ID:

dps_1873

 Coordinate:

Unknown_group_22:51816-51966 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.9 -23.7 -23.7

Flybase annnotation

CDS [Dpse\GA27662-cds]; exon [dpse_GLEANR_6666:1]; intron [Dpse\GA27662-in]

Repeatable elements

NameClassFamilyStrand
Transib-N1_DYaDNATransib+

Sense Strand Reads

---------------------------------------###########---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCCACTTGACGGTGCAGTAACTGCATCGCCCCTTGAAAGATGCAGTCATTGCATGTCAACGTCCAAGAAAGATTAGAGTGACAGACGATTACATGCTCGAAAGGATTCACGACGCAACAATATGACAGGTGTTTTCCAAAGAGCAATGGATTCCTCTGATTCTCTTGTATCGAGCATCTATCTGGCAAAAAGATTGGGTGGAAATAAAAAGGATTCATTGCCGAAAGCTGTTATTGAACTTTTAGAAACAC
*************************************************************************.((((...((((.((...(((((((....(((..(((....((......))....)))..)))....)))).)))...)).))))...))))........****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 V112
male body		 M062
head
...........................................AGTCATTGCATGTCAACGTCCAAG........................................................................................................................................................................................ 24 0 20 4.75 95 95 0 0 0 0 0
..................................................................................................................................................TGGATTCCTCTGATTCTCTTGTATCGA.............................................................................. 27 0 1 3.00 3 0 3 0 0 0 0
.........................................................................TAGAGTGACAGACGATTACATGCTC......................................................................................................................................................... 25 0 1 3.00 3 0 3 0 0 0 0
................................................TTGCATGTCAACGTCCAAGAAAGATT................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................TATGACAGGTGTTTTCCAAAGAGCA.......................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................GATTGGGTGGAAATAAAAAGGATTCATT................................ 28 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................TCTTGTATCGAGCATCTATCTGGC................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...........................................AGTCATTGCATGTCAACGTC............................................................................................................................................................................................ 20 0 20 0.55 11 0 0 11 0 0 0
........................................................................TTAGAGAGACAGACGAGTACATGCT.......................................................................................................................................................... 25 2 2 0.50 1 0 0 0 1 0 0
.........................................GCAGTCATTGCATGTCAACGTC............................................................................................................................................................................................ 22 0 20 0.40 8 8 0 0 0 0 0
...........................................AGTCATTGCATGTCAACGTCC........................................................................................................................................................................................... 21 0 20 0.35 7 0 0 0 6 1 0
................................................TTGCATGTCAACGTCCAAGAAAGA................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................................................................................AATAGATTGGGTGGAAGTAAAAA......................................... 23 2 3 0.33 1 0 0 0 0 1 0
..........................................................................................ACATGCTCGAAAGGATTCACGACGC........................................................................................................................................ 25 0 3 0.33 1 0 1 0 0 0 0
................................................TTGCATGTCAACGTCCAAGAAC..................................................................................................................................................................................... 22 1 20 0.30 6 6 0 0 0 0 0
...................................................................................................................................................................................................................................GTGATATTGAACTTTTAGA..... 19 2 6 0.17 1 1 0 0 0 0 0
...........................................AGTCATTGCATGTCAACGTCCAAGAA...................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0
..........................................CAGTCATTGCATGTCAACGTCC........................................................................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0
.................TAACTGCATCGCCCCTTTAA...................................................................................................................................................................................................................... 20 1 14 0.14 2 2 0 0 0 0 0
...........GTGCAGTAACTGCATCGCCC............................................................................................................................................................................................................................ 20 0 14 0.14 2 2 0 0 0 0 0
.CCACTTGACGGTGCAGTAACT..................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
..........................................CAGTCATTGCATGTCAACGTC............................................................................................................................................................................................ 21 0 20 0.10 2 0 0 0 0 2 0
...........................................AGTCATTGCATGTCAACGTCCAAGAAC..................................................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0
.CCACTTGACGGTGCAGTAACTGC................................................................................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0 0
.........................TCGCCCCTTGAAAGATGCAGTCATTG........................................................................................................................................................................................................ 26 0 12 0.08 1 0 0 0 0 1 0
................................................................................................................CGCGAGAATATGACAGGTC........................................................................................................................ 19 3 12 0.08 1 1 0 0 0 0 0
............TGCAGTAACTGCATCGCCCCTTG........................................................................................................................................................................................................................ 23 0 13 0.08 1 1 0 0 0 0 0
.........CGGTGCAGTAACTGCATCGCCCC........................................................................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0
.................TAACTGCATCGCCCCTTGAAAG.................................................................................................................................................................................................................... 22 0 13 0.08 1 0 1 0 0 0 0
..............CAGTAACTGCATCGCCCCTTGAAAA.................................................................................................................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0 0
............TGCAGTAACTGCATCGCCCC........................................................................................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0 0
.........................TCGCCCCTTGAAAGATGC................................................................................................................................................................................................................ 18 0 14 0.07 1 1 0 0 0 0 0
...................ACTGCATCGCGCCATGAATG.................................................................................................................................................................................................................... 20 3 19 0.05 1 1 0 0 0 0 0
.CCACTTGACGGTGCAGTAAC...................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0
...........................................AGTCATTGCATGGCAACGTCCAAG........................................................................................................................................................................................ 24 1 20 0.05 1 0 0 0 1 0 0
...........................................AGTCATTGCATGTCAACGTCCTAG........................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
...........................................AGTCGTTGCATGTCAACGTCC........................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
....CTTGACGGTGCAGTAACTGCA.................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
..CACTTGACGGTGCAGTAACTGCA.................................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0 0
................................................TTGCATGTCAACGTCCAAGAA...................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
......TTACGGTGCAGTAACTGCATC................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 1
................................................TTGCATGTCAACGTCCAAGAAA..................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
........................................TGCAGTCATTGCATGTCAACGTCCAAG........................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
...............................CTTGAAAGATGCAGTCATTGC....................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0
...............................................ATTGCGTGTCAACGTCCAAGA....................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..........................................CAGTCATTGCATGTCGACGTC............................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0
GCCACTTGACGGTGCAGTAACTGC................................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...GCTTGACGGTGCAGTGACTG.................................................................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
....CTTGACGGTGCAGTAACTGC................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0
...........................................AGTCATTGCATGTCAAAGTCCA.......................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
................................................TTGCATGTCAACGTCCAGGAAA..................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..CACTTGACGGTGCAGTAACTGC................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...........................................AGTCATTGCATGTCAACGTCCAAGT....................................................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0
...........................................AGTCATTGCATGTCAACATCCAAG........................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
.............................................TCATTGCATGTCAACGTCCA.......................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0
......TTACGGTGCAGTGACTGCATC................................................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 0 0 0 1
....CTTGACGGTGCAGTAACTGCATCGC.............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
...........................................AGTCATTGCATGTCAACGTCCC.......................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CGGTGAACTGCCACGTCATTGACGTAGCGGGGAACTTTCTACGTCAGTAACGTACAGTTGCAGGTTCTTTCTAATCTCACTGTCTGCTAATGTACGAGCTTTCCTAAGTGCTGCGTTGTTATACTGTCCACAAAAGGTTTCTCGTTACCTAAGGAGACTAAGAGAACATAGCTCGTAGATAGACCGTTTTTCTAACCCACCTTTATTTTTCCTAAGTAACGGCTTTCGACAATAACTTGAAAATCTTTGTG
******************************************************************************.((((...((((.((...(((((((....(((..(((....((......))....)))..)))....)))).)))...)).))))...))))........************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 GSM343916
embryo
 SRR902011
testis
 M059
embryo
 V112
male body		 GSM444067
head
...........................CGGGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 26 0 12 3.67 44 32 10 0 2 0 0 0
.......................................TACGTCAGTAACGTACAGTTGCAGGTT......................................................................................................................................................................................... 27 0 20 2.05 41 0 41 0 0 0 0 0
..............................................................GGTTCTTTCTAATCTCACTGTCTGCT................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0
............................GGGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 25 0 12 1.42 17 15 0 0 1 1 0 0
.........GCCACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 24 0 13 1.23 16 6 0 9 0 1 0 0
.GGTGAACTGCCACGTCATT....................................................................................................................................................................................................................................... 19 0 20 1.00 20 0 20 0 0 0 0 0
.................................................................................................................................................TACCTAAGGAGACTAAGAGAACATAGCT.............................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................CTAACCCACCTTTATTTTTCCTAAGT.................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTTCCTAAGTAACGGCTTTCGACAAT.................. 26 0 1 1.00 1 1 0 0 0 0 0 0
........................................ACGTCAGTAACGTACAGTTGCAGGTT......................................................................................................................................................................................... 26 0 20 0.90 18 0 18 0 0 0 0 0
......................................CTACGTCAGTAACGTACAGTTGCAGGTT......................................................................................................................................................................................... 28 0 20 0.85 17 17 0 0 0 0 0 0
.............................GGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 24 0 12 0.67 8 5 0 0 3 0 0 0
...........................CGGGGAACTTTCTACGTCAGTAAC........................................................................................................................................................................................................ 24 0 12 0.67 8 0 3 0 5 0 0 0
...TGAACTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 22 0 20 0.60 12 12 0 0 0 0 0 0
................................................................................................AGCTTTCCTAAGTGCTGCGTTGTTAT................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
..............................GGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 23 0 12 0.50 6 6 0 0 0 0 0 0
..........CCACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 23 0 13 0.46 6 2 0 2 0 2 0 0
.GGTGACCTGCCACGTCATTGA..................................................................................................................................................................................................................................... 21 1 20 0.45 9 9 0 0 0 0 0 0
.........................AGCGGGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 28 0 12 0.42 5 3 2 0 0 0 0 0
..........................GCGGGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 27 0 12 0.42 5 4 1 0 0 0 0 0
..........CCACGTCATTGACGTAGCGGGGAA......................................................................................................................................................................................................................... 24 0 13 0.38 5 2 0 0 0 3 0 0
..GTGACCTGCCACGTCATTGAC.................................................................................................................................................................................................................................... 21 1 20 0.35 7 7 0 0 0 0 0 0
...........................................................................................GTACGAGCTTTCCTAAGTGCTGCGT....................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
...........................CGGGGAACTTTTTACGTCAGTAACGT...................................................................................................................................................................................................... 26 1 13 0.31 4 0 3 1 0 0 0 0
CGGTGAACTGCCACGTCATTGA..................................................................................................................................................................................................................................... 22 0 20 0.25 5 5 0 0 0 0 0 0
.GGTGAACTGCCACGTCAT........................................................................................................................................................................................................................................ 18 0 20 0.25 5 0 5 0 0 0 0 0
CGGTGAACTGCCACGTCATTGACG................................................................................................................................................................................................................................... 24 0 20 0.25 5 5 0 0 0 0 0 0
.........................................................................................................................................TGTCTCGTTACCTAAGGAGTCTAG.......................................................................................... 24 3 4 0.25 1 1 0 0 0 0 0 0
...........CACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 22 0 13 0.23 3 3 0 0 0 0 0 0
..............................GGAACTTTCTACGTCAGTAACGTACAGT................................................................................................................................................................................................. 28 0 10 0.20 2 2 0 0 0 0 0 0
CGGTGACCTGCCACGTCATTGA..................................................................................................................................................................................................................................... 22 1 20 0.20 4 4 0 0 0 0 0 0
....AAACTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 21 1 20 0.20 4 4 0 0 0 0 0 0
...........................CGGGGAACTTTCTACGTCAGTAACG....................................................................................................................................................................................................... 25 0 12 0.17 2 2 0 0 0 0 0 0
............................GGGGAACTTTCTACGTCAGTAAC........................................................................................................................................................................................................ 23 0 12 0.17 2 1 0 0 1 0 0 0
..........CCACGTCATTGACGTAGCGGGTA.......................................................................................................................................................................................................................... 23 1 13 0.15 2 0 0 0 0 2 0 0
........................................ACGTCAGTAACGTACAGTTGCAGGT.......................................................................................................................................................................................... 25 0 20 0.15 3 0 0 0 0 3 0 0
..........CCACGTCATTGACGTAGCGGG............................................................................................................................................................................................................................ 21 0 14 0.14 2 2 0 0 0 0 0 0
CGGTGACCTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 25 1 20 0.10 2 0 2 0 0 0 0 0
...........................................TCAGTAACGTACAGTTGCAGGTT......................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0
...........................CGGGGAACTTTCTACGTCAGTAACGTA..................................................................................................................................................................................................... 27 0 11 0.09 1 1 0 0 0 0 0 0
............................GGGGAACTTTCTACGTCAGTAACGTA..................................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0 0
..........................GCGGGGAACTTTCTACGTCAGTAACG....................................................................................................................................................................................................... 26 0 12 0.08 1 1 0 0 0 0 0 0
............................GGGGAACTTTCTACGTCAGTAACG....................................................................................................................................................................................................... 24 0 12 0.08 1 1 0 0 0 0 0 0
............................GGGGAACTTTCTACGTCAGT........................................................................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0 0
..........................GCGGGGAACTTTCCACGTCAGTAACGT...................................................................................................................................................................................................... 27 1 12 0.08 1 1 0 0 0 0 0 0
..........CCACGTCATTGACGTAGCGGGG........................................................................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0
............................GGGGAACTTACGACGTCAGTAACGT...................................................................................................................................................................................................... 25 2 13 0.08 1 0 0 0 1 0 0 0
...........................CGGGGAACTTTCTACGTCAGTAACTT...................................................................................................................................................................................................... 26 1 13 0.08 1 0 0 0 0 1 0 0
........TGCCACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 25 0 13 0.08 1 0 0 1 0 0 0 0
.......ATGCCACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 26 1 13 0.08 1 0 0 1 0 0 0 0
..........ACACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 23 1 13 0.08 1 0 0 1 0 0 0 0
............ACGTCATTGACGTAGCGGGGAAC........................................................................................................................................................................................................................ 23 0 13 0.08 1 0 0 0 1 0 0 0
...........CACGTCATTGACGTAGCGGGTA.......................................................................................................................................................................................................................... 22 1 13 0.08 1 0 0 0 0 1 0 0
............ACGTCATTGACGTAGCGGGGAA......................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0
...........................CGGGGAACTTTCTACGTCAGTAACGA...................................................................................................................................................................................................... 26 1 14 0.07 1 0 0 0 1 0 0 0
