ID:

dps_1903

 Coordinate:

Unknown_group_25:13815-13965 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.4 -9.1

Flybase annnotation

exon [dpse_GLEANR_11748:3]; CDS [Dpse\GA23189-cds]; intron [Dpse\GA23189-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
Helitron-1N1_DVirRCHelitron+
mature
  1. Unknown_group_39:123818-123840 +
  2. Unknown_group_230:22850-22872 -
  3. Unknown_group_321:9135-9157 -
  4. dps_1903  Unknown_group_25:13942-13964 -
  5. Unknown_group_50:3816-3838 +
  6. Unknown_group_265:1355-1377 +
  7. Unknown_group_265:8470-8492 +
  8. Unknown_group_265:15777-15799 +
  9. Unknown_group_265:18955-18977 -
  10. Unknown_group_270:6151-6173 -
  11. Unknown_group_105:20311-20333 -
  12. 4_group4:1022547-1022569 +
  13. XL_group1a:163540-163562 +
  14. XL_group1a:246724-246746 +
  15. XL_group1a:613955-613977 -
star
  1. Unknown_group_230:22826-22845 -
  2. Unknown_group_7:14712-14731 +
  3. Unknown_group_133:21924-21943 -
  4. dps_1903  Unknown_group_25:13918-13937 -
  5. 2:14189966-14189985 -
  6. 2:17245860-17245879 -
  7. 2:20674929-20674948 -
  8. Unknown_group_64:25776-25795 -
  9. XL_group3a:1918898-1918917 -
  10. 4_group1:5172199-5172218 +
  11. XL_group1a:163567-163586 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACTTTATGGGGTCGGAAACGTTTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATACACCCCAATACTCATTTTGAGTACCGGGTATAAAAAAGCTAGCATCAAAAATTTGTAGCAGAAAAAGTTTTCGTAATTTCGGAATTTTGTATGGCTTTAACTTAATTAACTAAATTAATTTATTATATTTCAGTCATATGACAGACAGCAAAAAAATAGAAAATGCTTGTTACTTCAACAAAA
***************************************************..................((((...((((((...))))))..)))).********************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 V112
male body		 GSM343916
embryo
............TCGGAAACGTTTCCTTCTGGACG........................................................................................................................................................................................................................ 23 0 7 2.43 17 12 3 0 2 0 0
............TCGGAAACGTTTCCTTCTGGACGT....................................................................................................................................................................................................................... 24 0 7 1.86 13 12 1 0 0 0 0
................................................................................................................................................................................................................................TAGAAAATGCTTGTTACTTCAAC.... 23 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AAAAAATAGAAAATGCTTGTT............ 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................ATTTCAGTCATATGACAGACAGC.................................. 23 0 1 1.00 1 1 0 0 0 0 0
.............CGGAAACGTTTCCTTCTGGACGT....................................................................................................................................................................................................................... 23 0 7 0.43 3 2 0 0 1 0 0
............TCGGAAACGTTTCCTTCTGGACGTT...................................................................................................................................................................................................................... 25 0 7 0.29 2 2 0 0 0 0 0
............TCGGAAACGTTTCCTTCTGGAC......................................................................................................................................................................................................................... 22 0 8 0.25 2 2 0 0 0 0 0
.......................TCCTTCTGGACGTTACACACATCCACT......................................................................................................................................................................................................... 27 0 20 0.25 5 0 0 5 0 0 0
...................................................TTACCACAAATCTAATACACCCCAAGAC............................................................................................................................................................................ 28 1 13 0.23 3 1 0 2 0 0 0
..........TGTCGGAAACGTTTCCTTCTGGACG........................................................................................................................................................................................................................ 25 1 10 0.20 2 2 0 0 0 0 0
............TCGGAAACGTTTCCTTCTGGACGTTAC.................................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
..........TGTCGGAAACGTTTCCTTCTGGACGT....................................................................................................................................................................................................................... 26 1 10 0.20 2 1 1 0 0 0 0
...................................................TTACCACAAATCTAATACACCCC................................................................................................................................................................................. 23 0 15 0.20 3 3 0 0 0 0 0
.ACTTTATGGGGTCGGAAACGTT.................................................................................................................................................................................................................................... 22 0 12 0.17 2 0 0 0 2 0 0
....................................................TACCACAAATCTAATACACCCCAAGAC............................................................................................................................................................................ 27 1 13 0.15 2 2 0 0 0 0 0
...................................................TTACCACAAATCTAATACACCCCAATAC............................................................................................................................................................................ 28 0 13 0.15 2 2 0 0 0 0 0
............................................................................................................................................................................................................TATGGGAGACAGCAAAAAAAAA......................... 22 3 7 0.14 1 1 0 0 0 0 0
.....................TTTCCTTCTGGACGTTACACACATCCA........................................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0 0 0
TACTTTATGGTGTCGGAAACGTT.................................................................................................................................................................................................................................... 23 1 17 0.12 2 0 2 0 0 0 0
........................CCTTCTGGACGTTACACACA............................................................................................................................................................................................................... 20 0 20 0.10 2 0 0 0 0 2 0
............TCGGAAACGTTTCCTTCTGGACGC....................................................................................................................................................................................................................... 24 1 11 0.09 1 0 0 1 0 0 0
..............................................................................CTCATTTTGAGTACCGGGTA......................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
...............GAAACGTTTCCTTCTGGACATT...................................................................................................................................................................................................................... 22 1 12 0.08 1 1 0 0 0 0 0
...TTTATGGGGTCGGAAACGTT.................................................................................................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0
...TTTATGGGGTCGGAAACGT..................................................................................................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0
.................AACGTTGCCTTCTGGACGTT...................................................................................................................................................................................................................... 20 1 13 0.08 1 1 0 0 0 0 0
....................................................TACCACAAATCTAATACACCC.................................................................................................................................................................................. 21 0 15 0.07 1 1 0 0 0 0 0
............TCGCAAACGTTTCCTTCTGGACGT....................................................................................................................................................................................................................... 24 1 15 0.07 1 0 1 0 0 0 0
...................................................TTACCACAAATCTAATACACCCCAA............................................................................................................................................................................... 25 0 15 0.07 1 0 1 0 0 0 0
.............................................................TCTAATACACCCCAATAC............................................................................................................................................................................ 18 0 16 0.06 1 1 0 0 0 0 0
.......TGGTGTCGGAAACGTTTCCTTCTG............................................................................................................................................................................................................................ 24 1 18 0.06 1 1 0 0 0 0 0
....................................................................................TTTCGTACCGGGTAAAAAAAA.................................................................................................................................................. 21 3 19 0.05 1 0 0 1 0 0 0
...................................................TTACCACAAATCGAATACACCCCAAT.............................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................TGCGCACGGGGTATAAAAAA.................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0
...................................................TGATCACAAATCTAATACACCCCAAT.............................................................................................................................................................................. 26 2 20 0.05 1 0 0 1 0 0 0
...................................................TTACCACAAATCGAATACACCCCA................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
