ID:

dps_18

 Coordinate:

4_group4:3552042-3552102 +

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.5 -26.4 -26.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CAATCCAATCAATAATAAAAAGTTTTTGCATCTAATTTACGTTCGTGCTATGTAGTCCCCAGGAGTATATTATGGTATTTTCTAATTCATAATGCTGTTGTTGACTACAAAGTAAGATGTGAGTACTCCACAAAGAATGATTAAATGAAAATTAAGCAAAC

***********************************.(((((((..((((.(((((((..(((.(((((..(((((.(((....))))))))))))).)))..))))))).)))).)))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 M022

male body		 V112

male body		 M040

female body

 GSM444067

head

 SRR902012

CNS imaginal disc

 GSM343916

embryo

 M062

head

 SRR902010

ovaries
.........................................................................................TAATGCTGTTGTTGACTACAAA.................................................. 22 0 1 836.00 836 757 14 42 15 2 3 0 0 3
.........................................................................................TAATGCTGTTGTTGACTACAA................................................... 21 0 1 549.00 549 448 54 14 26 0 4 1 0 2
.........................................................................................TAATGCTGTTGTTGACTACA.................................................... 20 0 1 329.00 329 213 49 30 32 0 2 2 1 0
.........................................................................................TAATGCTGTTGTTGACTACAAAA................................................. 23 1 1 243.00 243 225 5 9 4 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAA................................................ 24 2 1 92.00 92 83 0 7 1 0 0 0 1 0
..................................................TGTAGTCCCCAGGAGTATATTATG....................................................................................... 24 0 1 81.00 81 32 0 42 3 4 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAC..................................................... 19 0 1 58.00 58 47 3 1 5 0 0 0 2 0
.........................................................................................TAATGCTGTTGTTGACTGCA.................................................... 20 1 1 52.00 52 0 49 0 2 1 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAA.................................................... 20 1 1 44.00 44 27 2 13 2 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCCC.................................................. 22 3 1 38.00 38 33 0 2 2 1 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAA..................................................... 19 1 1 37.00 37 23 4 6 1 3 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAAA............................................... 25 2 1 28.00 28 27 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACC.................................................... 20 1 1 25.00 25 20 3 1 1 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCC................................................... 21 2 1 25.00 25 25 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACG.................................................... 20 1 1 19.00 19 17 1 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGC..................................................... 19 1 1 16.00 16 0 10 1 5 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAT..................................................... 19 1 1 15.00 15 14 0 0 1 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAA................................................... 21 1 1 14.00 14 13 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGCAA................................................... 21 1 1 10.00 10 0 8 0 2 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAT................................................. 23 1 1 9.00 9 8 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAAA.................................................. 22 1 1 9.00 9 9 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTA...................................................... 18 0 1 8.00 8 5 2 0 0 1 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTC................................................... 21 2 1 8.00 8 8 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAAA.................................................. 21 0 1 8.00 8 4 0 0 4 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAG................................................. 23 0 1 8.00 8 6 1 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCT................................................... 21 2 1 7.00 7 6 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGCAAA.................................................. 22 1 1 6.00 6 0 3 2 1 0 0 0 0 0
...........................................................................TATTTTCTAATTCATAA..................................................................... 17 0 2 5.50 11 11 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAC.................................................. 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATT.................................................... 20 2 2 5.00 10 10 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAAAA................................................. 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTG...................................................... 18 1 2 4.50 9 0 3 1 0 5 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAATCT............................................... 25 3 1 4.00 4 4 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACCACAAAAA................................................ 24 3 1 4.00 4 4 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTCC.................................................. 22 3 1 4.00 4 4 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAA................................................... 20 0 1 3.00 3 0 1 0 2 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAAGA.............................................. 26 3 1 3.00 3 3 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTATGGTA.................................................................................... 27 0 1 3.00 3 1 0 1 0 1 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACA.................................................... 19 0 1 3.00 3 0 0 0 3 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAT................................................ 24 1 1 3.00 3 3 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTATGGT..................................................................................... 26 0 1 3.00 3 0 0 3 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCCT.................................................. 22 3 2 2.50 5 5 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTAT........................................................................................ 23 0 1 2.00 2 1 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTCCC.................................................... 20 2 1 2.00 2 1 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATTCTGTTGTTGACTACAAA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAATTC.............................................. 26 3 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAATT................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCTC.................................................. 22 3 2 2.00 4 3 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAC................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACT....................................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTATGG...................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAAAA.............................................. 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTAT.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCCA.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCAA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGAATACAAA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACT.................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTAA........................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATT.......................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAC................................................ 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTATGA...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAAAAAAA.............................................. 26 3 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCTT.................................................. 22 3 2 1.50 3 2 0 0 1 0 0 0 0 0
.............................................................................TTTTCTAATTCATAA..................................................................... 15 0 3 1.33 4 4 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTAGACTGCA.................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTAACTACAAAAA................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATCA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAACC................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAATA................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................GTAGTCCCCAGGAGTATATTATGGTAT................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAAGGCTGTTGTTGACTACAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGCGTTTATTATG....................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0
