ID:

dps_1860

 Coordinate:

Unknown_group_207:6156-6306 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9 -13.8 -13.4

Flybase annnotation

exon [dpse_GLEANR_10487:2]; CDS [Dpse\GA22464-cds]; intron [Dpse\GA22464-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTTTTGAACCTTTCTCGTTTCTCTATAATATATATTCCTCATTTGTGTATCTAACACTGCCCCTTGGCTATGTGCCTATATAATAGCTACTTACAGCCAACAGCTAGTAAGAAACTAGTAATCTTTTAACAGCGATGGATGATTTATCGATTCCCAACCGGAAACACCCATAAATGTGGACTCTCAGCCGAACTCCGTAGATTTATCCCTGATTTTTGGGATTAAGACCCAAACCTATCCCGAGAGCAAT
************************************************************************************(((...((((((((.....))).)))))...)))...............(((((((...))))))).((((.....)))).............************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M022
male body		 SRR902011
testis
 V112
male body		 M062
head
 M059
embryo
....................................................................................................................................................................................................CGTAGATTTATCCCTGATTTTTGG............................... 24 0 1 2.00 2 1 0 0 1 0 0 0
.......................................................................................................................................................TTCCCGGGCGGAAACACC.................................................................................. 18 3 20 1.65 33 23 0 0 0 0 8 2
........................................................................................................................................................TCCCAACCGGAAACACCCATAAATG.......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................CCCAAACCTATCCCGAGAG.... 19 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................ACTCCGTAGATTTATCCCTGATTTGT................................. 26 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................TAAGACCCAAACCTATCCCGAGAGC... 25 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................TCAGCCGAACTCCGTAGATTTATCC.......................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................CACCCATAAATGTGGACTCTCAGC.............................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
..............................ATATATTCCTCATTTGTGTATCTA..................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................ACTCCGTAGATTTATCCCTGATTTT.................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................TAACAGCGATGGATGATTTATCGAT................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0
........................................................................................................................................................................................TCAGCCGAACTCCGTAGATTTATCCC......................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................TATCGATTCCCAACCGGAAA...................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................TAGCTACTTACAGCCAACAGCTAGT.............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................ACTCCGTAGATTTATCCCTGATTT................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................AAACACCCATAAATGTGGACTCTCAGCC............................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0
..............................................TGTATCTAACACTGCCCCTTGGCTATG.................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TTGGGATTAAGACCCAAACCTATC........... 24 0 6 0.33 2 0 2 0 0 0 0 0
.......................................................................................................................................................TTCCCGGGCGGAAACACCC................................................................................. 19 3 11 0.18 2 1 0 0 0 0 1 0
......................................................................................................................................................ATTCCCGGGCGGAAACACC.................................................................................. 19 3 16 0.13 2 0 0 0 0 0 0 2
.................................................................................................................................................TATCGATTCCCAACCGGAAAAAA................................................................................... 23 2 14 0.07 1 1 0 0 0 0 0 0

Anti-sense strand reads

CGAAAACTTGGAAAGAGCAAAGAGATATTATATATAAGGAGTAAACACATAGATTGTGACGGGGAACCGATACACGGATATATTATCGATGAATGTCGGTTGTCGATCATTCTTTGATCATTAGAAAATTGTCGCTACCTACTAAATAGCTAAGGGTTGGCCTTTGTGGGTATTTACACCTGAGAGTCGGCTTGAGGCATCTAAATAGGGACTAAAAACCCTAATTCTGGGTTTGGATAGGGCTCTCGTTA
**************************************************************************(((...((((((((.....))).)))))...)))...............(((((((...))))))).((((.....)))).............************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 SRR902010
ovaries
 V112
male body		 SRR902011
testis
 M062
head
 GSM444067
head
 M059
embryo
..................................................................................................................................................................................CCTGAGAGTCGGCTTGAGGCATCT................................................. 24 0 1 4.00 4 4 0 0 0 0 0 0 0
......................................................................................CGATGAATGTCGGTTGTCGATCAT............................................................................................................................................. 24 0 1 4.00 4 4 0 0 0 0 0 0 0
...............................................................................................................................................AAATAGCTAAGGGTTGGCCTT....................................................................................... 21 0 14 3.21 45 38 2 5 0 0 0 0 0
......................................................................................................................CATTAGAAAATTGTCGCTACCTACT............................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................................CTGAGAGTCGGCTTGAGGCATCT................................................. 23 0 1 3.00 3 1 2 0 0 0 0 0 0
.....................................................................................................................................................................................GAGAGTCGGCTTGAGGCATCT................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................TACACCTGAGAGTCGGCTTGAGGCATCT................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................GACGGGGAACCGATACACGGATAT.......................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................CACCTGAGAGTCGGCTTGAGGCATCT................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................ACCTGAGAGTCGGCTTGAGGCATCT................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0
........................................................................................................................................ACCTACTAAATAGCTAAGGGTTGGCCTT....................................................................................... 28 0 1 2.00 2 0 0 2 0 0 0 0 0
.......................................................GTGACGGGGAACCGATACACGGATAT.......................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
