ID:

dps_1781

 Coordinate:

Unknown_group_13:13874-14024 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.3 -11.0 -10.9 -10.8

Flybase annnotation

CDS [Dpse\GA25149-cds]; exon [dpse_GLEANR_16475:2]; intron [Dpse\GA25149-in]

No Repeatable elements found

mature
star
  1. dps_1781  Unknown_group_13:13932-13952 +
  2. Unknown_group_200:3013-3033 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTGCAACTGTTCTCCTCTCCTCCTATTAGCGTTTGTCTGGCAAACTGGTTTGATAGCCATTTGTTTTGAAATATTTTTTGATTTTAATTTTGTTCAAATTTTGTATTATGGAGTTTTCTGTGGTATGTGCCAAAAAATCCTGTCGGAAAGAGATCACCCATGATCAGTCGAGTATCCCCTGCTGGCTCTGCGACAGCGTAGTGCACGCAAAATGCGCTGGGTTTACGGGCGATGCCCTCGTGGGCGATGCC
************************************************************************************************************.....(((.((((((...(((........(((....))).......))))))....)))..))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 SRR902011
testis
 SRR902010
ovaries
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGC........................................... 23 0 20 3.40 68 61 7 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACG............................................ 22 0 20 2.20 44 42 0 2 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCAC............................................. 21 0 20 1.60 32 24 6 2 0 0
..........................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGC........................................... 22 0 20 1.25 25 14 6 4 0 1
........................................................................................................................................................ATCACCCATGATCAGTCGAGT.............................................................................. 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGCACG............................................ 25 0 20 0.70 14 14 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCA.......................................... 24 0 20 0.60 12 12 0 0 0 0
............................................................................................................TGGAGTTTTCTGTGGTATGTG.......................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................TCTGCGACAGCGTAGTGCACG............................................ 21 0 20 0.45 9 8 0 0 0 1
.......................................................................................................TATTATGGAGTTTTCTGTGGTA.............................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGCA.......................................... 23 0 20 0.30 6 6 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGT........................................... 23 1 20 0.30 6 5 0 1 0 0
...............................................................................................................................................................................................................CAAAATGCGCTGGGTTTACGG....................... 21 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTTCGACAGCGTAGTGCACGC........................................... 23 1 20 0.25 5 3 2 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGA........................................... 23 1 20 0.25 5 4 0 1 0 0
...........................TGAGATTGTCTGGCAAACTGGT.......................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 1 0 0
...........................................................................................................................................................................................................CACGCAAAATGCGCTGGGTTTACG........................ 24 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................................................................................GGTTTACGGGCGATAGCATC............ 20 3 4 0.25 1 1 0 0 0 0
..............................................................................................................................................................................TCCCCTGCTGGCTCTGCGACAGC...................................................... 23 0 20 0.20 4 2 2 0 0 0
..............................................................................................................................................................................TCCCCTGCTGGCTCTGCGACAGCGTAG.................................................. 27 0 20 0.20 4 4 0 0 0 0
..............................................................................................................................GTGCCAAAAAATCCTGTCGGAAAGAGA.................................................................................................. 27 0 5 0.20 1 1 0 0 0 0
.............................................................................................................................TGTGCCAAAAAATCCTGTCGGAAAGAGA.................................................................................................. 28 0 5 0.20 1 1 0 0 0 0
............................................................................................................................................TGTCGGAAAGAGATCACCCATGAAA...................................................................................... 25 2 10 0.20 2 0 0 0 2 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGC............................................... 19 0 20 0.20 4 4 0 0 0 0
.............................................................................................................................TGTGCCAAAAAATCCTGTC........................................................................................................... 19 0 6 0.17 1 1 0 0 0 0
.........................................................................................................................................................................................................TGCACGCAAAATGCGCTGGGTT............................ 22 0 6 0.17 1 1 0 0 0 0
.............................................................................................................................CGTGCCAAAAAAACCTGTCGGAAAGAG................................................................................................... 27 2 6 0.17 1 1 0 0 0 0
.........................................................................................................................................................................GAGTATCCCCTGCTGGCTCTG............................................................. 21 0 13 0.15 2 2 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACACCGTAGTGCACGC........................................... 23 1 20 0.15 3 1 0 0 2 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCAA......................................... 25 0 20 0.15 3 2 1 0 0 0
.........................................................................................................................................................................GAGTATCCCCTGCTGGCTCTGCGA.......................................................... 24 0 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGTA.......................................... 24 1 20 0.10 2 2 0 0 0 0
............................................................................................................................................................................................TGCGACAGCGTAGTGCACGCAG......................................... 22 1 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................................TCCCCTGCTGGCTCTGCGACA........................................................ 21 0 20 0.10 2 2 0 0 0 0
............................................................................................................................................................................................TGCGACAGCGTAGTGCACGC........................................... 20 0 20 0.10 2 1 0 1 0 0
....................................................................................................TTGTATTGTGGAGTTGTCT.................................................................................................................................... 19 2 10 0.10 1 0 0 0 0 1
.........................................................................................................................................................................................CTCTTCGACAGCGTAGTGCAC............................................. 21 1 20 0.10 2 2 0 0 0 0
.TGCAACTGTTCTCCTCTCCTC..................................................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 2
..........................................................................................................................................................................................TCTGCGACAGCGTAGTGCAC............................................. 20 0 20 0.10 2 0 2 0 0 0
.TGCAACTGTTCTCCTCTCCTCCTA.................................................................................................................................................................................................................................. 24 0 20 0.10 2 1 1 0 0 0
......................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGC............................................... 22 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................................................TGGCTCTTCGACAGCGTAGTGCACGCA.......................................... 27 1 20 0.10 2 2 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTG................................................ 18 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................................................................................CTGCGACAGCGTAGTGCACGC........................................... 21 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................................................TGGCTCTTCGACAGCGTAGTGCACGC........................................... 26 1 20 0.10 2 2 0 0 0 0
..........................................................................................................................................................................AGGCTCCCCCGCTGGCTCTGCGACAG....................................................... 26 3 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................................................TGCACGCAAAATGCGCTGGGA............................. 21 1 11 0.09 1 1 0 0 0 0
.........................................................................................................................................................................GAGTATCCCCTGCTGGCTCTGC............................................................ 22 0 12 0.08 1 1 0 0 0 0
............TCCTCTCCTCCTATTAGCGTTTG........................................................................................................................................................................................................................ 23 0 16 0.06 1 1 0 0 0 0
..................CCTCCTATTAGCGTTTGTCTGGC.................................................................................................................................................................................................................. 23 0 17 0.06 1 1 0 0 0 0
.............................................TGGTTTGATAGCCATTTGTTTTGAAATA.................................................................................................................................................................................. 28 0 17 0.06 1 1 0 0 0 0
..............................................GGTTTGATAGCCATTTGTTTTGAAAT................................................................................................................................................................................... 26 0 18 0.06 1 1 0 0 0 0
...CAACTGTTCTCCTCTCCTCCTAT................................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 1
..GCAACTGTTCTCCTCTCCTC..................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGCACGC........................................... 26 0 20 0.05 1 1 0 0 0 0
.TGCAACTGTTCTCCTCTCCTCCT................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................CGACAGCGTAGTGCACGCAG......................................... 20 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................TCCCCTGCTGGCTCTACGA.......................................................... 19 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGA........................................... 22 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCAAA........................................ 26 0 20 0.05 1 0 0 1 0 0
....................................................................................................................................................................................................CGTAGTGCACGCAAAATGCGCTG................................ 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................CGACAGCGTAGTGCACGCAA......................................... 20 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCA.............................................. 20 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................GGCTCTGCGACAGCGTAGTGCA.............................................. 22 0 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................................GCTCTGCGACAGCGTAGTGCACGCAA......................................... 26 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCAAAA....................................... 27 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................GCTGGCTCTGCGACAGCGTAGTG................................................ 23 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................TGCTGGCTCTGCGACAGCGTAGTGC............................................... 25 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................GCGTTGGGTATAGGGGCGA................... 19 3 20 0.05 1 1 0 0 0 0
