ID:

dps_1855

 Coordinate:

Unknown_group_200:6321-6471 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.5 -16.5

Flybase annnotation

CDS [Dpse\GA23997-cds]; exon [dpse_GLEANR_13540:1]; intron [Dpse\GA23997-in]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGGCGAATCGGGTACCGGCGTGGCTGCTAAGCAGAGCAAAATTTCGGCTGGTAAGCGCTCCGGGACCGAAGAACCCAAGGAAGCCCCGACAGGTAGCGTCTCTGCACCACGGAGAGAAAAGCCGTAGTACCAGGACGTGAGACGAGCGGCTTTCATCCTGGCCAACGTAGACCTTAGCTACAGGGCGTCAGGGCTATCACCTGCCAAGACGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTGGCTGCTCT
***************************************************************...................((............((((.(((.((.((((.........)))).))..)))))))........))******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M040
female body
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 M059
embryo
 M022
male body		 SRR902012
CNS imaginal disc
 GSM444067
head
...............................................................................................................................TACCAGGACGTGAGACGAGC........................................................................................................ 20 0 1 9.00 9 7 1 0 1 0 0 0 0 0
...............................................................................................................................TACCAGGACGTGAGACGAGCGGCT.................................................................................................... 24 0 1 4.00 4 3 1 0 0 0 0 0 0 0
........................................................................................................................GCCGTAGTACCAGGACGTGAGACGAG......................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGC...... 20 0 18 2.56 46 5 32 9 0 0 0 0 0 0
..................................................................................................................................CAGGACGTGAGACGAGCGGCTTT.................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTG.... 22 0 11 2.00 22 7 15 0 0 0 0 0 0 0
...............................................................GACCGAAGAACCCAAGGAAGCCC..................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................TACCAGGACGTGAGACGAGCGG...................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGC... 23 0 11 2.00 22 3 17 1 1 0 0 0 0 0
...............................................................................................................................TACCAGGACGTGAGACGAGCGGCTTT.................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCCTGGCCAACGTAGACCTTAGCTA....................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0
...............................................................................................................................TACCAGGACGTGAGACGAGCGGC..................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGG....... 19 0 20 1.90 38 10 22 5 0 1 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCT..... 21 0 11 1.09 12 3 9 0 0 0 0 0 0 0
..................................................................................................................................CAGGACGTGAGACGAGCGGCTTTCA................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................GCCGTAGTACCAGGACGTGAGACGAGC........................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TGAGACGAGCGGCTTTCATCCTGG.......................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................GCCAACGTAGACCTTAGCTACAGGGC................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................CGTCTCTGCACCACGGAGAGAAAAGCC................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................TACCAGGACGTGAAACGAGCGGCT.................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................GTAGACCTTAGCTACAGGGCGT............................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................CGTAGTACCAGGACGTGAGACGAGCGG...................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................TGCTAAGCAGAGCAAAATTTCGGC........................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................CGTAGTACCAGGACGTGAGACG........................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................CAGGACGTGAGACGAGCGGC..................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................TCGGCTGGTAAGCGCTCCGG............................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TATCACCTGCCAAGACGCTCGCTCTG............................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................CAGGACGTGAGACGAGCGGCT.................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................AGGACGTGAGACGAGCGGC..................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....GAATCGGGTACCGGCGTGG.................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCAAGACGCTCGCTCTGCGGC........................... 21 0 19 0.95 18 7 8 2 0 0 0 1 0 0
....................................................................................................................................................................................................................TCGGTCTGCGGCCCTCTACATGAAGGCGG.......... 29 1 16 0.88 14 14 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGACGCTCGCTCTGCGGCC.......................... 21 0 16 0.69 11 0 10 0 1 0 0 0 0 0
.........................................................................................................................................................CATACTGGCCAATGTAGCCC.............................................................................. 20 3 9 0.67 6 0 6 0 0 0 0 0 0 0
.....................................................................AGAACCCAAGGAAGCCCCGACA................................................................................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................CGGCTGGTAAGCGCTCCGGGA.......................................................................................................................................................................................... 21 0 4 0.50 2 0 1 0 1 0 0 0 0 0
............................................CGGCTGGTAAGCGCTCCGG............................................................................................................................................................................................ 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CATGATGGCGGGGGCTGCT.. 19 2 11 0.45 5 0 2 0 3 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCTC. 25 0 10 0.40 4 1 3 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCC.......................... 24 0 16 0.38 6 0 5 0 0 0 1 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTG.... 21 0 11 0.36 4 0 4 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCCTCTACATGAAGGCGGTGG....... 21 0 18 0.33 6 0 6 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTGCCAAGACGCTCGCTCTGC.............................. 21 0 20 0.30 6 0 5 0 1 0 0 0 0 0
.......................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTG............................... 21 0 20 0.30 6 0 5 0 0 0 0 0 0 1
.................................................................................................................................................................................................................CGCTCGCTCTGCGGCCCTCT...................... 20 0 17 0.29 5 0 5 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAAGGCGG.......... 25 0 18 0.28 5 2 2 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGC...... 19 0 18 0.28 5 0 4 1 0 0 0 0 0 0
..............................................................................................................................................................................................................AGACGCTCGCTCTGCGGCCC......................... 20 0 18 0.28 5 0 5 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTGC... 22 0 11 0.27 3 0 3 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTT.... 22 1 11 0.27 3 0 1 0 2 0 0 0 0 0
...................................................................................................................................AGGACGGGAGACGAGCGGC..................................................................................................... 19 1 20 0.25 5 0 0 5 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGACGCTCGCTCTGCGGCC.......................... 20 0 16 0.25 4 0 4 0 0 0 0 0 0 0
............................................CGGCTGGTAAGCGCTCCGGG........................................................................................................................................................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0
.GGCGAAACGAGTACCGGCGG...................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTC....................... 21 0 17 0.24 4 0 4 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACGCTCGCTCTGCGGCCCTCT...................... 21 0 17 0.24 4 1 3 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACGCTCGCTCTGCGGCCCTC....................... 20 0 17 0.24 4 0 4 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCT........................ 20 0 18 0.22 4 0 4 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGC........................... 23 0 19 0.21 4 1 3 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTG........ 18 0 20 0.20 4 1 2 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCT.. 24 0 10 0.20 2 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGGCGG.......... 29 0 16 0.19 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCT..... 20 0 11 0.18 2 0 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGA................ 23 0 17 0.18 3 0 3 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CCTCTACATGAAGGCGGTGGC...... 21 0 17 0.18 3 1 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAG.............. 25 0 17 0.18 3 0 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCTCGCTCTGCGGCCCTCTA..................... 20 0 18 0.17 3 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGACGCTCGCTCTGCGGCCCT........................ 21 0 18 0.17 3 0 3 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTAC.................... 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTCTACATGAAGGCGGTGG....... 19 1 20 0.15 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGG....... 18 0 20 0.15 3 0 2 1 0 0 0 0 0 0
...........................................................................................................................................................................................................CCAAGACGCTCGCTCTGCGG............................ 20 0 20 0.15 3 0 2 0 0 0 0 0 1 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCC......................... 25 0 16 0.13 2 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGG............. 26 0 17 0.12 2 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATG................. 23 0 17 0.12 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCCTCTACATGAAGGCGGTG........ 20 0 18 0.11 2 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGACGCTCGCTCTGCGGCC.......................... 19 0 18 0.11 2 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTTTACATGAAGGCGGTGGC...... 20 1 19 0.11 2 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGACGCTCGCTCTGCGGC........................... 19 0 19 0.11 2 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGC.............................. 22 0 20 0.10 2 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TACATGAAGGCGGTGGCTGCTC. 22 0 10 0.10 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTGCTC. 24 0 10 0.10 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GCCTACATGAAGGCGGTGGCTGCTC. 25 2 10 0.10 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCG............................. 21 0 20 0.10 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................CAGGACGGGAGACGAGCGGC..................................................................................................... 20 1 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CCTCTACATGAAGGCGGTGGCT..... 22 0 10 0.10 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CTCTGCGGCCCTCTACATGA................ 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGCGGCCCTCTACATGAAGG............. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTGCT.. 23 0 10 0.10 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTTTACATGAAGGCGGTGG....... 19 1 20 0.10 2 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGT... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCTT. 25 1 11 0.09 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCCTC....................... 27 0 15 0.07 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGTGG....... 26 0 16 0.06 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCCT........................ 26 0 16 0.06 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATGAAGGCGG.......... 30 0 16 0.06 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGACGCTCGCTCTGCGGCCA......................... 21 1 16 0.06 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGCGGCC.......................... 26 0 16 0.06 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGTG........ 25 0 16 0.06 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TACGCTCGCTGTGCGGCCCTCTACAT.................. 26 2 16 0.06 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGACGCTCGCTCTGCGGCCC......................... 21 0 16 0.06 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTACAT.................. 26 0 16 0.06 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGGCG........... 28 0 16 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGGTCTGCGGCCCTCTACATGAAGGC............ 