....TTATGGGGGCGGAAAAGTTGC.................................................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 1
.....TATGGGGTCGGAAACGTTTCCC................................................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0
.............................TGGACGTTACACACATCCACT......................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
...................................................TTACCACAAATCGAATACACCCCAATA............................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ATGAAATACCCCAGCCTTTGCAAAGGAAGACCTGCAATGTGTGTAGGTGAAAATGGTGTTTAGATTATGTGGGGTTATGAGTAAAACTCATGGCCCATATTTTTTCGATCGTAGTTTTTAAACATCGTCTTTTTCAAAAGCATTAAAGCCTTAAAACATACCGAAATTGAATTAATTGATTTAATTAAATAATATAAAGTCAGTATACTGTCTGTCGTTTTTTTATCTTTTACGAACAATGAAGTTGTTTT
*********************************************************************************************************************************************************..................((((...((((((...))))))..)))).*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 SRR902010
ovaries
 M059
embryo
 SRR902012
CNS imaginal disc
 M062
head
 M022
male body		 GSM444067
head
 GSM343916
embryo
........................................................................................................................ACCATCGTCTTGTTCCAAAGC.............................................................................................................. 21 3 6 4.67 28 21 0 1 0 3 0 2 0 0 1
......................................GTGTGTAGGTGAAAATGGTGTT............................................................................................................................................................................................... 22 0 20 4.20 84 0 84 0 0 0 0 0 0 0 0
.......................................TGTGTAGGTGAAAATGGTGT................................................................................................................................................................................................ 20 0 20 2.60 52 47 0 0 4 0 0 0 0 0 1
.....................................TGTGTGTAGGTGAAAATGGTGT................................................................................................................................................................................................ 22 0 20 2.50 50 46 4 0 0 0 0 0 0 0 0
.....................................TGTGTGTAGGTGAAAATGGTGTTT.............................................................................................................................................................................................. 24 0 20 1.90 38 0 38 0 0 0 0 0 0 0 0
....................................ATGTGTGTAGGTGAAAATGGTGTTT.............................................................................................................................................................................................. 25 0 20 1.75 35 35 0 0 0 0 0 0 0 0 0
........................................................................................................................ACCATCGTCTCTTTCCAAAG............................................................................................................... 20 3 4 1.75 7 7 0 0 0 0 0 0 0 0 0
........................................................................................................................ACCATCGTCTTGTTCCAAAG............................................................................................................... 20 3 12 1.17 14 13 0 0 0 1 0 0 0 0 0
.......................................................GTGTTTAGGTTATGTGGGGTT............................................................................................................................................................................... 21 1 20 0.65 13 6 1 4 2 0 0 0 0 0 0
..........................................GTAGGTGAAAATGGTGTTT.............................................................................................................................................................................................. 19 0 20 0.60 12 0 0 0 12 0 0 0 0 0 0
......................................................GGTGTTTAGGTTATGTGGGGT................................................................................................................................................................................ 21 1 20 0.55 11 5 2 0 2 0 2 0 0 0 0
......................................GTGTGTAGGTGAAAATGGTGT................................................................................................................................................................................................ 21 0 20 0.55 11 0 0 11 0 0 0 0 0 0 0
...............................CTGCAATGTGTGTAGGTGAA........................................................................................................................................................................................................ 20 0 20 0.50 10 0 0 0 0 0 0 0 8 2 0
......................................GTGTGTAGGTGAAAATGGTGTTTA............................................................................................................................................................................................. 24 0 20 0.50 10 0 10 0 0 0 0 0 0 0 0
......................................................GGTGTTTAGGTTATGTGGGGTT............................................................................................................................................................................... 22 1 20 0.45 9 1 4 1 2 0 1 0 0 0 0
.................................GCAATGTGTGTAGGTGAAA....................................................................................................................................................................................................... 19 0 20 0.40 8 0 0 8 0 0 0 0 0 0 0
......................................GTGTGTAGGTGAAAATGGTG................................................................................................................................................................................................. 20 0 20 0.35 7 0 7 0 0 0 0 0 0 0 0
.....................AAAGGAAGACCTGCAATGTGTGTA.............................................................................................................................................................................................................. 24 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
..................................................AAATGGTGTTTAGGTTATGT..................................................................................................................................................................................... 20 1 19 0.21 4 0 1 0 2 0 0 0 0 1 0
................................................CAAAATGGTGTTTAGATTATG...................................................................................................................................................................................... 21 1 19 0.21 4 0 0 0 4 0 0 0 0 0 0
..GAAATACCCCAGCCTTTGCAAAGGAAG.............................................................................................................................................................................................................................. 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.................................................AAAATGGTGTTTAGGTTATGT..................................................................................................................................................................................... 21 1 17 0.18 3 0 0 1 0 0 2 0 0 0 0
......................................................GGTGTTTAGATTATGTGGGGT................................................................................................................................................................................ 21 0 18 0.17 3 1 2 0 0 0 0 0 0 0 0
..............................................GTGAAAATGGTGTTTAGATTA........................................................................................................................................................................................ 21 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0
...................................................GATGGTGTTTAGGTTATGTGG................................................................................................................................................................................... 21 2 20 0.15 3 0 1 0 2 0 0 0 0 0 0
............................................AGGTGAAAATGGTGTTTAGATTA........................................................................................................................................................................................ 23 0 20 0.15 3 0 0 0 3 0 0 0 0 0 0
................................................................TTATGTGGGGTTGTGAGTAG....................................................................................................................................................................... 20 2 20 0.15 3 0 0 0 3 0 0 0 0 0 0
...............CTTTGCAAAGGAAGACCTGC........................................................................................................................................................................................................................ 20 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................ATTTTTTCGAATGTAGTTTT..................................................................................................................................... 20 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1
............................................AGGTGAAAATGGTGTTTAGATTATG...................................................................................................................................................................................... 25 0 15 0.13 2 0 2 0 0 0 0 0 0 0 0
................................................GAAAATGGTGTTTAGATTATG...................................................................................................................................................................................... 21 0 16 0.13 2 0 2 0 0 0 0 0 0 0 0
....................................................ATGGTGTTTAGGTTATGTGGGGTTA.............................................................................................................................................................................. 25 1 16 0.13 2 0 0 0 0 0 2 0 0 0 0
.................................................AAAATGGTGTTTAGATTATG...................................................................................................................................................................................... 20 0 16 0.13 2 0 2 0 0 0 0 0 0 0 0