............................AAGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 25 2 14 0.07 1 1 0 0 0 0 0 0
.................ATTGACGTAGCGGGGAACTTTGT................................................................................................................................................................................................................... 23 1 14 0.07 1 0 0 0 0 1 0 0
............ACGTCATTGACGTAGCGGGG........................................................................................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0 0 0
..............GTCATTGACGTAGCGGGGAA......................................................................................................................................................................................................................... 20 0 14 0.07 1 0 0 1 0 0 0 0
............................CGGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 25 1 14 0.07 1 0 0 0 1 0 0 0
......................CGTAGCGGGGAACTTTCTAC................................................................................................................................................................................................................. 20 0 14 0.07 1 0 0 0 0 0 1 0
.............CGTCATTGACGTAGCGGGGAAATT...................................................................................................................................................................................................................... 24 1 14 0.07 1 0 0 1 0 0 0 0
.............CGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 20 0 14 0.07 1 0 0 1 0 0 0 0
...........AACGTCATTGACGTAGCGGGGAAC........................................................................................................................................................................................................................ 24 1 14 0.07 1 1 0 0 0 0 0 0
.............CGTCATTGACGTAGCGGGG........................................................................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0 0
...........................AGCGGAACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 26 2 14 0.07 1 1 0 0 0 0 0 0
.........AACACGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 24 2 15 0.07 1 1 0 0 0 0 0 0
.......................GTAGCGGGGGGCTTTCTACGT............................................................................................................................................................................................................... 21 2 15 0.07 1 0 0 0 0 0 0 1
.............TGTCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 20 1 15 0.07 1 1 0 0 0 0 0 0
..............ATCATTGACGTAGCGGGGA.......................................................................................................................................................................................................................... 19 1 16 0.06 1 0 0 1 0 0 0 0
...........AACGTCATTGACGTAGCGGGGAAATTC..................................................................................................................................................................................................................... 27 3 17 0.06 1 1 0 0 0 0 0 0
CGGTGACCTGCCACGTCA......................................................................................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0
....AAATTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0 0
.............................................AGTAACGTACAGTTGCAGGTTCGT...................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0
..AAAAACTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 23 3 20 0.05 1 1 0 0 0 0 0 0
CGGTGACCTGCCACGTCATTGACGTA................................................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0
CGGTGACCTGCCACGTCATTGAGG................................................................................................................................................................................................................................... 24 2 20 0.05 1 0 0 0 0 1 0 0
...AAAACTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 22 2 20 0.05 1 1 0 0 0 0 0 0
.....................................TCTACGTCAGTAACGTACAGTTGCAGGT.......................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0
.GGTGACCTGCCACGTCATTGAC.................................................................................................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0 0
.GGTGACCTGCCGCGTCATTGACGT.................................................................................................................................................................................................................................. 24 2 20 0.05 1 1 0 0 0 0 0 0
CGGTGACCTGCCACGTCATTGAC.................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0 0
............................................CAGTAACGTACAGTTGCAGGTTCTT...................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0
.................................ACTTTCTACGTCAGTAACGT...................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0
.......................................TACGTCAGTAACGTACAGTTGCAGGTTCT....................................................................................................................................................................................... 29 0 20 0.05 1 0 0 0 1 0 0 0
CGGTGACCTGACACGTCATTGACGT.................................................................................................................................................................................................................................. 25 2 20 0.05 1 0 0 0 0 1 0 0
CGGTGACCTGCCATGTCATTGAAGT.................................................................................................................................................................................................................................. 25 3 20 0.05 1 0 0 0 0 1 0 0
.......................................CACGTCAGTAACGTACAGTTGCAGGT.......................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0
GGGTGAACTGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0
......................................CTACGTCAGTAACGTACAGTTGCAGG........................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 1 0 0
....GAAATGCCACGTCATTGACGT.................................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_22:51766-52016 + dps_1873 GCCACTTGACGGTGCAGTAACTGCATCGCCCCTTGAAAGATGCAGTC--------ATTGCATGTCAACGTC----CAAGAAAGATTAGAGTGACAGACGATTACATGCTCGAAAGGATTCACGACGCAACAAT-ATGACAGGTGTTTTCCAAAGAGCAATGGATTCCTCTGAT-TCTCTTGTATCGAGCATCTATCTGGCAA-AAAGA-TTGGGT----GGAAATAAA--AAGGATTCATTGCCGA-AAGCTGTTATTGAACTTTTAGAAACAC
droPer2 scaffold_101:71168-71347 - A-----------------------------------------------------------------------------------TGAGAGAGACAGACGATTACATGCTCGAAAGGATTCACGACGCAACAAT-ATGACAGATGTTTTCCAAAGAGCAATGGATTGCTCTGAT-CCTCTTGTATCGAGCATCTATCTGACAA-AAAGA-TTGGGT----GGAAATAAA--AAGGATCCATTGCCGA-AAGCTGTTATTGAACTTTTAGAAACAC
droWil2 scf2_1100000012053:1688-1884 - AGC------------------------------------------------------------------TCCCAACAAATACTATAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTACACGGCAGAAAAAC-ATGGCAGATGTTTTCCACAGAGCAATGGATTCTTCAGAT-CCTCTAGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGGT----CAGCAAAAT--AAACTACCCCTCCCAT-CAGACGTAATCGAACTTTTGGAATCAC
droVir3 scaffold_12970:4849921-4849993 + A-----------------------------------------------------------------------------------TTA---------------------------------------------------------------------------------------------------AACATCGTTTTGTTAA-AAAAA-TGTTGT----AGACAGAAA--ACCGATTCGTTCGTAA-AGTCAGTTATTGA----------TGAT
droMoj3 scaffold_6289:7302-7492 + C------------------------------------------------------------------------AACAAATATTATAAGAGTGACAGGAGGCTACATGCTCGAAAGAGTACTCGGCAAAAAAAC-ATGGAAGACGTTTTCCACAGAGCAATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTACCTAGCAA-AAAGA-TTGGGC----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGGAATCAC
droGri2 scaffold_14853:1915080-1915115 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAA-AAATG-TTGGGC----GCAAAAAA---AAAGTATTT---------------------------------AT
droAna3 scaffold_12690:2311-2490 + A-----------------------------------------------------------------------------------TAAGATTTATAGGCGATCTCACGCAAGACAGAATTCGAGGCTGAACAAC-ATAATGGATGTGTTCCAAAGGTCCATGGACTCCTCTGAT-CCTTTATTGTCCAGCCTACATCTGAACA-AAAGA-TTAAAG----AAAAATAAA--AGTAAAAATCTACCAC-ACGAAGTTATTGAACTTTTGGAAATCC
droBip1 scf7180000391832:19001-19188 - C---------------------------------------------------------------------------AACAAGTACAAGAGTGAGAAAAGGTTACATGATCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTACCACAGAGCAATGGGTTCCTCAGAT-CTTCTTGTGTCGAGCATCTATCTAACAA-AAATA-TTGGGT----CAGAAAAAT--AAGCTACCCCTACCAG-CAGACGTTTTCGAACTTTTGAAATCAC
droKik1 scf7180000299170:14470-14649 + A-----------------------------------------------------------------------------------TAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCGATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGGT----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGGAATCAC
droFic1 scf7180000453688:1821-2008 - C---------------------------------------------------------------------------AAGTACTATAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTTCACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCCATGGATACCTCAGAT-CCTCTTGTTTCGAGCATCTACCTATCAA-AAAGA-TTGGGT----CAGCAAAAT--AAACTACCCCTTCCAC-CAGACGTAATCGAACTTTTGGAATCAC
droEle1 scf7180000490740:10143-10392 - G----------------TAACCGCATCCCCCCTACCTCTTGGCTGTCTAGGTGAGAACGCATCTGAGGCTCGAAACAAGATTTATAAAAATGATCGACGTTCGCATGCAAGGCAAAATAGTCGACTGAATACCAATGACAGATGTTTTTTGTAGAGCACTCGATTCGTCGGAT-CCATTTGTTTCCAGCATTTATATCAACG-ATAGA-CTACTT----GCCAACAAAAAATATAACAGTTATCCA-TAGAGGTTATTCACCTGTTAAGACAAC
droRho1 scf7180000770777:2134-2314 + A-----------------------------------------------------------------------------------TAAGAGTGACAGAAGGTTACATGCTCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCAATGGATTCCTCAGATTCCTCTTGTGTCAAGCATTTATTTAACAA-AAAGA-TTGGGT----CACCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGGAATCAC
droBia1 scf7180000301323:14719-14902 - A-----------------------------------------------------------------------------------TAAAAATGATAGACGTTCTCATGCAAGACAAAATAGTCGCTTAAACAAT-ATGACTGACGTTTTTTGTAGAGCACTTGATTCATCAGAT-CCGATGGTTTCCAGCATCCACAAAAAAGGAAAGA-GTACAT----CAAAACAAAAAACGCAGCAGTTACCCATTAGAAGTTATTGATCTTTTAACACCAC
droTak1 scf7180000414162:3318-3497 - A-----------------------------------------------------------------------------------TAAGAGTGACAGGAGGTTACATGCTCGACAGAGTTCACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCAATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGTT----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATACAACTTTTGGAATCAC
dm3 chrX:18450402-18450578 + A--------------------------------------------------------------------------------------AAGGGACCGATTATCACATGCAAGGAAAAATAGTCGGATCAATACG-ATGAGCGATATTTTCCACAGAGCTATTGATTCCTCGGAC-CCACTATTATCAACAATATGTTTAAAAG-AAAGA-GAGAGA----AAAAATAGG--AAAAAACCACTTCCGA-AGGCAGTAATAAGTCTTTTGGAAATAC
droSim2 2r:885577-885778 + T---------------------------------------------------------GCGTGTGAAGCCCGGAATAAGCTTTACAAAAGGGACCGACTATCACATGCAAGGAAAAATAGTCGGATCAATAGG-ATGAGTGATATTTTCCACGGAGCGATTGATTACTCGGAC-CCACTATTATCAACAATTTGTTTAAAAG-AAAGA-----GA----GAAAAAATA--AGAAAACCACTTCCGA-AGGCAGTAATAAGTCTTTTGGAAATAC
droSec2 scaffold_102:140941-141136 - AGC------------------------------------------------------------------GTGCAACAAACTTTACAAGAACGATAGAAAATCTCACGCAGGA-AATGTAGCCGACTAGCAAAC-ATTACAGATGTTTTCAATAGAGCAATGGATTCATCTGAT-CACTTGCTTTCAAGTCTTTGTTTAAGAG-ATCGAAGTAAGT----TTGGAAA-A--AAGAAACTCCTTCCAA-AAGATGTAATCGTTATTCTTCAAAATC
droYak3 v2_chrUn_008:161547-161726 - A-----------------------------------------------------------------------------------TAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCAATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGGC----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGAAATCAC
droEre2 scaffold_4895:271437-271630 + A-------------------------------------------------------------------------ATAAAAATTACAAAAGGGATCGACTATCACATGCCAGGAAAAATAGTCGAATTAATACG-ATGAGTGATATTTTCCAGAGAGCGATTGCTTCCTCGGAC-CCACTATTATCAAAAATTTGTTAAAAAA-AAAGA-TAGAGAGAGAAAAAATAAG--AAAAAACCACTTCCGA-AGGCAGTAATAAGTCTTTTGGAAATGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCCACTTGACGGTGCAGTAACTGCATCGCCCCTTGAAAGATGCAGTC--------ATTGCATGTCAACGTC----CAAGAAAGATTAGAGTGACAGACGATTACATGCTCGAAAGGATTCACGACGCAACAAT-ATGACAGGTGTTTTCCAAAGAGCAATGGATTCCTCTGAT-TCTCTTGTATCGAGCATCTATCTGGCAA-AAAGA-TTGGGT----GGAAATAAA--AAGGATTCATTGCCGA-AAGCTGTTATTGAACTTTTAGAAACACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................AGTC--------ATTGCATGTCAACGTC----CAAG...................................................................................................................................................................................................24204.759509500000000
...............................................................................................................................................................TGGATTCCTCTGAT-TCTCTTGTATCGA.......................................................................................2713.0030000000300
.....................................................................................TAGAGTGACAGACGATTACATGCTC....................................................................................................................................................................2513.0030000000300
........................................................TTGCATGTCAACGTC----CAAGAAAGATT............................................................................................................................................................................................2612.0020200000000
....................................................................................................................................T-ATGACAGGTGTTTTCCAAAGAGCA....................................................................................................................2511.0010100000000
..............................................................................................................................................................................................................GA-TTGGGT----GGAAATAAA--AAGGATTCATT.................................2811.0010010000000
................................................................................................................................................................................TCTTGTATCGAGCATCTATCTGGC..........................................................................2411.0010100000000
...........................................AGTC--------ATTGCATGTCAACGTC----.......................................................................................................................................................................................................20200.551100110000000
.........................................GCAGTC--------ATTGCATGTCAACGTC----.......................................................................................................................................................................................................22200.4080800000000
...........................................AGTC--------ATTGCATGTCAACGTC----C......................................................................................................................................................................................................21200.3570000601000
........................................................TTGCATGTCAACGTC----CAAGAAAGA..............................................................................................................................................................................................2430.3310100000000
......................................................................................................ACATGCTCGAAAGGATTCACGACGC...................................................................................................................................................2530.3310000000100
........................................................TTGCATGTCAACGTC----CAAGAAC................................................................................................................................................................................................22200.3060600000000
...........................................AGTC--------ATTGCATGTCAACGTC----CAAGAA.................................................................................................................................................................................................26200.1530300000000
..........................................CAGTC--------ATTGCATGTCAACGTC----C......................................................................................................................................................................................................22200.1530300000000
...........GTGCAGTAACTGCATCGCCC...................................................................................................................................................................................................................................................20140.1420200000000
.CCACTTGACGGTGCAGTAACT............................................................................................................................................................................................................................................................21200.1020200000000
..........................................CAGTC--------ATTGCATGTCAACGTC----.......................................................................................................................................................................................................21200.1020000002000
...........................................AGTC--------ATTGCATGTCAACGTC----CAAGAAC................................................................................................................................................................................................27200.1020200000000
.CCACTTGACGGTGCAGTAACTGC..........................................................................................................................................................................................................................................................23200.1020000000200
.........................TCGCCCCTTGAAAGATGCAGTC--------ATTG.......................................................................................................................................................................................................................26120.0810000001000
............TGCAGTAACTGCATCGCCCCTTG...............................................................................................................................................................................................................................................23130.0810100000000
.........CGGTGCAGTAACTGCATCGCCCC..................................................................................................................................................................................................................................................23130.0810100000000
.................TAACTGCATCGCCCCTTGAAAG...........................................................................................................................................................................................................................................22130.0810000000100
..............CAGTAACTGCATCGCCCCTTGAAAA...........................................................................................................................................................................................................................................25140.0710100000000
............TGCAGTAACTGCATCGCCCC..................................................................................................................................................................................................................................................20140.0710100000000
.........................TCGCCCCTTGAAAGATGC.......................................................................................................................................................................................................................................18140.0710100000000
.CCACTTGACGGTGCAGTAAC.............................................................................................................................................................................................................................................................20200.0510000100000
....CTTGACGGTGCAGTAACTGCA.........................................................................................................................................................................................................................................................21200.0510100000000
..CACTTGACGGTGCAGTAACTGCA.........................................................................................................................................................................................................................................................23200.0510010000000
........................................................TTGCATGTCAACGTC----CAAGAA.................................................................................................................................................................................................21200.0510100000000
........................................................TTGCATGTCAACGTC----CAAGAAA................................................................................................................................................................................................22200.0510100000000
........................................TGCAGTC--------ATTGCATGTCAACGTC----CAAG...................................................................................................................................................................................................27200.0510100000000
...............................CTTGAAAGATGCAGTC--------ATTGC......................................................................................................................................................................................................................21200.0510000001000
GCCACTTGACGGTGCAGTAACTGC..........................................................................................................................................................................................................................................................24200.0510100000000
....CTTGACGGTGCAGTAACTGC..........................................................................................................................................................................................................................................................20200.0510000100000
..CACTTGACGGTGCAGTAACTGC..........................................................................................................................................................................................................................................................22200.0510100000000