..GCAACTGTTCTCCTCTCCTCCTAT................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................CCCCTGCTGGCTCTGCGACAG....................................................... 21 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................TGCTGGCTCTGCGACAGCGTG................................................... 21 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTTCGACAGCGTAGTGCACG............................................ 22 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................GGCTCTGCGACAGCGTAGTGCACGC........................................... 25 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................TGCGTTGGGTATAGGGGCG.................... 19 3 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CGCTGCGACAGCGTAGTGCACGC........................................... 23 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGCACGCAG......................................... 28 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................TGGCTCTTCGACAGCGTAGTGCACGCAA......................................... 28 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................TGCACGCAAAATGCGCTGGGTTTTC......................... 25 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................CCCCTGCTGGCTCTGCGACAGCGTAG.................................................. 26 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTGAGACAGCGTAGTGCACGC........................................... 23 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................GGCTCTGCGACAGCGTAG.................................................. 18 0 20 0.05 1 1 0 0 0 0
....................TCCTATTAGCGTTTGTCTGGCA................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................TGCTGGCTCTGCGACAGCGTAGTG................................................ 24 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTATGCGACCGCGTAGAGCACGC........................................... 23 3 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................CCCCTGCTGGCTCTGCGACA........................................................ 20 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................TGGCTCTTCGACAGCGTAGTGCACGT........................................... 26 2 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................TGGCTCTGCCTCAGCGTAGTGCACG............................................ 25 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTTAGGTTTGCGGGCGAT.................. 18 3 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................CCCTGCTGGCTCTGCGACAGCGT.................................................... 23 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................AGGTGGCTCTGCGACAGCGTAGTGCACGC........................................... 29 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................GGCTCTGCGACAGCGTAGTGCACG............................................ 24 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CGCTTCGACAGCGTAGTGCAC............................................. 21 2 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................CTGGCTCTGCGACTGCGTAG.................................................. 20 1 20 0.05 1 0 0 0 1 0
..................................................................................................................................................................................CTGCTGGCTCTGCGACAG....................................................... 18 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................GCTGGCTCTGCGACAGCG..................................................... 18 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTTCGACAGCGTAGTGCACGCA.......................................... 24 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CTCTGCGACCGCGTAGTGTACGC........................................... 23 2 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGCAA......................................... 24 0 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................TCCGCGACAGCGTAGTGCACGC........................................... 22 1 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................CGTAGTGCACGCAAAATGCGC.................................. 21 0 20 0.05 1 1 0 0 0 0
....................TCCTATTAGCGTTTGTCTGGC.................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

GACGTTGACAAGAGGAGAGGAGGATAATCGCAAACAGACCGTTTGACCAAACTATCGGTAAACAAAACTTTATAAAAAACTAAAATTAAAACAAGTTTAAAACATAATACCTCAAAAGACACCATACACGGTTTTTTAGGACAGCCTTTCTCTAGTGGGTACTAGTCAGCTCATAGGGGACGACCGAGACGCTGTCGCATCACGTGCGTTTTACGCGACCCAAATGCCCGCTACGGGAGCACCCGCTACGG
******************************************************************************.....(((.((((((...(((........(((....))).......))))))....)))..))).************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M059
embryo
 SRR902011
testis
 V112
male body		 SRR902010
ovaries
 M022
male body		 GSM444067
head
.................................................................................................................................................................................GGACGACCGAGACGCTGT........................................................ 18 0 20 9.45 189 189 0 0 0 0 0 0 0
.............................................................................................................................................................................AAGGGGACGACCGAGACGCTGT........................................................ 22 1 20 2.15 43 43 0 0 0 0 0 0 0
................................................................................................................................................................................TGGACGACCGAGACGCTGT........................................................ 19 1 20 2.10 42 42 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGGGACGACCGAGACGCTGTCGCAT................................................... 26 0 20 2.00 40 28 10 0 1 0 1 0 0
..........................................................................................................................................................................................................................CCCAAATGCCCGCTACGGGAGCACCCGCT.... 29 0 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................GGGTACTAGTCAGCTCATAGGGG........................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................GGGACGACCGAGACGCTGT........................................................ 19 0 20 1.65 33 0 33 0 0 0 0 0 0
..........................................................................................................................................................................TCATAGGGGACGACCGAGACGCTGT........................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
............................CGCAAACAGACCGTTTGACCAAACTAT.................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
............................AGCAAACAGACCGTTTGACCAAACTAT.................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................GTACTAGTCAGCTCATAGGGGAC...................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................CGGGTACTAGTCAGCTCATAGGGGAC...................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0
...........................TCGCAAACAGACCGTTTGACCAAACTAT.................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................GCAAACAGACCGTTTGACCAAACTAT.................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................GGGACGACCGAGACGCTG......................................................... 18 0 20 0.90 18 18 0 0 0 0 0 0 0
.............................................................................................................................................................................TAGGGGACGACCGAGACGCTGT........................................................ 22 0 20 0.75 15 11 2 1 0 1 0 0 0
.............................................................................................................................................................................TTGGGGACGACCGAGACGCTGT........................................................ 22 1 20 0.50 10 10 0 0 0 0 0 0 0
........................................................................................................................................................................................CGAGACGCTGTCGCATCACGTGCGT.......................................... 25 0 20 0.50 10 10 0 0 0 0 0 0 0
...........................................................AAACACAAGTCTATAAAAAACTAA........................................................................................................................................................................ 24 3 2 0.50 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................AGGGGACGACCGAGACGCTGTC....................................................... 22 0 20 0.45 9 0 0 7 0 0 1 0 1
.............................................................................................................................................................................AAGGGGACGACCGAGACGCTGTC....................................................... 23 1 20 0.40 8 8 0 0 0 0 0 0 0
.............GGAGAGGAGGATAATCGCAAACAG...................................................................................................................................................................................................................... 24 0 14 0.36 5 3 0 0 0 2 0 0 0
............AGGAGAGGAGGATAATCGCAAACA....................................................................................................................................................................................................................... 24 0 14 0.36 5 1 1 0 0 0 3 0 0
................................................................................................................................................................................GGGACGACCGAGACGCTGTC....................................................... 20 0 20 0.35 7 0 6 0 0 1 0 0 0
..........................................................................................................................................................................................AGACGCTGTCGCATCACGTGCGT.......................................... 23 0 20 0.35 7 7 0 0 0 0 0 0 0
................................................................................................................CAAAAGACACCATACACGGTTTT.................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................GAGACGCTGTCGCATCACGTGCGT.......................................... 24 0 20 0.30 6 6 0 0 0 0 0 0 0
.............GGAGAGGAGGATAATCGCAAACA....................................................................................................................................................................................................................... 23 0 14 0.29 4 2 0 1 1 0 0 0 0
..............GAGAGGAGGATAATCGCAAACAGAC.................................................................................................................................................................................................................... 25 0 15 0.20 3 0 0 0 3 0 0 0 0
............................................................................................................................................................................ATAGGGGACGACCGAGACGCTGT........................................................ 23 0 20 0.20 4 2 1 1 0 0 0 0 0
...............................................................................................................................................GCCTTTCTCTAGTGGGTACTAGT..................................................................................... 23 0 10 0.20 2 2 0 0 0 0 0 0 0
..............................................................................................................................................AGCCTTTCTCTAGTGGGTACTAGTC.................................................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................TTAGGGGACGACCGAGACGCTGT........................................................ 23 1 20 0.20 4 2 0 2 0 0 0 0 0
.............................................................................................................................ACACGGTTTTTTAGGACAGCCTTTCT.................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................TGACGACCGAGACGCTGT........................................................ 18 1 20 0.20 4 4 0 0 0 0 0 0 0