.....................AAAGGAAGACCTGCAATGTGTGT............................................................................................................................................................................................................... 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
...................................................AATGGTGTTTAGGTTGTGTGG................................................................................................................................................................................... 21 2 18 0.11 2 0 2 0 0 0 0 0 0 0 0
.........................................................GTTTAGGTTATGTGGGGTTGT............................................................................................................................................................................. 21 2 20 0.10 2 1 0 0 0 1 0 0 0 0 0
............................................AGGTGAAAATGGTGTTTAGATT......................................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0
.............................................GGTGAAAATGGTGTTTAGATTA........................................................................................................................................................................................ 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.............GCCTTTGCAAAGGAAGACCT.......................................................................................................................................................................................................................... 20 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.....................................................TGGTGTTTAGGTTATGTGGGGTTG.............................................................................................................................................................................. 24 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0
.............................................GGTGGAAATGGTGTTTAGATT......................................................................................................................................................................................... 21 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.............................................................................TGAGTAAAACTCATGGCCCATAT....................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
ATGAAATACCCCAGCCTTTGCA..................................................................................................................................................................................................................................... 22 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........CCCCAGCCTTTGCAAAGGAA............................................................................................................................................................................................................................... 20 0 14 0.07 1 0 0 0 0 0 0 1 0 0 0
...................................................................TGTGGGGTTATGAGTAAAACT................................................................................................................................................................... 21 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0
....................................................ATGGTGTTTAGGTTATGTGGG.................................................................................................................................................................................. 21 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0
.................................................................TATGTGGGGTTATGAGTAAAA..................................................................................................................................................................... 21 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0
..............................................GTGGGAATGGTGTTTAGATTATGT..................................................................................................................................................................................... 24 2 17 0.06 1 0 0 0 0 0 0 0 0 1 0
..................................................AAATGGTGTTTAGGTTATGTG.................................................................................................................................................................................... 21 1 17 0.06 1 1 0 0 0 0 0 0 0 0 0
................................................GAAAATGGTGTTTAGGTTATGT..................................................................................................................................................................................... 22 1 17 0.06 1 1 0 0 0 0 0 0 0 0 0
................................................................TTATGTGGGGTTATGAGTAAA...................................................................................................................................................................... 21 0 17 0.06 1 0 0 1 0 0 0 0 0 0 0
...................................................AATGGTGTTTAGGTTATGTG.................................................................................................................................................................................... 20 1 17 0.06 1 0 1 0 0 0 0 0 0 0 0
........................................................TGTTTAGATTATGTGGGGTTA.............................................................................................................................................................................. 21 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0
.............................................................AGGTTATGTGGGGTTATGAGT......................................................................................................................................................................... 21 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0
.......................................................GTGTTTAGATTATGTGGGGTT............................................................................................................................................................................... 21 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0
......................................................GGTGTTTAGGTTATGTGGGGTTGTGA........................................................................................................................................................................... 26 2 19 0.05 1 0 0 0 1 0 0 0 0 0 0
................................................GAAAATGGTGTTTAGGTTATG...................................................................................................................................................................................... 21 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GTTTAGGTTATGTGGGGTTATG............................................................................................................................................................................ 22 1 19 0.05 1 0 0 1 0 0 0 0 0 0 0
..........................................................TTTAGGTTATGTGGGGTTATG............................................................................................................................................................................ 21 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................GGTTATGTGGGGTTATGAGTA........................................................................................................................................................................ 21 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................TTAGATTATGTGGGGTTA.............................................................................................................................................................................. 18 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................TGTGTTTAGGTTATGTGGGGTT............................................................................................................................................................................... 22 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...........CAGCCTTTGCAAAGGAAGAC............................................................................................................................................................................................................................ 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..................................................AGATGGTGTTTAGGTTATGTG.................................................................................................................................................................................... 21 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
......................................CTGTGTAGGTGAAAATGGTGT................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.............................................................AGGTTATGTGGGGTTGTGAGT......................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................TGGTGTTTAGGTTATGGGG................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................AAAGGAAGACCTGCAACGTGTGTA.............................................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GTTTAGGTTATGTGGGGTTGTG............................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................TGGTGTTTAGGTTATGTGGGGTT............................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............................................................AGATTATGTGGGGTTGTGAGT......................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
................................................GAAAATGGTGTTTAGATTAT....................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.................TTGAAAAGGAAGACCTGCAAT..................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.............................................................AGGTTATGTGGGGTTATGA........................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TTGATTCAATTAAACAATA......................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................TTTAGATTATGTGGGGTGA.............................................................................................................................................................................. 19 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
