCTAGAGCTG.................20200.1530300000000
.........................................................................................................................................................................AG-CGACAACACGGCGGCAAG...........................20200.1530200000010
..................................................................................................................................................................................CACGGCGGCAAGCCTAGAGC...................20200.1531200000000
.............................................ACAAGGTTTGTGGACTAGGGTCG.....................................................................................................................................................23180.1120200000000
.................................................GGTTTGTGGACTAGGGTCG.....................................................................................................................................................19190.1120200000000
................................................AGGTTTGTGGACTAGGGTCGA....................................................................................................................................................21190.1120200000000
.........................................................................................................................................................................AG-CGACAACACGGCGGCAAGC..........................21200.1020200000000
.............................................................................................................................................................................GACAACACGGCGGCAAGCCTAG......................22200.1020200000000
..............................................................................................................................................................................ACAACACGGCGGCAAGCCTA.......................20200.1020200000000
...................................................TTTGTGGACTAGGGTCGA....................................................................................................................................................18200.1020100100000
.........................................................................................................................................................................AG-CGACAACACGGCGGCAAGT..........................21200.1020200000000
.........................................................................................................................................................................AG-CGACAACACGGCGGCAAGCC.........................22200.1020200000000
.................................................GGTTTGTGGACTAGGGTC......................................................................................................................................................18200.1020200000000
....................................................................................................................................................................................CGGCGGCAAGCCTAGAGCTGAA...............22200.1020200000000
...................................................................................................................................................................................ACGGCGGCAAGCCTAGAGCTG.................21200.1020200000000
....................................................................................................................................................................................CGGCGGCAAGCCTAGAGCTGA................21200.1020200000000
..........................................................................................................................................................................................CAAGCCTAGAGCTGAAAGG............19200.1020200000000
................................................AGGTTTGTGGACTAGGGTCT.....................................................................................................................................................20200.1020200000000
...........................................AGACAAGGTTTGTGGACTAGGGT.......................................................................................................................................................23180.0610100000000
...........................................AGACAAGGTTTGTGGACTAGGG........................................................................................................................................................22180.0610100000000
...............................................AAGGTTTGTGGACTAGGGTCGT....................................................................................................................................................22180.0610000001000
...........................................AGACAAGGTTTGTGGACTAGGGTC......................................................................................................................................................24180.0610100000000
.............................................ACAAGGTTTGTGGACTAGGGTT......................................................................................................................................................22190.0510100000000
..............................................CAAGGTTTGTGGACTAGGGTT......................................................................................................................................................21190.0510100000000
............................................GACAAGGTTTGTGGACTAGGG........................................................................................................................................................21190.0510000001000
...........................................AGACAAGGTTTGTGGACTAG..........................................................................................................................................................20200.0510100000000
........................AGGAACCTTGGATAGTGG...............................................................................................................................................................................18200.0510000000010
...............................................................................................................................................................................CAACACGGCGGCAAGCCTA.......................19200.0510100000000
..................................................................................................................................................................................CACGGCGGCAAGCCTAGAGCTGAAAG.............26200.0510100000000
.....................TCCAGGAACCTTGGATAGT.................................................................................................................................................................................19200.0510100000000
.................................................................................................................................................................................ACACGGCGGCAAGCCTAGAGCT..................22200.0510100000000
...............................................................................................................................................................................CAACACGGCGGCAAGCCTAGAGCTGAA...............27200.0510100000000
.................................................................................................................................................................................ACACGGCGGCAAGCCTAGAGT...................21200.0510100000000
.................................................................................................................................................................................ACACGGCGGCAAGCCTAGAGCTG.................23200.0510100000000
..............................................................................................................................................................................ACAACACGGCGGCAAGCCTAGAGCT..................25200.0510100000000
.............................................ACAAGGTTTGTGGACTAGGGC.......................................................................................................................................................21200.0510000000010
..................................................GTTTGTGGACTAGGGTCG.....................................................................................................................................................18200.0510100000000