................................................................................................................................................AATAGCTAAGGGTTGGCCTT....................................................................................... 20 0 14 1.57 22 21 1 0 0 0 0 0 0
......................................................................................................................CATTAGAAAATTGTTGCTACCTACTA........................................................................................................... 26 1 2 1.50 3 1 0 2 0 0 0 0 0
.................................................................................................................................................ATAGCTAAGGGTTGGCCTT....................................................................................... 19 0 14 1.43 20 17 0 1 0 0 0 0 2
......................................................................................................................................................TTAGGGTCGGCCTTTGTAGGTATT............................................................................. 24 3 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................GATCATTAGAAAATTGTCGCTACCTACT............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................ACCTGAGAGTCGGCTTGAGGCAT................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................ACACCTGAGAGTCGGCTTGAGGCATC.................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................TGATCATTAGAAAATTGTCGCTACCTACT............................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................TATGGGTTGGCCGTGGTGGGTAT.............................................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................ATCGATGAATGTCGGTTGTCGATCA.............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............AGAGCAAAGAGATATTATATATAAGG.................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................AGCTAAGGGTTGGCCTTTGTGGGTAT.............................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................................CGGATATATTATCGATGAATGTCGGT....................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
...............AGCAAAGAGATATTATATATAAGGA................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................GCTTGGATAGGGCTCTCGTT. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................AATTAGAAAATTGTCGCTACCTACT............................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................AGCTAAGGGTTGGCCTTTGTGGGT................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................ACACCTGAGAGTCGGCTTGAGGCATCT................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................AGAGTCGGCTTGAGGCATCTAAAT............................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................CGATACACGGATATATTATCGATGAAT............................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................ATCGATGAATGTCGGTTGTCGATCAT............................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TTACACCTGAGAGTCGGCTTGAGGCATCT................................................. 29 0 1 1.00 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................CTGAGAGTCGGCTTGAGGCATCTAAAT............................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................TGTGACGGGGAACCGATACACGGATA........................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
........................................................TGACGGGGAACCGATACACGGATAT.......................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................CGATGAATGTCGGTTGTCGATCATTCT.......................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTGTCGGCTTGTGGCATCTCAAT............................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................CGGCTTGAGGCATCTAAATAGGGACT...................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................GGGTTGGCCTTTGTGGGTATT............................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0
......................................................TGTGACGGGGAACCGATACACGGATAT.......................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
................................................................................................................................................................CCTTTGTGGGTATTTACACC....................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0
..............GAGCAAAGAGATATTATATATAAGGA................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................GGCATCTAGATAGGGACTAAAAACCCT............................. 27 1 2 0.50 1 0 0 1 0 0 0 0 0
........................................................................................................................................................AGTGGTGGCCTTTGTGGGT................................................................................ 19 2 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAAACCCTAGTTCTGGGTTTGGATATG.......... 27 2 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................TGATCATTAGAAAATTGT....................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................TCTTTGATCATTAGAAAATTGT....................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................................................................................TAAGGGTTGGCCTTAGTGGGTAT.............................................................................. 23 1 14 0.43 6 0 5 0 0 0 0 0 1
.......................................................................................................................ATTAGAAAATTGTTGCTACCTACTAT.......................................................................................................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................AACTTTGATCATTAGAAAAT.......................................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................CGCTACCCACTAGATAGCT.................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 1 0
.......................................................................................................................ATTAGAAAATTGTTGCTACCTACTA........................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................GTGGTGGCCTTTGTGGGTATG............................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................................AAAATTGTTGCTACCTACTA........................................................................................................... 20 1 4 0.25 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................CTCGGTTAGGATAGGGCT....... 18 2 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................................................................................AATAGCTAAGGGTTGGCCT........................................................................................ 19 0 14 0.21 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AAACCCTAATTCTGGGTTTGGAT............. 23 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AATCTCGGTTTGAATAGGGC........ 20 3 6 0.17 1 0 0 0 1 0 0 0 0
...............................................................................................................................................AAATAGCTAAGGGTTGTCCTT....................................................................................... 21 1 14 0.14 2 2 0 0 0 0 0 0 0