27 1 17 0.06 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACGCTCGCTCTGCGGCCCTCTA..................... 22 0 17 0.06 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGACGCTCGCTCTGCGGCCCTCT...................... 23 0 17 0.06 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGCTCGCTCTGCGGCCCTCTA..................... 21 0 17 0.06 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTA..................... 23 0 17 0.06 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCCCTCTACATGAATGCGGTGG....... 24 1 17 0.06 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCCCTCTACATGAAGGCGGTGG....... 22 0 17 0.06 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTAC.................... 24 0 17 0.06 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATGAAG.............. 26 0 17 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATG................. 22 0 17 0.06 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGCTCGCTCTGCGGCCCTCTAC.................... 22 0 17 0.06 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCTGTGGC...... 20 1 18 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CCGCTCTGCGGCCCTCTACATGAAGGCGG.......... 29 1 18 0.06 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCCCTCTACATGAAGGCGG.......... 21 0 18 0.06 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGT......... 24 0 18 0.06 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGTGTCTCTACATGAAGGCGGTGGC...... 25 3 18 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTTTACATGAAG.............. 25 1 19 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGCGGCCCTCTACAAGAAGGCGG.......... 25 1 19 0.05 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAATGCGG.......... 25 1 19 0.05 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACAT.................. 22 0 19 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGCGGCCCTCTACATGAATGCGG.......... 24 1 19 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGCGGC........................... 25 0 19 0.05 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................ATGATGGCGGGGGCTGCT.. 18 2 19 0.05 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CCTCTACATGAAGGCGGTGG....... 20 0 19 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCCTCTACAAGAAGGCGGTGG....... 21 1 19 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGACGCTCGCTCTGCGGC........................... 20 0 19 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTGCCAAGACGCTCGCTCTGCGGC........................... 24 0 19 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACA................... 20 0 19 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAAGGC............ 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGC............ 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CATGATGGCGGGGGCTGC... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCGGCCCTCTACATGAAGGCG........... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCTGTGG....... 19 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGC.............................. 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCCAAGACGCTCGCTCTGCG............................. 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGAA...... 20 2 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGGCCCTCTACACGAAGGC............ 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCCTGCGGCCCTCTACATGA................ 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCAAGACGCTCGCTCTGCG............................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGG............................ 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGCGGCCCTCTACATGA................ 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCCAAGACGCTCGCTCTGCGT............................ 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................TAAGCAGGGTAAATTTTCG............................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGCGG............................ 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGCGGCCCTCTACAAGAAGGCG........... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTAC.................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................GAGACGAGCGGCTTTCATCC............................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGCTCTGCGGCCCTCTACA................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCCGCTTAGCCCATGGCCGCACCGACGATTCGTCTCGTTTTAAAGCCGACCATTCGCGAGGCCCTGGCTTCTTGGGTTCCTTCGGGGCTGTCCATCGCAGAGACGTGGTGCCTCTCTTTTCGGCATCATGGTCCTGCACTCTGCTCGCCGAAAGTAGGACCGGTTGCATCTGGAATCGATGTCCCGCAGTCCCGATAGTGGACGGTTCTGCGAGCGAGACGCCGGGAGATGTACTTCCGCCACCGACGAGA
********************************************************************************************************...................((............((((.(((.((.((((.........)))).))..)))))))........))*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 M059
embryo
 GSM444067
head
 SRR902012
CNS imaginal disc
 M062
head
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTACT................ 25 0 15 26.47 397 92 267 33 0 0 2 1 1 1
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATGTACT................ 27 0 14 16.29 228 9 194 17 7 1 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTACT................ 24 0 17 15.59 265 157 72 17 12 6 1 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGTACT................ 23 0 17 8.82 150 65 61 14 8 1 1 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATGTACT................ 28 0 14 6.71 94 2 77 15 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCCGGGAGATGTACT................ 21 0 20 5.70 114 62 21 27 0 3 1 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGATGTACT................ 26 0 14 3.64 51 33 13 1 4 0 0 0 0 0
.............................TCGTCTCGTTTTAAAGCCGACCAT...................................................................................................................................................................................................... 24 0 1 3.00 3 2 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTACTT............... 26 0 15 2.07 31 1 23 7 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACGCCGGGAGATGTACT................ 20 0 20 2.00 40 25 13 0 0 2 0 0 0 0
....................................................................................................................................................................TGCATCTGGAATCGATGTCCCGCAGT............................................................. 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0
.................................................................................TCGGGGCTGTCCATCGCAGAGACGT................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............................................................................CTTCGGGGCTGTCCATCGCAGAGACGT................................................................................................................................................. 27 0 1 2.00 2 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGTACT................ 22 0 20 1.60 32 19 9 4 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTAC................. 23 0 17 1.06 18 14 3 0 0 1 0 0 0 0
......................................................................................................................................................AAAGTAGGACCTGTTGCATCTGGAAT........................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................CGGGGCTGTCCATCGCAGAGACGT................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................AAAGTAGGACCGGTTGCATC................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTGGAATCGATGTCCCGCAGTCCCGAT....................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CCTGCACTCTGCTCGCCGAAAGT................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................TTCGTCTCGTTTTAAAGCCGACCAT...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................TCGTCTCGTTTTAAAGCCGACCATT..................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................TCGTCTCGTTTTAAAGCCGACCGT...................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TCCGCAGTCCCGATAGTGGACGGT............................................. 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................................TCGGGGCTGTCCATCGCAGAGACG.................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................CGAAAGTAGGACCGGTTGCAT.................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................TCCTTCGGGGCTGTCCATCGCAGAGAC................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................ATCGTCTCGTTTTAAAGCCGACCAT...................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................GTCTCGTTTTAAAGCCGACCAT...................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................CCATCGCAGAGACGTGGTGCCTCTCTT..................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGACGGTTCTGCGAGCGAGAC............................... 22 0 2 1.00 2 2 0 0 0 0 0 0 0 0
....................................................................................GGGCTGTCCATCGCAGAGACGTGG............................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................GTGCCTCTCTTTTCGGCATCATGGT....................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................GGGCTGTCCATCGCAGAGACGT................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATGT................... 24 0 16 0.94 15 2 9 3 1 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTAC................. 24 0 15 0.87 13 7 5 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATGTACTT............... 28 0 14 0.79 11 0 8 2 0 1 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATGTAC................. 26 0 14 0.71 10 2 8 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATGT................... 25 0 16 0.69 11 3 6 1 1 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTTCT................ 24 1 17 0.59 10 7 0 0 2 1 0 0 0 0
...................................................................................................................................................................................................................AAGCGAGACGCCGGGAGATGTACT................ 24 1 17 0.59 10 1 8 0 0 1 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTACTT............... 25 0 17 0.59 10 3 3 4 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGATGTAC................. 25 0 14 0.57 8 5 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGTGGACGGTTCTGCGAGCGAGACG.............................. 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................AGTGGACGGTTCTGCGAGCGAGACGC............................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................................GGTTCCTTCGGGGCTGTCCA............................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCCGGGAGATGTAC................. 20 0 20 0.50 10 5 4 1 0 0 0 0 0 0
.........................................................GAGGCCCTGGCTTCTTGGGT.............................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATGTACTT............... 29 0 14 0.50 7 0 5 1 1 0 0 0 0 0
......................................................................................................................................................................................................TGGACGGTTCTGCGAGCGAG................................. 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................GGACGGTTCTGCGAGCGAGACG.............................. 22 0 20 0.45 9 8 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................AGACGCCGGGAGATGTACT................ 19 0 20 0.45 9 7 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATGTAC................. 27 0 14 0.43 6 2 2 2 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGTAC................. 22 0 17 0.41 7 7 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGTAC................. 21 0 20 0.40 8 6 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACGCCGGGAGATGTACTT............... 21 0 20 0.40 8 5 2 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGTTCTGCGAGCGAGACGC............................. 20 0 20 0.40 8 8 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATG.................... 21 0 18 0.39 7 4 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGGAGATGTACT................ 29 0 14 0.36 5 0 5 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATGCGAGCGAGACGCCGGGAGATGTACT................ 28 1 14 0.36 5 0 5 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCAGGGAGATGTACTT............... 24 1 18 0.33 6 0 0 6 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCCAGACGCCGGGAGATGTACT................ 25 1 15 0.33 5 1 4 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGT................... 20 0 19 0.32 6 4 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACGGTTCTGCGAGCGAGACGC............................. 21 0 20 0.30 6 6 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGACGGTTCTGCGAGCGAGAC............................... 21 0 20 0.30 6 5 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCCGGGAGATGTACTT............... 22 0 20 0.30 6 2 2 2 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGACACGCCGGGAGATGTACT................ 23 1 17 0.29 5 5 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TAGCGAGACGCCGGGAGATGTACT................ 24 1 17 0.29 5 2 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTA.................. 23 0 17 0.29 5 2 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGAT..................... 20 0 18 0.28 5 3 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAGCGAGACGCCGGGAGATGTACT................ 28 1 15 0.27 4 1 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGTA.................. 21 0 19 0.26 5 3 1 0 1 0 0 0 0 0
