dps_1798

CDS [Dpse\GA23257-cds]; exon [dpse_GLEANR_11855:2]; exon [dpse_GLEANR_11855:3]; CDS [Dpse\GA23257-cds]; intron [Dpse\GA23257-in]

##################################################--------------------------------------------------------------------################################################## GAGATCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACAAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCACCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACTTAGAACATCTCCGCAATATC ************************************************.(((((...((((((((((((...)))))))))))))))..........................)).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902011 testis	M040 female body	V112 male body	SRR902010 ovaries	GSM444067 head	SRR902012 CNS imaginal disc
.....CAACGATGGATTGATGACGGTG.............................................................................................................................................	22	0	1	24.00	24	24	0	0	0	0	0
.....CAACGATGGATTGATGACGGTGC............................................................................................................................................	23	0	1	21.00	21	18	3	0	0	0	0
.....CAACGATGGATTGATGACGGT..............................................................................................................................................	21	0	1	11.00	11	10	0	1	0	0	0
....TCAACGATGGATTGATGACGGTG.............................................................................................................................................	23	0	1	9.00	9	8	1	0	0	0	0
....TCAACGATGGATTGATGACGGT..............................................................................................................................................	22	0	1	7.00	7	7	0	0	0	0	0
.....CAACGATGGATTGATGACGG...............................................................................................................................................	20	0	1	5.00	5	2	1	0	2	0	0
....TCAACGATGGATTGATGACGG...............................................................................................................................................	21	0	1	4.00	4	3	0	1	0	0	0
......AACGATGGATTGATGACGGTGCT...........................................................................................................................................	23	0	1	4.00	4	3	1	0	0	0	0
....TCAACGATGGATTGATGACGGTGC............................................................................................................................................	24	0	1	4.00	4	3	1	0	0	0	0
...........TGGATTGATGACGGTGCTGGACGCCA...................................................................................................................................	26	0	1	4.00	4	4	0	0	0	0	0
...........TGGATTGATGACGGTGCTGGACG......................................................................................................................................	23	0	1	3.00	3	3	0	0	0	0	0
.........GATGGATTGATGACGGTGCTGGACGC.....................................................................................................................................	26	0	1	3.00	3	3	0	0	0	0	0
....TCAACGTTGGATTGATGACGGTG.............................................................................................................................................	23	1	1	2.00	2	2	0	0	0	0	0
......AACGATGGATTGATGACGGTG.............................................................................................................................................	21	0	1	2.00	2	2	0	0	0	0	0
.....CAACGATGGATTGATGACGGTGCT...........................................................................................................................................	24	0	1	2.00	2	1	0	1	0	0	0
.....................................................................TGTGTCATATCGGACGGGTGCCC............................................................................	23	0	1	2.00	2	1	1	0	0	0	0
............................................................................TATCGGACGGGTGCCCCGCCAACT....................................................................	24	1	1	2.00	2	0	2	0	0	0	0
...........TGGATTGATGACGGTGCTGGACGC.....................................................................................................................................	24	0	1	2.00	2	2	0	0	0	0	0
..GATCAACGATGGATTGATGACGG...............................................................................................................................................	23	0	1	2.00	2	2	0	0	0	0	0
...................................................TACACAAACCGTCTGATGTGTGTCA............................................................................................	25	0	1	2.00	2	2	0	0	0	0	0
...............................................TGGGTACACAAACCGTCTGATGT..................................................................................................	23	0	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................ATGGGGCTTAGAACATGTCCG.......	21	3	2	1.00	2	0	0	0	2	0	0
................................................................TGATGTGTGTCATATCGGACGGGTGC..............................................................................	26	0	1	1.00	1	0	0	1	0	0	0
.........GATGGATTGATGACGGTGCTGGACGCC....................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
.....CAACGATGGATTGATGACGGTC.............................................................................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
..........ATGGATTGATGACGGTGCTGG.........................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
........CGATGGATTGATGACGGTGCTGGAC.......................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0
....TCAACGATGGATTGATGACGGGG.............................................................................................................................................	23	1	1	1.00	1	1	0	0	0	0	0
........CGATGGATTGATGACGGTG.............................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