......................................GTGTGTAGGTGAAAATGGTGTTTAGAT.......................................................................................................................................................................................... 27 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..........................................GTAGGTGAAAATGGTGTTTAG............................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.......................................................GTGTTTAGGTTATGTGGGGTTG.............................................................................................................................................................................. 22 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.........................................................TTTTAGGTTATGTGGGGTTATGAG.......................................................................................................................................................................... 24 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
..................................................GAATGGTGTTTAGGTTATGTG.................................................................................................................................................................................... 21 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................................TGGTGTTTAGGTTATGTGGGGT................................................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
........................................................TGTTTAGGTTATGTGGGGTTA.............................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................GTGTTTAGGTTATGTGGGGTTA.............................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................TTATGTGGGGTTATGGGTAGA...................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GTTTAGGTTGTGTGGGGTTAT............................................................................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................TGCAATGTGTGTAGGTGAAAA...................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..................................................AAATGGTGTTTAGGTTGTGTG.................................................................................................................................................................................... 21 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...........................................................TTAGGTTATGTGGGGTTGTGA........................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GTTTAGGTTATGTGGGGTTAT............................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................GTTTTTCGAACGTAGTTTCT.................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................TGGTGTTTAGGTTATGTGGG.................................................................................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0
...........................................TAGGTGAAAATGGTGTTTA............................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.................................GCAATGTGTGTAGGTGAAAATGGT.................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................GGAAATGGTGTTTAGGTTATG...................................................................................................................................................................................... 21 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAATTATCTGTCGTTTTTTTA.......................... 21 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_25:13765-14015 - dps_1903 TACTTTATGG-GGTCGGAAACGTTTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATACACCCCAATAC-TCAT----TTTGAGTACCGGGTATAAAAAA-----------GCTAGCATCAAAAA---TTTG----------------------TA-----------------------------GCAGAAAAAGTTTT-----------CGTAATTTCG-----------GAATTTTGT-ATGGCTT----------T-----------------------------------------------------------AACTTAATTAACTAAATTAATTTA----TTATA----------------TTT-----------------------------CAGT-------------------------------------------------CATA--------------------------------------------------------------------------------------------------------------------------TGA-CAGA---CAGCA-AAA-A--AATAGAAAATGCTTGTTACTTCA----------------------------ACAAA-A
droPer2 scaffold_55:228330-228580 - TACTTTATGG-GGTCGGAAACGCTTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATAC-TCAT----TTTGAGTACCGGGTATAAAAAA-----------GCTAGCATCAAAAA---TTTG----------------------TA-----------------------------GCAGAAAAAGTTTT-----------CGTAATTTCG-----------GAATTTTGT-ATGGCTT----------T-----------------------------------------------------------AACTTAATTAACTAAATTAATTTA----TTATA----------------TTT-----------------------------CAGT-------------------------------------------------CATA--------------------------------------------------------------------------------------------------------------------------TGA-CAGA---CAGCA-AAA-A--AATAGAAAATGCTTGTTACTTCA----------------------------ACAAA-A
droWil2 scf2_1100000004762:5492216-5492447 - TACTTTGTGG-GGTCGGAGATGCTTCCTTCTGCCTGTTACATACATT-------TTGGCGACTTTAATATACCATTTCAC-CC------TATGGGTGTATGGTATAAATAT-----------AA---TTTCTCTAA---TTTG----------------------TT---------------------------------A-------------------------------------------------------------------------------T------TAGAAATAAGTTTACCTTATAAAAT---------------------------------------------------------------------------------------------------ATATTTTCTCTAATTTGTTATTAGAAATAAGTTT---------------------------------------------------------------ACCTTGATTT--------------------------------------------------TTCCATC--AA----------TGA-AAGA---AATGA-AAT-T--GATGG---AAATT---TGCACCA----------------------------GCAGA-G
droVir3 scaffold_13050:150079-150339 - TACTTTATGG-GGTCGGAGATGATTCCTTCTGCCTGTTACATACATTTAGATTCTGCACAAATACAATATACCCTTATAG-CCATTTTTAATGGGTTCAGGGTATAAAATT-----------ACAATTT-------------A----------------------TA------------AA-------------------ATATACCTTTAAGACAACAAGTATGATGTTTTATTTCTTTATTTAATTTGT-ATTACTT----------T-----------------------------------------------------------AAAGAAAT-------------------------------------------------------------------------------------------TA-----------------------------------TA----------------ATTTA--------------------------AT--------------------------------ATCAAGAAATTA-------------------------------------------TA-TA-------------ATATT---TGCATCAACTTAAAATAACATATTTTTTTTTTTTTACTAA-A
droMoj3 scaffold_6500:18818547-18818778 + TACTTTGTGG-GGTCTGCCACGCCTCCTTCTGCCCGTTACATACTTT-------TTCACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAAAAAA-----------AAAA---------A---TGTA----------------------TA-----------------------------TCGTAATATATTTT-----------AATTCATAAA-----------AAATTATAT-ATTTTTT----------T-----------------------------------------------------------AG------TAAATAAATTGATA-A----ATATA----------------TAT-----------------------------AAAT--------------TA-----------------------------------TA--------------------------------------------------------------------------------------------------------------------------ATA-AAAA---TAATA-A-T-A--TATACAATATATTTATTTATTTA----------------------------ATATG-A
droGri2 scaffold_14906:3437604-3437824 + TACTTTATGG-AATCGGAGACGTCTCCGTCAATGCGTTACAAAATTT-------CTGACAATAATATAAAATCCTTTAG------------------AAGGGTATAATGAT-TGTAAATGA-CTTT-----AAAAA---T--ATCTTTGAAGCTTGGGCTAGTAGAAATGCAGTTTAAAAA-------------------TTGTGTCAATA----------------------------------------------------------------------------------------------------------------------AAATTAAGTAACTGAAGGACT-----------------------------------------------------------------------------------------------CTTATACT------------TT-----------------------------------------TGATGGAT--------------------------------GTGGAGAAAAAA---------------------------------------------------------CAA---------CATTTCG----------------------------ACACA-G
droAna3 scaffold_9922:43728-43937 + TACTTTATAG-GGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTC-------------TGCA-----AGGGTATAAAAAT-----------ATAAAAA----TAA---TATA----------------------TA-----------------------------TTAGAAAAAT---------------GAAAATATGA-----------AAAA-------------------------------------------------TATGCAT---------------------------------------------------------------GAAAAAAG--------------------------------------------------------------AAATTAAAAAAATATATAATAGAATA--TATA--------------------------------------------------------------------------------------------------------------------------TTA-GAAA---CGAGA-AAA-A--AATAGAAAAT-----ATACTAGA----------------------------AAAAA-T
droBip1 scf7180000396769:439814-440021 - TACTTTATGG-GGTCGGAGATGATTCTTTCTCTATGTTACATACATT-------CACACTAAACCAATATACCCTTGTTC-TC------TACGAGTACTTGGTATAAAAAC-----------ATCTAGA--------------------------------------------------------------------------TATATTT-----------TGTCATTTCC-----------GATTTTTGA-GTTTTTT------------------------------------------------------------------T------------------------------------TTCAGCTAAAG--------------------------------------------------------------AAT--------------------------------------------------------------------------------------------------------------------------------------TCATCCAAACTGTCTAATATAC-AGC--GTGTAAAAA-A--TAAGGAAAAA--T---------------------TGTATTTT------------TA-A
droKik1 scf7180000301906:4090-4326 + TACTTTATAG-GGTCGGAAACGTCTCCTTCACTGCGTTGCAAACCTC-------TGACTGAAATTATAATACCCTGCAAG-TG------TA-------------TAAAAAAAT---------GTTAACATCATT--------G---------------------------------------------------------------TTTC-----------CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATAGGCTTACTTTATTATTTCAAAATTTTGGTGTAAATTTTATGAAAATCGGACAACTATATCATATAGTTGCCATA--------------------------------------------------------------------------------------------------------------------------GGAAC-GAT--AGGGA-AAG-T--AATAGAAAAAA-T---------------------TATAACTTCGTTGTTTTTCAAC-A
droFic1 scf7180000450005:191-418 + TACTTTATGGGGGTCTCAGGTGTCTCCTTCAGTGCGTTGCAAACTTC-------TGGCCAAAATTATAATACCCT-TTGC-TC------TGCAA-----GGGTATAAAAAA-----------ATTCCCC--AAA-----A--A----------------------A--------------A-------------------A-------------------------------------------------------------------------------T------TTGAAAAAAATTTCCCAAAAACAATTTTTTTTTTTTAAATATC-------A----CAAAAAATTTCCCAAAAAAA--------A----ATATT---------------------------------T--------------TA-----------------------------------AA------------------------------------------------------------------------------------AAAAAATTACAAAAATTT--------------------------------CCCA-AAA-A--AATAAAAAA---------TTTAA----------------------------AAAAA-A