.............GGAGAGGAGGATAATCGCAAAC........................................................................................................................................................................................................................ 22 0 16 0.19 3 3 0 0 0 0 0 0 0
...............AGAGGAGGATAATCGCAAACA....................................................................................................................................................................................................................... 21 0 16 0.19 3 3 0 0 0 0 0 0 0
..............................................................................................................................CACGGTTTTTTAGGACAGCCTTT...................................................................................................... 23 0 6 0.17 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................TTTGGGGACGACCGAGACGCTGT........................................................ 23 2 20 0.15 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................TGGGGACGACCGAGACGCTG......................................................... 20 1 20 0.15 3 3 0 0 0 0 0 0 0
...............................................................................................................................................................................GGGGACGACCGAGACGCTGTCGC..................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0
.......ACAAGAGGAGAGGAGGATAAT............................................................................................................................................................................................................................... 21 0 20 0.15 3 1 0 0 1 1 0 0 0
............AGGAGAGGAGGATAATCGCAAACAG...................................................................................................................................................................................................................... 25 0 14 0.14 2 2 0 0 0 0 0 0 0
..............GAGAGGAGGATAATCGCAAACA....................................................................................................................................................................................................................... 22 0 15 0.13 2 2 0 0 0 0 0 0 0
................................................................................TAAAATTAAAACAAGTTTAAAACAT.................................................................................................................................................. 25 0 8 0.13 1 0 0 0 1 0 0 0 0
...........GAGGAGAGGAGGATAATCGCAAAC........................................................................................................................................................................................................................ 24 0 16 0.13 2 2 0 0 0 0 0 0 0
............AGGAGAGGAGGATAATCGCAAAC........................................................................................................................................................................................................................ 23 0 16 0.13 2 2 0 0 0 0 0 0 0
.................AGGAGGATAATCGCAAACAG...................................................................................................................................................................................................................... 20 0 17 0.12 2 2 0 0 0 0 0 0 0
.......................................................................................................................................TTAGGACAGCCTTTCTCTAG................................................................................................ 20 0 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TTGGGGACGACCGAGACGCTGTC....................................................... 23 1 18 0.11 2 1 0 1 0 0 0 0 0
..............GAGAGGAGGATAATAGCAAAC........................................................................................................................................................................................................................ 21 1 18 0.11 2 0 0 0 2 0 0 0 0
.......................................................................................................................................TTAGGACAGCCTTTCTCTAGT............................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0
..CGTTGACAAGAGGAGAGGAGGAT.................................................................................................................................................................................................................................. 23 0 20 0.10 2 1 0 0 1 0 0 0 0
................................................................................................................................................CCTTTCTCTAGTGGGTACTAGT..................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................................CAGCCTTTCTCTAGTGGGTACTAGTC.................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTGGGACGACCGAGACGCTGT........................................................ 22 2 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................TGACGACCGAGACGCTGTC....................................................... 19 1 20 0.10 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................CGACCGAGACGCTGTCGCATC.................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0
..........................................................................................................................................GGACAGCCTTTCTCTAGTGGGTA.......................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CCAAGGGGACGACCGAGACGCTGT........................................................ 24 2 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................................CAGCCTTTCTCTAGTGGGTACTAGT..................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGGGACGACCGAGACGCTGGC....................................................... 22 1 20 0.10 2 0 0 2 0 0 0 0 0
.............................................................................................................................................................................TAGGGGACGACCGAGACGCCGT........................................................ 22 1 20 0.10 2 0 0 2 0 0 0 0 0
................................................................................................................................................................................GGGACGACCGAGACGCTGTCGCAT................................................... 24 0 20 0.10 2 0 1 1 0 0 0 0 0
...................................................................................................................................................................................................CGCATCACGTGCGTTTTACGCGACCC.............................. 26 0 11 0.09 1 1 0 0 0 0 0 0 0
.......................................CGTTCGAGCAAACTATCTG................................................................................................................................................................................................. 19 3 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TCATAGGGGACGACCGAGACGC........................................................... 22 0 12 0.08 1 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................CCCAAATGCCCGCTGTGAG.............. 19 3 12 0.08 1 0 0 0 0 0 0 1 0
.........AAGAGGAGAGGAGGATAATCGCAAACA....................................................................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
.............GGAGAGGAGGATAATCGCAAACAGAC.................................................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0 0 0
..............GAGAGGAGGATAATCGCAAACAG...................................................................................................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0 0 0
...............AGAGGAGGATAATCGCAAACAG...................................................................................................................................................................................................................... 22 0 16 0.06 1 1 0 0 0 0 0 0 0
................GAGGAGGATAATCGCAAACAG...................................................................................................................................................................................................................... 21 0 16 0.06 1 1 0 0 0 0 0 0 0
...............AGAGGAGGATAATCGCAAACAGA..................................................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0 0 0 0
...................................AGACGGTTTGCCGAAACTAT.................................................................................................................................................................................................... 20 3 16 0.06 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................TAGGGGACGACCGAGACGCTGTC....................................................... 23 0 18 0.06 1 1 0 0 0 0 0 0 0
............AGGAGAGGAGGATAATCGCAAA......................................................................................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0 0 0 0 0
.................TGGAGGATAATCGCAAACA....................................................................................................................................................................................................................... 19 1 18 0.06 1 1 0 0 0 0 0 0 0
..............GAGAGGAGGATAATCGCAAAC........................................................................................................................................................................................................................ 21 0 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................TTAGGGGACGACCGAGACGCTGTC....................................................... 24 1 18 0.06 1 1 0 0 0 0 0 0 0
.......ACAAGAGGAGAGGAGGATAATCGCAA.......................................................................................................................................................................................................................... 26 0 18 0.06 1 1 0 0 0 0 0 0 0
.........AAGAGGAGAGGAGGATAATCGC............................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................GGCGACCGAGACGCTGTC....................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CATCACGTGCGTTTTACGCGACC............................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................CAGACGCTGTCGCATCACGTGCGT.......................................... 24 1 20 0.05 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................ATAGGGGACGACCGAGACGCTG......................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................AACTATCGGTAAACAAAACTTTAT.................................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................TCCGAGACGCTGTCGCATCACGTGCGT.......................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................TTGACGACCGAGACGCTGT........................................................ 19 2 20 0.05 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TGGGGACGACCGAGATGCTGT........................................................ 21 2 20 0.05 1 0 0 0 0 0 1 0 0
............................................................................................................................................................................CTTGGGGACGACCGAGACGCTTT........................................................ 23 3 20 0.05 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................GGGGGACGACCGAGACGCTGTCGCAT................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................GCTGTCGCATCACGTGCGT.......................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................GCTGGTAGTCAGCTCATAG........................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................ACCGAGAAGCTGTCGCATCACGTGCGT.......................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CGAGACGCTGTCGCATCACGTGCAT.......................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGGGACGACCGAGACGCTCGC....................................................... 22 2 20 0.05 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................GACGCTGTCGCATCACGTGCGTTT........................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................ATCGGGGACGTCCGAGACGCAGT........................................................ 23 3 20 0.05 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ATTGGACGACCGAGACGCTGT........................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCCAGACGCTGTCGCATCACGT.............................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TGGGGACGACCGAGACTCTGTCGCAT................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................GAGACGCTGTCGCATCACGTGCGTT......................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCGAGACGCTGTCGCATCA................................................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0