...................................................................TGTGTGTCATATCGGACGGGTGCCCC...........................................................................	26	0	1	1.00	1	0	0	1	0	0	0
......AACGATGGATTGATGACGGTGC............................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0
................................................................TGATGTGTGTCATATCGGACGGGT................................................................................	24	0	1	1.00	1	0	0	1	0	0	0
....TCAACGATGGATTGATGACGGTGCTGG.........................................................................................................................................	27	0	1	1.00	1	0	1	0	0	0	0
..................................................................................................................CTAGCGAACAGGGAAGTCCCAG................................	22	0	1	1.00	1	0	1	0	0	0	0
.........GATGGATTGATGACGGTGCTGG.........................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................TTCTCTGGGACTTAGAACATCTCCGCAA....	28	0	1	1.00	1	1	0	0	0	0	0
................................................TGGTACACAAACCGTCTGATGTGTG...............................................................................................	25	1	1	1.00	1	0	1	0	0	0	0
.....................................................................TGTGTCATATCGGACGGGTGC..............................................................................	21	0	1	1.00	1	0	1	0	0	0	0
........................................................................GTCATATCGGACGGGTGCCC............................................................................	20	0	1	1.00	1	0	0	1	0	0	0
...................................................................................................................TAGCGAACAGGGAAGTCCCAGTT..............................	23	0	1	1.00	1	0	0	1	0	0	0
...................................................................TGTGTGTCATATCGGACGGGGG...............................................................................	22	1	1	1.00	1	1	0	0	0	0	0
.............................................................................ATCGGACGGGTGCCCCGCCAACT....................................................................	23	1	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................TGGGACTTAGAACATCTCCGCAATA..	25	0	1	1.00	1	1	0	0	0	0	0
.....................................TACACCGACTTGGGTACACAAACCGTC........................................................................................................	27	0	1	1.00	1	0	0	1	0	0	0
GAGATCAACGATGGATTGATGACGG...............................................................................................................................................	25	0	1	1.00	1	0	1	0	0	0	0
...............TTGATGACGGTGCTGGACGCCCTACA...............................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0
.....CAACGATGGATTGATGACGGTGCTG..........................................................................................................................................	25	0	1	1.00	1	0	1	0	0	0	0
..............................................................................TCGGACGGGTGCCCCGCCAACTCGC.................................................................	25	1	1	1.00	1	0	1	0	0	0	0
...............................................TGGGTACACAAACCGTCTGAT....................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
......AACGATGGATTGATGACGGT..............................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
.....CAACGATGGATTGATGACGGTGCTGG.........................................................................................................................................	26	0	1	1.00	1	0	1	0	0	0	0
.....CAACGATGGATTGATGACGGTA.............................................................................................................................................	22	1	1	1.00	1	0	1	0	0	0	0
.........................TGCTGGACGCCATACACCGACTTGGG.....................................................................................................................	26	0	1	1.00	1	0	1	0	0	0	0
..........ATGGATTGATGACGGGG.............................................................................................................................................	17	1	1	1.00	1	1	0	0	0	0	0
........CGATGGATTGATGACGGTA.............................................................................................................................................	19	1	1	1.00	1	1	0	0	0	0	0
...............................................................CTGATGTGTGTCATATCGGACGGT.................................................................................	24	1	1	1.00	1	0	1	0	0	0	0
.........................................................................TCATATCGGACGGGTGCCCCGCCA.......................................................................	24	1	2	0.50	1	0	1	0	0	0	0
...............AGGATCACGGTGCTGGACGCC....................................................................................................................................	21	3	2	0.50	1	0	1	0	0	0	0
.............................................................GTCTGGTGTGGGTCATCTCG.......................................................................................	20	3	6	0.17	1	0	0	0	0	1	0
....................................................................................................................................................TATAACATCTCCGCAAAAAC	20	3	8	0.13	1	0	1	0	0	0	0
............GGATTGCTGACCGAGCTGGA........................................................................................................................................	20	3	13	0.08	1	0	1	0	0	0	0
......................CGCTGCTGGACGCCACACG...............................................................................................................................	19	3	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................TGAGGCTTAGAACATGTCC........	19	3	20	0.05	1	0	0	0	0	0	1