droEle1 scf7180000491107:136506-136736 + TACTTTACAT-GGTCGGAAACTCTTCCTTCCAGCTGTTAAAAACTTT-------TCAAGGAATACGATATACCCTTTTAC-TC------CAAGAGTAACGGGTATAATAAA-----------TGAAAAATAAAT---------------------------------------------------------------------------------------GATTATTTTGCAGTTTTTGAATTTTTTTTT-GTTTCT-----------------------------------------------------------------------------------------------------------------------------TTGAGATGTAGTAATGGTTTAATATTTCAGAAATACGGTTTAGATTTCATTAAAATTGAACGAATATATCATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTCCC----------------------------ATAGA-A
droRho1 scf7180000777889:4616-4845 - TACTTTATAG-GGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-------TGCACGAATACAATATACCCTTTTAC-TC------TACGAGTAACGGGTATAAAAAT-----------ACAATAC-------------A-------------------------------------A--------------TTACAATAAAGCTTT-----------CGCGATTT-------------------TGCGCTGTATTTTGCCATCGT----------------------------------------------------------TTC-------T---------------------------------------------AAGCGCAATAG-----------------------------------------------------------------------TGA-TATAGTAAATAATTATATA------------------------------------------------------------------------------------------------------GT-AACA---TAGTA-AAA-A--ATTTCAAAGGA------------------------ATA----TTTTGATAAACAAA-A
droBia1 scf7180000302098:218184-218428 - TATTTTATCG-GGTCGGAAACCCTTCCTTTTACCTGTTACATACTTT-------CTGACAAATCTAGTATGACCTTTTAG-TC------TATGAGTAACGGGTATAATAAT-----------AAGAATA--AAC--------G-------------------------------------G-------------------A---AATTTT-----------T------------------------------------------------AAAGAAGCTGTAATATTAATAAAAATATGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATACATTTCATAATATATATATATAAATATATATATTATTGAA----------------------------------------GATA---TTACA-TAA-A--AGTAGTAAAAATTTGTTA---CA----------AAACA----TTTTT-TTAAATAA-A
droTak1 scf7180000415779:1074916-1075134 - TACTTTATGG-GGTCGGAAACGCTTCCTTCTAGTTGTTACATACTTT-------TGCACGAATCTAATATACCCTTTTAC-TC------TACGAGTAACGGGTATAAATAC-----------CAGGAAA--------------------------------------------------------------------------AATATTT-----------TGAAATTT--------T-----------------TTTT------------------------------------------------------------------T------------------------------------TGCAG-----------------------------------------------------------------------------------------------------------TTATTATTAATTTTGATT--------------------------------------------------------------GGGAAAC-AA--CTTT--GCATCAAAACATTTTTGTTTTA-AGCCCCAGAA-AAA-A--AGTTGAAAAT--T--------------------------------TGACTTTCGAA-A
droEug1 scf7180000409477:12042-12262 - TACTTTATAG-GGTCGCAAACGCTTCTTTCTATCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGGTATAAATAG----------CTGAAGGTTCAAGT-------A----------------------TA-----------------------------GAGAAAAAATTTGT-----------TATTATTTTTAATTTAT----------T-----GAATT----------T-----------------------------------------------------------AAATTAAT----ATTTTTAATTTG----ATATA----------------TTT-----------------------------AAGT-------------------------------------------------G---------------------------------------------------------------------------------------AA------------------------------------------GA---TGGCA-TAT-AAGA-------ATAATATTTAATGGA----------------------------ACAAA-A
dm3 chr3RHet:1820637-1820845 + TACTTTATGA-AGTCGGAAAATTTTCCTTCTGCCTGTTACACACTTT-------TCAACGAAGC-AGTCTGCCTATTTAC-TC------TACGAGTAACGGGTATAAAAGT-----------GGTGCAAG-AC---------A-------------------------------------A-------------------ATTAAATTTTTAGGCACCGA------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------TCTTTATAATGAATAATGATTTAAGCTAAATTATAAATTACATGCGTTAATTTCT------------------------------------------------TTCCATA--------------TCC-GAAC---CA--------------------------------------------------------------GCAGAAA
droSim2 3r:297247-297487 - TACCTAAAAT-GTGCGGAAACGCTTCCTTCTGCCTGTTACATACTTT-------TCAACTAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTTTGAGCTTTAAAGGTTATAATTCTAGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATTTCGTTTTTAATTTAATAGAAAATGGGCTATTATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---TCGAA-AAT-G--AATTGAAAAAA-----------------------CGTATTTT------------CA-A
droSec2 scaffold_28:666697-666917 + TACTTTATGA-AGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTT-------TACACGATTCTACTATACCCTCTTAC-TC------TACGAGTCACGGGTATAATTAA-----------T-----ATC---AA---TTTG----------------------CA-------------------------------AAAAAAACTTTT-----------TGTCACACCCA----------CACTTTTGAAATGGTTTTCTCATTTAT----------------------------------------------------------TTC-------T----CAATTAATTTACCA-ATATA--------T--CTATATCTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAAAAAAA--TATAGATAT---A--------------------------------------TGAAA-T
droYak3 v2_chrUn_2165:24507-24745 + TACTTTATAT-GGTCGGAAACCCTTCCTTCTGCCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTAC-TC------TTCGAGTAACGGGTATAAAAAC-----------CTTT-----ATAAA---TTTG----------------------AAATACA--------A--------------CTTAGATAAAGATAT-----------TTT------T---------------------------------AATTT----------------------------------------------------------TTC-------T----GTATTAATTCA----TTAAT--------T--TTAAATTTCAATATATTGTGGTA---------------------------------------------------------------T------------------------------------------------GCGTACAT--------------------------------ATCGAGAAGACA---------------------------------C-GGT--ACTCA-GA-------------ATACT---TGCACAAAT---------C---------------AGCAAT-A
droEre2 scaffold_4845:441540-441760 + TACTTTATAT-GGTCGGAAACGCTTCTTTCTGCCTGTTACATACTTT-------TCAACGGATCTAGTATACCCTTTTAC-TC------TATGAGTAACTGGTATAAAAAG-----------AGTTCAATCAAAATTTATATA----------------------TA---T--------AAATAGAAGTATGTGATTACAGAAATATTTT-----------AG-ATTTT--------T----------A----------------------------------------------------------------------------------------TAATTTTATTTATTTA----TTATT----------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG------CT-GAA-A--ATATTTAAATTATTATTATTTGA----------------------------ATAAA-A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TACTTTATGG-GGTCGGAAACGTTTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATACACCCCAATAC-TCAT----TTTGAGTACCGGGTATAAAAAA-----------GCTAGCATCAAAAA---TTTG----------------------TA-----------------------------GCAGAAAAAGTTTT-----------CGTAATTTCG-----------GAATTTTGT-ATGGCTT----------T-----------------------------------------------------------AACTTAATTAACTAAATTAATTTA----TTATA----------------TTT-----------------------------CAGT-------------------------------------------------CATA--------------------------------------------------------------------------------------------------------------------------TGA-CAGA---CAGCA-AAA-A--AATAGAAAATGCTTGTTACTTCA----------------------------ACAAA-ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............TCGGAAACGTTTCCTTCTGGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2372.431701200000320
.............TCGGAAACGTTTCCTTCTGGACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2471.861301200000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAATGCTTGTTACTTCA----------------------------AC.....2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-A--AATAGAAAATGCTTGTT.........................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................A----------------TTT-----------------------------CAGT-------------------------------------------------CATA--------------------------------------------------------------------------------------------------------------------------TGA-CAGA---CAGC...................................................................2311.0010100000000
..............CGGAAACGTTTCCTTCTGGACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.4330200000010
.............TCGGAAACGTTTCCTTCTGGACGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.2920200000000
.............TCGGAAACGTTTCCTTCTGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.2520200000000
........................TCCTTCTGGACGTTACACACATCCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2550050000000
.............TCGGAAACGTTTCCTTCTGGACGTTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
....................................................TTACCACAAATCTAATACACCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.2030300000000
.ACTTTATGG-GGTCGGAAACGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.1720000000020
....................................................TTACCACAAATCTAATACACCCCAATAC-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28130.1520200000000
......................TTTCCTTCTGGACGTTACACACATCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.1310100000000
.........................CCTTCTGGACGTTACACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000002000
.............TCGGAAACGTTTCCTTCTGGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0910010000000
...............................................................................C-TCAT----TTTGAGTACCGGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910100000000
...TTTATGG-GGTCGGAAACGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0810100000000
...TTTATGG-GGTCGGAAACGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.0810100000000
.....................................................TACCACAAATCTAATACACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710100000000
....................................................TTACCACAAATCTAATACACCCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.0710000000100
..............................................................TCTAATACACCCCAATAC-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18160.0610100000000
.....TATGG-GGTCGGAAACGTTTCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..............................TGGACGTTACACACATCCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
droPer2
TACTTTATGG-GGTCGGAAACGCTTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATAC-TCAT----TTTGAGTACCGGGTATAAAAAA-----------GCTAGCATCAAAAA---TTTG----------------------TA-----------------------------GCAGAAAAAGTTTT-----------CGTAATTTCG-----------GAATTTTGT-ATGGCTT----------T-----------------------------------------------------------AACTTAATTAACTAAATTAATTTA----TTATA----------------TTT-----------------------------CAGT-------------------------------------------------CATA--------------------------------------------------------------------------------------------------------------------------TGA-CAGA---CAGCA-AAA-A--AATAGAAAATGCTTGTTACTTCA----------------------------ACAAA-ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................TCAT----TTTGAGTACCGGGTATAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.111010000
.................AAACGCTTCCTTCTGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
droWil2
TACTTTGTGG-GGTCGGAGATGCTTCCTTCTGCCTGTTACATACATT-------TTGGCGACTTTAATATACCATTTCAC-CC------TATGGGTGTATGGTATAAATAT-----------AA---TTTCTCTAA---TTTG----------------------TT---------------------------------A-------------------------------------------------------------------------------T------TAGAAATAAGTTTACCTTATAAAAT---------------------------------------------------------------------------------------------------ATATTTTCTCTAATTTGTTATTAGAAATAAGTTT---------------------------------------------------------------ACCTTGATTT--------------------------------------------------TTCCATC--AA----------TGA-AAGA---AATGA-AAT-T--GATGG---AAATT---TGCACCA----------------------------GCAGA-GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................TTAATATACCATTTCAC-CC------TATGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
......GTGG-GGTCGGAGATGCTTCCTTCTGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100100
..................................TGTTACATACATT-------TTGGCGACTTTAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.....TGTGG-GGTCGGAGATGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100100
droVir3
TACTTTATGG-GGTCGGAGATGATTCCTTCTGCCTGTTACATACATTTAGATTCTGCACAAATACAATATACCCTTATAG-CCATTTTTAATGGGTTCAGGGTATAAAATT-----------ACAATTT-------------A----------------------TA------------AA-------------------ATATACCTTTAAGACAACAAGTATGATGTTTTATTTCTTTATTTAATTTGT-ATTACTT----------T-----------------------------------------------------------AAAGAAAT-------------------------------------------------------------------------------------------TA-----------------------------------TA----------------ATTTA--------------------------AT--------------------------------ATCAAGAAATTA-------------------------------------------TA-TA-------------ATATT---TGCATCAACTTAAAATAACATATTTTTTTTTTTTTACTAA-ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................AATGGGTTCAGGGTATAAAATT-----------ACAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT---TGCATCAACTTAAAATAACATA....................2621.002000000000000000000000000002000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT---TGCATCAACTTAAA............................1850.804000000000000000000000000100000001001010000000000000000000000000
...........................................................................TATAG-CCATTTTTAATGGGTTCAGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.153000000000000000000000000000000030000000000000000000000000000000
...TTTATGG-GGTCGGAGATGATTCCTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27160.061000000001000000000000000000000000000000000000000000000000000000
.............................................................................TAG-CCATTTTTAATGGGTTCAGGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
...........................TTCTGCCTGTTACATACATTTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
droMoj3
TACTTTGTGG-GGTCTGCCACGCCTCCTTCTGCCCGTTACATACTTT-------TTCACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAAAAAA-----------AAAA---------A---TGTA----------------------TA-----------------------------TCGTAATATATTTT-----------AATTCATAAA-----------AAATTATAT-ATTTTTT----------T-----------------------------------------------------------AG------TAAATAAATTGATA-A----ATATA----------------TAT-----------------------------AAAT--------------TA-----------------------------------TA--------------------------------------------------------------------------------------------------------------------------ATA-AAAA---TAATA-A-T-A--TATACAATATATTTATTTATTTA----------------------------ATATG-ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................TTACATACTTT-------TTCACAAAACCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
..........................................................................TGATTTCCCATTTTCAATGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
....................................................................................TTTTCAATGGGTTCAGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
droGri2
TACTTTATGG-AATCGGAGACGTCTCCGTCAATGCGTTACAAAATTT-------CTGACAATAATATAAAATCCTTTAG------------------AAGGGTATAATGAT-TGTAAATGA-CTTT-----AAAAA---T--ATCTTTGAAGCTTGGGCTAGTAGAAATGCAGTTTAAAAA-------------------TTGTGTCAATA----------------------------------------------------------------------------------------------------------------------AAATTAAGTAACTGAAGGACT-----------------------------------------------------------------------------------------------CTTATACT------------TT-----------------------------------------TGATGGAT--------------------------------GTGGAGAAAAAA---------------------------------------------------------CAA---------CATTTCG----------------------------ACACA-GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TACTTTATAG-GGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTC-------------TGCA-----AGGGTATAAAAAT-----------ATAAAAA----TAA---TATA----------------------TA-----------------------------TTAGAAAAAT---------------GAAAATATGA-----------AAAA-------------------------------------------------TATGCAT---------------------------------------------------------------GAAAAAAG--------------------------------------------------------------AAATTAAAAAAATATATAATAGAATA--TATA--------------------------------------------------------------------------------------------------------------------------TTA-GAAA---CGAGA-AAA-A--AATAGAAAAT-----ATACTAGA----------------------------AAAAA-TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................TGCGTTGCACACTTT-------TGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.408080000
..........................................................CAAAATTATAATACCCTC-------------TGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204400000
.......................CTCCTTCACTGCGTTGCACACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
......ATAG-GGTCGGAGATGTCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102020000
................GAGATGTCTCCTTCACTGCGTTGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
.......................CTCCTTCACTGCGTTGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droBip1
TACTTTATGG-GGTCGGAGATGATTCTTTCTCTATGTTACATACATT-------CACACTAAACCAATATACCCTTGTTC-TC------TACGAGTACTTGGTATAAAAAC-----------ATCTAGA--------------------------------------------------------------------------TATATTT-----------TGTCATTTCC-----------GATTTTTGA-GTTTTTT------------------------------------------------------------------T------------------------------------TTCAGCTAAAG--------------------------------------------------------------AAT--------------------------------------------------------------------------------------------------------------------------------------TCATCCAAACTGTCTAATATAC-AGC--GTGTAAAAA-A--TAAGGAAAAA--T---------------------TGTATTTT------------TA-ASizeHit CountTotal NormTotal
No Reads
droKik1
TACTTTATAG-GGTCGGAAACGTCTCCTTCACTGCGTTGCAAACCTC-------TGACTGAAATTATAATACCCTGCAAG-TG------TA-------------TAAAAAAAT---------GTTAACATCATT--------G---------------------------------------------------------------TTTC-----------CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATATAGGCTTACTTTATTATTTCAAAATTTTGGTGTAAATTTTATGAAAATCGGACAACTATATCATATAGTTGCCATA--------------------------------------------------------------------------------------------------------------------------GGAAC-GAT--AGGGA-AAG-T--AATAGAAAAAA-T---------------------TATAACTTCGTTGTTTTTCAAC-ASizeHit CountTotal NormTotal
No Reads
droFic1
TACTTTATGGGGGTCTCAGGTGTCTCCTTCAGTGCGTTGCAAACTTC-------TGGCCAAAATTATAATACCCT-TTGC-TC------TGCAA-----GGGTATAAAAAA-----------ATTCCCC--AAA-----A--A----------------------A--------------A-------------------A-------------------------------------------------------------------------------T------TTGAAAAAAATTTCCCAAAAACAATTTTTTTTTTTTAAATATC-------A----CAAAAAATTTCCCAAAAAAA--------A----ATATT---------------------------------T--------------TA-----------------------------------AA------------------------------------------------------------------------------------AAAAAATTACAAAAATTT--------------------------------CCCA-AAA-A--AATAAAAAA---------TTTAA----------------------------AAAAA-ASizeHit CountTotal NormTotal
No Reads
droEle1
TACTTTACAT-GGTCGGAAACTCTTCCTTCCAGCTGTTAAAAACTTT-------TCAAGGAATACGATATACCCTTTTAC-TC------CAAGAGTAACGGGTATAATAAA-----------TGAAAAATAAAT---------------------------------------------------------------------------------------GATTATTTTGCAGTTTTTGAATTTTTTTTT-GTTTCT-----------------------------------------------------------------------------------------------------------------------------TTGAGATGTAGTAATGGTTTAATATTTCAGAAATACGGTTTAGATTTCATTAAAATTGAACGAATATATCATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTCCC----------------------------ATAGA-ASizeHit CountTotal NormTotal
No Reads
droRho1
TACTTTATAG-GGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-------TGCACGAATACAATATACCCTTTTAC-TC------TACGAGTAACGGGTATAAAAAT-----------ACAATAC-------------A-------------------------------------A--------------TTACAATAAAGCTTT-----------CGCGATTT-------------------TGCGCTGTATTTTGCCATCGT----------------------------------------------------------TTC-------T---------------------------------------------AAGCGCAATAG-----------------------------------------------------------------------TGA-TATAGTAAATAATTATATA------------------------------------------------------------------------------------------------------GT-AACA---TAGTA-AAA-A--ATTTCAAAGGA------------------------ATA----TTTTGATAAACAAA-ASizeHit CountTotal NormTotal
No Reads
droBia1
TATTTTATCG-GGTCGGAAACCCTTCCTTTTACCTGTTACATACTTT-------CTGACAAATCTAGTATGACCTTTTAG-TC------TATGAGTAACGGGTATAATAAT-----------AAGAATA--AAC--------G-------------------------------------G-------------------A---AATTTT-----------T------------------------------------------------AAAGAAGCTGTAATATTAATAAAAATATGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATACATTTCATAATATATATATATAAATATATATATTATTGAA----------------------------------------GATA---TTACA-TAA-A--AGTAGTAAAAATTTGTTA---CA----------AAACA----TTTTT-TTAAATAA-ASizeHit CountTotal NormTotal
No Reads
droTak1
TACTTTATGG-GGTCGGAAACGCTTCCTTCTAGTTGTTACATACTTT-------TGCACGAATCTAATATACCCTTTTAC-TC------TACGAGTAACGGGTATAAATAC-----------CAGGAAA--------------------------------------------------------------------------AATATTT-----------TGAAATTT--------T-----------------TTTT------------------------------------------------------------------T------------------------------------TGCAG-----------------------------------------------------------------------------------------------------------TTATTATTAATTTTGATT--------------------------------------------------------------GGGAAAC-AA--CTTT--GCATCAAAACATTTTTGTTTTA-AGCCCCAGAA-AAA-A--AGTTGAAAAT--T--------------------------------TGACTTTCGAA-ASizeHit CountTotal NormTotal