....TTGACAAGAGGAGAGGAGGATAAT............................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................TGACGACCGAGACGCTGTCGCATCACGT.............................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CGAGACGCTGTCGCATCACGTGCGTTT........................................ 27 0 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................ACCGAGACGCTGTCGCATCACGTGCCT.......................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................GGGGACGACCGAGACGCCGT........................................................ 20 1 20 0.05 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................GGGACGACAGAGACGCTGT........................................................ 19 1 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................GACCGAGACGGAGTCGCATCACGTGCGT.......................................... 28 2 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................ACCGAGACGGAGTCGCATCACGTGCGT.......................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TGACCGAGACGCTGTCGCATCAAGT.............................................. 25 2 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CCGAGACGCTGTCGCATCACGTGCGT.......................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGGGACGACCGAGACGCTGTCG...................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AACGCTGTCGCATCACGTGCGTCT........................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................GACGCTGTCGCATCACGTGCGTCT........................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CGACCGAGAGGCTGTCGCATCAC................................................ 23 1 20 0.05 1 0 0 0 1 0 0 0 0
..........AGAGGAGAGGAGGATAATCGCAA.......................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................GAGACGCTGTCGCATCAAGTGCGTTT........................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0
....TTGACAAGAGGAGAGGAGGATAA................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................GGGACCACCGAGACGCTGT........................................................ 19 1 20 0.05 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................ATCGGGGACGACCGAGACGCAGT........................................................ 23 2 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................ACCGAGACGCTGTCGCATCACGTGCAT.......................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................CGGACGACCGAGACGCTGT........................................................ 19 1 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................TCGGGGACGACCGAGACGCTGT........................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................CGAGAAGCTGTCGCATCACGTGCGT.......................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CGAGACGCTGTCGCATCACGTGCCGT......................................... 26 2 20 0.05 1 0 0 1 0 0 0 0 0
.ACGTTTACAAGAGGAGAGGAGGAT.................................................................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_13:13824-14074 + dps_1781 CTGCA-ACTGTTCTCCTC--TCCTCCT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGCAAACTGGTTT---GATAGCCA---------------------------------------------------------TTTGTTTTGAAATATTTTTTGATTT---------TAATTTTGTTCAA--ATTTTG---TATTATGGAGTT---TTCTGTG------GTA-TGTGCCAAAAAATCCTGTCGGAAAGAGATCACCCATG------ATCAGTCGAGTATCCCCTGCTGGCTCTGCGACAGCGTAGTGCACGCAAAATGCGCTGGGTTTAC---GGGCGATGCC-CTCGTGGGCGATGCC
droPer2 scaffold_85:154502-154752 + CTGCA-ACTGTTCTCCTC--TCCTCGT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGCACACTGGTTT---GATAGCCA---------------------------------------------------------TTTGTTTTGAAATATTTTTTGATTT---------TAATTTTGTTCAA--ATTTTG---TATTATGGAGTT---TTCTGTG------GTA-TGTGCCAAAAAATCCTGTCGGAAAGAGACCACCCATG------ATCAGCCGAGTATCCCCTGCTGGCTCTGCGATAGCGTAGTGCACGCAAAATACGCTGGGTTTAC---GGGCGATGCC-CTCGTGGGCGATGCC
droWil2 scf2_1100000009758:303-539 + TTGCA-TGTGTTCAAT--------------------------------------TTCTTATACACAGATTTTTTACC---------TTTAGAATTTTTATTT-----------TTTATTTTTTTGTATTTCCTTTT---GTA---------------------------------------------------ATTAAATT--------------------------------------------------------------AAACT-TTTGATAAAATGGTT------GTC-TGCTCAAAAAATAATTGCATAGTTGCCACTAATGCGGTTAACTCCCATGATTATATTCTTTGTTGGTTGTGTGACAATGCGGTTCACGTTAAGTGTGCAGGTTACAC---AGGCAGAATC-------AAGGAGTCT
droVir3 scaffold_12728:80425-80665 + TTGAT-ATTGTTCTACTT--TCTGCCG--CTTGG---------TGC------------------------TCTATAC--------------------------------------------------------------GCTATTAATCTAAACTGCTCTCTTTTTTAATTTGACTGCGTTATTAGAGTAGAGAC-CCACG--------------------------------------------------------------ATAATGGACCA---TAAAATT------GAC-TGCTTCAAGAAAACTTGTCAAATGCAAATTACGGCAA------GTCAATTCAGCATACCTTGTTGGCTGTATCTAAATGTCGTGCATTCAAAATGTACGGGTTACAC---TGGCCTAGTG-------GGGGATGCT
droAna3 scaffold_12933:98637-98897 + CTAA---CTG-----------------------------------------------------------------------CTCTCTTCAATCTCCCCTTTTCG--T---TTC-------CCTGGTGCAGTGGTAC---AAG---------------------------------------------------GTTCATCAATATTATTAATAAATTAATTATTGAATTTTTAACAAATTAAT-TATTTAA--ATTTTTAATAATTATGGAATT---TAAATTG------GTC-TGTGCATTGAAGTCTTGTAATAAGACAATCTCGTCTT------CCCAGCCTACCATCCACTGCTGGCTTTGTGAAAACGTTTTACACGCTAAGTGTGCCGGGTTCAC---GGCCTCAGTT-------TCGGATGCA
droBip1 scf7180000394214:37884-38132 + TTGCA-TTTGTCCTTTGCAGTCTCCCG--C---------------------------------------------------------------------TTCGG--CTTCCTA-------TTTGGCACAGTGGTTC---AAGGTATA---------------------------------------------------------GTGTTTTTTAA--ATTTTTATATAT---------TAATTTTGTTTTGTTAATTAA---TAATATGGAATT---TAAACTG------GTC-TATCCTAAGAAGTCTTGTTACAATACAATCTCCTCAT------CCCAGTCTACCATCCACTGCTGGCTATGTGAAAACGTCGTACACGCCAAGTGTGCCGGGTTCAC---TGCCTCAGTT-------TCGGATGCC
droKik1 scf7180000301743:442-672 + TATAG--CTGCACTCAAG--CG-------------GTTCTAAGCTT--------------------------TCGTCT-GTCTCTCTCGTTT-TTTCGGCACC----------GGCTTT-ATGTGCACCGTGGTCG---AAG---------------------------------------------------GTTT-GTG--------------------------------------------------------------AAAATGGTGTC---AAATATT------GTC-TGCGAAATTAAAGGCTGCCAAAAAGAGGTTTTGGCAG------ATCATCCCAGCCTTTACTGCTGGCTTTGCGATGCGGTCGTTCACGCTAAGTGTCTAGACTTAAC---AGGCCGTATC-------GCAGACGCA
droFic1 scf7180000453608:339-575 - TTCCA-AGCGT-------------------------------------GCAGGCTGCGCTCTTGCGGTACTTTTAACT-G-CTCGCTTGAAAGTTTTTGTTT-----------TGTTTTTCTTCATACAGTGGTAA---GAA---------------------------------------------------GTTAATTA--------------------------------------------------------------ATTATGGAACT---AAATGTG------GTC-TGTTGCCATCAAAAATGTTGTCAGGTAATAAAGCCTG------ATCAACCAATAATGACTTGTTGGCTGTGTGATAAAATAGTGCACACTAAGTGCGCTGGTTTTAA---CGGCCGAACA-------AGTGATGAC
droEle1 scf7180000491301:5894-6102 - CTTAA-ACTG-----------------------------------------------------------------------CTAGCTCACAAATTTCAGTTTCC--A---TTT-------CCTGGAACAGTGGTCTTCCGAT---------------------------------------------------TTCATATA--------------------------------------------------------------GATAAG--AAT---AAAATTT------GTCGTGTTTCTGCAAAAAATGCAGTCTGATGGTCAGGGCTG------ACCAGTCAAATATGACTTGCTGGCTTTGTGAAAATTTGGTGCACACTAAGTGCGCCGGTTTTAC---AGGCCGAACACGT----TGTAAGGGG
droRho1 scf7180000772162:1760-1961 - TATAA--CTG-----------------------------------------------------------------------CTCGTTTATAAATTTCAATTT------------GTTTT-CTTGGTACAGTGGTTC---AAA---------------------------------------------------T--AGGTA--------------------------------------------------------------AA-ATGAATAATAAAAATTTT------GTC-TGCTTCTGCAAAAAATGCAGCCTCGTAATCAGGGCTG------ACCAGTCTAATATGACTTGCTGGCTGTGTGAAAATATGGTGCACACCAAGTGCGCCGGTTTTAC---TGGCCGGACA-------AGTGATGAC
droBia1 scf7180000301787:2795-2979 - AATTTGATCC-TATTG-CCAA-----------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------TTTACTTTGAGGTATTTTTGATATT---------TTATTTCTTTTTG--TTTTCT---TATAATGG---------CTCTT------GTC-TGTTCTAAGAAAAATTGTACACTTGCGTCTTTAACTA------AAGACCCCTTAATTTTTTGCTGGCTCTGCGATTCGATGACGTACGTCCAATGTGCAGGATTCAC---CGGC----------------------
droTak1 scf7180000414133:7064-7322 - ACTTT-TCCC-TCTTTCG-AA--------------ATTTAAAGCGTACGGAGTCGGTGCTCTTGCGGTACTTTTAACT-G-CTCGTTCGCAAATTTCGGTCCCTACATTTCTG-------TTTGGTACAGTGGGCA---AAA---------------------------------------------------TATTTACA--------------------------------------------------------------ATTATGGATA------CTTTT------GTC-TGCTCTATTAATAATTGCCATCAATTAATCAGAGCTG------ATCAGTCAAAACTGACCTGTTGCCTGTGTGAAAAAATGGCTCATACCAAGTGTGCCGGCTATAC---TGGCCGAACC-------AGTGATGAC
droEug1 scf7180000407725:1893-2105 + CTCTCAAACT-CTCTT-TCTTCTT-TCCTAT-AA---------TAT----------------------------------------------------------------TTT-------TCTGGCACAGTGGCTT---ACA---------------------------------------------------TCTTGCTA--------------------------------------------------------------ATTATT---TGCAAAATGTCTGATATTATT-TGTTGCATTAAAAAATGCAATAAAATTGTGTCGGTTG------ACCAAGAAAGCGTCCACTGTTGGCTGTGTGACAACATTGCGCACTCCAAGTGTGCAGGGTTTAAGTCAGCCACCATT-------CCGGATGCT
dm3 chr3LHet:483469-483699 - TGCAG-----------------------------------------------ACTGCTCTCGTGCGGTTCTTTTAACA-G-CTCGCTTGAAAGTTTTGATCT-----------TGTGTTTTCGTGCACAGTGGTCT---GAT---------------------------------------------------TTTAGATA--------------------------------------------------------------AACGTGGAAACCGTAAATGTT------GTC-TGCTTTTATAAAAAATGTTGCCTGGTTATAAAACCTG------AGCAGCCAAAAATGATTTGTTGGCTATGTGATAGAATGGTGCATACTAAAAGCGCTGGTTTTGA---TGGCCGTACA-------AGTGATGAC
droSim2 3l:23424488-23424729 - TTTCCGAGCG-T------------------------------------GCAGACTGCTCTCTTGCGGTTCTTTTAACAGCGCTCTCTTGAAAGTTTTGATCT-----------TGTGTT-GTTTACACAGTTGTCT---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAAATGTT------ATC-TGCTTTTATAAAAATTGTTGCCAGGTTATAATACCTG------AGCAGCCAAAAATGATTTGTTGGCTATGTGGTAGAATGGTGCATACTAAGTGCGCTGACTTTAA---TGGCCGAACA-------AGCGATGAC
droSec2 scaffold_5:116247-116480 + CGT---------------------------------------------GCAGACTGCTCTCTTGCGGTTCTTTTAACAGCGCTCTCTTGAAAGTTTTGATCT-----------TGTGTT-GTTTACACAGTTGTCT---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAAATGTT------ATC-TGCTTTTATAAAAATTGTTGCCAGATTATAATACCTG------AGCAGCCAAAAATGATTTGTTGGCTATGTGATAGAATGGTGCATACTAAGTGCGCTGACTTTAA---TGGCCGTACA-------AGTGATGAC
droYak3 v2_chrUn_003:25487-25734 + GTGCA-CCCGCTCTCTCG-CTCTC-CCACAC-AAAATTCTAAGGT---GCAGACTGTGCTCTTGCGGTATATT--------------------TTCTGATTT-----------TGTCT--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAATTA--------------------------------------------------------------AACATGGAAAC---CAATGTT------GTC-TGCTTCCATAACAAATGCCGTCAGGTAATAAAGCCTG------AGCAGTCGAAAATGACCTGTTGGCTATGTGATAGAATGGTGCACACTAAGTGCGCTGGTTTTAA---CGGCCGAACA-------AGTGATGAC
droEre2 scaffold_4512:1082776-1082976 + TTTAA--CAG-----------------------------------------------------------------------CTGGTTTGCAATTTTTGATTT-----------TATGT--CTTTGTACAGTGGTCT---GAA---------------------------------------------------AC-AAACA--------------------------------------------------------------AAAGTGGAAAC---TAATGTT------ATC-TGCTTCCAAAACGAATGCCGTCAAATAATAAAGCCTG------AACAACCCAAAATGACTTGTTGGCTGTGTGATAAAATGGTGCACACTATGTGCGCAGGTTTTAG---AGGGCGAACA-------AGTTATAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTGCA-ACTGTTCTCCTC--TCCTCCT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGCAAACTGGTTT---GATAGCCA---------------------------------------------------------TTTGTTTTGAAATATTTTTTGATTT---------TAATTTTGTTCAA--ATTTTG---TATTATGGAGTT---TTCTGTG------GTA-TGTGCCAAAAAATCCTGTCGGAAAGAGATCACCCATG------ATCAGTCGAGTATCCCCTGCTGGCTCTGCGACAGCGTAGTGCACGCAAAATGCGCTGGGTTTAC---GGGCGATGCC-CTCGTGGGCGATGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGC...............................................23203.406806170000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACG................................................22202.204404200200000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCAC.................................................21201.603202460200000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGC...............................................22201.252501460400100
.................................................................................................................................................................................................................................................................................................................................ATCACCCATG------ATCAGTCGAGT..................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGCACG................................................25200.701401400000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCA..............................................24200.601201200000000
...........................................................................................................................................................................................................................................................................TGGAGTT---TTCTGTG------GTA-TGTG....................................................................................................................................2120.5010100000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGCGACAGCGTAGTGCACG................................................21200.4590800000100