##################################################--------------------------------------------------------------------##################################################
GAGATCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACAAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCACCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACTTAGAACATCTCCGCAATATC
**************************************************.(((((...((((((((((((...)))))))))))))))..........................)).**************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

SRR902011
testis

M040
female body

V112
male body

SRR902010
ovaries

GSM444067
head

SRR902012
CNS imaginal disc

.....CAACGATGGATTGATGACGGTG.............................................................................................................................................

24.00

.....CAACGATGGATTGATGACGGTGC............................................................................................................................................

21.00

.....CAACGATGGATTGATGACGGT..............................................................................................................................................

11.00

....TCAACGATGGATTGATGACGGTG.............................................................................................................................................

9.00

....TCAACGATGGATTGATGACGGT..............................................................................................................................................

7.00

.....CAACGATGGATTGATGACGG...............................................................................................................................................

5.00

....TCAACGATGGATTGATGACGG...............................................................................................................................................

4.00

......AACGATGGATTGATGACGGTGCT...........................................................................................................................................

4.00

....TCAACGATGGATTGATGACGGTGC............................................................................................................................................

4.00

...........TGGATTGATGACGGTGCTGGACGCCA...................................................................................................................................

4.00

...........TGGATTGATGACGGTGCTGGACG......................................................................................................................................

3.00

.........GATGGATTGATGACGGTGCTGGACGC.....................................................................................................................................

3.00

....TCAACGTTGGATTGATGACGGTG.............................................................................................................................................

2.00

......AACGATGGATTGATGACGGTG.............................................................................................................................................

2.00

.....CAACGATGGATTGATGACGGTGCT...........................................................................................................................................

2.00

.....................................................................TGTGTCATATCGGACGGGTGCCC............................................................................

2.00

............................................................................TATCGGACGGGTGCCCCGCCAACT....................................................................

2.00

...........TGGATTGATGACGGTGCTGGACGC.....................................................................................................................................

2.00

..GATCAACGATGGATTGATGACGG...............................................................................................................................................

2.00

...................................................TACACAAACCGTCTGATGTGTGTCA............................................................................................

2.00

...............................................TGGGTACACAAACCGTCTGATGT..................................................................................................

2.00

............................................................................................................................................ATGGGGCTTAGAACATGTCCG.......

1.00

................................................................TGATGTGTGTCATATCGGACGGGTGC..............................................................................

1.00

.........GATGGATTGATGACGGTGCTGGACGCC....................................................................................................................................

1.00

.....CAACGATGGATTGATGACGGTC.............................................................................................................................................

1.00

..........ATGGATTGATGACGGTGCTGG.........................................................................................................................................

1.00

........CGATGGATTGATGACGGTGCTGGAC.......................................................................................................................................

1.00

....TCAACGATGGATTGATGACGGGG.............................................................................................................................................

1.00

........CGATGGATTGATGACGGTG.............................................................................................................................................

1.00

...................................................................TGTGTGTCATATCGGACGGGTGCCCC...........................................................................

1.00

......AACGATGGATTGATGACGGTGC............................................................................................................................................

1.00

................................................................TGATGTGTGTCATATCGGACGGGT................................................................................

1.00

....TCAACGATGGATTGATGACGGTGCTGG.........................................................................................................................................

1.00

..................................................................................................................CTAGCGAACAGGGAAGTCCCAG................................

1.00

.........GATGGATTGATGACGGTGCTGG.........................................................................................................................................

1.00

........................................................................................................................................TTCTCTGGGACTTAGAACATCTCCGCAA....

1.00

................................................TGGTACACAAACCGTCTGATGTGTG...............................................................................................

1.00

.....................................................................TGTGTCATATCGGACGGGTGC..............................................................................

1.00

........................................................................GTCATATCGGACGGGTGCCC............................................................................

1.00

...................................................................................................................TAGCGAACAGGGAAGTCCCAGTT..............................

1.00

...................................................................TGTGTGTCATATCGGACGGGGG...............................................................................

1.00

.............................................................................ATCGGACGGGTGCCCCGCCAACT....................................................................

1.00

.............................................................................................................................................TGGGACTTAGAACATCTCCGCAATA..

1.00

.....................................TACACCGACTTGGGTACACAAACCGTC........................................................................................................

1.00

GAGATCAACGATGGATTGATGACGG...............................................................................................................................................

1.00

...............TTGATGACGGTGCTGGACGCCCTACA...............................................................................................................................

1.00

.....CAACGATGGATTGATGACGGTGCTG..........................................................................................................................................

1.00

..............................................................................TCGGACGGGTGCCCCGCCAACTCGC.................................................................

1.00

...............................................TGGGTACACAAACCGTCTGAT....................................................................................................