No Reads
droEug1
TACTTTATAG-GGTCGCAAACGCTTCTTTCTATCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGGTATAAATAG----------CTGAAGGTTCAAGT-------A----------------------TA-----------------------------GAGAAAAAATTTGT-----------TATTATTTTTAATTTAT----------T-----GAATT----------T-----------------------------------------------------------AAATTAAT----ATTTTTAATTTG----ATATA----------------TTT-----------------------------AAGT-------------------------------------------------G---------------------------------------------------------------------------------------AA------------------------------------------GA---TGGCA-TAT-AAGA-------ATAATATTTAATGGA----------------------------ACAAA-ASizeHit CountTotal NormTotal
No Reads
dm3
TACTTTATGA-AGTCGGAAAATTTTCCTTCTGCCTGTTACACACTTT-------TCAACGAAGC-AGTCTGCCTATTTAC-TC------TACGAGTAACGGGTATAAAAGT-----------GGTGCAAG-AC---------A-------------------------------------A-------------------ATTAAATTTTTAGGCACCGA------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------TCTTTATAATGAATAATGATTTAAGCTAAATTATAAATTACATGCGTTAATTTCT------------------------------------------------TTCCATA--------------TCC-GAAC---CA--------------------------------------------------------------GCAGAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................TT-------TCAACGAAGC-AGTCTGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
..........................CTTCTGCCTGTTACACACTTT-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21181.39250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053540125000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAACGGGTATAAAAGT-----------GGTGCAAG-AC---------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAACGGGTATAAAAGT-----------GGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................................................ACGGGTATAAAAGT-----------GGTGCAAG-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTGCCTGTTACACACTTT-------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.83150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020054000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTCCTTCTGCCTGTTACACACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TTAC-TC------TACGAGTAACGGGTATAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTTAC-TC------TACGAGTAACGGGTATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................C------TACGAGTAACGGGTATAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000200000000000000000000000000000000000
........................TCCTTCTGCCTGTTACACACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTTCTGCCTGTTACACACTTT-------TCAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAC-TC------TACGAGTAACGGGTATAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000003020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTTAC-TC------TACGAGTAACGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................CTGCCTGTTACACACTTT-------TCAACGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTTCTGCCTGTTACACACTTT-------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAC-TC------TACGAGTAACGGGTATAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TC------TACGAGTAACGGGTATAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TTAC-TC------TACGAGTAACGGGTATAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTTAC-TC------TACGAGTAACGGGTATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................TTTAC-TC------TACGAGTAACGGGTATAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................TCTGCCTGTTACACACTTT-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTTCTGCCTGTTACACACTTT-------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AC-TC------TACGAGTAACGGGTATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TC------TACGAGTAACGGGTATAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TACGAGTAACGGGTATAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTTAC-TC------TACGAGTAACGGGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AC-TC------TACGAGTAACGGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TACCTAAAAT-GTGCGGAAACGCTTCCTTCTGCCTGTTACATACTTT-------TCAACTAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTTTGAGCTTTAAAGGTTATAATTCTAGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATTTCGTTTTTAATTTAATAGAAAATGGGCTATTATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---TCGAA-AAT-G--AATTGAAAAAA-----------------------CGTATTTT------------CA-ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................TAC-TC------TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28111.001100000051410000000
.................................................................................................................................................................................................................................................................................TGAGCTTTAAAGGTTATAATTCTAGG....................................................................................................................................................................................................................................................................................................................................................................................2617.00700000040210000000
.............................................................................TAC-TC------TACGAGTAACGGATATACAAGA-----------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.00600000050100000000
.................................................................................TC------TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.00500000030200000000
.........................................................................................TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00500000030200000000
.................................................................................TC------TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000010110000000
.......................................................................................................................................................................................................................................................................................................TAGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATTTCGTT.........................................................................................................................................................................................................................................................2812.00200000010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTATATAATCGAGCTGCC...............................................................................................................................................................................................................2112.00200200000000000000
.........................................................................................TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010000010000
...............................................................................................................................................................................................................................................................................TTTGAGCTTTAAAGGTTATAATTCTAGG....................................................................................................................................................................................................................................................................................................................................................................................2812.00200000010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---TCGAA-AAT-G--AATTGAAAA.................................................2811.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---T......................................................................2811.00100000000001000000
..................................................................................C------TACGAGTAACGGATATAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---.......................................................................2811.00100000001000000000
...........................................................................................................AAGA-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTTTGAGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------..................................................................................2011.00100000010000000000
........................................................................................................................................................................................................................................................................................TAAAGGTTATAATTCTAGGTATCCAGC............................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---T......................................................................2511.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACA............................................................................2211.00100000000001000000
.................................................................................................................................................................................................................................................................................................TAATTCTAGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAA................................................................................................................................................................................................................................................................2711.00100000000100000000
.............................................................................................................................................................................................................................................................................................................TCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATTTCGTTTT.......................................................................................................................................................................................................................................................2411.00100000000010000000