......................................................................................................................................................................................................................................................................TATTATGGAGTT---TTCTGTG------GTA-........................................................................................................................................2230.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGCA..............................................23200.3060600000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGT...............................................23200.3060500100000
..............................................................................................................................................................................................................................................................................................................................................................................................CAAAATGCGCTGGGTTTAC---GG........................2140.2510100000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGA...............................................23200.2550400100000
..........................................................................................................................................................................................................................................................................................................................................................................................CACGCAAAATGCGCTGGGTTTAC---G.........................2440.2510100000000
.............................................................................................................................................................................................................................................................................................................................................................TCCCCTGCTGGCTCTGCGACAGC..........................................................23200.2040220000000
.............................................................................................................................................................................................................................................................................................................................................................TCCCCTGCTGGCTCTGCGACAGCGTAG......................................................27200.2040400000000
.......................................................................................................................................................................................................................................................................................................GTGCCAAAAAATCCTGTCGGAAAGAGA............................................................................................................2750.2010100000000
......................................................................................................................................................................................................................................................................................................TGTGCCAAAAAATCCTGTCGGAAAGAGA............................................................................................................2850.2010100000000
.....................................................................................................................................................................................................................................................................................................................TGTCGGAAAGAGATCACCCATG------AAA..........................................................................................25100.2020000000020
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGC...................................................19200.2040400000000
......................................................................................................................................................................................................................................................................................................TGTGCCAAAAAATCCTGTC.....................................................................................................................1960.1710100000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCACGCAAAATGCGCTGGGTT................................2260.1710100000000
........................................................................................................................................................................................................................................................................................................................................................GAGTATCCCCTGCTGGCTCTG.................................................................21130.1520200000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCAA.............................................25200.1530210000000
........................................................................................................................................................................................................................................................................................................................................................GAGTATCCCCTGCTGGCTCTGCGA..............................................................2490.1110100000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCGACAGCGTAGTGCACGCAG.............................................22200.1020200000000
.............................................................................................................................................................................................................................................................................................................................................................TCCCCTGCTGGCTCTGCGACA............................................................21200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCGACAGCGTAGTGCACGC...............................................20200.1020100100000
.TGCA-ACTGTTCTCCTC--TCCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000200
.........................................................................................................................................................................................................................................................................................................................................................................TCTGCGACAGCGTAGTGCAC.................................................20200.1020020000000
.TGCA-ACTGTTCTCCTC--TCCTCCT--A................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020110000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGC...................................................22200.1020200000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTG....................................................18200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................CTGCGACAGCGTAGTGCACGC...............................................21200.1020200000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCACGCAAAATGCGCTGGGA.................................21110.0910100000000
........................................................................................................................................................................................................................................................................................................................................................GAGTATCCCCTGCTGGCTCTGC................................................................22120.0810100000000
.............TCCTC--TCCTCCT--ATTAG---------CGT----------------------------------------------------------------TTG-------......................................................................................................................................................................................................................................................................................................................23160.0610100000000
.....................CCTCCT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGC................................................................................................................................................................................................................................................................................................................23170.0610100000000
..................................................................................................................................TGGTTT---GATAGCCA---------------------------------------------------------TTTGTTTTGAAATA....................................................................................................................................................................................................................28170.0610100000000
...................................................................................................................................GGTTT---GATAGCCA---------------------------------------------------------TTTGTTTTGAAAT.....................................................................................................................................................................................................................26180.0610100000000
...CA-ACTGTTCTCCTC--TCCTCCT--AT...............................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000100
..GCA-ACTGTTCTCCTC--TCCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGCACGC...............................................26200.0510100000000
.TGCA-ACTGTTCTCCTC--TCCTCCT--.................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................CGACAGCGTAGTGCACGCAG.............................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGA...............................................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCAAA............................................26200.0510000100000
...................................................................................................................................................................................................................................................................................................................................................................................CGTAGTGCACGCAAAATGCGCTG....................................23200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................CGACAGCGTAGTGCACGCAA.............................................20200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCA..................................................20200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCGACAGCGTAGTGCA..................................................22200.0510000100000
.......................................................................................................................................................................................................................................................................................................................................................................GCTCTGCGACAGCGTAGTGCACGCAA.............................................26200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGCGACAGCGTAGTGCACGCAAAA...........................................27200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................GCTGGCTCTGCGACAGCGTAGTG....................................................23200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................TGCTGGCTCTGCGACAGCGTAGTGC...................................................25200.0510100000000
..GCA-ACTGTTCTCCTC--TCCTCCT--AT...............................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................CCCCTGCTGGCTCTGCGACAG...........................................................21200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................TGCTGGCTCTGCGACAGCGTG.......................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCGACAGCGTAGTGCACGC...............................................25200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGCGACAGCGTAGTGCACGCAG.............................................28200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................CCCCTGCTGGCTCTGCGACAGCGTAG......................................................26200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCGACAGCGTAG......................................................18200.0510100000000