1.00

......AACGATGGATTGATGACGGT..............................................................................................................................................

1.00

.....CAACGATGGATTGATGACGGTGCTGG.........................................................................................................................................

1.00

.....CAACGATGGATTGATGACGGTA.............................................................................................................................................

1.00

.........................TGCTGGACGCCATACACCGACTTGGG.....................................................................................................................

1.00

..........ATGGATTGATGACGGGG.............................................................................................................................................

1.00

........CGATGGATTGATGACGGTA.............................................................................................................................................

1.00

...............................................................CTGATGTGTGTCATATCGGACGGT.................................................................................

1.00

.........................................................................TCATATCGGACGGGTGCCCCGCCA.......................................................................

0.50

...............AGGATCACGGTGCTGGACGCC....................................................................................................................................

0.50

.............................................................GTCTGGTGTGGGTCATCTCG.......................................................................................

0.17

....................................................................................................................................................TATAACATCTCCGCAAAAAC

0.13

............GGATTGCTGACCGAGCTGGA........................................................................................................................................

0.08

......................CGCTGCTGGACGCCACACG...............................................................................................................................

0.05

.............................................................................................................................................TGAGGCTTAGAACATGTCC........

0.05

CTCTAGTTGCTACCTAACTACTGCCACGACCTGCGGTATGTGGCTGAACCCATGTGTTTGGCAGACTACACACAGTATAGCCTGCCCACGGGGTGGTTGAGCGACCGCTTTAAAGATCGCTTGTCCCTTCAGGGTCAAGAGACCCTGAATCTTGTAGAGGCGTTATAG ************************************************.(((((...((((((((((((...)))))))))))))))..........................)).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M040 female body	SRR902011 testis	V112 male body	GSM343916 embryo
.................................CGGTATGTGGCTGAACCCATGTGT...............................................................................................................	24	0	1	3.00	3	3	0	0	0
.........................................GGCTGAACCCATGTGTTTGGCAGACTA....................................................................................................	27	0	1	2.00	2	0	2	0	0
.............................................................................................................TTAAAGATCGCTTGTCCCTTCAGGGT.................................	26	0	1	1.00	1	0	1	0	0
........................................................TTTGGCAGACTACACACAGTATAGCCT.....................................................................................	27	0	1	1.00	1	1	0	0	0
.............................................GAACCCATGTGTTTGGCAGACTACAC.................................................................................................	26	0	1	1.00	1	1	0	0	0
..........................................................................................GGGTGGTTGAGCGACCGCTT..........................................................	20	0	1	1.00	1	1	0	0	0
.....................................................................................................................................GTCAAGAGACCCTGAATCTTGT.............	22	0	1	1.00	1	1	0	0	0
........................................TGGCTGAACCCATGTGTTTGGCAGACT.....................................................................................................	27	0	1	1.00	1	1	0	0	0
....................................................................................................................................GGTCAAGAGACCCTGAATCTTG..............	22	0	1	1.00	1	1	0	0	0
.............................................................................................................TTAAAGATCGCTTGTCCCTTCAG....................................	23	0	1	1.00	1	0	0	1	0
...................................................................................................................ATCGCTTGTCCCTTCAGGGTC................................	21	0	1	1.00	1	1	0	0	0
...............................................................GACTACACACAGTATAGCCTGCCCA................................................................................	25	0	1	1.00	1	1	0	0	0
..................................GGTATGTGGCTGAACCCATGTGT...............................................................................................................	23	0	1	1.00	1	1	0	0	0
....................................................................................CCCACGGGGTGGTTGAGCGACCGCT...........................................................	25	0	1	1.00	1	1	0	0	0
................................GCGGTATGTGGCTGAACCCATGTGT...............................................................................................................	25	0	1	1.00	1	1	0	0	0
.........................................................................................................CGCTTTAAAGATCGCTTGTC...........................................	20	0	1	1.00	1	1	0	0	0
.........................................................................AGTATAGCCTGCCCACGGGGT..........................................................................	21	0	1	1.00	1	0	1	0	0
.....................................................................................................CGACCGCTTTAAAGATCGCTTGTC...........................................	24	0	1	1.00	1	1	0	0	0
...................................GTATGTGGCTGAACCCATGTGT...............................................................................................................	22	0	1	1.00	1	1	0	0	0
.................................................................................CTGTCCACGAGATGGTTGA....................................................................	19	3	13	0.23	3	1	0	2	0
.........................................................................................................................TGTCGCTGCAGGGTCAACAG...........................	20	3	6	0.17	1	0	0	0	1
......................................................................................CATGGGGTGGTTGATCGAT...............................................................	19	3	11	0.09	1	0	0	1	0
............................................................................AGAGCCCGCCCACAGGGTG.........................................................................	19	3	18	0.06	1	1	0	0	0
............................................................................................................TTTGAAGACCGCTTGTACC.........................................	19	3	20	0.05	1	1	0	0	0