.......................................................................................................................................AAACTCTGCTCGCCGAAAGT................................................................................................ 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGGTTCTGCGAGCGAGACGC............................. 22 0 20 0.25 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACGCCGGGAGATGTACTT............... 20 0 20 0.25 5 4 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGTA.................. 20 0 20 0.25 5 2 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGAGACGCCGGGAGATGTACT................ 21 1 20 0.25 5 5 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TCGATGTCCCGCAGTAGAGA........................................................ 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................GTTCTGCGAGCGAGACGCCGG.......................... 21 0 16 0.25 4 4 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGCGAGCGAGACGCCGGGAGATGTACT................ 27 1 14 0.21 3 1 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGATGTACTT............... 27 0 14 0.21 3 1 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCCAGACGCCGGGAGATGTACT................ 28 1 14 0.21 3 2 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................GCCGGGAGATGTACTTACGCC.......... 21 1 19 0.21 4 4 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGC............................. 19 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...........................................................................................................................................TCTGCTCGCCGAAAGTAGGAC........................................................................................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACGCCGGGAGATGTA.................. 18 0 20 0.20 4 1 1 2 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACGCCGGGAGATGTACTTC.............. 21 0 20 0.20 4 1 2 1 0 0 0 0 0 0
.................................................................................................................................................................................................................ACGAGCGAGACGCCGGGAGATGTACT................ 26 1 15 0.20 3 0 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTTCT................ 25 1 15 0.20 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACGGTTCTGCGAGCGAGACG.............................. 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.............................................................................................ATCGCAGAGACGTGGTGCCCCT........................................................................................................................................ 22 1 20 0.20 4 4 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGAGACGCCGGGAGATGTACT................ 21 1 20 0.20 4 4 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGGAGATGT................... 26 0 16 0.19 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGACACGCCGGGAGATGTACT................ 24 1 17 0.18 3 2 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGA...................... 21 0 17 0.18 3 2 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGTTCT................ 23 1 17 0.18 3 3 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGAT..................... 22 0 17 0.18 3 1 0 1 1 0 0 0 0 0
..................................................................................................................................................................................................................AGAGCGAGACGCCGGGAGATGTACT................ 25 1 18 0.17 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGT................... 21 0 19 0.16 3 2 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................CGCCGGGAGATGTACTTACGC........... 21 1 20 0.15 3 1 0 0 1 1 0 0 0 0
......................................................................................................................................................................................................................AAAGACGCCGGGAGATGTACT................ 21 2 20 0.15 3 2 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCCAGACGCCGGGAGATGTACT................ 22 1 20 0.15 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACGCCGGGAGATGTACTTCC............. 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCAGGGAGATGTACT................ 21 1 20 0.15 3 0 0 3 0 0 0 0 0 0
.........................................................................................................................................................................................................................GACGCCGGGAGATGTACTTCC............. 21 0 20 0.15 3 2 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................ACGCCGGGAGATGTACTTACG............ 21 1 20 0.15 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAGAGACGCCGGGAGATGTACT................ 22 2 20 0.15 3 2 0 0 1 0 0 0 0 0
............................................................................................................................................CTGCTCGCCGAAAGTAGGAC........................................................................................... 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGGTTCTGCGAGCGAGACGCC............................ 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACGCCGGGAGATGTAC................. 19 0 20 0.15 3 2 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................GGACGGTTCTGCGAGCGAGACGC............................. 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGACACGCCGGGAGATGTACT................ 26 1 14 0.14 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGACACGCCGGGAGATGTACT................ 25 1 15 0.13 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGCCGGGAG....................... 25 0 15 0.13 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TACGAGCGAGACGCCGGGAGATGTACT................ 27 1 15 0.13 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATGTA.................. 25 0 16 0.13 2 0 2 0 0 0 0 0 0 0
.......................................................................................................................................AAAATCTGCTCGCCGAAAGT................................................................................................ 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGAT..................... 21 0 17 0.12 2 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGAT..................... 23 0 17 0.12 2 0 0 0 2 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGA...................... 20 0 17 0.12 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCCAGACGCCGGGAGATGTACT................ 24 1 17 0.12 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGGAGAT..................... 24 0 17 0.12 2 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAG....................... 21 0 17 0.12 2 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGT................... 22 0 17 0.12 2 1 0 1 0 0 0 0 0 0
........................................................................TGGGTTACATCAGGGCTGT................................................................................................................................................................ 19 3 9 0.11 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGAAAGATGTACT................ 25 2 18 0.11 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AAAGCGAGACGCCGGGAGATGTACT................ 25 2 18 0.11 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAGCGAGACGCCGGGAGA...................... 22 1 18 0.11 2 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................AAAGAGACGCCGGGAGATGTACT................ 23 2 19 0.11 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACGGTTCTGCGAGCGAGAC............................... 19 0 20 0.10 2 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGAT..................... 19 0 20 0.10 2 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................CGGTTCTGCGAGCGAGACG.............................. 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCGGGAGATGTACTTACGCC.......... 20 1 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACG.............................. 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGTTCTGCGAGCGAGACGCC............................ 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGACGGTTCTGCGAGCGAGA................................ 20 0 20 0.10 2 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CCAGACGCCGGGAGATGTACT................ 21 1 20 0.10 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GACGCCGGGAGATGTACTTA.............. 20 1 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCCGGGAGATGTA.................. 19 0 20 0.10 2 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATG.................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGCC............................ 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGACGGTTCTGCGAGCGAG................................. 19 0 20 0.10 2 0 2 0 0 0 0 0 0 0
........................AGGATTTGTCTCGTTTTA................................................................................................................................................................................................................. 18 2 12 0.08 1 0 0 0 1 0 0 0 0 0
.......................................................................TTGGTTTCCATCGGGACTGT................................................................................................................................................................ 20 3 12 0.08 1 0 0 0 0 1 0 0 0 0
...............................................................CTGGCTGCTAGGGTTGCTTC........................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATGTTCT................ 27 1 14 0.07 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACACCGGGAGATGTACT................ 28 1 14 0.07 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCCAGACGCCGGGAGATGTACT................ 26 1 14 0.07 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGCGAGCGAGACGCCGGGAGATGTAC................. 26 1 14 0.07 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCTGCGAGCGAGACGCCGGGAGATGT................... 27 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGGTGTACT................ 26 1 14 0.07 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGACGTACT................ 27 1 14 0.07 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCCAGACGCCGGGAGATGTACT................ 27 1 14 0.07 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGTTCTGCGAGCGAGACGCCGGGAG....................... 26 0 15 0.07 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGGCGCCGGGAGATGTACT................ 27 1 15 0.07 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTTC................. 24 1 15 0.07 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAACGAGCGAGACGCCGGGAGATGTACT................ 28 3 15 0.07 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTTCTGCGAGCGAGACGCCGGGAG....................... 24 0 15 0.07 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATACGAGCGAGACGCCGGGAGATGTACT................ 28 2 15 0.07 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGGGACGCCGGGAGATGTACT................ 25 1 15 0.07 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGCCGGGA........................ 24 0 16 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCCGGGAGATGTACTTAC............. 28 1 16 0.06 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................GACGGTTCTGCGAGCGAGACGCCGGG......................... 26 0 16 0.06 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATGTAGT................ 28 1 16 0.06 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGTTCTGCGAGCGAGACGCCGGGA........................ 25 0 16 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCAGGGAGATGTACT................ 25 1 16 0.06 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGCCGG.......................... 22 0 16 0.06 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGCCGGG......................... 23 0 16 0.06 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCAGGGAGATGTACTT............... 26 1 16 0.06 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGTTCTGCGAGCGAGACGCCGG.......................... 23 0 16 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCGAGACGCAGGGAGATGTAC................. 24 1 16 0.06 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAGCGAGACGCCGGGAGATGT................... 23 0 16 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAGCCAGACGCCGGGAGATGT................... 22 1 17 0.06 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTTCTTC.............. 26 1 17 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GGAGCGAGACGCCGGGAGATGTACT................ 25 1 17 0.06 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATG.................... 24 0 17 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGAGGTACT................ 23 1 17 0.06 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGGAGA...................... 23 0 17 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGTACTT............... 24 0 17 0.06 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAGCGAGACGCCGGGAGATG.................... 23 0 17 0.06 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACGAGCGAGACGCCGGGAGATGTA.................. 24 1 17 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGACGTACT................ 23 1 17 0.06 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTACTTC.............. 