...........................................AGTC--------ATTGCATGTCAACGTC----CAAGT..................................................................................................................................................................................................25200.0510010000000
.............................................TC--------ATTGCATGTCAACGTC----CA.....................................................................................................................................................................................................20200.0510000100000
....CTTGACGGTGCAGTAACTGCATCGC.....................................................................................................................................................................................................................................................25200.0510100000000
...........................................AGTC--------ATTGCATGTCAACGTC----CC.....................................................................................................................................................................................................22200.0510100000000
droPer2
A-----------------------------------------------------------------------------------TGAGAGAGACAGACGATTACATGCTCGAAAGGATTCACGACGCAACAAT-ATGACAGATGTTTTCCAAAGAGCAATGGATTGCTCTGAT-CCTCTTGTATCGAGCATCTATCTGACAA-AAAGA-TTGGGT----GGAAATAAA--AAGGATCCATTGCCGA-AAGCTGTTATTGAACTTTTAGAAACACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................CTATCTGACAA-AAAGA-TTGGGT----GG.....................................................2430.672020000
.....................................................................................................................................................................................TATCGAGCATCTATCTGACA.........................................................................2030.331010000
droWil2
AGC------------------------------------------------------------------TCCCAACAAATACTATAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTACACGGCAGAAAAAC-ATGGCAGATGTTTTCCACAGAGCAATGGATTCTTCAGAT-CCTCTAGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGGT----CAGCAAAAT--AAACTACCCCTCCCAT-CAGACGTAATCGAACTTTTGGAATCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................TACTATAAGAGTGACAGGAGGTTACA.........................................................................................................................................................................2664.0024000240
..................................................................................TATAAGAGTGACAGGAGGTTACATGC......................................................................................................................................................................2662.6716000160
...............................................................................TACTATAAGAGTGACAGGAGGTTAC..........................................................................................................................................................................2561.50900090
..........................................................................................................................................CAGATGTTTTCCACAGAGCAATGGAT..............................................................................................................2681.13900090
..........................................................................................TGACAGGAGGTTACATGCTCGAAAGAG.............................................................................................................................................................2771.00700070
..........................................................................ACAAATACTATAAGAGTGACAGGA................................................................................................................................................................................2470.71505000
............................................................................AAATACTATAAGAGTGACAGGAGG..............................................................................................................................................................................2460.50303000
...................................................................................................................................AC-ATGGCAGATGTTTTCCACAGAGCA....................................................................................................................2660.33200020
..................................................................................................................................................................ATTCTTCAGAT-CCTCTAGTGTCGAGC.....................................................................................2690.33301020
....................................................................................TAAGAGTGACAGGAGGTTACATGC......................................................................................................................................................................2460.33200020
...................................................................................................................................................................................................................................T--AAACTACCCCTCCCAT-CAGACGTAA..................2660.33201010
............................................................................................................................................................................T-CCTCTAGTGTCGAGCATCTATCTAACA.........................................................................2890.33300030
.......................................................................................................................CACGGCAGAAAAAC-ATGGCAGATGTTT...............................................................................................................................2760.33200020
..................................................................................TATAAGAGTGACAGGAGGTTACA.........................................................................................................................................................................2360.33200020
.............................................................................AATACTATAAGAGTGACAGGAGG..............................................................................................................................................................................2360.33202000
..........................................................................................................................................................................................................................................TACCCCTCCCAT-CAGACGTAATCGAAC............2760.33200020
................................................................................................................................................................................................................................AAAT--AAACTACCCCTCCCAT-CAGACG.....................2660.33201010
.....................................................................................................................................................................................TGTCGAGCATCTATCTAACAA-AAAGA-T................................................................2780.25201010
................................................................................................................................................................................TCTAGTGTCGAGCATCTATCTAACAA-AA.....................................................................2880.25200020
....................................................................................................................................................................................................TAACAA-AAAGA-TTGGGT----CAGCAAAA...............................................2590.22200020
....................................................................................................................................................................TCTTCAGAT-CCTCTAGTGTCGAGCA....................................................................................2590.22200020
........................................................................................AGTGACAGGAGGTTACATGCTCGAAAG...............................................................................................................................................................2760.17101000
...............................................................................TACTATAAGAGTGACAGGAGGTTA...........................................................................................................................................................................2460.17100010
.................................................................................................................................................................................................................................AAT--AAACTACCCCTCCCAT-CAGA.......................2360.17101000
.........................................................................................................................CGGCAGAAAAAC-ATGGCAGATGTTTAA.............................................................................................................................2760.17100010
....................................................................................TAAGAGTGACAGGAGGTTACATGCTCGA..................................................................................................................................................................2860.17101000
.................................................................................CTATAAGAGTGACAGGAGGTTACA.........................................................................................................................................................................2460.17100010
......................................................................................................................................................................................................................................AAACTACCCCTCCCAT-CAGACGTAA..................2560.17101000
....................................................................................................................................C-ATGGCAGATGTTTTCCACAGAGCAA...................................................................................................................2660.17100010
...........................................................................CAAATACTATAAGAGTGACAGGAGG..............................................................................................................................................................................2560.17101000
............................................................................AAATACTATAAGAGTGACAGGAGGT.............................................................................................................................................................................2560.17100010
.............................................................................AATACTATAAGAGTGACAGGAGGTT............................................................................................................................................................................2560.17101000
...........................................................................CAAATACTATAAGAGTGACAGGAGGG.............................................................................................................................................................................2660.17100010
..................................................................................TATAAGAGTGACAGGAGGTTACATGCA.....................................................................................................................................................................2760.17100010
.......................................................................................................................CACGGCAGAAAAAC-ATGGCAGATGT.................................................................................................................................2560.17101000
....................................................................................TAAGAGTGACAGGAGGTTACA.........................................................................................................................................................................2160.17101000
.........................................................................................................................................................................................................................................CTACCCCTCCCAT-CAGACGTAATCGAACT...........2960.17100010
...........................................................................................................................................................................................................................CAGCAAAAT--AAACTACCCCTCCCAT-...........................2560.17101000
.........................................................................................................................CGGCAGAAAAAC-ATGGCAGATGT.................................................................................................................................2360.17100010
.......................................................................................................................CACGGCAGAAAAAC-ATGGCAGA....................................................................................................................................2260.17101000
..........................................................................................................................................................................................................................................TACCCCTCCCAT-CAGACGTAATCGAACT...........2860.17100010
...................................................................................................................................................................................................................................T--AAACTACCCCTCCCAT-CAGACGTAAT.................2760.17100010
............................................................................................................................................................................................................................AGCAAAAT--AAACTACCCCTCCCA.............................2360.17100010
..........................................................................ACAAATACTATAAGAGTGACAGGAGG..............................................................................................................................................................................2660.17101000
...........................................................................CAAATACTATAAGAGTGACAGGAGGT.............................................................................................................................................................................2660.17100010
................................................................................................................................................................................................................................AAAT--AAACTACCCCTCCCAT-CAGA.......................2460.17101000
............................................................................AAATACTATAAGAGTGACAGG.................................................................................................................................................................................2170.14101000
............................................................................AAATACTATAAGAGTGACAGGAG...............................................................................................................................................................................2370.14101000
............................................................................AAATACTATAAGAGTGACAGGA................................................................................................................................................................................2270.14101000
..........................................................................................................................................CAGATGTTTTCCACAGAGCAATG.................................................................................................................2380.13100010
............................................................................................................................................GATGTTTTCCACAGAGCAATGGATAA............................................................................................................2680.13100010
..................................................................................................................................................................ATTCTTCAGAT-CCTCTAGTGTCG........................................................................................2390.11101000
................................................................................................................................................................................TCTAGTGTCGAGCATCTATCT.............................................................................2190.11100010
...................................................................................................................................................................TTCTTCAGAT-CCTCTAGTGTC.........................................................................................2190.11100010
..................................................................................................................................................TTCCACAGAGCAATGGATTCTTCAGAT-C...................................................................................................2890.11100010
...........................................................................................................................................................................AT-CCTCTAGTGTCGAGCAT...................................................................................1990.11101000
...............................................................................................................................................GTTTTCCACAGAGCAATGGATT.............................................................................................................2290.11100010
...................................................................................................................................................................................................................................................CAT-CAGACGTAATCGAACTTTTGGAA....2690.11100010
...................................................................................................................................................TCCACAGAGCAATGGATTCTTCAGAT-C...................................................................................................2790.11100010
...............................................................................................................................................................TGGATTCTTCAGAT-CCTCTAGTGTCG........................................................................................2690.11101000
...............................................................................................................................................................................................CTATCTAACAA-AAAGA-TTGGGT----CAG....................................................2590.11101000
....................................................................................................................................................................TCTTCAGAT-CCTCTAGTGTCGAGCATT..................................................................................2790.11100010
..................................................................................................................................................................ATTCTTCAGAT-CCTCTAGTGT..........................................................................................2190.11100010
.......................................................................................................................................................................................................................................................CAGACGTAATCGAACTTTTGGAATCAC2790.11101000
...................................................................................................................................................................................................CTAACAA-AAAGA-TTGGGT----CA.....................................................2090.11101000
....................................................................................................................................................CCACAGAGCAATGGATTCTTCAGA......................................................................................................2490.11101000
............................................................................................................................................................................T-CCTCTAGTGTCGAGCATCTATCTAAC..........................................................................2790.11100010
................................................................................................................................................................................................TATCTAACAA-AAAGA-TTGGGT----CA.....................................................2390.11101000
..................................................................................................................................................................ATTCTTCAGAT-CCTCTAGTGTCGAGCA....................................................................................2790.11101000
.................................................................................................................................................................................................ATCTAACAA-AAAGA-TTGGGT----CAGC...................................................2490.11101000
.......................................................................................................................................................CAGAGCAATGGATTCTTCAGA......................................................................................................2190.11101000
...............................................................................................................................................................................................CTATCTAACAA-AAAGA-TTGGGT----CAGC...................................................2690.11100010
...................................................................................................................................................TCCACAGAGCAATGGATTCTTCAGA......................................................................................................2590.11100010
.................................................................................................................................................TTTCCACAGAGCAATGGATTCTTCAGA......................................................................................................2790.11100010
........................................................................................................................................................................................................AA-AAAGA-TTGGGT----CAGCAAAAT--AAAC........................................2690.11100010