...............................................................................................................................................AAATAGCTAAGGGTTGGCCT........................................................................................ 20 0 14 0.14 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................GGGTCGGCTTGAGGAATGT................................................. 19 3 9 0.11 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................CCTGAGAGTCGGCTAGAGGCATCT................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................CACCTGAGAGTCGGCTCGAGGCATCT................................................. 26 1 10 0.10 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CTGAGAGTCGGCTAGAGGCATCT................................................. 23 1 10 0.10 1 0 1 0 0 0 0 0 0
........................................................................................................................................................AGGGTTGGCCTTAGTGGGTATT............................................................................. 22 1 14 0.07 1 0 0 1 0 0 0 0 0
.................................................................................................................................................ATAGCTAAGGGTTGGCCT........................................................................................ 18 0 14 0.07 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................CTAAGGGTTGGCCTTAGTGGGTATT............................................................................. 25 1 14 0.07 1 0 1 0 0 0 0 0 0
......................................................................................................................................................TAGGGGTTGTCCTTAGTGGGTAT.............................................................................. 23 3 14 0.07 1 0 1 0 0 0 0 0 0
...............................................................................................................................................AAATAGCTAAGGGTTGTCCT........................................................................................ 20 1 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................CAAAATAGCTAAGGGTTGGCCT........................................................................................ 22 1 14 0.07 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................CTAAGAGTTGGCCTTAGTGGGTAT.............................................................................. 24 2 14 0.07 1 0 1 0 0 0 0 0 0
...................................................................................................................................................ACCTAAGGGTTGGCCTTAGTGGGTAT.............................................................................. 26 2 14 0.07 1 0 1 0 0 0 0 0 0
...............................................................................................................................................AAATAGCTAAGGGTTGGCCTG....................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................AAGGGTTGGCCTTAGTGGGTAT.............................................................................. 22 1 14 0.07 1 0 1 0 0 0 0 0 0
......................................................................................................................................................TATGGGTTGGCCTTAGTGGGTAT.............................................................................. 23 2 14 0.07 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................CTAAGGGTTGGCCTTAGTGGGTAT.............................................................................. 24 1 14 0.07 1 0 0 0 0 0 0 0 1
...............................................................................................................................................AAAAAGCTAAGGGTTGGCCTT....................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0 0 0
......................................................................................................................................................TAGGGGTTGGCTTTAGTGGGTATT............................................................................. 24 3 14 0.07 1 0 1 0 0 0 0 0 0
....................................................................................................................................................GCTAAGGGTTGGCCTTAGTGGGTAT.............................................................................. 25 1 14 0.07 1 0 1 0 0 0 0 0 0
......................................................................................................................................................TAAGGGTAGGCCTTAGTGGGTAT.............................................................................. 23 2 14 0.07 1 0 1 0 0 0 0 0 0
......................................................................................................................................................TACGGGTTGGCCTGAGTGGGTAT.............................................................................. 23 3 14 0.07 1 0 1 0 0 0 0 0 0
....................................................................................................................................................GCGAAGGGTTGGCATTAGTGGGTAT.............................................................................. 25 3 14 0.07 1 0 1 0 0 0 0 0 0
......................................................................................................................................................TTAGGGTTGGCCTTAGTGGGTAT.............................................................................. 23 2 14 0.07 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................CTAAGGGTTGTCCTTTGTTGGTAT.............................................................................. 24 2 14 0.07 1 0 1 0 0 0 0 0 0
.................................................................................................................................................AAAACTAAGGGTTGGCCTT....................................................................................... 19 2 16 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................ATTCTTTGTTCACTATAAAAT.......................................................................................................................... 21 3 19 0.05 1 0 1 0 0 0 0 0 0
................................................................................................................................................................CCTTTGGGGGTGTTTACGC........................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_207:6106-6356 + dps_1860 GCTTTTGAACCTTTCTCGTTTCTCTATAATATATATTCCTCATTTGTGTATCTAACACTGCCCCTTGGCTATGTGCCTATATAATAGCTACTTACAGCCAACAGCTAGTA-AGAAACTAGTAATCTTTTAACAGCGATGGATGATTTATCGATTCCCAACCGGAAACACCCATAAATGTGGACTCTCAGCCGAACTCCGTAGATTTATCCCTGATTTTTGGGATTAAGACCCAA-ACCTATCCCGA---------GAGCAAT
droPer2 scaffold_514:2096-2347 + GCTTTTGAACCTTTCTCGTTTCTCTATAATATATATTCCTCATTTGTGTATCTAACACCGCCCCTTGGCTATGTGCCTATATAATAGCTACTTACAGCCAACAGCTAGTATAGAAACTAGTAATCTTTTAACAGCGATGGATGATTTATCGATTCCCAACCGGAAACACCCATAAATGTGGACTCTCAGCCGAACTCCGTAGATTTATCCCTGATTTTTGGGATTAAGACCCAA-ACCTATCCCGA---------GAGCAAT
droVir3 scaffold_13050:2999117-2999117 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_4863:6754-6774 - CAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGTTTCAG---------GAGTAAA
droAna3 scaffold_12944:222645-222680 + CCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAGATAAAAACCGAA-ATATGTCGGAG---------G------