26 0 17 0.06 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGAGGTACT................ 24 1 17 0.06 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGGAGATG.................... 25 0 17 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGACGGGAGATGTACT................ 23 1 17 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGATGTACC................ 23 1 17 0.06 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................ATTCTGCACGCCGAAAGTAG.............................................................................................. 20 2 18 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGACACTCCGGGAGATGTACT................ 23 2 18 0.06 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGAGCGAGACGCCGGGAGATGC................... 25 1 18 0.06 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCTGGAGATGTACT................ 24 1 18 0.06 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGAGAGACGCCGGGAGATGTACT................ 24 1 18 0.06 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGACAAGCCGGGAGATGTACT................ 24 2 18 0.06 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGGA........................ 21 0 18 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCAGGGAGATGTACT................ 23 1 18 0.06 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................TCTGCGAGCGAGACGCCGGG......................... 20 0 18 0.06 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCGCGCGAGACGCCGGGAGATGTACT................ 28 1 18 0.06 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGCGCGAGACGCCGGGAGATGTACT................ 27 1 18 0.06 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGAGAGACGCCGGGAGATGTACT................ 23 1 18 0.06 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGACGGTTCTGCGAGCGAGACGCCG........................... 25 1 19 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTGAGACGCCGGGAGATGTACT................ 23 2 19 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTA.................. 22 0 19 0.05 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCTGCGAGCGAGACGCCG........................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGATGTAGT................ 24 1 19 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCGGGAGATGTACTTCCGCCA......... 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCGCGAGACGCCGGGAGATGTACTT............... 26 1 19 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GACGCCGGGAGATGTACTT............... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGACGGTTCTGCGAGCGAGACGC............................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGAGACGCCGGGAGATGTAC................. 20 1 20 0.05 1 0 0 0 0 0 1 0 0 0
..........................................................................................................................................CTCTGCTCGCCGAAAGTAGGA............................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................CCCTCTGCTCGCCGAAAGT................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................AAATAGCGGACGGTTCTGCGAGCGAG................................. 26 3 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GCCGGGAGATGTACTTACGC........... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGACACGCCGGGAGATGTACT................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGTTCTGCGAGCGAGACG.............................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACGGTTCTGCGAGCGAGA................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTTCTGCGAGCGAGACGCC............................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATTTACT................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACGCCGGGAGATGTACTTCC............. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................................TCCTTTCGGCAGCATGGTCCTGCACT............................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................GGGGACGGTTCTGCGAGCGA.................................. 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGAGAGATGTACT................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGCGAGACGCCGGGAGA...................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGAGACGCCGGGAGAT..................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCCGGGAGATGTTCT................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCGACGCCGGGAGATGTACT................ 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACGCCGGGAGATGTACTG............... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCGGGAGATGTACTTACGCCA......... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGTTCTTCC............. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TACGGTTCTGCGAGCGAGACGCC............................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGACGGTTCTGCGAGCGAGACGCC............................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGGTTCTGCGAGCGAGACG.............................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................ATCGCAGAGACGTGGTGCCCCTC....................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GCCGGGAGATGTACTTACG............ 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AAGACGCCGGGAGATGTACT................ 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACGCCGGGAGATGTAC................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ACGAGACGCCGGGAGATGTACT................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACGGTTCTGCGAGCCAGAC............................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGT................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCGGGAGATGTACTTACGC........... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGAGATGTTCTTCCGCCACC....... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGCCGGGAGATGTACTTACGC........... 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGGTTCTGCGAGCGAGAC............................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGAGACGCCGGGAGGTGTAC................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGGTTCTGCGAGCGAG................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TGACGCCGGGAGATGTACTT............... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGTTCT................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCGAGACGCCGGGAGATGTACTT............... 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TCTGCTCGCCGAAAGTAGGA............................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACGAGCGTGAAGCCGGGAGAT..................... 21 3 20 0.05 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GACGCCGGGAGATGTACTTC.............. 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACGCCGGGAGATGTACTTCCGC........... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_200:6271-6521 - dps_1855 GGGCGAATC------------------GGGTAC--------CGGCGTGGCTGCT-----AAGCAGAGCAAAATTTCGGCTGGTAAGCGCTCCGGGACCG-AAGAACCCAAGGAAG-CCCCGACAGGTAG----------------------------------------------------------------------------------------------------------CGTCTCTGCACCACGGAGAGAAAAGCCGTAGTACCAGGACGTGAGACGAGCGGCTTTCATCCTGGCCAACGTAGACC------------------TTAGCTACAG---GGCGTCAGGGCTATCACCTGCCAAGACGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTGGCTGCTCT
droPer2 scaffold_137:76574-76785 + GGGCGAATC------------------GGGTAC--------CGGCGTGGCTGCT-----AAG--------------------------CTCCGGGACCG-AAGAACCCATGGAAG------------------------------------------------------------------------------------------------------------------------CGTCTCTGCACCACGGAGAGAAAAGCCGTAGTACCAGGACGTGAGACGAGCGGCTTTCATCCTGGCCAACGTAGACC------------------TTAGCTACAG---GGCGTCAGGGCTATCGCCTGCCAAGACGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTGGCTGCTCT
droMoj3 scaffold_6500:17457135-17457172 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATCTGTGGAACTCTACAAGAAGGCGGTTGCAAACGT
droGri2 scaffold_3018:5034-5122 - AAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------TGAACC------------------AAGGTACCAG---GGGCCGAATGTTATCGCCTGCCAAGATGCTCGCTCGGTAGAGCTTTATAAAGCTGCCGTAGCAGAGAT
droAna3 scaffold_13228:283368-283658 + AAGAAAGTC------------------CGGAAA--------TGGGATCATGGATCCGTCAAT--------------------------CTCCAAGGCAGACAAAGGCCAAAGAGA-CACTGGGATGGCGAAGCTCCCCACTGAGGGACAACGTCCGGAGGCGAGCTGCGCCGGTGTAGGGGGAGATGCAAAGGCACCGACCCCCAAATGAGCTACATGGGGGCTTCATGAAGGAGATGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCGGACTTCGAAGATGCAGGGTGGTACCAGGGTAGCA----------------TCAAGATGCGGGGTCTGTAGGCCTCTACATGCACATGATTGCGTCGCT
droBip1 scf7180000395326:35073-35323 - TGGAGAACGGAACTCCCTAAAAAAGGCCGGAGAGTCCGTACCAGGGTCAGTAACCCATCAAA--------------------------CTCCAAGGTCCTTAAAAGCCAAGGAGTTTGCTGAGATGGAGAAGCCCCCCACAGAGGGGCAACATCTGGAGGCGGGACACGCCGGTGCGGAGGAGGATGCAAAGG------------------------------------------------------------------------------------------------------------------A-----GATCGCGAAAAGGC---------------AGATATCAAGGTAATTGCCTGTCAAGACGCGTGATCAGTAGAAACCTACAAGCGAATGGTAGCACCGCT
droEle1 scf7180000490705:16595-16692 + AGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTC--CCCAGCCAACA----CCA-------------------TGCTGC-----AGCGTCAAAGTGGTGGCCTGCGATAGTCAGCGGTCGGCTAACCTATACAAGAAGGCGACAGCGCAGCT
droRho1 scf7180000773502:370-457 + AAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAACAAGAAGGTGCTCAG--------------------------------------------------------------------------------------------------------GCCTGGTGGTGGCCTGCGATAATCAGCGATCAGCTGACCTATATAAACAGGCGGTAGCTCAGCT
droBia1 scf7180000299137:14315-14365 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGCTGTAAGGACGAAAGACCGGCAGCGCTCTACAAGGCTGC-----CAGCAAC
droTak1 scf7180000415582:12958-13083 + AGTA--------------------------------CGCGAGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--CCGGTTCATCG----CCTTGCTGCATGGACGCGGGCTGGTACCAGGGCAGTGTAAAAGTGGTGGCCTGCGATGATCAGCGATCAGCTGACCTTTACAAACAGGCGGTAGCTCAGCT
droYak3 v2_chr2h_random_005:435121-435252 - TGCCAAGACGTG-------------------------------------------------------------------------------------------------------------------------------------------GTTCCAAGGCGA---------------------------------------------------------------------------------------------------------------------------------G--CCGGACCCCCT----CCTGTCTGCAAAGACG-----TGGTTCCAAGGCGGCGTCAAGGTGATCGCCTGTGACGATGAACGCTCTGCAAAGCTATACAAAGCCGCAGTAAAAGAGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGGCGAATC------------------GGGTAC--------CGGCGTGGCTGCT-----AAGCAGAGCAAAATTTCGGCTGGTAAGCGCTCCGGGACCG-AAGAACCCAAGGAAG-CCCCGACAGGTAG----------------------------------------------------------------------------------------------------------CGTCTCTGCACCACGGAGAGAAAAGCCGTAGTACCAGGACGTGAGACGAGCGGCTTTCATCCTGGCCAACGTAGACC------------------TTAGCTACAG---GGCGTCAGGGCTATCACCTGCCAAGACGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTGGCTGCTCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................TACCAGGACGTGAGACGAGC.............................................................................................................................2019.0090100001700
..........................................................................................................................................................................................................................................................................TACCAGGACGTGAGACGAGCGGCT.........................................................................................................................2414.0040100000300
...................................................................................................................................................................................................................................................................GCCGTAGTACCAGGACGTGAGACGAG..............................................................................................................................2613.0030000000300
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGC......20182.564603200000590
.............................................................................................................................................................................................................................................................................CAGGACGTGAGACGAGCGGCTTT.......................................................................................................................2312.0020000000200
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTG....22112.002201500000700
..............................................................................................GACCG-AAGAACCCAAGGAAG-CCC....................................................................................................................................................................................................................................................................................................2312.0020200000000
..........................................................................................................................................................................................................................................................................TACCAGGACGTGAGACGAGCGG...........................................................................................................................2212.0020000000200
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGC...23112.002201700001310
..........................................................................................................................................................................................................................................................................TACCAGGACGTGAGACGAGCGGCTTT.......................................................................................................................2612.0020000000200