droVir3
A-----------------------------------------------------------------------------------TTA---------------------------------------------------------------------------------------------------AACATCGTTTTGTTAA-AAAAA-TGTTGT----AGACAGAAA--ACCGATTCGTTCGTAA-AGTCAGTTATTGA----------TGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................TTCGTTCGTAA-AGTCAGTTATTGA----------TGA.2711.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................TTCGTTCGTAA-AGTCAGTTATTGA----------TG..2611.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................CAGAAA--ACCGATTCGTTCG...............................19180.061000000000000000000000001000000000000000000000000000000000000000
droMoj3
C------------------------------------------------------------------------AACAAATATTATAAGAGTGACAGGAGGCTACATGCTCGAAAGAGTACTCGGCAAAAAAAC-ATGGAAGACGTTTTCCACAGAGCAATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTACCTAGCAA-AAAGA-TTGGGC----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGGAATCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----C......................................................2373.43245000190
.....................................................................................AAGAGTGACAGGAGGCTACATGC......................................................................................................................................................................2371.7112610032
...................................................................................ATAAGAGTGACAGGAGGCTACATGC......................................................................................................................................................................2571.4310300025
.........................................................................................................................................................GAGCAATGGATTCCTCAGAT-CCTCT...............................................................................................2571.299900000
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----CAGC...................................................2671.299500040
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----.......................................................2271.007510010
.....................................................................................AAGAGTGACAGGAGGCTACATG.......................................................................................................................................................................2271.007700000
.........................................................................................................................................................GAGCAATGGATTCCTCAGAT-CC..................................................................................................2270.866300030
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----CAG....................................................2570.715500000
.........................................................................................................................................................GAGCAATGGATTCCTCAGAT-CCTC................................................................................................2470.574300010
...................................................................................ATAAGAGTGACAGGAGGCTACATG.......................................................................................................................................................................2470.433300000
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----CAGCA..................................................2770.433300000
.........................................................................................................................................................GAGCAATGGATTCCTCAGAT-CCTCTTG.............................................................................................2770.433300000
........................................................................................................................TCGGCAAAAAAAC-ATGGAAGACGT.................................................................................................................................2470.292200000
...........................................................................................................................................................................................................................................................CGTAATCGAACTTTTGGAATCAC2370.292200000
.....................................................................................AAGAGTGACAGGAGGCTACATGCTC....................................................................................................................................................................2570.292000020
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----CA.....................................................2470.292200000
..........................................................................................................................................................................................................................................................ACGTAATCGAACTTTTGGAATCA.2370.292200000
..........................................................................................................................................................................................................................................................ACGTAATCGAACTTTTGGAATCAC2470.292100001
...................................................................................ATAAGAGTGACAGGAGGCTACA.........................................................................................................................................................................2270.292200000
....................................................................................................................................................................................GTGTCGAGCATCTACCTAGCAA-AAAG...................................................................2670.141100000
...................................................................................................................................................................................................CTAGCAA-AAAGA-TTGGGC----CAG....................................................2170.141100000
............................................................................AAATATTATAAGAGTGACAGGA................................................................................................................................................................................2270.141000010
.....................................................................................AAGAGTGACAGGAGGCTACATGCTCG...................................................................................................................................................................2670.141100000
.....................................................................................AAGAGTGACAGGAGGCTACATGCTCGA..................................................................................................................................................................2770.141100000
............................................................................................................................................................................T-CCTCTTGTGTCGAGCATCTACCT.............................................................................2470.141100000
.................................................................................................................................................................................................................................AAT--AAACTACCCCTACCAG-C..........................2070.141100000
............................................................................................................................................................................................CATCTACCTAGCAA-AAAGA-TTGGGC----C......................................................2670.141000010
...........................................................................................................................................................................................................................................................CGTAATCGAACTTTTGGAATCA.2270.141100000
.....................................................................................AAGAGTGACAGGAGGCTACAT........................................................................................................................................................................2170.141100000
.....................................................................................AAGAGTGACAGGAGGCTACATGCTCTTT.................................................................................................................................................................2870.141000010
.....................................................................................AAGAGTGACAGGAGGCTACA.........................................................................................................................................................................2070.141000010
......................................................................................AGAGTGACAGGAGGCTACATGCTT....................................................................................................................................................................2470.141100000
...................................................................................................................................................TCCACAGAGCAATGGATTCCTCAGAT-CC..................................................................................................2870.141100000
........................................................................................................................................................................................CGAGCATCTACCTAGCAA-AAAGA-TTGG.............................................................2770.141100000
.................................................................................................................................................................................................................................AAT--AAACTACCCCTACCAG-CAGACGT....................2670.141100000
.....................................................................................AAGAGTGACAGGAGGCTACATGCTA....................................................................................................................................................................2570.141000001
.....................................................................................AAGAGTGACAGGAGGCTACATGCTT....................................................................................................................................................................2570.141100000
...........................................................................................................................................................................................................................................................CGTAATCGAACTTTTGGAATC..2170.141100000
......................................................................................AGAGTGACAGGAGGCTACA.........................................................................................................................................................................1970.141100000
...............................................................................................................................................................................................CTACCTAGCAA-AAAGA-TTGGGC----CAGCAA.................................................2870.141100000
....................................................................................................................................................................................................................................................AG-CAGACGTAATCGAACTTTTGGA.....2470.141100000
.................................................................................................................................................................................................................................AAT--AAACTACCCCTACCAG-CAGACG.....................2570.141100000
..................................................................................................................................AAC-ATGGAAGACGTTTTCCACAGAGCA....................................................................................................................2770.141100000
.......................................................................................................................................................................................TCGAGCATCTACCTAGCAA-AAAGA-TT...............................................................2670.141100000
.....................................................................................................TACATGCTCGAAAGAGTACTCGGCA....................................................................................................................................................2570.141100000
.........................................................................................GTGACAGGAGGCTACATGCTCGA..................................................................................................................................................................2370.141100000
..........................................................................................................GCTCGAAAGAGTACTCGGCAA...................................................................................................................................................2170.141100000
...................................................................................ATAAGAGTGACAGGAGGCTACACC.......................................................................................................................................................................2470.141000001
.......................................................................................................................................................CAGAGCAATGGATTCCTCAGAT-C...................................................................................................2370.141100000
...................................................................................ATAAGAGTGACAGGAGGCTACAT........................................................................................................................................................................2370.141100000
..........................................................................................................................GGCAAAAAAAC-ATGGAAGACGTT................................................................................................................................2370.141000010
.....................................................................................AAGAGTGACAGGAGGCTACATGCT.....................................................................................................................................................................2470.141100000
....................................................................................TAAGAGTGACAGGAGGCTACATGCTC....................................................................................................................................................................2670.141100000
........................................................................................................................TCGGCAAAAAAAC-ATGGAAGACGTTT...............................................................................................................................2670.141000010
......................................................................................AGAGTGACAGGAGGCTACAT........................................................................................................................................................................2070.141100000
.........................................................................................................................CGGCAAAAAAAC-ATGGAAGACGTTTT..............................................................................................................................2670.141100000
.........................................................................................................................................................GAGCAATGGATTCCTCAGAT-CCT.................................................................................................2370.141100000
.............................................................................................................................................................................................................................GCAAAAT--AAACTACCCCTACCAG-CAGG.......................2770.141100000
...................................................................................ATAAGAGTGACAGGAGGCTAC..........................................................................................................................................................................2170.141100000
....................................................................................TAAGAGTGACAGGAGGCTACATGCTCGA..................................................................................................................................................................2870.141100000
...........................................................................................................................GCAAAAAAAC-ATGGAAGACGTTTT..............................................................................................................................2470.141100000
..............................................................................ATATTATAAGAGTGACAGGAGGC.............................................................................................................................................................................2370.141010000
............................................................................AAATATTATAAGAGTGACAGGAGGCT............................................................................................................................................................................2670.141100000
...........................................................................................................................................................GCAATGGATTCCTCAGAT-CCTCT...............................................................................................2390.111100000
....................................................................................................................................................................TCCTCAGAT-CCTCTTGTGTCGAGCA....................................................................................2590.111000001
..........................................................................................................................................................AGCAATGGATTCCTCAGAT-CCTC................................................................................................2390.111100000
..........................................................................................................................................................AGCAATGGATTCCTCAGAT-CCTCTTC.............................................................................................2690.111100000
droGri2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAA-AAATG-TTGGGC----GCAAAAAA---AAAGTATTT---------------------------------ATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
A-----------------------------------------------------------------------------------TAAGATTTATAGGCGATCTCACGCAAGACAGAATTCGAGGCTGAACAAC-ATAATGGATGTGTTCCAAAGGTCCATGGACTCCTCTGAT-CCTTTATTGTCCAGCCTACATCTGAACA-AAAGA-TTAAAG----AAAAATAAA--AGTAAAAATCTACCAC-ACGAAGTTATTGAACTTTTGGAAATCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................TGAT-CCTTTATTGTCCAGCCTACATC..............................................................................26101.20121110000
..........................................................................................................GCAAGACAGAATTCGAGGCTGAAC................................................................................................................................................2481.139450000
..........................................................................................................................................TGGATGTGTTCCAAAGGTCCATGGAC..............................................................................................................26100.909540000
...........................................................................................................CAAGACAGAATTCGAGGCTGAAC................................................................................................................................................2380.887340000
....................................................................................................................................................................TCCTCTGAT-CCTTTATTGTCCAGCC....................................................................................25100.808080000
..........................................................................................................GCAAGACAGAATTCGAGGCTGAA.................................................................................................................................................2380.635410000
..........................................................................................................GCAAGACAGAATTCGAGGCTGAACAAC-............................................................................................................................................2780.635050000
.................................................................................................................................................................................................................................................ACCAC-ACGAAGTTATTGAACTTTT........24110.556060000
..........................................................................................................GCAAGACAGAATTCGAGGCTGAACAA..............................................................................................................................................2680.504310000
..........................................................................................................GCAAGACAGAATTCGAGGCTGAACA...............................................................................................................................................2580.504310000
...................................................................................................................................................TCCAAAGGTCCATGGACTCCTCTGA......................................................................................................25100.404310000
....................................................................................................................................................................TCCTCTGAT-CCTTTATTGTCCAGCCTA..................................................................................27100.404130000