.........................................................................................TAATGCTGTTGTTGACTGCAT................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................TCTAATTCATAATGCTGTTGTTGAC........................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGAATATTATG....................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACATTT................................................. 23 3 2 1.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAG................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAACCC................................................ 24 3 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................TGTAGTCCCCAGGAGTATATTATA....................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGGGTATATTATG....................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................CTAATGCTGTTGTTGACTACAAAA................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACGACAAA.................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATG.................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTATTGTTGACTACAAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................TGCTGTTGTTGACTACAAA.................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTCT.................................................. 22 3 3 1.00 3 3 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTTC..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACCACAAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCG................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTGCAA................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACATT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAATC............................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAAT............................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCCGTTGTTGACTACAAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................TAATTCATAATGCTGTTGTTGACT....................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................AAATGCTGTTGTTGACTACAA................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATAT........................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAATC................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................TCTAATTCATAATGCTGTTGTTGACT....................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAAAAAA............................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGGTGACTACC.................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAAAT................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAAAAA................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTCGTTGACTACAAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAGA................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAAAT................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGCAAAA................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAATAA.............................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTATTGACTAAAA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAAAAA............................................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTATGTCA.................................................................................... 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTAAA................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCCTGT................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAAAAA................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAAAAA................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAG..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................ATGTAGTCCCCAGGAGTATATTATG....................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACTTAA................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAAAAG............................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTCACTACAA................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................TATGTAGTCCCCAGGAGTATATT.......................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.........................................................................................TAATGCTGTTGTCGACTACA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAAAAAA............................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................ATGCTGTTGTTGACTACAAAG................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACAAAG................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAATC................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAAATTCTG............................................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................ATGCTGTTGTTGACTACAA................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................TCATAATGCTGTTGTTGACT....................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATA............................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACCTG.................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATC.................................................... 20 2 2 1.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTC...................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGACTACTCAA................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAG................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGAAA................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................................................................TTCTAATTCATAATGCTGTTGTTGA......................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TGTAGTCCCCAGGAGTATATTATGT...................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................TATTTTCTAATTCATAATGCTGTTGT............................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATAT................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTACAACAA................................................ 24 3 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTGGACTGCAA................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAG.................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGAA.................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0
................................................................................TGTAATTCATAATGCTGTTG............................................................. 20 1 2 0.50 1 0 0 0 0 1 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGCCT................................................... 21 3 8 0.38 3 0 2 1 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATCC................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGTA.................................................... 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0
..........................................................................................AATGCTGTTGTTGATTACAAAA................................................. 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTTCT.................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTTT..................................................... 19 2 7 0.29 2 2 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTATCG................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGA..................................................... 19 2 5 0.20 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTAAATT.................................................. 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................................AATCATAATGCTGTTGGTGTC........................................................ 21 3 6 0.17 1 0 0 0 1 0 0 0 0 0
.........................................................................................TAATGCTGTTGTTGACTGCCC................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0
...................................................................................AACTAATAATGCTGTTGTT........................................................... 19 2 11 0.09 1 0 0 0 1 0 0 0 0 0
..........................................................................................................ACACAGTAAGTTGTGAGGA.................................... 19 3 13 0.08 1 0 0 0 0 0 0 1 0 0
.........................................................................................TAATGCTGTTGTTGACTTTTA................................................... 21 3 14 0.07 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTAGGTTAGTTATTATTTTTCAAAAACGTAGATTAAATGCAAGCACGATACATCAGGGGTCCTCATATAATACCATAAAAGATTAAGTATTACGACAACAACTGATGTTTCATTCTACACTCATGAGGTGTTTCTTACTAATTTACTTTTAATTCGTTTG