......................................................................................................................................................................................................................................................................................................TCCTGGCCAACGTAGACC------------------TTAGCTA..........................................................................2512.0020000000020
..........................................................................................................................................................................................................................................................................TACCAGGACGTGAGACGAGCGGC..........................................................................................................................2312.0020000000200
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGG.......19201.9038022001001050
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCT.....21111.09120900000300
.............................................................................................................................................................................................................................................................................CAGGACGTGAGACGAGCGGCTTTCA.....................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................GCCGTAGTACCAGGACGTGAGACGAGC.............................................................................................................................2711.0010000000100
....................................................................................................................................................................................................................................................................................TGAGACGAGCGGCTTTCATCCTGG...............................................................................................................2411.0010000000100
...........................................................................................................................................................................................................................................................................................................GCCAACGTAGACC------------------TTAGCTACAG---GGC.................................................................2611.0010100000000
...........................................................................................................................................................................................................................................CGTCTCTGCACCACGGAGAGAAAAGCC.....................................................................................................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................................GTAGACC------------------TTAGCTACAG---GGCGT...............................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................CGTAGTACCAGGACGTGAGACGAGCGG...........................................................................................................................2711.0010000001000
..................................................TGCT-----AAGCAGAGCAAAATTTCGGC............................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................CGTAGTACCAGGACGTGAGACG................................................................................................................................2211.0010000000100
.............................................................................................................................................................................................................................................................................CAGGACGTGAGACGAGCGGC..........................................................................................................................2011.0010000000100
..........................................................................TCGGCTGGTAAGCGCTCCGG.............................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................TATCACCTGCCAAGACGCTCGCTCTG...............................2611.0010100000000
.............................................................................................................................................................................................................................................................................CAGGACGTGAGACGAGCGGCT.........................................................................................................................2111.0010000000100
..............................................................................................................................................................................................................................................................................AGGACGTGAGACGAGCGGC..........................................................................................................................1911.0010000000100
....GAATC------------------GGGTAC--------CGGCGTGG..........................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................CCAAGACGCTCGCTCTGCGGC...........................21190.95181800000720
............................................................................................................................................................................................................................................................................................................................................................................CAAGACGCTCGCTCTGCGGCC..........................21160.691101000001000
.....................................................................................................AGAACCCAAGGAAG-CCCCGACA...............................................................................................................................................................................................................................................................................................2220.5010100000000
...........................................................................CGGCTGGTAAGCGCTCCGGGA...........................................................................................................................................................................................................................................................................................................................2140.5020100001000
...........................................................................CGGCTGGTAAGCGCTCCGG.............................................................................................................................................................................................................................................................................................................................1940.5020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCTC.25100.4040300000100
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCC..........................24160.3860510000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTG....21110.3640400000000
...............................................................................................................................................................................................................................................................................................................................................................................................CCCTCTACATGAAGGCGGTGG.......21180.3360600000000
........................................................................................................................................................................................................................................................................................................................................................................CTGCCAAGACGCTCGCTCTGC..............................21200.3060500001000
.......................................................................................................................................................................................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTG...............................21200.3060500010000
.................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCTCTGCGGCCCTCT......................20170.2950500000000
........................................................................................................................................................................................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAAGGCGG..........25180.2850200000210
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGC......19180.2850400000010
..............................................................................................................................................................................................................................................................................................................................................................................AGACGCTCGCTCTGCGGCCC.........................20180.2850500000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTGC...22110.2730300000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTT....22110.2730100002000
.............................................................................................................................................................................................................................................................................................................................................................................AAGACGCTCGCTCTGCGGCC..........................20160.2540400000000
...........................................................................CGGCTGGTAAGCGCTCCGGG............................................................................................................................................................................................................................................................................................................................2040.2510100000000
...............................................................................................................................................................................................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTC.......................21170.2440400000000
................................................................................................................................................................................................................................................................................................................................................................................ACGCTCGCTCTGCGGCCCTCT......................21170.2440300000100
................................................................................................................................................................................................................................................................................................................................................................................ACGCTCGCTCTGCGGCCCTC.......................20170.2440400000000
...............................................................................................................................................................................................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCT........................20180.2240400000000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGC...........................23190.2140300000100
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTG........18200.2040200000110
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCT..24100.2020200000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGGCGG..........29160.1930000000300
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCT.....20110.1820100001000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGA................23170.1830300000000
................................................................................................................................................................................................................................................................................................................................................................................................CCTCTACATGAAGGCGGTGGC......21170.1830200000100
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAG..............25170.1830300000000
..................................................................................................................................................................................................................................................................................................................................................................................GCTCGCTCTGCGGCCCTCTA.....................20180.1730300000000