droBip1 scf7180000392013:15635-15680 - TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGTCTTTGGAGTTGGAGCCAAAAATGAGCTAAAG---------AAGCTGC
droKik1 scf7180000301793:9821-9821 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000451829:918-932 - CTGTCCCGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC
droRho1 scf7180000779678:13101-13147 - ACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCCGAACTCTATAGTCTTATAAACAGTTTTTAAGCTTT----------------------------------AG
droSec2 scaffold_42:219066-219069 + CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrX_random_049:134559-134683 + GATGTTT----------------------------------------------------------------------------------------------------------------------------------------TCGGATTAAGCCGCGACTGATAGAGCACATAATGGCGGACCTTCCCAAGGAGCCCTTGGAAGGATCTCACGCTTTTGAGGTTGCTGGGATA-GACTTCTGTGGACCCTTCTTTAACAAG
droEre2 scaffold_3049:3116-3121 + AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCTTTTGAACCTTTCTCGTTTCTCTATAATATATATTCCTCATTTGTGTATCTAACACTGCCCCTTGGCTATGTGCCTATATAATAGCTACTTACAGCCAACAGCTAGTA-AGAAACTAGTAATCTTTTAACAGCGATGGATGATTTATCGATTCCCAACCGGAAACACCCATAAATGTGGACTCTCAGCCGAACTCCGTAGATTTATCCCTGATTTTTGGGATTAAGACCCAA-ACCTATCCCGA---------GAGCAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................CGTAGATTTATCCCTGATTTTTGG.........................................2412.0020100000010
.........................................................................................................................................................TCCCAACCGGAAACACCCATAAATG....................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................CCCAA-ACCTATCCCGA---------GAG....1911.0010100000000
................................................................................................................................................................................................................................TAAGACCCAA-ACCTATCCCGA---------GAGC...2511.0010100000000
.........................................................................................................................................................................................TCAGCCGAACTCCGTAGATTTATCC....................................................2511.0010100000000
......................................................................................................................................................................CACCCATAAATGTGGACTCTCAGC........................................................................2411.0010100000000
..............................ATATATTCCTCATTTGTGTATCTA................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................ACTCCGTAGATTTATCCCTGATTTT............................................2511.0010100000000
................................................................................................................................TAACAGCGATGGATGATTTATCGAT.............................................................................................................2511.0010000001000
.........................................................................................................................................................................................TCAGCCGAACTCCGTAGATTTATCCC...................................................2611.0010100000000
..................................................................................................................................................TATCGATTCCCAACCGGAAA................................................................................................2011.0010100000000
....................................................................................TAGCTACTTACAGCCAACAGCTAGT.........................................................................................................................................................2511.0010100000000
.................................................................................................................................................................................................ACTCCGTAGATTTATCCCTGATTT.............................................2411.0010100000000
...................................................................................................................................................................AAACACCCATAAATGTGGACTCTCAGCC.......................................................................2811.0011000000000
..............................................TGTATCTAACACTGCCCCTTGGCTATG.............................................................................................................................................................................................2711.0010100000000
.........................................................................................................................................................................................................................TTGGGATTAAGACCCAA-ACCTATC....................2460.3320000000200
droPer2
GCTTTTGAACCTTTCTCGTTTCTCTATAATATATATTCCTCATTTGTGTATCTAACACCGCCCCTTGGCTATGTGCCTATATAATAGCTACTTACAGCCAACAGCTAGTATAGAAACTAGTAATCTTTTAACAGCGATGGATGATTTATCGATTCCCAACCGGAAACACCCATAAATGTGGACTCTCAGCCGAACTCCGTAGATTTATCCCTGATTTTTGGGATTAAGACCCAA-ACCTATCCCGA---------GAGCAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droVir3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGTTTCAG---------GAGTAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
CCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAGATAAAAACCGAA-ATATGTCGGAG---------G------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGTCTTTGGAGTTGGAGCCAAAAATGAGCTAAAG---------AAGCTGCSizeHit CountTotal NormTotal
No Reads
droKik1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGTCCCGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCSizeHit CountTotal NormTotal
No Reads
droRho1
ACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCCGAACTCTATAGTCTTATAAACAGTTTTTAAGCTTT----------------------------------AGSizeHit CountTotal NormTotal
No Reads
droSec2
CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GATGTTT----------------------------------------------------------------------------------------------------------------------------------------TCGGATTAAGCCGCGACTGATAGAGCACATAATGGCGGACCTTCCCAAGGAGCCCTTGGAAGGATCTCACGCTTTTGAGGTTGCTGGGATA-GACTTCTGTGGACCCTTCTTTAACAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................TGATAGAGCACATAATGGCGGACC..............................................................................24201.2024016800000000
......................................................................................................................................................................................................TTGGAAGGATCTCACGCTTTTGAGG.......................................25200.8517040000000013
................................................................................................................................................................TGATAGAGCACATAATGGCGGACCT.............................................................................25200.30610500000000
...................................................................................................................................................................TAGAGCACATAATGGCGGACCTTC...........................................................................24200.25505000000000