..............................................................................................................GACAGAATTCGAGGCTGAACAAC-A...........................................................................................................................................2480.383300000
..........................................................................................................GCAAGACAGAATTCGAGGCTGAACAAC-A...........................................................................................................................................2880.383210000
..........................................................................................................GCAAGACAGAATTCGAGGC.....................................................................................................................................................1980.383030000
............................................................................................................AAGACAGAATTCGAGGCTGAAC................................................................................................................................................2280.383120000
..........................................................................................................GCAAGACAGAATTCGAGGCTGA..................................................................................................................................................2280.383012000
.........................................................................................................................................................................TGAT-CCTTTATTGTCCAGCCTAC.................................................................................23100.303210000
.........................................................................................................................................ATGGATGTGTTCCAAAGGTCCATGGAC..............................................................................................................27100.303300000
............................................................................................................................................................................T-CCTTTATTGTCCAGCCTACATCTGAA..........................................................................27100.303300000
........................................................................................................................................AATGGATGTGTTCCAAAGGTCC....................................................................................................................22100.303120000
..........................................................................................................................................TGGATGTGTTCCAAAGGTCCATGG................................................................................................................24100.303030000
................................................................................................................................................................................................................................................TACCAC-ACGAAGTTATTGAACTTTTG.......26110.273030000
.........................................................................................................................AGGCTGAACAAC-ATAATGGATGT.................................................................................................................................2380.252020000
............................................................................................................AAGACAGAATTCGAGGCTGAACA...............................................................................................................................................2380.252200000
......................................................................................................TCACGCAAGACAGAATTCGAGG......................................................................................................................................................2280.252020000
.......................................................................................................................CGAGGCTGAACAAC-ATAATGGA....................................................................................................................................2280.252110000
....................................................................................................TCTCACGCAAGACAGAATTCGAGGCT....................................................................................................................................................2680.252110000
...........................................................................................................CAAGACAGAATTCGAGGCTGAACA...............................................................................................................................................2480.252100010
..........................................................................................................GCAAGACAGAATTCGAGGCTGAACATT-............................................................................................................................................2780.252110000
..............................................................................................................................................TGTGTTCCAAAGGTCCATGGACTC............................................................................................................24100.202020000
....................................................................................................................................................................TCCTCTGAT-CCTTTATTGTCCAGCCTAC.................................................................................28100.202110000
.........................................................................................................................................................GGTCCATGGACTCCTCTGAT-CCT.................................................................................................23100.202020000
............................................................................................................................................................................T-CCTTTATTGTCCAGCCTACATC..............................................................................23100.202020000
.......................................................................................................................................................................TCTGAT-CCTTTATTGTCCAGCCTACATC..............................................................................28100.202020000
....................................................................................................................................C-ATAATGGATGTGTTCCAAAGGTCCATG.................................................................................................................28100.202200000
........................................................................................................................................................................CTGAT-CCTTTATTGTCCAGCCTACATC..............................................................................27100.202020000
....................................................................................................................................................................TCCTCTGAT-CCTTTATTGTCCAGCCT...................................................................................26100.202020000
...................................................................................................................................................TCCAAAGGTCCATGGACTCCTCTGAT-CCT.................................................................................................29100.202110000
................................................................................................................................................................................................................................................TACCAC-ACGAAGTTATTGAACTTTT........25110.182020000
................................................................................................................................................................................................................................................TACCAC-ACGAAGTTATTGAACTTTTGG......27110.182020000
...........................................................................................................CAAGACAGAATTCGAGGCTGAACAAC-............................................................................................................................................2680.131010000
............................................................................................................AAGACAGAATTCGAGGCTG...................................................................................................................................................1980.131100000
...........................................................................................................CAAGACAGAATTCGAGGCTGAACAAC-A...........................................................................................................................................2780.131100000
............................................................................................................AAGACAGAATTCGAGGCTGAACAAC-ATA.........................................................................................................................................2880.131100000
...........................................................................................................CAAGACAGAATTCGAGGCTGAACAA..............................................................................................................................................2580.131100000
......................................................................................................TCACGCAAGACAGAATTCGAGGCT....................................................................................................................................................2480.131100000
.......................................................................................................CACGCAAGACAGAATTCGAGGC.....................................................................................................................................................2280.131010000
.....................................................................................................................TTCGAGGCTGAACAAC-ATAATGGATG..................................................................................................................................2680.131100000
.......................................................................................................CACGCAAGACAGAATTCGAGG......................................................................................................................................................2180.131010000
.........................................................................................................CGCAAGACAGAATTCGAGGCTGA..................................................................................................................................................2380.131100000
............................................................................................................AAGACAGAATTCGAGGCTGAACAAC-............................................................................................................................................2580.131100000
.....................................................................................................................TTCGAGGCTGAACAAC-ATAATGGATGC.................................................................................................................................2780.131010000
..................................................................................................................GAATTCGAGGCTGAACAAC-ATAATGGA....................................................................................................................................2780.131010000
..........................................................................................................GCAAGACAGAATTCGAGGCTG...................................................................................................................................................2180.131100000
..........................................................................................................GCAAGACAGAATTCGAGGCTGATTT...............................................................................................................................................2580.131010000
.....................................................................................................................TTCGAGGCTGAACAAC-ATAATGGATGT.................................................................................................................................2780.131010000
.........................................................................................................................AGGCTGAACAAC-ATAATGGATG..................................................................................................................................2280.131100000
..............................................................................................................GACAGAATTCGAGGCTGAACAAC-............................................................................................................................................2380.131010000
..........................................................................................................GCAAGACAGAATTCGAGGCTGG..................................................................................................................................................2280.131010000
......................................................................................................TCACGCAAGACAGAATTCGAGGCTGA..................................................................................................................................................2680.131100000
...........................................................................................................CAAGACAGAATTCGAGGCTGAACC...............................................................................................................................................2480.131010000
.....................................................................................................CTCACGCAAGACAGAATTCGAGG......................................................................................................................................................2380.131010000
......................................................................................................................TCGAGGCTGAACAAC-ATAATGG.....................................................................................................................................2280.131010000
...........................................................................................................CAAGACAGAATTCGAGGCTGA..................................................................................................................................................2180.131100000
...........................................................................................................CAAGACAGAATTCGAGGCTG...................................................................................................................................................2080.131100000
..........................................................................................................GCAAGACAGAATTCGAGG......................................................................................................................................................1880.131001000
............................................................................................................AAGACAGAATTCGAGGCTGAACAAC-A...........................................................................................................................................2680.131100000
.................................................................................................................................CAAC-ATAATGGATGTGTTCCAAAGGT......................................................................................................................26100.101010000
....................................................................................................................................................................TCCTCTGAT-CCTTTATTGTCCAGCCTACA................................................................................29100.101100000
............................................................................................................................................................................T-CCTTTATTGTCCAGCCTACATCTG............................................................................25100.101100000
..............................................................................................................................................TGTGTTCCAAAGGTCCATGGA...............................................................................................................21100.101100000
..................................................................................................................................................TTCCAAAGGTCCATGGACTCCTC.........................................................................................................23100.101010000
.................................................................................................................................................................GACTCCTCTGAT-CCTTTATTGTCCAGCC....................................................................................28100.101010000
............................................................................................ATAGGCGATCTCACGCAAGACAGAATT...........................................................................................................................................................27100.101100000
...................................................................................................................................................TCCAAAGGTCCATGGACTCCTC.........................................................................................................22100.101001000
..............................................................................................................................................TGTGTTCCAAAGGTCCATGGACTCCT..........................................................................................................26100.101010000
....................................................................................................................................................CCAAAGGTCCATGGACTCCTCTGAT-CC..................................................................................................27100.101100000
.........................................................................................................................................................................TGAT-CCTTTATTGTCCAGCCTACAC...............................................................................25100.101010000
.................................................................................................................................................................................TTATTGTCCAGCCTACATCTGAA..........................................................................23100.101010000
.................................................................................................................................................GTTCCAAAGGTCCATGGACTCCT..........................................................................................................23100.101010000
.......................................................................................................................................................................TCTGAT-CCTTTATTGTCCAGCCTACAC...............................................................................27100.101010000
............................................................................................................................CTGAACAAC-ATAATGGATGTGT...............................................................................................................................22100.101010000
..................................................................................................................................................................ACTCCTCTGAT-CCTTTATTGTCCA.......................................................................................24100.101100000
..................................................................................................................................................................ACTCCTCTGAT-CCTTTATTGTCCAGC.....................................................................................26100.101010000
........................................................................................................................................................AGGTCCATGGACTCCTCTGAT-CCTT................................................................................................25100.101100000
.............................................................................................................................................ATGTGTTCCAAAGGTCCATGGAC..............................................................................................................23100.101010000
...........................................................................................................................................GGATGTGTTCCAAAGGTCCATGGACTCC...........................................................................................................28100.101100000
.................................................................................................................................................................................TTATTGTCCAGCCTACATC..............................................................................19100.101010000
.....................................................................................AAGATTTATAGGCGATCTCACGC......................................................................................................................................................................23100.101010000
..................................................................................................................................................................ACTCCTCTGAT-CCTTTATTGTCCAGCC....................................................................................27100.101010000
.........................................................................................................................................................GGTCCATGGACTCCTCTGAT-C...................................................................................................21100.101010000
....................................................................................TAAGATTTATAGGCGATCTCAC........................................................................................................................................................................22100.101010000
........................................................................................................................................................................CTGAT-CCTTTATTGTCCAGCCTACATCT.............................................................................28100.101100000