..............................................................................................................................................................................................................................................................................................................................................................................AGACGCTCGCTCTGCGGCCCT........................21180.1730300000000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTAC....................20200.1530000000300
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGG.......18200.1530200000010
...........................................................................................................................................................................................................................................................................................................................................................................CCAAGACGCTCGCTCTGCGG............................20200.1530200000001
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCC.........................25160.1320200000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGG.............26170.1220200000000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATG.................23170.1220200000000
...............................................................................................................................................................................................................................................................................................................................................................................................CCCTCTACATGAAGGCGGTG........20180.1120100000100
..............................................................................................................................................................................................................................................................................................................................................................................AGACGCTCGCTCTGCGGCC..........................19180.1120200000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGACGCTCGCTCTGCGGC...........................19190.1120200000000
.......................................................................................................................................................................................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGC..............................22200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................TACATGAAGGCGGTGGCTGCTC.22100.1010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTGCTC.24100.1010100000000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCG.............................21200.1020200000000
................................................................................................................................................................................................................................................................................................................................................................................................CCTCTACATGAAGGCGGTGGCT.....22100.1010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................CTCTGCGGCCCTCTACATGA................20200.1020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTGCGGCCCTCTACATGAAGG.............21200.1020000000200
..................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGAAGGCGGTGGCTGCT..23100.1010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGT...23110.0910000000100
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCTT.25110.0910100000000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCCTC.......................27150.0710100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGTGG.......26160.0610100000000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCCT........................26160.0610010000000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATGAAGGCGG..........30160.0610000000100
.............................................................................................................................................................................................................................................................................................................................................................................AAGACGCTCGCTCTGCGGCCA.........................21160.0610100000000
.......................................................................................................................................................................................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGCGGCC..........................26160.0610100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGTG........25160.0610100000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGACGCTCGCTCTGCGGCCC.........................21160.0610100000000
...............................................................................................................................................................................................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTACAT..................26160.0610000000010
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATGAAGGCG...........28160.0610100000000
................................................................................................................................................................................................................................................................................................................................................................................ACGCTCGCTCTGCGGCCCTCTA.....................22170.0610100000000
..............................................................................................................................................................................................................................................................................................................................................................................AGACGCTCGCTCTGCGGCCCTCT......................23170.0610100000000
.................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCTCTGCGGCCCTCTA.....................21170.0610100000000
...............................................................................................................................................................................................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTA.....................23170.0610100000000
..............................................................................................................................................................................................................................................................................................................................................................................................GCCCTCTACATGAAGGCGGTGG.......22170.0610100000000
...............................................................................................................................................................................................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTAC....................24170.0610000000010
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACATGAAG..............26170.0610100000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACATG.................22170.0610100000000
.................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCTCTGCGGCCCTCTAC....................22170.0610100000000
............................................................................................................................................................................................................................................................................................................................................................................................CGGCCCTCTACATGAAGGCGG..........21180.0610100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGCGGT.........24180.0610100000000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGCGGCCCTCTACAT..................22190.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGCGGC...........................25190.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................CCTCTACATGAAGGCGGTGG.......20190.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................CAAGACGCTCGCTCTGCGGC...........................20190.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................CTGCCAAGACGCTCGCTCTGCGGC...........................24190.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTACA...................20190.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................TCTGCGGCCCTCTACATGAAGGC............23200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGCGGCCCTCTACATGAAGGC............21200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCGGCCCTCTACATGAAGGCG...........21200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGC..............................20200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................GCCAAGACGCTCGCTCTGCG.............................20200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGAA......20200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................CCAAGACGCTCGCTCTGCG.............................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGG............................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................TCTGCGGCCCTCTACATGA................19200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................GCCAAGACGCTCGCTCTGCGT............................21200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................CCTGCCAAGACGCTCGCTCTGCGG............................24200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGCGGCCCTCTAC....................19200.0510100000000
.....................................................................................................................................................................................................................................................................................GAGACGAGCGGCTTTCATCC..................................................................................................................20200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CGCTCTGCGGCCCTCTACA...................19200.0510100000000
droPer2
GGGCGAATC------------------GGGTAC--------CGGCGTGGCTGCT-----AAG--------------------------CTCCGGGACCG-AAGAACCCATGGAAG------------------------------------------------------------------------------------------------------------------------CGTCTCTGCACCACGGAGAGAAAAGCCGTAGTACCAGGACGTGAGACGAGCGGCTTTCATCCTGGCCAACGTAGACC------------------TTAGCTACAG---GGCGTCAGGGCTATCGCCTGCCAAGACGCTCGCTCTGCGGCCCTCTACATGAAGGCGGTGGCTGCTCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................ACAG---GGCGTCAGGGCTATCGCCTGCCA.............................................2711.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTG....22180.173030000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCT.....21180.112010001
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTGGCTGCT..24140.071010000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCC.........................25200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCTACATGAAGGCGGTG........18200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................GACGCTCGCTCTGCGGCCCTCTACATG.................27200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACGCTCGCTCTGCGGCCCT........................26200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................ACATGAAGGCGGTGGCTG....18200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................GCCCTCTACATGAAGGCGGTGGC......23200.051010000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATCTGTGGAACTCTACAAGAAGGCGGTTGCAAACGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------TGAACC------------------AAGGTACCAG---GGGCCGAATGTTATCGCCTGCCAAGATGCTCGCTCGGTAGAGCTTTATAAAGCTGCCGTAGCAGAGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGCTCGCTCGGTAGAGCT........................26200.20404
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCGGTAGAGCTTTATAAAGCT..............25200.05101
............................................................................................................................................................................................................................................................................................................................................................................................TAGAGCTTTATAAAGCTGCCGTAGCAG....27200.05101
droAna3
AAGAAAGTC------------------CGGAAA--------TGGGATCATGGATCCGTCAAT--------------------------CTCCAAGGCAGACAAAGGCCAAAGAGA-CACTGGGATGGCGAAGCTCCCCACTGAGGGACAACGTCCGGAGGCGAGCTGCGCCGGTGTAGGGGGAGATGCAAAGGCACCGACCCCCAAATGAGCTACATGGGGGCTTCATGAAGGAGATGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCGGACTTCGAAGATGCAGGGTGGTACCAGGGTAGCA----------------TCAAGATGCGGGGTCTGTAGGCCTCTACATGCACATGATTGCGTCGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................AACGTCCGGAGGCGAGCTGCGC.................................................................................................................................................................................................................................................22202.05413830000