.......................TCCT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGCA...............................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................TGCTGGCTCTGCGACAGCGTAGTG....................................................24200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................CCCCTGCTGGCTCTGCGACA............................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................CCCTGCTGGCTCTGCGACAGCGT........................................................23200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCGACAGCGTAGTGCACG................................................24200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCTCTGCGACAG...........................................................18200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................GCTGGCTCTGCGACAGCG.........................................................18200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGCGACAGCGTAGTGCACGCAA.............................................24200.0510000100000
...................................................................................................................................................................................................................................................................................................................................................................................CGTAGTGCACGCAAAATGCGC......................................21200.0510100000000
.......................TCCT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGC................................................................................................................................................................................................................................................................................................................21200.0510000000010
droPer2
CTGCA-ACTGTTCTCCTC--TCCTCGT--ATTAG---------CGT----------------------------------------------------------------TTG-------TCTGGCACACTGGTTT---GATAGCCA---------------------------------------------------------TTTGTTTTGAAATATTTTTTGATTT---------TAATTTTGTTCAA--ATTTTG---TATTATGGAGTT---TTCTGTG------GTA-TGTGCCAAAAAATCCTGTCGGAAAGAGACCACCCATG------ATCAGCCGAGTATCCCCTGCTGGCTCTGCGATAGCGTAGTGCACGCAAAATACGCTGGGTTTAC---GGGCGATGCC-CTCGTGGGCGATGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................CGT----------------------------------------------------------------TTG-------TCTGGCACACTGGTTT---GA.................................................................................................................................................................................................................................................................................................24200.204040000
......................................................................................................................................................................................................................................................................................................................................................CCGAGTATCCCCTGCTGGCTCT..................................................................22200.051010000
.................................G---------CGT----------------------------------------------------------------TTG-------TCTGGCACACTG..........................................................................................................................................................................................................................................................................................................19200.051010000
..............................................................................................................TTG-------TCTGGCACACTGGTTT---GATAG..............................................................................................................................................................................................................................................................................................24200.051010000
.................................G---------CGT----------------------------------------------------------------TTG-------TCTGGCACACTGGTT.......................................................................................................................................................................................................................................................................................................22200.051010000
...........................................................................................................................................................................................................................................................................................................................................................TATCCCCTGCTGGCTCTGCGATA............................................................23200.051100000
...........................................CGT----------------------------------------------------------------TTG-------TCTGGCACACTGGTTT---...................................................................................................................................................................................................................................................................................................22200.051000001
droWil2
TTGCA-TGTGTTCAAT--------------------------------------TTCTTATACACAGATTTTTTACC---------TTTAGAATTTTTATTT-----------TTTATTTTTTTGTATTTCCTTTT---GTA---------------------------------------------------ATTAAATT--------------------------------------------------------------AAACT-TTTGATAAAATGGTT------GTC-TGCTCAAAAAATAATTGCATAGTTGCCACTAATGCGGTTAACTCCCATGATTATATTCTTTGTTGGTTGTGTGACAATGCGGTTCACGTTAAGTGTGCAGGTTACAC---AGGCAGAATC-------AAGGAGTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................TTGGTTGTGTGACAATGCGGTTCACG................................................26202.7054001530
....................................................................................................................................................................................................................................................................................................................................................................TTGGTTGTGTGACAATGCGGTT....................................................22200.35707000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGTGTGCAGGTTACAC---AGGCAG....................24200.20404000
........................................................................................................................................................................................................................................................................................GGTT------GTC-TGCTCAAAAAATAATTG.......................................................................................................................24200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................TTAAGTGTGCAGGTTACAC---AGGCAGA...................26200.10200020
.............................................................................................................................................................................................................................................................................................................................................................................TGACAATGCGGTTCACGTTAAGTGTG.......................................26200.10200020
..........................................................................................................................................................................................................................................................................................................................................................ATATTCTTTGTTGGTTGTGTGAC.............................................................23200.10220000
...........................................................................................................................................................................................................................................................................T-TTTGATAAAATGGTT------GTC-TGCTCAAA................................................................................................................................27200.10200020
................................................................................................................................................................................................................................................................................................................................................TCCCATGATTATATTCTTTG..........................................................................20200.10202000
.....................................................................................................................................................................................................................................................................................................................................................TGATTATATTCTTTGTTGGTTGTGTG...............................................................26200.10201010
...............................................................................................................................................................................................................................................................................................................................................................................................................AC---AGGCAGAATC-------AAGGAGTCT21200.10202000
...........................................................................................................................................................................................................................................................................T-TTTGATAAAATGGTT------GTC-TGCTCA..................................................................................................................................25200.10202000
.........................................................................................................................................................................................................................................................................................................................................................TATATTCTTTGTTGGTTGTGTGACAA...........................................................26200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................................CAC---AGGCAGAATC-------AAGGAGTCC22200.05101000
...........................................................................................................................................................................................................................................................................T-TTTGATAAAATGGTT------GTC-TGCTCAA.................................................................................................................................26200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................CACGTTAAGTGTGCAGGTTAC...............................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................AATGCGGTTCACGTTAAGTGT........................................21200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................TGCGGTTCACGTTAAGTGTG.......................................20200.05100010
.........................................................................................................................................................................................................................................................................ACT-TTTGATAAAATGGTT------GTC-TG......................................................................................................................................23200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................TGCGGTTCACGTTAAGTGTGC......................................21200.05100010
........................................................................................................................................................................................................................................................................................................................ATAGTTGCCACTAATGCGGTT.................................................................................................21200.05101000
.....................................................................TTTTTACC---------TTTAGAATTTTTATTT-----------TT...........................................................................................................................................................................................................................................................................................................................26200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................GTTCACGTTAAGTGTGCAGGTTACAC---..........................26200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGTTACAC---AGGCAGAATC-------AAG......25200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................TGGTTGTGTGACAATGCGGT.....................................................20200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGGTTACAC---AGGCAGAATC-------AAGG.....28200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................CACGTTAAGTGTGCAGGTTACAC---AGGC......................27200.05100010