...................................................................................................................................................................CTCCTCTGAT-CCTTTATTGTCCAGC.....................................................................................25100.101010000
....................................................................................................................................................................TCCTCTGAT-CCTTTATTGTCCAGC.....................................................................................24100.101010000
...........................................................................................................................................................................AT-CCTTTATTGTCCAGCCTACATC..............................................................................24100.101010000
....................................................................................TAAGATTTATAGGCGATCTCACGC......................................................................................................................................................................24100.101001000
.......................................................................................................................................TAATGGATGTGTTCCAAAGGTC.....................................................................................................................22100.101010000
...........................................................................................TATAGGCGATCTCACGCAAGACAGAAT............................................................................................................................................................27100.101010000
.............................................................................................................................................ATGTGTTCCAAAGGTCCATGGACTCC...........................................................................................................26100.101010000
..........................................................................................................................................................GTCCATGGACTCCTCTGAT-CCTT................................................................................................23100.101100000
..................................................................................................................................................TTCCAAAGGTCCATGGACTCCTCTGAT-CC..................................................................................................29100.101100000
..........................................................................................................................................TGGATGTGTTCCAAAGGTCCATGGA...............................................................................................................25100.101100000
..........................................................................................................................................................................GAT-CCTTTATTGTCCAGCCTACA................................................................................23100.101100000
...........................................................................................................................................................TCCATGGACTCCTCTGAT-CCTTTATTG...........................................................................................27100.101100000
..............................................................................................................................................................................CCTTTATTGTCCAGCCTACATC..............................................................................22100.101010000
...............................................................................................................................................................................CTTTATTGTCCAGCCTACATC..............................................................................21100.101100000
................................................................................................................................................TGTTCCAAAGGTCCATGGACTCCTCTGA......................................................................................................28100.101010000
..............................................................................................................................................TGTGTTCCAAAGGTCCATGGACTCCTC.........................................................................................................27100.101010000
....................................................................................................................................................CCAAAGGTCCATGGACTCCTCTGA......................................................................................................24100.101100000
...................................................................................................................................................................CTCCTCTGAT-CCTTTATTGTCCAGCC....................................................................................26100.101010000
...............................................................................................................................................GTGTTCCAAAGGTCCATGGACTC............................................................................................................23100.101100000
...................................................................................................................................................TCCAAAGGTCCATGGACTCCTCTGAT-C...................................................................................................27100.101010000
.........................................................................................................................................................................TGAT-CCTTTATTGTCCAGCCTACA................................................................................24100.101100000
..................................................................................................................................................TTCCAAAGGTCCATGGACTCCTCTGA......................................................................................................26100.101010000
...............................................................................................................................................................................CTTTATTGTCCAGCCTACATCC.............................................................................22100.101010000
..................................................................................................................................................TTCCAAAGGTCCATGGACTCCTCT........................................................................................................24100.101010000
............................................................................................................................................................................T-CCTTTATTGTCCAGCCTACATCT.............................................................................24100.101100000
...................................................................................................................................................TCCAAAGGTCCATGGACTCCTCTGAT-CC..................................................................................................28100.101010000
...............................................................................................................................................GTGTTCCAAAGGTCCATGGACTCC...........................................................................................................24100.101010000
....................................................................................TAAGATTTATAGGCGATCTCACG.......................................................................................................................................................................23100.101000010
............................................................................................................................................GATGTGTTCCAAAGGTCCATGGACT.............................................................................................................25100.101010000
.......................................................................................................................................TAATGGATGTGTTCCAAAGGTCC....................................................................................................................23100.101100000
..............................................................................................................................................................................................................................................TCTACCAC-ACGAAGTTATTGAACTTTT........27110.091010000
................................................................................................................................................................................................................................................TACCAC-ACGAAGTTATTGAACT...........22110.091100000
..............................................................................................................................................................................................................................................TCTACCAC-ACGAAGTTATTGAAC............23110.091010000
..............................................................................................................................................................................................................................................TCTACCAC-ACGAAGTTATTGAACTTTTG.......28110.091100000
..............................................................................................................................................................................................................................................TCTACCAC-ACGAAGTTATTGAA.............22110.091010000
....................................................................................................................................................................................................................AAG----AAAAATAAA--AGTAAAAATCTAC...............................25110.091010000
.............................................................................................................................................................................................................................................ATCTACCAC-ACGAAGTTATTGAACTTT.........27110.091100000
..................................................................................................................................................................................................................................................CCAC-ACGAAGTTATTGAACTTTT........23110.091010000
..............................................................................................................................................................................................................................................TCTACCAC-ACGAAGTTATTGAACTTTG........27110.091010000
..................................................................................................................................................................................................................................AA--AGTAAAAATCTACCAC-ACGAAGT....................25110.091010000
................................................................................................................................................................................................................................................TACCAC-ACGAAGTTATTGAACTTT.........24110.091010000
droBip1
C---------------------------------------------------------------------------AACAAGTACAAGAGTGAGAAAAGGTTACATGATCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTACCACAGAGCAATGGGTTCCTCAGAT-CTTCTTGTGTCGAGCATCTATCTAACAA-AAATA-TTGGGT----CAGAAAAAT--AAGCTACCCCTACCAG-CAGACGTTTTCGAACTTTTGAAATCACSizeHit CountTotal NormTotal
No Reads
droKik1
A-----------------------------------------------------------------------------------TAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCGATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGGT----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGGAATCACSizeHit CountTotal NormTotal
No Reads
droFic1
C---------------------------------------------------------------------------AAGTACTATAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTTCACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCCATGGATACCTCAGAT-CCTCTTGTTTCGAGCATCTACCTATCAA-AAAGA-TTGGGT----CAGCAAAAT--AAACTACCCCTTCCAC-CAGACGTAATCGAACTTTTGGAATCACSizeHit CountTotal NormTotal
No Reads
droEle1
G----------------TAACCGCATCCCCCCTACCTCTTGGCTGTCTAGGTGAGAACGCATCTGAGGCTCGAAACAAGATTTATAAAAATGATCGACGTTCGCATGCAAGGCAAAATAGTCGACTGAATACCAATGACAGATGTTTTTTGTAGAGCACTCGATTCGTCGGAT-CCATTTGTTTCCAGCATTTATATCAACG-ATAGA-CTACTT----GCCAACAAAAAATATAACAGTTATCCA-TAGAGGTTATTCACCTGTTAAGACAACSizeHit CountTotal NormTotal
No Reads
droRho1
A-----------------------------------------------------------------------------------TAAGAGTGACAGAAGGTTACATGCTCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCAATGGATTCCTCAGATTCCTCTTGTGTCAAGCATTTATTTAACAA-AAAGA-TTGGGT----CACCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGGAATCACSizeHit CountTotal NormTotal
No Reads
droBia1
A-----------------------------------------------------------------------------------TAAAAATGATAGACGTTCTCATGCAAGACAAAATAGTCGCTTAAACAAT-ATGACTGACGTTTTTTGTAGAGCACTTGATTCATCAGAT-CCGATGGTTTCCAGCATCCACAAAAAAGGAAAGA-GTACAT----CAAAACAAAAAACGCAGCAGTTACCCATTAGAAGTTATTGATCTTTTAACACCACSizeHit CountTotal NormTotal
No Reads
droTak1
A-----------------------------------------------------------------------------------TAAGAGTGACAGGAGGTTACATGCTCGACAGAGTTCACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCAATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGTT----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATACAACTTTTGGAATCACSizeHit CountTotal NormTotal
No Reads
dm3
A--------------------------------------------------------------------------------------AAGGGACCGATTATCACATGCAAGGAAAAATAGTCGGATCAATACG-ATGAGCGATATTTTCCACAGAGCTATTGATTCCTCGGAC-CCACTATTATCAACAATATGTTTAAAAG-AAAGA-GAGAGA----AAAAATAGG--AAAAAACCACTTCCGA-AGGCAGTAATAAGTCTTTTGGAAATACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
T---------------------------------------------------------GCGTGTGAAGCCCGGAATAAGCTTTACAAAAGGGACCGACTATCACATGCAAGGAAAAATAGTCGGATCAATAGG-ATGAGTGATATTTTCCACGGAGCGATTGATTACTCGGAC-CCACTATTATCAACAATTTGTTTAAAAG-AAAGA-----GA----GAAAAAATA--AGAAAACCACTTCCGA-AGGCAGTAATAAGTCTTTTGGAAATACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGA.....................................................................................................................................................271426.50371000700110187242620123000
.......................................................................................................CATGCAAGGAAAAATAGTCG.......................................................................................................................................................20167.131140000114000000000000
.......................................................................................................CATGCAAGGAAAAATAGTCGGATC...................................................................................................................................................24166.56105000100682581020000
....................................................................CCCGGAATAAGCTTTACAAAAGGG......................................................................................................................................................................................2496.115500010010189152000000
....................................................................CCCGGAATAAGCTTTACAAAAGGGAC....................................................................................................................................................................................2684.3835013022013005000000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AA.....................................................................24153.9359000000101416190000000
....................................................................................................TCACATGCAAGGAAAAATAGTCGGA.....................................................................................................................................................25163.81610000001734411040000
.............................................................................................................................TCAATAGG-ATGAGTGATAT.................................................................................................................................19183.0655000005500000000000
.......................................................................................................CATGCAAGGAAAAATAGTCGGA.....................................................................................................................................................22162.8145000038007000000000
......................................................................................................................AGTCGGATCAATAGG-ATG.........................................................................................................................................18152.8042000042000000000000
....................................................................CCCGGAATAAGCTTTACAAAAGGGACCG..................................................................................................................................................................................2882.7522000022000000000000
........................................................................................................................................................................................................................................................GGCAGTAATAAGTCTTTTGGA.....21202.6052000050001010000000
.........................................................................................................TGCAAGGAAAAATAGTCG.......................................................................................................................................................18162.3838000038000000000000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AAAGA-----.............................................................27111.822000010085330000000
....................................................................CCCGGAATAAGCTTTACAAAAGG.......................................................................................................................................................................................2391.781600000046312000000
.......................................................................................................CATGCAAGGAAAAATAGTCGGATCA..................................................................................................................................................25161.5625000000014170021000
........................................................................................................................................................................................................................................................GGCAGTAATAAGTCTTTTGGAAATA.25181.5628000200210059000000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AAA....................................................................25111.551700000015830000000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGAT....................................................................................................................................................28141.502100000069600000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATA...............................................................................................................................................26161.061700000011500082000
......................................................................................................................................ATGAGTGATATTTTCCA...........................................................................................................................17201.0521000000000021000000
....................................................................CCCGGAATAAGCTTTACAAAAGGGA.....................................................................................................................................................................................2591.00900000013122000000
......................................................................................................................................ATGAGTGATATTTTCCACGGAGC.....................................................................................................................2331.00300001000002000000
.....................................................................................................................................................................................................................................................A-AGGCAGTAATAAGTCTTTTGGAA....24200.9519000000401500000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCAAT................................................................................................................................................24160.941500000050200071000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAGG-............................................................................................................................................28120.921100000008200010000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-A......................................................................23160.881400010032440000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAGG-A...........................................................................................................................................29120.831000000054100000000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AAAGA-----GA----.......................................................29110.82900000061200000000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGG......................................................................................................................................................26140.791100000005321000000
........................................................................................................................................................................................................................................................GGCAGTAATAAGTCTTTTGGAAATAC26180.781400010000049000000
...........................................................................TAAGCTTTACAAAAGGGACCGACTA..............................................................................................................................................................................2570.71500000000000041000
.......................................................................................................CATGCAAGGAAAAATAGTCGGAT....................................................................................................................................................23160.691100000038000000000
.......................................................................................................CATGCAAGGAAAAATAGTCGGATCAA.................................................................................................................................................26160.691100000019000010000