***********************************.(((((((..((((.(((((((..(((.(((((..(((((.(((....))))))))))))).)))..))))))).)))).)))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 SRR902011

testis
.................................................TATATCAGGGTTCCTCATATAA.......................................................................................... 22 2 1 1.00 1 1 0
..................................AAAATGCAAGCACGATACATCAGGGG..................................................................................................... 26 1 1 1.00 1 0 1
.....................................................TCAGGGTTCCTCATATAAGATC...................................................................................... 22 3 2 0.50 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 4_group4:3551992-3552152 + dps_18 confident CAATCCAAT-CAATAATAAAAAGTTTTTGCATCTAATTTACGTTCGTGCTATGTAGTCCCCAGGAGTATATTATGGTATTTTCTAATTCATAATGCTGTTGTTGACTACAAAGTAAGATGTGAGTACTCCACAAAGAATGATTAAATGAAAATTAAGCAAAC
droPer2 scaffold_10:2579840-2580001 + dpe_273 confident CAATCCAATCCAATAATAAAAAGTTTTTGCATCTAATTTAAGTTCGTGCTATGTAGTCCCCAGGAGTATATTATGGTATTTTCTAATTCATAATGCTGTTGTTGACTGCAAAGTAAGATGTGAGTACTCCACAAAGAATGATTAAATGAAAATTAAGCAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAATCCAAT-CAATAATAAAAAGTTTTTGCATCTAATTTACGTTCGTGCTATGTAGTCCCCAGGAGTATATTATGGTATTTTCTAATTCATAATGCTGTTGTTGACTACAAAGTAAGATGTGAGTACTCCACAAAGAATGATTAAATGAAAATTAAGCAAACSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................TAATGCTGTTGTTGACTACAAA..................................................221836.00836141500024237573
..........................................................................................TAATGCTGTTGTTGACTACAA...................................................211549.00549542600101424484
..........................................................................................TAATGCTGTTGTTGACTACA....................................................201329.00329493201203002132
..........................................................................................TAATGCTGTTGTTGACTACAAAA.................................................231243.00243540000902250
..........................................................................................TAATGCTGTTGTTGACTACAAAAA................................................24192.009201010070830
...................................................TGTAGTCCCCAGGAGTATATTATG.......................................................................................24181.0081030004420320
..........................................................................................TAATGCTGTTGTTGACTAC.....................................................19158.005835020010470
..........................................................................................TAATGCTGTTGTTGACTACCCC..................................................22138.003802000120330
..........................................................................................TAATGCTGTTGTTGACTAA.....................................................19137.003741000360230
..........................................................................................TAATGCTGTTGTTGACTACC....................................................20125.002531000010200
..........................................................................................TAATGCTGTTGTTGACTACCC...................................................21125.002500000000250
..........................................................................................TAATGCTGTTGTTGACTACG....................................................20119.001910000010170
..........................................................................................TAATGCTGTTGTTGACTAT.....................................................19115.001501000000140
..........................................................................................TAATGCTGTTGTTGACTACAAAT.................................................2319.0091000000080
..........................................................................................TAATGCTGTTGTTGACTA......................................................1818.0082000010050
..........................................................................................TAATGCTGTTGTTGACTACTC...................................................2118.0080000000080
...........................................................................................AATGCTGTTGTTGACTACAAA..................................................2118.0080400000040
..........................................................................................TAATGCTGTTGTTGACTACAAAG.................................................2318.0081000001060
..........................................................................................TAATGCTGTTGTTGACTACCT...................................................2117.0071000000060
............................................................................TATTTTCTAATTCATAA.....................................................................1725.501100000000110
..........................................................................................TAATGCTGTTGTTGACTACAAC..................................................2215.0050000000050
..........................................................................................TAATGCTGTTGTTGACTATT....................................................2025.001000000000100
...........................................................................................AATGCTGTTGTTGACTACAAAA.................................................2215.0050000000050
..........................................................................................TAATGCTGTTGTTGACTG......................................................1824.5093000051000
..........................................................................................TAATGCTGTTGTTGACTACAAATCT...............................................2514.0040000000040
..........................................................................................TAATGCTGTTGTTGACTACTCC..................................................2214.0040000000040
...........................................................................................AATGCTGTTGTTGACTACAA...................................................2013.0031200000000
...................................................TGTAGTCCCCAGGAGTATATTATGGTA....................................................................................2713.0030000011010
...........................................................................................AATGCTGTTGTTGACTACA....................................................1913.0030300000000
...................................................TGTAGTCCCCAGGAGTATATTATGGT.....................................................................................2613.0030000003000
..........................................................................................TAATGCTGTTGTTGACTACCCT..................................................2222.5050000000050
...................................................TGTAGTCCCCAGGAGTATATTAT........................................................................................2312.0020000001010