CTCTAGTTGCTACCTAACTACTGCCACGACCTGCGGTATGTGGCTGAACCCATGTGTTTGGCAGACTACACACAGTATAGCCTGCCCACGGGGTGGTTGAGCGACCGCTTTAAAGATCGCTTGTCCCTTCAGGGTCAAGAGACCCTGAATCTTGTAGAGGCGTTATAG
**************************************************.(((((...((((((((((((...)))))))))))))))..........................)).**************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M040
female body

SRR902011
testis

V112
male body

GSM343916
embryo

.................................CGGTATGTGGCTGAACCCATGTGT...............................................................................................................

3.00

.........................................GGCTGAACCCATGTGTTTGGCAGACTA....................................................................................................

2.00

.............................................................................................................TTAAAGATCGCTTGTCCCTTCAGGGT.................................

1.00

........................................................TTTGGCAGACTACACACAGTATAGCCT.....................................................................................

1.00

.............................................GAACCCATGTGTTTGGCAGACTACAC.................................................................................................

1.00

..........................................................................................GGGTGGTTGAGCGACCGCTT..........................................................

1.00

.....................................................................................................................................GTCAAGAGACCCTGAATCTTGT.............

1.00

........................................TGGCTGAACCCATGTGTTTGGCAGACT.....................................................................................................

1.00

....................................................................................................................................GGTCAAGAGACCCTGAATCTTG..............

1.00

.............................................................................................................TTAAAGATCGCTTGTCCCTTCAG....................................

1.00

...................................................................................................................ATCGCTTGTCCCTTCAGGGTC................................

1.00

...............................................................GACTACACACAGTATAGCCTGCCCA................................................................................

1.00

..................................GGTATGTGGCTGAACCCATGTGT...............................................................................................................

1.00

....................................................................................CCCACGGGGTGGTTGAGCGACCGCT...........................................................

1.00

................................GCGGTATGTGGCTGAACCCATGTGT...............................................................................................................

1.00

.........................................................................................................CGCTTTAAAGATCGCTTGTC...........................................

1.00

.........................................................................AGTATAGCCTGCCCACGGGGT..........................................................................

1.00

.....................................................................................................CGACCGCTTTAAAGATCGCTTGTC...........................................

1.00

...................................GTATGTGGCTGAACCCATGTGT...............................................................................................................

1.00

.................................................................................CTGTCCACGAGATGGTTGA....................................................................

0.23

.........................................................................................................................TGTCGCTGCAGGGTCAACAG...........................

0.17

......................................................................................CATGGGGTGGTTGATCGAT...............................................................

0.09

............................................................................AGAGCCCGCCCACAGGGTG.........................................................................

0.06

............................................................................................................TTTGAAGACCGCTTGTACC.........................................

0.05

Species	Coordinate	ID	Alignment
dp5	Unknown_group_141:6065-6232 +	dps_1798	GAGATCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACAAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCACCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACTTAGAACATCTCCGCAATATC
droPer2	scaffold_2:1863485-1863648 -		----TCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACGAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCGCCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACATAGAACATCTCCGCAATATC

Species

Coordinate

Alignment

dp5

Unknown_group_141:6065-6232 +

dps_1798

GAGATCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACAAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCACCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACTTAGAACATCTCCGCAATATC

droPer2

scaffold_2:1863485-1863648 -

----TCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACGAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCGCCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACATAGAACATCTCCGCAATATC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