......................................................................................................................................ATGAGTGATATTTTCCACGGAGCGAT..................................................................................................................2630.67200000000002000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCAATA...............................................................................................................................................25160.631000000060400000000
......................................................................................................................AGTCGGATCAATAGG-A...........................................................................................................................................16150.60900000090000000000
............................................................................................................AAGGAAAAATAGTCGGATCAATAGG-A...........................................................................................................................................26120.58700000003031000000
................................................................................................ACTATCACATGCAAGGAAAAATAGTCGGA.....................................................................................................................................................29110.55600000033000000000
........................................................................................................................................................................................................................................................GGCAGTAATAAGTCTTTTGGAAAT..24200.501000000003034000000
..................................................................AGCCCGGAATAAGCTTTACAAAAGGGA.....................................................................................................................................................................................2780.50400000010021000000
................................................................................................................................................................................................TGTTTAAAAG-AAAGA-----GA----GAAAAAA................................................2460.50300000000300000000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGATC...................................................................................................................................................29140.50700000015100000000
..................................................................................TACAAAAGGGACCGACTATCACATGCA.....................................................................................................................................................................27170.47800000010100060000
.....................................................................................................................................................................................................................................................A-AGGCAGTAATAAGTCTTTTGGAAA...25200.45900000020700000000
....................................................................................................TCACATGCAAGGAAAAATAGTCGGATC...................................................................................................................................................27160.44700000003011020000
...................................................................................................ATCACATGCAAGGAAAAATAGTCGGA.....................................................................................................................................................26140.43600000014000001000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AAAGA-----GA----G......................................................3070.43300000030000000000
............................................................................................................AAGGAAAAATAGTCGGATCAATAGG-............................................................................................................................................25120.42500000013010000000
..................................................................................TACAAAAGGGACCGACTATCACATGC......................................................................................................................................................................26180.39700000022200001000
...............................................................................................................................................................TTGATTACTCGGAC-CCACTATTATT.........................................................................................2560.33200000000200000000
....................................................................CCCGGAATAAGCTTTACAAAAGA.......................................................................................................................................................................................2390.33300000002010000000
...............................................................TGAAGCCCGGAATAAGCTTTA..............................................................................................................................................................................................2190.33300000000003000000
......................................................................................................................................ATGAGTGATATTTTCCACGGAGCG....................................................................................................................2430.33100001000000000000
............................................................................................................................................GATATTTTCCACGGAGCGAT..................................................................................................................2030.33100000000001000000
......................................................................CGGAATAAGCTTTACAAAAGGGACCGAC................................................................................................................................................................................2860.33200000000000002000
...................................................................................................................................................TCCACGGAGCGATTG................................................................................................................1530.33100000000100000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAG..............................................................................................................................................27120.33400000001101010000
...................................................................GCCCGGAATAAGCTTTACAAAAGGGA.....................................................................................................................................................................................2690.33300000011100000000
...................................................................................................................................................................TTACTCGGAC-CCACTATTATCAACAA....................................................................................2660.33200200000000000000
....................................................................................................................................................................TACTCGGAC-CCACTATTATCAACAAT...................................................................................2660.33200200000000000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAAT................................................................................................................................................25160.31500000000100040000
.......................................................................................................CATGCAAGGAAAAATAGTCGGATCAAT................................................................................................................................................27160.31500000002102000000
..........................................................................................................GCAAGGAAAAATAGTCGGATC...................................................................................................................................................21160.31500000040001000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAA.................................................................................................................................................24160.31500000000010040000
......................................................................................................ACATGCAAGGAAAAATAGTCGGATCAA.................................................................................................................................................27160.31500000000000050000
.........................................................................................................TGCAAGGAAAAATAGTCGGATC...................................................................................................................................................22160.31500000001200020000
..............................................................................................CGACTATCACATGCAAGGAAAAATAGT.........................................................................................................................................................27130.31400010000003000000
....................................................................................................TCACATGCAAGGAAAAATAGTCGGAA....................................................................................................................................................26170.29500000000000050000
....................................................................................................TCACATGCAAGGAAAAATAGTCGGAT....................................................................................................................................................26160.25400000000010021000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAGA-............................................................................................................................................28120.25300000030000000000
...........................................................................................................CAAGGAAAAATAGTCGGATCAATA...............................................................................................................................................24160.25400000000000040000
...............................................................TGAAGCCCGGAATAAGCTTTACAAAAGGG......................................................................................................................................................................................2980.25200000011000000000
...............................................................TGAAGCCCGGAATAAGCTTTACAAAAGGGA.....................................................................................................................................................................................3080.25200000020000000000
...............................................................TGAAGCCCGGAATAAGCTTTACAAAAGG.......................................................................................................................................................................................2880.25200000000200000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCA..................................................................................................................................................22160.25400000010000003000
......................................................................................................................................ATGAGTGATATTTTCCAC..........................................................................................................................18200.25500000000005000000
.....................................................................CCGGAATAAGCTTTACAAAAGGGACCGA.................................................................................................................................................................................2880.25200000000000020000
.....................................................................................................................................................................ACTCGGAC-CCACTATTATCAACAAT...................................................................................2590.22200000011000000000
....................................................................CCCGGAATAAGCTTTACAAAAC........................................................................................................................................................................................2290.22200002000000000000
...........................................................................TAAGCTTTACAAAAGGGACCGA.................................................................................................................................................................................2290.22200000000010010000
....................................................................CCCGGAATAAGCTTTACAAAAG........................................................................................................................................................................................2290.22200000020000000000
.........................................................................................................................................................................................................................................................GCAGTAATAAGTCTTTTGGAAATA.24190.21400000011002000000
.......................................................................................................................................................................................TCAACAATTTGTTTAAAAG-AAAGA-----GA----GAA....................................................2950.20100000001000000000
.....................................................................................................................TAGTCGGATCAATAGG-ATGAGTGA....................................................................................................................................24150.20300000000120000000
.....................................................................................................................................................................................................................................................A-AGGCAGTAATAAGTCTTTTGGA.....23200.20400000020200000000
...............................................................................................................................................................................................TTGTTTAAAAG-AAAGA-----GA----GAAAAAA................................................2550.20100000000001000000
..............................................................................................................................................................................................................................................................AATAAGTCTTTTGGAAATA.19200.20400000000004000000
..............................................................................................................................................................................................................................................................AATAAGTCTTTTGGAAATAC20200.20400000000004000000
................................................................................................................................................................................................TGTTTAAAAG-AAAGA-----GA----GAAAAAAT...............................................2550.20100000000100000000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGAA....................................................................................................................................................28150.20300000000000012000
...........................................................................................................................................................................................................................................................AGTAATAAGTCTTTTGGAAATA.22200.20400000000004000000
.....................................................................................................................TAGTCGGATCAATAGG-ATGAGTGATA..................................................................................................................................26150.20300000002010000000
....................................................................................................TCACATGCAAGGAAAAATAGTCGGATCAA.................................................................................................................................................29160.19300000000110001000
.......................................................................................................CATGCAAGGAAAAATAGTCGGATCAATA...............................................................................................................................................28160.19300000002010000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCAA.................................................................................................................................................23160.19300000000200010000
.......................................................................................................CATGCAAGGAAAAATAGTCGG......................................................................................................................................................21160.19300000002010000000
...........................................................................................................CAAGGAAAAATAGTCGGATCAA.................................................................................................................................................22160.19300000000000021000
............................................................................................................AAGGAAAAATAGTCGGATCAATAGG-T...........................................................................................................................................26120.17200000002000000000
....................................................................CCCGGAATAAGCTTTACAAAAGGGACCGAC................................................................................................................................................................................3060.17100000001000000000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AAAGA-----GA----GA.....................................................3160.17100000010000000000
................................................................................................................................................................TGATTACTCGGAC-CCACTATAT...........................................................................................2260.17100000010000000000
...................................................................................................................................................................TTACTCGGAC-CCACTATTATCAACAAT...................................................................................2760.17101000000000000000
........................................................................................AGGGACCGACTATCACATGCAAGGAAA...............................................................................................................................................................27120.17200000000000011000
.............................................................................................................AGGAAAAATAGTCGGATCAATAGG-A...........................................................................................................................................25120.17200000001001000000
.............................................................................................................................................................GATTGATTACTCGGAC-CCACTATT............................................................................................2460.17100000001000000000
................................................................................................................................................................TGATTACTCGGAC-CCACTATTATC.........................................................................................2460.17100000001000000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAGG-T...........................................................................................................................................29120.17200000011000000000
................................................................................................................................................................TGATTACTCGGAC-CCACTAAA............................................................................................2160.17100000001000000000
............................................................................................................................................................CGATTGATTACTCGGAC-CCACTATTA...........................................................................................2660.17100000010000000000
................................................................................................................................................................TGATTACTCGGAC-CCAT................................................................................................1760.17100000001000000000
.....................................................................................................................................................................................TATCAACAATTTGTTTAAAAG-AAAGA-----GA----.......................................................28120.17200000011000000000
...............................................................................................................................................................TTGATTACTCGGAC-CCACTATTATC.........................................................................................2560.17100000001000000000
................................................................................................................................................................TGATTACTCGGAC-CCACTATTATCAACA.....................................................................................2860.17100000000000010000
...............................................................................................GACTATCACATGCAAGGAAAAATAGT.........................................................................................................................................................26130.15200000000002000000
.......................................................................................................................................................................................................................................................AGGCAGTAATAAGTCTTTTGGAAA...24200.15300000010200000000