.....................................................................................................................................................................................GGCGGCAAGCCTAGAGCTGAA...............21200.0510100000000
.................................................................................................................................................................................ACACGGCGGCAAGCCTAGAG....................20200.0510100000000
.................................................................................................................................................................................ACACGGCGGCAAGCCTAGA.....................19200.0510100000000
..................................................................................................................................................................................CACGGCGGCAAGCCTAGAGCTG.................22200.0510000001000
...............................................AAGGTTTGTGGACTAGGG........................................................................................................................................................18200.0510100000000
.............................................................................................................................................................................GACAACACGGCGGCAAGCCTAGA.....................23200.0510100000000
.........................................................................................................................................................................................GCAAGCCTAGAGCTGAAAGG............20200.0510100000000
................................................................................................................................................................................AACACGGCGGCAAGCCTAGAG....................21200.0510100000000
................................................AGGTTTGTGGACTAGGGT.......................................................................................................................................................18200.0510100000000
..............................................CAAGGTTTGTGGACTAGG.........................................................................................................................................................18200.0510100000000
..................................................................................................................................................................................CACGGCGGCAAGCCTAGAGCTTT................23200.0510100000000
.........................................................................................................................................................................................GCAAGCCTAGAGCTGAAAG.............19200.0510100000000
...............................................................................................................................................................................CAACACGGCGGCAAGCCTAGAGCT..................24200.0510100000000
............................................................................................................................................................................CGACAACACGGCGGCAAGCCTAG......................23200.0510100000000
........................................................................................................................................................................................GGCAAGCCTAGAGCTGAAAGG............21200.0510100000000
.............................................ACAAGGTTTGTGGACTAGT.........................................................................................................................................................19200.0510000100000
droPer2
ACGGAGCGGACGTAGCCCTAGTCCAGGAACCTTGGATAGTGGAAGACAAGGTTTGTGGACTAGGGTCGAGGGAGTACAAGATGATTGTAGCTCCTAATGAAGGTAAAAA--------GCATTCTTGCCAGAAAGCACCTAAATATCTTTCTGCTCCATAATTATAGCAAAG-CGACAACACGGCGGCAAGCCTAGAGCTGAAAGGTACACATCTAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................TAGTCCAGGAACCTTGGATAGTGGAA.............................................................................................................................................................................2640.251010000
.......................CAGGAACCTTGGATAGTGGAAGACAAG.......................................................................................................................................................................2750.201010000
..........CGTAGCCCTAGTCCAGGAACC..........................................................................................................................................................................................2160.171010000
....................................TAGTGGAAGACAAGGTTTGTGGACT............................................................................................................................................................2560.171010000
...................AGTCCAGGAACCTTGGATAGTGG...............................................................................................................................................................................2370.141010000
............TAGCCCTAGTCCAGGAACCTTGGAT....................................................................................................................................................................................2570.141010000
...................AGTCCAGGAACCTTGGATAGTG................................................................................................................................................................................2270.141010000
............TAGCCCTAGTCCAGGAACCTTGG......................................................................................................................................................................................2380.131010000
............TAGCCCTAGTCCAGGAACCTTG.......................................................................................................................................................................................2280.131010000
...............................................AAGGTTTGTGGACTAGGG........................................................................................................................................................18200.102000002
..............................................................................................................................................................................ACAACACGGCGGCAAGCCTAG......................21200.051010000
............................................GACAAGGTTTGTGGACTAG..........................................................................................................................................................19200.051010000
droVir3
GCGGAACTGATACTGCCATCATCCAGGACGATTGAGAAAATGTAGGCAACGAATCTGGAATATGGATATGGGTATGCAA------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......TGATACTGCCATCATCCAGGACGATTG.......................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droGri2
GCGGAGACGACATAGTACTAGTCCAAGAACCTTGGGTGATTGGAGGAAAGGTTTGCGGACTAGGAAACAAAAATTACAAGCTGTTAGTAGCTGCAAATGAAGGTAAAAAACGTACCTGCATCCTCGCGAAAAAACATCTAAATATTTTTCTGCTCCATAATTTTAGCAATGATGACAACACAGCGGTAAGCTTGGAGCTCCAGTCAGCTTCGGTAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............TACTAGTCCAAGAACCTTGGGTGATT................................................................................................................................................................................26200.05110
droAna3
ATGGAGCCGATATAGTCCTAGTCCAGGAACCATGGATAGCAGGAGGAAGTGTTTCTGGACTAGGGACCAGGGAGTTCAAGCTACCAGTAGCTCGCTCTTAAGGTAAAATTAGAGCCTGCATTTTAGCTAAAAAGCACCTTAGCATATTTTTGCTCCATAATTATAGCGACGCAGAAAA--CGGCAGCTACCGTGGAGTTCCAGACGACTCTAATTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTGGAGCTGATGTGGCCTTCATCCAGGAACCCTGGATCCTTGGAGACAAGATTCTTGGGCTGGGGGCATCGGAGTTTAGGCTCTGCAAAGCCGATACTACAGGTAAAA-----AGCTGCATTCTCGCAAAAAAGAACCTTAACCTCTTTTTGCTACCCAATTTCAGCAATGAAGACCACGTCGCCGCAGCCATAGAGAGCCCAAAGGGCCCTCTAAGSizeHit CountTotal NormTotal
No Reads
droEle1
ACGGGGCAGACCTAGTGCTGGTACAAGAACCTTGGGTCGTTGGAGGCAAGGTCTATGGACTAGGCACCAAGGAATTCAAGTTGCTACTTGACCCTAAAGGAGGTAAAATTCAAACCTGCATTTTAGCCAAAAGGCACCTTAGCATATATCTGCTTCATAATTACAGCAACGGAGACAACACCGTAGCAAGCCTGGAACTTCCAGC-GGCTACTAAAGSizeHit CountTotal NormTotal