.........................................................................................................GCCAAAGAGA-CACTGGGATGGCGAAG.......................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................GCTTCATGAAGGAGATGCTCAA--GAAC-------------------------------------------.......................................................................................................................2611.001100000
....................................................................................................................................................AACGTCCGGAGGCGAGCTGCGCCG...............................................................................................................................................................................................................................................24201.00202000000
...................................................................................................................................................................................GGGAGATGCAAAGGCACCGACC..................................................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................................................................................................................TTCGAAGATGCAGGGTGGTACCAGG......................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................................................................................GTAGCA----------------TCAAGATGCGGGGTCTGT..............................2411.001100000
....................................................................................................................................................AACGTCCGGAGGCGAGCTGCGCCGG..............................................................................................................................................................................................................................................25200.408800000
.....................................................................................................................................................ACGTCCGGAGGCGAGCTGCGC.................................................................................................................................................................................................................................................21200.255500000
.............................................................................................................................................................................................................................GCTTCATGAAGGAGATGCTCAA--GA....................................................................................................................................................................2450.201100000
....................................................................................................................................................AACGTCCGGAGGCGAGCTGCGCCGGT.............................................................................................................................................................................................................................................26200.153300000
...................................................GATCCGTCAAT--------------------------CTCCAAGGCAG........................................................................................................................................................................................................................................................................................................................22200.153300000
.....................................................................................................................................TCCCCACTGAGGGACAACGTCCGGA.............................................................................................................................................................................................................................................................25200.102200000
....................................................ATCCGTCAAT--------------------------CTCCAAGGCAG........................................................................................................................................................................................................................................................................................................................21200.102200000
............................................................................................................................................TGAGGGACAACGTCCGGAGGCGA........................................................................................................................................................................................................................................................23200.102200000
....................................................................................................................................................AACGTCCGGAGGCGAGCTGCGCCGGTG............................................................................................................................................................................................................................................27200.102200000
.....................................................................................................................................................................TGCGCCGGTGTAGGGGGAGATG................................................................................................................................................................................................................................22200.102200000
.....................................................................................................................................................ACGTCCGGAGGCGAGCTGCGCCGG..............................................................................................................................................................................................................................................24200.102200000
...................................................................................................................................GCTCCCCACTGAGGGACAACGTCCGG..............................................................................................................................................................................................................................................................26200.102200000
......................................................................................................................................................................................................................................................................................................................................CAGGGTGGTACCAGGGTAGCA----------------TC..............................................23200.102200000
.............................................................................................................................................GAGGGACAACGTCCGGAGGCGAGC......................................................................................................................................................................................................................................................24200.102200000
.................................................TGGATCCGTCAAT--------------------------CTCCAAGGCAGAC......................................................................................................................................................................................................................................................................................................................26200.102020000
....................................................................................................................................................AACGTCCGGAGGCGAGCTG....................................................................................................................................................................................................................................................19200.102200000
.....................................................TCCGTCAAT--------------------------CTCCAAGGCAGACA.....................................................................................................................................................................................................................................................................................................................23200.102200000
............................................GATCATGGATCCGTCAAT--------------------------CTC................................................................................................................................................................................................................................................................................................................................21200.102200000
.....................................................................................................................................TCCCCACTGAGGGACAACGTCCGGAG............................................................................................................................................................................................................................................................26200.102200000
...........................................................................................................................................................................................................................................ATGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCGG.................................................................................................28150.071100000
...............................................................................................................................................................................................................................................TCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCGG.................................................................................................24160.061100000
............................................................................................................................................................................................................................................TGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCGG.................................................................................................27160.061100000
................................................................................................................................................................................................................................................CAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCGGA................................................................................................24160.061100000
............................................................................................................................................................................................................................................TGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CCG..................................................................................................26170.061100000
.........................................................................................................................................................................................................................................AGATGCTCAA--GAAC-------------------------------------------G--GAGGACCTC...........................................................................................................24180.061100000
..............................................................................................................................................................................................................................................CTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----CC...................................................................................................23190.051100000
...........................................................................................................................................................................................................................................ATGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----C....................................................................................................25190.051100000
..........................................................................................................................................ACTGAGGGACAACGTCCGGAGGCGAGC......................................................................................................................................................................................................................................................27200.051100000
............................................................................................................................................................................................................................................TGCTCAA--GAAC-------------------------------------------G--GAGGACCTCCA----C....................................................................................................24200.051100000