...................................................................................................................................................................................................................................................................................................................................................CATGATTATATTCTTTGTTGGTTGT..................................................................25200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGGTTACAC---AGGCAGAATC-------.........24200.05101000
..............................................................................................................................................................................................................................................................................................................................................................TCTTTGTTGGTTGTGTGACAATGC........................................................24200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................TGGTTGTGTGACAATGCGGTTC...................................................22200.05101000
....................................................................................................................................................................................................................................................................................................................................................................TTGGTTGTGTGACAATGCGGTTCG..................................................24200.05100010
....................................................................................................................................................................................................................................................................................................................................................................TTGGTTGTGTGACAATGCGGTTC...................................................23200.05100100
..................................................................................................................................................................................................................................................................................TAAAATGGTT------GTC-TGCTCAAA................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................ACT-TTTGATAAAATGGTT------GTC-TGCTCA..................................................................................................................................27200.05101000
..............................................................................................................................................................................................................................................................................................................................................ACTCCCATGATTATATTCTTTG..........................................................................22200.05101000
................................................................................................................................................................................................................................................................................................................................................................................CAATGCGGTTCACGTTAAGTGTGC......................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGTGTGCAGGTTACAC---AGG.......................21200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................C---AGGCAGAATC-------AAGGAGTCT20200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................TCACGTTAAGTGTGCAGGTTACAC---AGG.......................27200.05100010
....................................................................................................................................................................................................................................................................................................................................................................TTGGTTGTGTGACAATGCGGTTCACGTT..............................................28200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................ACAATGCGGTTCACGTTAAGTGTG.......................................24200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGTTACAC---AGGCAGAATC-------AAGGA....27200.05100100
...............................................................................................................................................................................................................................................................................................................................................................................................................AC---AGGCAGAATC-------AAGGAGT..19200.05100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAATC-------AAGGAGTCT18200.05101000
.......................................................................................................................................................................................................TT--------------------------------------------------------------AAACT-TTTGATAAAATGGT...................................................................................................................................................21200.05101000
droVir3
TTGAT-ATTGTTCTACTT--TCTGCCG--CTTGG---------TGC------------------------TCTATAC--------------------------------------------------------------GCTATTAATCTAAACTGCTCTCTTTTTTAATTTGACTGCGTTATTAGAGTAGAGAC-CCACG--------------------------------------------------------------ATAATGGACCA---TAAAATT------GAC-TGCTTCAAGAAAACTTGTCAAATGCAAATTACGGCAA------GTCAATTCAGCATACCTTGTTGGCTGTATCTAAATGTCGTGCATTCAAAATGTACGGGTTACAC---TGGCCTAGTG-------GGGGATGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................TCTAAACTGCTCTCTTTTTTAATTT..................................................................................................................................................................................................................................................................2560.171000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................TTAATCTAAACTGCTCTCTTTT.........................................................................................................................................................................................................................................................................2270.141000000001000000000000000000000000000000000000000000000000000000
................TT--TCTGCCG--CTTGG---------TGC------------------------TCTATAC--------------------------------------------------------------GC.................................................................................................................................................................................................................................................................................................2670.141001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACAC---TGGCCTAGTG-------GGGGA....2180.131000000000000000000000000000100000000000000000000000000000000000
....T-ATTGTTCTACTT--TCTGCCG--.................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................CACG--------------------------------------------------------------ATAATGGACCA---TAAAATT------GAC-T.......................................................................................................................................2690.111000000000000000000000000100000000000000000000000000000000000000
droAna3
CTAA---CTG-----------------------------------------------------------------------CTCTCTTCAATCTCCCCTTTTCG--T---TTC-------CCTGGTGCAGTGGTAC---AAG---------------------------------------------------GTTCATCAATATTATTAATAAATTAATTATTGAATTTTTAACAAATTAAT-TATTTAA--ATTTTTAATAATTATGGAATT---TAAATTG------GTC-TGTGCATTGAAGTCTTGTAATAAGACAATCTCGTCTT------CCCAGCCTACCATCCACTGCTGGCTTTGTGAAAACGTTTTACACGCTAAGTGTGCCGGGTTCAC---GGCCTCAGTT-------TCGGATGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................TCTT------CCCAGCCTACCATCCACTGC.........................................................................24200.357070000
.......................................................................................................................................................................................................................................................................................................................................TCTT------CCCAGCCTACCATCCACTGCTG.......................................................................26200.204400000
.......................................................................................................................................................................................................................................................................................................................................TCTT------CCCAGCCTACCATCCACTGCTGG......................................................................27200.153300000
.................................................................................................................................................................................................................................................................................................................................ATCTCGTCTT------CCCAGCCTACCATC...............................................................................24200.153030000
.....................................................................................................................................................................................................................................................................................TAAATTG------GTC-TGTGCATTGAAGTCT.........................................................................................................................25200.102020000
...........................................................................................................................................................................................................................................................................................................................................................................................ACGCTAAGTGTGCCGGGTTCAC---GG........................24200.102020000
........................................................................................................................................................................................................................................................................................................................................................................................TACACGCTAAGTGTGCCGGGTTCAC---..........................25200.102000020
..............................................................................................................................................................................................................................................................................................................................................................................................................CAC---GGCCTCAGTT-------TCGGATGC.21200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................ACACGCTAAGTGTGCCGGGTTCAC---G.........................25200.102200000
.................................................................................................................................................................................................................................................................................T---TAAATTG------GTC-TGTGCATTGAAGTCT.........................................................................................................................26200.102020000
..........................................................................................................................................................................................................................................................................................................................TAAGACAATCTCGTCTT------CCCAGCCTACC..................................................................................28200.102020000