.....................................................................................................................................................................................TATCAACAATTTGTTTAAAAG-AAAGA-----GA----GA.....................................................3070.14100000001000000000
...........................................................................TAAGCTTTACAAAAGGGACCGACTAT.............................................................................................................................................................................2670.14100000000000001000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGT.....................................................................................................................................................27140.14200000000000020000
...................................................................................................................................................................TTACTCGGAC-CCACTATT............................................................................................1870.14100000000001000000
...................................................................................................ATCACATGCAAGGAAAAATAGTCGGAT....................................................................................................................................................27140.14201000001000000000
........................................................................................................................................................................................CAACAATTTGTTTAAAAG-AAAGA-----GA----GA.....................................................2770.14100000010000000000
.....................................................................CCGGAATAAGCTTTACAAAAGGGACA...................................................................................................................................................................................2680.13100000000000010000
........................................................................................................ATGCAAGGAAAAATAGTCGGATCAAT................................................................................................................................................26160.13200000000000011000
............................................................................................................................................................................................................................................CCACTTCCGA-AGGCAGTAATAAGTC............25160.13200200000000000000
...................................................................................................................................................................................................TTAAAAG-AAAGA-----GA----GAAAAAA................................................2180.13100000000001000000
....................................................................CCCGGAATAAGCTTTACAAAAGGGACC...................................................................................................................................................................................2780.13100000001000000000
......................................................................CGGAATAAGCTTTACAAAAGGGAC....................................................................................................................................................................................2480.13100000000000010000
..................................................................AGCCCGGAATAAGCTTTACAAAAGG.......................................................................................................................................................................................2580.13100000000001000000
....................................................................................................TCACATGCAAGGAAAAATAGTCGGATCA..................................................................................................................................................28160.13200200000000000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAA..............................................................................................................................................27160.13200000000000020000
...............................................................TGAAGCCCGGAATAAGCTTTACAAAA.........................................................................................................................................................................................2680.13100010000000000000
............................................................................................................AAGGAAAAATAGTCGGATCAATA...............................................................................................................................................23160.13200000000000002000
...........................................................................................................CAAGGAAAAATAGTCGGATCAATTT..............................................................................................................................................25170.12200000000000020000
....................................................................CCCGGAATAAGCTTTACAAAAGGGAA....................................................................................................................................................................................2690.11100000000001000000
...............................................................TGAAGCCCGGAATAAGC..................................................................................................................................................................................................1790.11100000000001000000
......................................................................CGGAATAAGCTTTACAAAAGGG......................................................................................................................................................................................2290.11100000001000000000
....................................................................CCCGGAATAAGCTTTACAAAAGGT......................................................................................................................................................................................2490.11100000000010000000
...............................................................TGAAGCCCGGAATAAGCTT................................................................................................................................................................................................1990.11100000000001000000
................................................................................TTTACAAAAGGGACCGACTATCACATG.......................................................................................................................................................................27190.11200000002000000000
.........................................................................................................................................................................................................................................................GCAGTAATAAGTCTTTTGGAAATAC25190.11200000011000000000
........................................................................................................................................................................CGGAC-CCACTATTATCAACAATTTGT...............................................................................26190.11200000000200000000
................................................................................TTTACAAAAGGGACCGACTATCACA.........................................................................................................................................................................25190.11200000010000001000
...............................................................................................................................................................................................................................................................ATAAGTCTTTTGGAAATAC19200.10200010000001000000
......................................................................................................................................................................CTCGGAC-CCACTATTATCAACAAT...................................................................................24200.10200000011000000000
.......................................................................................................................................................................TCGGAC-CCACTATTATCAACAATT..................................................................................24200.10200000000110000000
.......................................................................GGAATAAGCTTTACAAAAGGG......................................................................................................................................................................................21100.10100000001000000000
............................................................................AAGCTTTACAAAAGGG......................................................................................................................................................................................16100.10100000000001000000
...............................................................................................................................................................................................................................................................ATAAGTCTTTTGGAAATA.18200.10200000000002000000
........................................................................................................................................................................................................................................................GGCAGTAATAAGTCTTTG........18200.10200002000000000000
...................................................................GCCCGGAATAAGCTTT...............................................................................................................................................................................................16100.10100000000001000000
..............................................................................................................................................................................................................................................................AATAAGTCTTTTGGAA....16200.10200000020000000000
......................................................................................................................................ATGAGTGATATTTTC.............................................................................................................................15200.10200000000002000000
....................................................................CCCGGAATAAGCTTTA..............................................................................................................................................................................................16100.10100000000001000000
.....................................................................................................................................................................ACTCGGAC-CCACTATTATCAAC......................................................................................22100.10110000000000000000
............................................................................................................................................................................................................................................................GTAATAAGTCTTTTGGAAATA.21200.10200000000101000000
.............................................................................................................................................................................................................................................CACTTCCGA-AGGCAGTAAA.................19200.10200002000000000000
.........................................................................................................................................................................................................................................................GCAGTAATAAGTCTTTTGGA.....20200.10200000011000000000
....................................................................................................................................................................................TTATCAACAATTTGTTTAAAAG-AAAGA-----A............................................................28110.09100000001000000000
................................................................................................................................................................................................TGTTTAAAAG-AAAGA-----GA----G......................................................18120.08100000000100000000
..........................................................................................GGACCGACTATCACATGCAAGGA.................................................................................................................................................................23120.08100000000000001000
............................................................................................................AAGGAAAAATAGTCGGATCAATAG..............................................................................................................................................24120.08100000000000010000
.................................................................................................................AAAATAGTCGGATCAATAGG-AT..........................................................................................................................................22120.08100100000000000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCAATAGA-GC..........................................................................................................................................29120.08100000010000000000
..........................................................................................GGACCGACTATCACATGCAAGG..................................................................................................................................................................22120.08100000000000001000
....................................................................CCCGGAATAAGCTTTACAAAAGGA......................................................................................................................................................................................24120.08100000010000000000
.....................................................................................AAAAGGGACCGACTATCACATGCAAGGA.................................................................................................................................................................28120.08100000010000000000
.................................................................................................................AAAATAGTCGGATCAATAGG-ATGAGTGA....................................................................................................................................28120.08100000000010000000
.................................................................................................................AAAATAGTCGGATCAATAGG-............................................................................................................................................20120.08100000001000000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCAATAG..............................................................................................................................................26120.08100000010000000000
...........................................................................................................CAAGGAAAAATAGTCGGATCAATAGG-A...........................................................................................................................................27120.08100000000010000000
..........................................................................................................GCAAGGAAAAATAGTCGGATCAATAGT-............................................................................................................................................27120.08100000010000000000
...........................................................................................................CAAGGAAAAATAGTCGGATCAATAGG-............................................................................................................................................26120.08100000001000000000
.............................................................................................CCGACTATCACATGCAAGGAAAAATAGT.........................................................................................................................................................28120.08100000000000001000
..............................................................................................................................................................................................TTTGTTTAAAAG-AAAGA-----G............................................................18120.08100000000001000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAGG-AT..........................................................................................................................................30120.08100000010000000000
.................................................................................................................AAAATAGTCGGATCAATAGG-A...........................................................................................................................................21120.08100000010000000000
........................................................................................AGGGACCGACTATCACATGCAAGGAA................................................................................................................................................................26120.08100000001000000000
.............................................................................................................AGGAAAAATAGTCGGATCAATAGG-............................................................................................................................................24120.08100000010000000000
.................................................................................................................AAAATAGTCGGATCAATAGG-ATGAGT......................................................................................................................................26120.08101000000000000000
.....................................................................................................................................................................................................AAAAG-AAAGA-----GA----GAA....................................................15120.08100000000010000000
.........................................................................................................TGCAAGGAAAAATAGTCGGATCAATAGT-............................................................................................................................................28120.08100000010000000000
...................................................................................................................AATAGTCGGATCAATAGG-ATGAGTGA....................................................................................................................................26130.08100000010000000000
...................................................................................ACAAAAGGGACCGACTATCACATGCAA....................................................................................................................................................................27130.08100000000000010000
...................................................................................................................AATAGTCGGATCAATAGG-ATGAGT......................................................................................................................................24130.08100000001000000000
..................................................................................TACAAAAGGGACCGACTATCACATGCAA....................................................................................................................................................................28130.08100000000000010000
...................................................................................................................AATAGTCGGATCAATAGG-............................................................................................................................................18130.08100000010000000000
...................................................................................................................AATAGTCGGATCAATAGG-AT..........................................................................................................................................20130.08100000000001000000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGG.....................................................................................................................................................27140.07100000001000000000
..................................................................................................TATCACATGCAAGGAAAAATAGTCGGATCA..................................................................................................................................................30140.07100000001000000000
.....................................................................................................................TAGTCGGATCAATAGG-ATGAGTGC....................................................................................................................................24150.07100000000001000000
droSec2
AGC------------------------------------------------------------------GTGCAACAAACTTTACAAGAACGATAGAAAATCTCACGCAGGA-AATGTAGCCGACTAGCAAAC-ATTACAGATGTTTTCAATAGAGCAATGGATTCATCTGAT-CACTTGCTTTCAAGTCTTTGTTTAAGAG-ATCGAAGTAAGT----TTGGAAA-A--AAGAAACTCCTTCCAA-AAGATGTAATCGTTATTCTTCAAAATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................ACTAGCAAAC-ATTACAGATGT.................................................................................................................................2111.0010010
droYak3
A-----------------------------------------------------------------------------------TAAGAGTGACAGGAGGTTACATGCTCGAAAGAGTACACGGCAGAACAAC-ATGGCAGACGTTTTCCACAGAGCAATGGATTCCTCAGAT-CCTCTTGTGTCGAGCATCTATCTAACAA-AAAGA-TTGGGC----CAGCAAAAT--AAACTACCCCTACCAG-CAGACGTAATCGAACTTTTGAAATCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................TCCACAGAGCAATGGATTCCTC.........................................................................................................2260.17101000000000
..........................................................................................................................................................................................................................................TACCCCTACCAG-CAGACGTAATCGAAC............2760.17101000000000
droEre2
A-------------------------------------------------------------------------ATAAAAATTACAAAAGGGATCGACTATCACATGCCAGGAAAAATAGTCGAATTAATACG-ATGAGTGATATTTTCCAGAGAGCGATTGCTTCCTCGGAC-CCACTATTATCAAAAATTTGTTAAAAAA-AAAGA-TAGAGAGAGAAAAAATAAG--AAAAAACCACTTCCGA-AGGCAGTAATAAGTCTTTTGGAAATGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 01:53 AM