............................................................................................................................................TGAGGGACAACGTCCGGAGGCGT........................................................................................................................................................................................................................................................23200.051100000
......................................................................................................................................................CGTCCGGAGGCGAGCTGCG..................................................................................................................................................................................................................................................19200.051100000
.................................................................................................................................................GACAACGTCCGGAGGCGAGCTGCGCC................................................................................................................................................................................................................................................26200.051010000
................................................ATGGATCCGTCAAT--------------------------CTCCAAG............................................................................................................................................................................................................................................................................................................................21200.051100000
...........................................................................................................................................CTGAGGGACAACGTCCGGAGG...........................................................................................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................................................................................................................................CAGGGTGGTACCAGGGTAGC.................................................................20200.051100000
................................................................................................................................................................CGAGCTGCGCCGGTGTAGGGGGAG...................................................................................................................................................................................................................................24200.051100000
..................................................................................................................................AGCTCCCCACTGAGGGACAACGTCCGGA.............................................................................................................................................................................................................................................................28200.051100000
........................................................GTCAAT--------------------------CTCCAAGGCAGAC......................................................................................................................................................................................................................................................................................................................19200.051100000
.....AGTC------------------CGGAAA--------TGGGATCATGGATCC...................................................................................................................................................................................................................................................................................................................................................................25200.051000001
......................................................................................................................................CCCCACTGAGGGACAACGTCCGGA.............................................................................................................................................................................................................................................................24200.051100000
....................................................................................................................................................AACGTCCGGAGGCGAGCTGCGCCGT..............................................................................................................................................................................................................................................25200.051100000
.......TC------------------CGGAAA--------TGGGATCATGGATCC...................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................................................................................................................CACTGAGGGACAACGTCCGGAG............................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................................................................TGCGCCGGTGTAGGGGGAGAT.................................................................................................................................................................................................................................21200.051010000
...................................................GATCCGTCAAT--------------------------CTCCAAGGCAGACA.....................................................................................................................................................................................................................................................................................................................25200.051100000
.......................................................................................................................................................GTCCGGAGGCGAGCTGCGCCGG..............................................................................................................................................................................................................................................22200.051100000
......................................................................................................................................................................................................................................................................................................................................CAGGGTGGTACCAGGGTAGCA----------------T...............................................22200.051100000
.................................................TGGATCCGTCAAT--------------------------CTCCAAGGCAGACA.....................................................................................................................................................................................................................................................................................................................27200.051100000
....................................................................................................................................CTCCCCACTGAGGGACAACGTCCGGA.............................................................................................................................................................................................................................................................26200.051100000
.........................................................................................................................................................................................................................................AGATGCTCAA--GAAC-------------------------------------------G--GAGGACCT............................................................................................................23200.051010000
............................GGAAA--------TGGGATCATGGATCCGC.................................................................................................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................................................GCTCCCCACTGAGGGACAACGTCCGGA.............................................................................................................................................................................................................................................................27200.051010000
.....................................................................................................................................TCCCCACTGAGGGACAACGTCCGGAA............................................................................................................................................................................................................................................................26200.051100000
...................................................GATCCGTCAAT--------------------------CTCCAAGG...........................................................................................................................................................................................................................................................................................................................19200.051010000
........C------------------CGGAAA--------TGGGATCATGGATCC...................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................................................................................................................................CGAGCTGCGCCGGTGTAGG........................................................................................................................................................................................................................................19200.051100000
.......................................................................................................................................CCCACTGAGGGACAACGTCCGGAG............................................................................................................................................................................................................................................................24200.051100000
droBip1
TGGAGAACGGAACTCCCTAAAAAAGGCCGGAGAGTCCGTACCAGGGTCAGTAACCCATCAAA--------------------------CTCCAAGGTCCTTAAAAGCCAAGGAGTTTGCTGAGATGGAGAAGCCCCCCACAGAGGGGCAACATCTGGAGGCGGGACACGCCGGTGCGGAGGAGGATGCAAAGG------------------------------------------------------------------------------------------------------------------A-----GATCGCGAAAAGGC---------------AGATATCAAGGTAATTGCCTGTCAAGACGCGTGATCAGTAGAAACCTACAAGCGAATGGTAGCACCGCTSizeHit CountTotal NormTotal
No Reads
droEle1
AGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTTC--CCCAGCCAACA----CCA-------------------TGCTGC-----AGCGTCAAAGTGGTGGCCTGCGATAGTCAGCGGTCGGCTAACCTATACAAGAAGGCGACAGCGCAGCTSizeHit CountTotal NormTotal
No Reads
droRho1
AAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAACAAGAAGGTGCTCAG--------------------------------------------------------------------------------------------------------GCCTGGTGGTGGCCTGCGATAATCAGCGATCAGCTGACCTATATAAACAGGCGGTAGCTCAGCTSizeHit CountTotal NormTotal
No Reads
droBia1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGCTGTAAGGACGAAAGACCGGCAGCGCTCTACAAGGCTGC-----CAGCAACSizeHit CountTotal NormTotal
No Reads
droTak1
AGTA--------------------------------CGCGAGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--CCGGTTCATCG----CCTTGCTGCATGGACGCGGGCTGGTACCAGGGCAGTGTAAAAGTGGTGGCCTGCGATGATCAGCGATCAGCTGACCTTTACAAACAGGCGGTAGCTCAGCTSizeHit CountTotal NormTotal
No Reads
droYak3
TGCCAAGACGTG-------------------------------------------------------------------------------------------------------------------------------------------GTTCCAAGGCGA---------------------------------------------------------------------------------------------------------------------------------G--CCGGACCCCCT----CCTGTCTGCAAAGACG-----TGGTTCCAAGGCGGCGTCAAGGTGATCGCCTGTGACGATGAACGCTCTGCAAAGCTATACAAAGCCGCAGTAAAAGAGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................TCTGCAAAGACG-----TGGTTCCAAGGCGG..................................................................2620.50101000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGACGATGAACGCTCTGCAAAGCTA.......................2520.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................TCGCCTGTGACGATGAACGCTCTGCA.............................2630.33101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AGCTATACAAAGCCGCAGTAAAAGAGC.2790.22202000000000
................................................................................................................................................................................................................................................................................................................................................................GTGATCGCCTGTGACGATGAACGCC..................................25180.06100100000000
...........................................................................................................................................................................................................................................................................................................................................TGGTTCCAAGGCGGCGTCAAGG..........................................................22200.05101000000000

Generated: 05/18/2015 at 01:48 AM