dp5

GAGATCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACAAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCACCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACTTAGAACATCTCCGCAATATC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....CAACGATGGATTGATGACGGTG.............................................................................................................................................	22	1	24.00	24	0	0	0	0	0	0	0	0	24	0
.....CAACGATGGATTGATGACGGTGC............................................................................................................................................	23	1	21.00	21	0	3	0	0	0	0	0	0	18	0
.....CAACGATGGATTGATGACGGT..............................................................................................................................................	21	1	11.00	11	0	0	0	0	0	0	1	0	10	0
....TCAACGATGGATTGATGACGGTG.............................................................................................................................................	23	1	9.00	9	0	1	0	0	0	0	0	0	8	0
....TCAACGATGGATTGATGACGGT..............................................................................................................................................	22	1	7.00	7	0	0	0	0	0	0	0	0	7	0
.....CAACGATGGATTGATGACGG...............................................................................................................................................	20	1	5.00	5	0	1	0	0	0	0	0	2	2	0
....TCAACGATGGATTGATGACGG...............................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	1	0	3	0
......AACGATGGATTGATGACGGTGCT...........................................................................................................................................	23	1	4.00	4	0	1	0	0	0	0	0	0	3	0
....TCAACGATGGATTGATGACGGTGC............................................................................................................................................	24	1	4.00	4	0	1	0	0	0	0	0	0	3	0
...........TGGATTGATGACGGTGCTGGACGCCA...................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	0	0	4	0
...........TGGATTGATGACGGTGCTGGACG......................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	3	0
.........GATGGATTGATGACGGTGCTGGACGC.....................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	3	0
......AACGATGGATTGATGACGGTG.............................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.....CAACGATGGATTGATGACGGTGCT...........................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	1	0	1	0
.....................................................................TGTGTCATATCGGACGGGTGCCC............................................................................	23	1	2.00	2	0	1	0	0	0	0	0	0	1	0
...........TGGATTGATGACGGTGCTGGACGC.....................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..GATCAACGATGGATTGATGACGG...............................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...................................................TACACAAACCGTCTGATGTGTGTCA............................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...............................................TGGGTACACAAACCGTCTGATGT..................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................................................................TGATGTGTGTCATATCGGACGGGTGC..............................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.........GATGGATTGATGACGGTGCTGGACGCC....................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....CAACGATGGATTGATGACGGTC.............................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........ATGGATTGATGACGGTGCTGG.........................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
........CGATGGATTGATGACGGTGCTGGAC.......................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
........CGATGGATTGATGACGGTG.............................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................................TGTGTGTCATATCGGACGGGTGCCCC...........................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0
......AACGATGGATTGATGACGGTGC............................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
................................................................TGATGTGTGTCATATCGGACGGGT................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
....TCAACGATGGATTGATGACGGTGCTGG.........................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................CTAGCGAACAGGGAAGTCCCAG................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........GATGGATTGATGACGGTGCTGG.........................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................TTCTCTGGGACTTAGAACATCTCCGCAA....	28	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................................................TGTGTCATATCGGACGGGTGC..............................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................GTCATATCGGACGGGTGCCC............................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................................TAGCGAACAGGGAAGTCCCAGTT..............................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................TGGGACTTAGAACATCTCCGCAATA..	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................TACACCGACTTGGGTACACAAACCGTC........................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0
GAGATCAACGATGGATTGATGACGG...............................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....CAACGATGGATTGATGACGGTGCTG..........................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................TGGGTACACAAACCGTCTGAT....................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
......AACGATGGATTGATGACGGT..............................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....CAACGATGGATTGATGACGGTGCTGG.........................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....CAACGATGGATTGATGACGGTA.............................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................TGCTGGACGCCATACACCGACTTGGG.....................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........CGATGGATTGATGACGGTA.............................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................CTGATGTGTGTCATATCGGACGGT.................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

----TCAACGATGGATTGATGACGGTGCTGGACGCCATACACCGACTTGGGTACACGAACCGTCTGATGTGTGTCATATCGGACGGGTGCCCCGCCAACTCGCTGGCGAAATTTCTAGCGAACAGGGAAGTCCCAGTTCTCTGGGACATAGAACATCTCCGCAATATC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................................................TCTGATGTGTGTCATATCGGACGG..................................................................................	24	1	2.00	2	0	2	0	0	0	0
..........................................................................................................CGAAATTTCTAGCGAACAGGG.........................................	21	1	1.00	1	0	1	0	0	0	0
.....................................TACACCGACTTGGGTACACGA..............................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..............................................................TCTGATGTGTGTCATATCGGACGGG.................................................................................	25	1	1.00	1	0	1	0	0	0	0

dps_1798

Unknown_group_141:6115-6182 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-21.0	-20.5	-20.1