..........................................................................................TAATGCTGTTGTTGACTACTT...................................................2112.0020000000020
..........................................................................................TAATGCTGTTGTTGACTACAATT.................................................2312.0020000000020
..........................................................................................TAATGCTGTTGTTGACTACCTC..................................................2222.0040000001030
..........................................................................................TAATGCTGTTGTTGACTACAAAC.................................................2312.0020000000020
..........................................................................................TAATGCTGTTGTTGACT.......................................................1712.0020000000020
...................................................TGTAGTCCCCAGGAGTATATTATGG......................................................................................2512.0020000002000
..........................................................................................TAATGCTGTTGTTGACTACT....................................................2012.0020000000020
...................................................TGTAGTCCCCAGGAGTATATTAA........................................................................................2312.0020000000020
...................................................TGTAGTCCCCAGGAGTATATT..........................................................................................2112.0020000000020
..........................................................................................TAATGCTGTTGTTGACTACAAAAC................................................2412.0020000000020
...................................................TGTAGTCCCCAGGAGTATATTATGA......................................................................................2512.0020000000020
..........................................................................................TAATGCTGTTGTTGACTACCTT..................................................2221.5030100000020
..............................................................................TTTTCTAATTCATAA.....................................................................1531.3340000000040
..........................................................................................TAATGCTGTTGTTGACTACAACC.................................................2311.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAATA................................................2411.0010000000010
....................................................GTAGTCCCCAGGAGTATATTATGGTAT...................................................................................2711.0010000000010
.................................................................................TCTAATTCATAATGCTGTTGTTGAC........................................................2511.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACATTT.................................................2321.0020000000020
..........................................................................................TAATGCTGTTGTTGACTACAACCC................................................2411.0010001000000
...................................................TGTAGTCCCCAGGAGTATATTATA.......................................................................................2411.0010000000010
..........................................................................................TAATGCTGTTGTTGACTATG....................................................2011.0010000000010
.............................................................................................TGCTGTTGTTGACTACAAA..................................................1911.0010100000000
..........................................................................................TAATGCTGTTGTTGACTACTCT..................................................2231.0030000000030
..........................................................................................TAATGCTGTTGTTGACTACCG...................................................2111.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACATT..................................................2211.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAAAAT...............................................2511.0010000000010
...................................................................................TAATTCATAATGCTGTTGTTGACT.......................................................2411.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAG..................................................2211.0011000000000
...................................................TGTAGTCCCCAGGAGTATAT...........................................................................................2011.0010000001000
..........................................................................................TAATGCTGTTGTTGACTACAATC.................................................2311.0010000000010
.................................................................................TCTAATTCATAATGCTGTTGTTGACT.......................................................2611.0011000000000
...........................................................................................AATGCTGTTGTTGACTACAAAT.................................................2211.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAGA.................................................2311.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAT..................................................2211.0010000000010
...........................................................................................AATGCTGTTGTTGACTACAAAAA................................................2311.0010000000010
..........................................................................................TAATGCTGTTGTTGACTAG.....................................................1911.0010000000010
..................................................ATGTAGTCCCCAGGAGTATATTATG.......................................................................................2511.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAAAAG...............................................2511.0010000000010
.................................................TATGTAGTCCCCAGGAGTATATT..........................................................................................2311.0010000100000
............................................................................................ATGCTGTTGTTGACTACAAAG.................................................2111.0011000000000
...........................................................................................AATGCTGTTGTTGACTACAAAG.................................................2211.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAAATC................................................2411.0010000000010
............................................................................................ATGCTGTTGTTGACTACAA...................................................1911.0010100000000