.........................................................................................TACGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.......................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------------------------AAAATTTCGTTTTTAATTTAATAGA...........................................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................CGAGTAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---TCGAA-AAT-G--AA........................................................2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGAC.............................................................................2811.00100000010000000000
TACCTAAAAT-GTGCGGAAACGCTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------------------------AAAATTTCGTTTTTAATTTAATAGAAA.........................................................................................................................................................................................................................................2811.00100000000010000000
.....AAAAT-GTGCGGAAACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGG...............................................................................2611.00100000010000000000
........................................................................................................................................................................................................................................................................................................AGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATTTCGTT.........................................................................................................................................................................................................................................................2711.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATATAATCGAGCTGCCATA--------------------------------------------------------------------------------------------------------------------------GGGA..............................................................................2711.00100000000100000000
........................................................................................................TACAAGA-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTTTGAGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAA-AAT-G--AATTGAAAAAA-----------------------CGTATT..................2611.00100000000001000000
.......................................................................................................................................................................................................................................................................................................TAGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATTTCA...........................................................................................................................................................................................................................................................2611.00100000000001000000
.................................................................................................................................................................................................................T-----------C------------------------------------------------TTTTGAGCTTTAAAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...............................................................................................TAACGGATATACAAGA-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTT..............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
........................................................................................................TACAAGA-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTTTGAGCTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
TACCTAAAAT-GTGCGGAAACGCTTCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................................TCTAGGTATCCAGCAATAT---------------------------------------------------------------------------------------------------AAAATT..............................................................................................................................................................................................................................................................2511.00100000000001000000
..........................................................................TTTTAC-TC------TACGAGTAACGGATATACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCATA--------------------------------------------------------------------------------------------------------------------------GGGACAGT---TCGAA-AAT-G--AAT.......................................................2711.00100000000100000000
..............................................................................................................A-----------A---------------------------------------------------------------------------------AGTTTT-----------C------------------------------------------------TTTTGAGCTTTAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..........................................................................................ACGAGTAACGGATATACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100000000001000000
...................................................................TATACCCTTTTAC-TC------TACGAGTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
....TAAAAT-GTGCGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
.............................CTGCCTGTTACATACTTT-------TCAACTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000000100000000
............................TCTGCCTGTTACATACTTT-------TCAACTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100000010000000000
..........................CTTCTGCCTGTTACATACTTT-------TCAACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100000000100000000
........................TCCTTCTGCCTGTTACATACTTT-------TCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.20400000022000000000
............................................TTT-------TCAACTAATCTAGTATACCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.20100000000000010000
.....................................................................TACCCTTTTAC-TC------TACGAGTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.13100000000100000000
..........................................................................TTTTAC-TC------TACGAGTAACGGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10100000000001000000
.......................TTCCTTCTGCCTGTTACATACTTT-------TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000000000020000
.......................TTCCTTCTGCCTGTTACATACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
................................................................TAGTATACCCTTTTAC-TC------TACGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000000000
..........................CTTCTGCCTGTTACATACTTT-------TCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
.......................TTCCTTCTGCCTGTTACATACTTT-------TCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000010000
.......................................................................CCCTTTTAC-TC------TACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
....................CGCTTCCTTCTGCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
.............................CTGCCTGTTACATACTTT-------TCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
.................................................................AGTATACCCTTTTAC-TC------TACGAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
droSec2
TACTTTATGA-AGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTT-------TACACGATTCTACTATACCCTCTTAC-TC------TACGAGTCACGGGTATAATTAA-----------T-----ATC---AA---TTTG----------------------CA-------------------------------AAAAAAACTTTT-----------TGTCACACCCA----------CACTTTTGAAATGGTTTTCTCATTTAT----------------------------------------------------------TTC-------T----CAATTAATTTACCA-ATATA--------T--CTATATCTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAAAAAAA--TATAGATAT---A--------------------------------------TGAAA-TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................TTCCTTCTGCCTGTTACATACTTT-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1022000
.......................TTCCTTCTGCCTGTTACATACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
droYak3
TACTTTATAT-GGTCGGAAACCCTTCCTTCTGCCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTAC-TC------TTCGAGTAACGGGTATAAAAAC-----------CTTT-----ATAAA---TTTG----------------------AAATACA--------A--------------CTTAGATAAAGATAT-----------TTT------T---------------------------------AATTT----------------------------------------------------------TTC-------T----GTATTAATTCA----TTAAT--------T--TTAAATTTCAATATATTGTGGTA---------------------------------------------------------------T------------------------------------------------GCGTACAT--------------------------------ATCGAGAAGACA---------------------------------C-GGT--ACTCA-GA-------------ATACT---TGCACAAAT---------C---------------AGCAAT-ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................TAC-TC------TTCGAGTAACGGGTATAAAAAC-----------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--ACTCA-GA-------------ATACT---TGCACAAAT---------C---------------AG......26100.30303000000000
........................TCCTTCTGCCTGTTACATACTTT-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.25505000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--ACTCA-GA-------------ATACT---TGCACAAAT---------C---------------A.......25110.18202000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--ACTCA-GA-------------ATACT---TGCACAAAT---------........................23110.09101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--ACTCA-GA-------------ATACT---TGCACAAAT---------C---------------........24110.09100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTCA-GA-------------ATACT---TGCACAAAT---------C---------------........23110.09101000000000
droEre2
TACTTTATAT-GGTCGGAAACGCTTCTTTCTGCCTGTTACATACTTT-------TCAACGGATCTAGTATACCCTTTTAC-TC------TATGAGTAACTGGTATAAAAAG-----------AGTTCAATCAAAATTTATATA----------------------TA---T--------AAATAGAAGTATGTGATTACAGAAATATTTT-----------AG-ATTTT--------T----------A----------------------------------------------------------------------------------------TAATTTTATTTATTTA----TTATT----------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG------CT-GAA-A--ATATTTAAATTATTATTATTTGA----------------------------ATAAA-ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:07 AM