.................................................................................................................................................................GATAGAGCACATAATGGCGGACCTTCC..........................................................................27200.25505000000000
........................................................................................................................................................................................................................................TA-GACTTCTGTGGACCCTTCTTTAA....2540.25101000000000
................................................................................................................................................................TGATAGAGCACATAATGGCGGACCTT............................................................................26200.25505000000000
.....................................................................................................................................................................................................................................GGATA-GACTTCTGTGGACCCTTCTTT......26100.20200000000002
........................................................................................................................................................................CACATAATGGCGGACCTTCCCAA.......................................................................23200.15300000000003
...................................................................................................................................................................TAGAGCACATAATGGCGGACCTTCC..........................................................................25200.15303000000000
...............................................................................................................................................TCGGATTAAGCCGCGACTGATAGAG..............................................................................................25160.13200000000002
...............................................................................................................................................TCGGATTAAGCCGCGACTGATAGAGCACATA........................................................................................31160.13200000000002
......................................................................................................................................................................................................TTGGAAGGATCTCACGCTTTTGAGGT......................................26200.10200100010000
.....................................................................................................................................................................................................................................GGATA-GACTTCTGTGGACCCTTCTT.......25100.10101000000000
...................................................................................................................................................................TAGAGCACATAATGGCGGACCTTCCC.........................................................................26200.10202000000000
................................................................................................................................................................................................................................TGCTGGGATA-GACTTCTGTGGACCC............25100.10101000000000
................................................................................................................................................................TGATAGAGCACATAATGGCGGACCC.............................................................................25200.10200200000000
...............................................................................................................................................................................................................................TTGCTGGGATA-GACTTCTGTGGAC..............24120.08100000100000
..............................................................................................................................................................ACTGATAGAGCACATAATGGCGGACCT.............................................................................27130.08101000000000
...................................................................................................................................................................TAGAGCACATAATGGCGGACCTTCCCAA.......................................................................28200.05100000010000
.........................................................................................................................................................................................................................................A-GACTTCTGTGGACCCTTCTT.......21200.05101000000000
................................................................................................................................................................TGATAGAGCACATAATGGCGGAC...............................................................................23200.05101000000000
................................................................................................................................................................TGATAGAGCACATAATGGCGGACCTTC...........................................................................27200.05101000000000
.......................................................................................................................................................................................................TGGAAGGATCTCACGCTTT............................................19200.05101000000000
................................................................................................................................................................TGATAGAGCACATAATGGCGGACA..............................................................................24200.05101000000000
...........................................................................................................................................................................ATAATGGCGGACCTTCCCAAGGA....................................................................23200.05101000000000
......................................................................................................................................................AAGCCGCGACTGATAGAGCACATAAT......................................................................................26200.05101000000000
.....................................................................................................................................................TAAGCCGCGACTGATAGAGCACATAA.......................................................................................26200.05101000000000
................................................................................................................................................................TGATAGAGCACATAATGGCGGACCTTCC..........................................................................28200.05100100000000
.........................................................................................................................................................................................................................................A-GACTTCTGTGGACCCTTCTTT......22200.05101000000000
droEre2
AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 01:49 AM