.......................................................................................TCATAATGCTGTTGTTGACT.......................................................2011.0011000000000
...................................................TGTAGTCCCCAGGAGTATA............................................................................................1911.0010000010000
..........................................................................................TAATGCTGTTGTTGACTACCTG..................................................2211.0010000000010
..........................................................................................TAATGCTGTTGTTGACTATC....................................................2021.0020000000020
..........................................................................................TAATGCTGTTGTTGACTC......................................................1811.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAG...................................................2111.0011000000000
................................................................................TTCTAATTCATAATGCTGTTGTTGA.........................................................2511.0010000000010
...................................................TGTAGTCCCCAGGAGTATATTATGT......................................................................................2511.0010000001000
............................................................................TATTTTCTAATTCATAATGCTGTTGT............................................................2611.0010000000010
..........................................................................................TAATGCTGTTGTTGACTACAACAA................................................2420.5010000000010
..........................................................................................TAATGCTGTTGTTGACTAAG....................................................2020.5010000000010
..........................................................................................TAATGCTGTTGTTGACTATCC...................................................2130.3310000000010
..........................................................................................TAATGCTGTTGTTGACTTT.....................................................1970.2920000000020
..........................................................................................TAATGCTGTTGTTGACTATCG...................................................2140.2510000000010
..........................................................................................TAATGCTGTTGTTGACTGA.....................................................1950.2011000000000
droPer2
CAATCCAATCCAATAATAAAAAGTTTTTGCATCTAATTTAAGTTCGTGCTATGTAGTCCCCAGGAGTATATTATGGTATTTTCTAATTCATAATGCTGTTGTTGACTGCAAAGTAAGATGTGAGTACTCCACAAAGAATGATTAAATGAAAATTAAGCAAACSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................TAATGCTGTTGTTGACTGT.....................................................19214.00280110026
...................................................TGTAGTCCCCAGGAGTATATTATG.......................................................................................24110.0010000109
..........................................................................................TAATGCTGTTGTTGACTGA.....................................................1918.008000008
...................................................TGTAGTCCCCAGGAGTATATTATGGTA....................................................................................2716.006000006
..........................................................................................TAATGCTGTTGTTGACTGCA....................................................2014.004200101
.................................................TATGTAGTCCCCAGGAGTAT.............................................................................................2013.003000003
..........................................................................................TAATGCTGTTGTTGACTGC.....................................................1913.003000003
..........................................................................................TAATGCTGTTGTTGACTGCAAA..................................................2213.003200001
...................................................TGTAGTCCCCAGGAGTATA............................................................................................1912.002000002
...................................................TGTAGTCCCCAGGAGTATATTATGGTAT...................................................................................2812.002000002
.................................................TATGTAGTCCCCAGGAGTATATT..........................................................................................2312.002000002
..........................................................................................TAATGCTGTTGTTGACTG......................................................1812.002000101
..........................................................................................TAATGCTGTTGTTGACTGTC....................................................2021.503000003
..........................................................................................TAATGCTGTTGTTGACTGG.....................................................1911.001000001
..........................................................................................TAATGCTGTTGTTGACTGCC....................................................2011.001010000
..........................................................................................TAATGCTGTTGTTGACTGCCT...................................................2111.001000001
...................................................TGTAGTCCCCAGGAGTATATTATGA......................................................................................2511.001000001
.................................................TATGTAGTCCCCAGGAGTATAA...........................................................................................2211.001000001
.................................................TATGTAGTCCCCAGGAGTATATTT.........................................................................................2411.001000001
..........................................................................................TAATGCTGTTGTTGACTGCCC...................................................2111.001010000
............................................................................................ATGCTGTTGTTGACTGCAAAGTCT..............................................2411.001000001
.................................................TATGTAGTCCCCAGGAGTATC............................................................................................2111.001000001
...................................................TGTAGTCCCCAGGAGTATATTATGG......................................................................................2511.001000001
..........................................................................................TAATGCTGTTGTTGACTTT.....................................................19100.202000002
..........................................................................................TAATGCTGTTGTTGACTCTC....................................................20200.051000001

Generated: 10/20/2015 at 10:23 PM