No Reads
droRho1
GCGAAGCCGACGTGGTCTTAGTTCAGGAACCCTGGGTAGCAGGAGGCAGGGTTGCTGGACTGGGAACAAAAGACTACAAGCTGATGCTTGACCCCAAACAAGGTAAAATTCGAACCTGCATTTTAGCCAAACGGCATCTTAGTACATTTCTGCTTCACAAATACAGCAACGGAGACAACACAGCAATAAGCCTGGAGCTGCAAAGCGGCTCTTTTAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCGGAGCCGACCTGGTCCTAGTACAGGAACCTTGGGCAGTAGGAGGCAAGGTTGCTGGATTGGAAACAAAAGAATACAAGCT---------------------------TCGAAACTGCATTTTAGCCAAAAGGCATCTTAGTATATTTCTGCTTCGCAATTACAGCACCGGAGATAGCACCGCAGTAAGCCTGGAACTGCA---------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCGAAGCCGACGTGGTCCTAGTACAGGAACCTTGGGTAGTGGGAGGCAAGGTTGCTGGACTAGGAACGAGAGAGTATAAGCTAATGCTTGACCCCAAAGAAGGTAAAATTCGAACCTGCATTTTGGCCAAAAGGCACCTAAATATATTTCTGCTTCGCAATTACAGCAACGGAGATAACACCTCAGTAAGCCTGGAGCTGCAGCACGGCTCCATTAGSizeHit CountTotal NormTotal
No Reads
droYak3
ATGGAGTCGACATAGTCCTAATCCAGGAACCTTGGATAGTGGGAGGAAAGGTTTCAGGATTAGGGACTAAGGAATATAAGCTTCTAACAGCTCCCAACGAAGGTAAAATAAGAGCCTGCATTCTAGCCAAA-AGCACCTTAGCATTTTTCTGCTCCATAATTACAGCGATGCAGATAACGCGGCAGCCACCGTGAAGAGTCA-----GCCATCTCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........CATAGTCCTAATCCAGGAACCTTGGA.....................................................................................................................................................................................2692.6724060000000018
....AGTCGACATAGTCCTAATCCAGGAACC..........................................................................................................................................................................................2780.50404000000000
......................................................................................................................................................TGCTCCATAATTACAGCGATGCAGATT........................................27170.35601000000005
.........................................................................................................................................................................TGCAGATAACGCGGCAGCCAC...........................21200.35700000000007
..........CATAGTCCTAATCCAGGAACCTTG.......................................................................................................................................................................................24130.31404000000000
....AGTCGACATAGTCCTAATCCAGGA.............................................................................................................................................................................................2480.25202000000000
..................TAATCCAGGAACCTTGGATAGTGGGAG............................................................................................................................................................................2760.17101000000000
..........CATAGTCCTAATCCAGGAACCTT........................................................................................................................................................................................23130.15202000000000
......TCGACATAGTCCTAATCCAGGAACCTTG.......................................................................................................................................................................................2870.14101000000000
....AGTCGACATAGTCCTAATCCAGGAAC...........................................................................................................................................................................................2680.13101000000000
..GGAGTCGACATAGTCCTAATCCAGG..............................................................................................................................................................................................2580.13101000000000
.....GTCGACATAGTCCTAATCCAGGA.............................................................................................................................................................................................2380.13101000000000
...GAGTCGACATAGTCCTAATCCAGGAAC...........................................................................................................................................................................................2780.13101000000000
..........CATAGTCCTAATCCAGGAACCTTGG......................................................................................................................................................................................2590.11101000000000
..........CATAGTCCTAATCCAGGAACCTTGGAA....................................................................................................................................................................................2790.11101000000000
..........CATAGTCCTAATCCAGGAACCTTGGC.....................................................................................................................................................................................2690.11100000000001
.....................TCCAGGAACCTTGGATAGTGGGAGGA..........................................................................................................................................................................26200.10202000000000
.......CGACATAGTCCTAATCCAGGA.............................................................................................................................................................................................21110.09101000000000
..........CATAGTCCTAATCCAGGAACC..........................................................................................................................................................................................21140.07101000000000
....................................................................................................................................................................AGCGATGCAGATAACGCGGCAGCCAC...........................26190.05101000000000
.....................................AGTGGGAGGAAAGGTTTCAGGA..............................................................................................................................................................22200.05101000000000
................................................AGGTTTCAGGATTAGGGA.......................................................................................................................................................18200.05101000000000
..................................................................CTAAGGAATATAAGCTTCTAACAGCTCC...........................................................................................................................28200.05101000000000
..............................................AAAGGTTTCAGGATTAGGGAC......................................................................................................................................................21200.05100000010000
......................CCAGGAACCTTGGATAGTGGGAGGA..........................................................................................................................................................................25200.05101000000000
.........................................................................................................................................................TCCATAATTACAGCGATGCAGAT.........................................23200.05101000000000
..................................................................CTAAGGAATATAAGCTTCTAACAGC..............................................................................................................................25200.05100000010000
......................................................................................................................................................TGCTCCATAATTACAGCGATGCCT...........................................24200.05100000000001
................................TGGATAGTGGGAGGAAAGGTTTCAG................................................................................................................................................................25200.05101000000000
................................................................................................................................................................TTACAGCGATGCAGATAACGCGGCA................................25200.05101000000000
.......................................................................................................................................................GCTCCATAATTACAGCGATGCAGA..........................................24200.05101000000000

Generated: 05/18/2015 at 02:04 AM