.........................................................................................................................................................................................................................................................................................................................................TT------CCCAGCCTACCATCCACTGCTG.......................................................................24200.051100000
...........................................................................................................................................................................................................................................................................................................................................................CATCCACTGCTGGCTTTGTGAAAACGTT.......................................................28200.051010000
.....................................................................................................................................................................................................................................................................................TAAATTG------GTC-TGTGCATTGAAGTCTTG.......................................................................................................................27200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTACACGCTAAGTGTGCCGGGTTCAC---..........................28200.051010000
..........................................................................................................................................................................................................................................................................................................................TAAGACAATCTCGTCTT------CCCAGCCTA....................................................................................26200.051100000
.........................................................................................................................................................................................................................................................................................................................................TT------CCCAGCCTACCATCCACTGCTGGC.....................................................................26200.051010000
.....................................................................................................................................................................................................................................................................................TAAATTG------GTC-TGTGCATTGAAGTCTT........................................................................................................................26200.051100000
.................................................................................................................................................................................................................................................................................................................................................................CTGCTGGCTTTGTGAAAACGTT.......................................................22200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTTTGTGAAAACGTTTTACACGC...............................................26200.051001000
.........................................................................................................................................................................................................................................................................TATGGAATT---TAAATTG------GTC-TGTGC...................................................................................................................................24200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTTCAC---GGCCTCAGTT-------TCGGATGC.24200.051010000
..........................................................................................................................................................................................................................................................................................................................................T------CCCAGCCTACCATCCACTGCT........................................................................22200.051010000
...............................................................................................................................................................................................................................................................................................................................................................CACTGCTGGCTTTGTGAAAACGTT.......................................................24200.051010000
..................................................................................................................................................................................................................................................................................................................................................................TGCTGGCTTTGTGAAAACGTTTTA....................................................24200.051100000
............................................................................................................................................................................................................................................................................GGAATT---TAAATTG------GTC-TGTGCATT................................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................CCTACCATCCACTGCTGGCTT...................................................................21200.051010000
..................................................................................................................................................................................................................................................................................................................................................................TGCTGGCTTTGTGAAAACGTTTTACAC.................................................27200.051010000
......................................................................................................................................................................................................................................................................................AAATTG------GTC-TGTGCATTGAAGTCTTG.......................................................................................................................26200.051100000
..................................................................................................................................................................................................................................................................................................................................TCTCGTCTT------CCCAGCCTACCATCCAC............................................................................26200.051010000
.............................................................................................................................................................................................................................................................................................................................GACAATCTCGTCTT------CCCAGCCTACC..................................................................................25200.051100000
..........................................................................................................................................................................................................................................................................................................................................T------CCCAGCCTACCATCCACTGCTGGCTTT..................................................................28200.051100000
..........................................................................................................................................................................................................................................................................................................................................T------CCCAGCCTACCATCCACTGC.........................................................................21200.051010000
......................................................................................................................................................................................................................................................................................................................................GTCTT------CCCAGCCTACCATCCACTGCTGGC.....................................................................29200.051100000
...............................................................................................................................CAGTGGTAC---AAG---------------------------------------------------GTTCATCAATATTAT..............................................................................................................................................................................................................................27200.051100000
..................................................................................................................................................................................................................................................................................................................TCTTGTAATAAGACAATCTCGTCTT------CCCA.........................................................................................29200.051100000
.........................................................................................................................................................................................................................................................................................................................................TT------CCCAGCCTACCATCCACTGCTGGCTTT..................................................................29200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGTGTGCCGGGTTCAC---..........................18200.051010000
.......................................................................................................................................................................................................................................................................................................................................................CTACCATCCACTGCTGGCTTTGTGA..............................................................25200.051100000
...............................................................................................................................................................................................................................................................................................................................CAATCTCGTCTT------CCCAGCCTACCATCCAC............................................................................29200.051010000
....................................................................................................................................................................................................................................................................................................................................TCGTCTT------CCCAGCCTACCATCCACT...........................................................................25200.051010000
.............................................................................................................................................................................................................................................................................................................................................................TCCACTGCTGGCTTTGTGAAAACGTT.......................................................26200.051010000
.......................................................................................................................................................................................................................................................................................................................................TCTT------CCCAGCCTACCATCCAC............................................................................21200.051100000
.......................................................................................................................................................................................................................................................................................................................................TCTT------CCCAGCCTACCATCCACTGCTGGCT....................................................................29200.051100000
.......................................................................................................................................................................................................................................................................................................................................................CTACCATCCACTGCTGGCTTTGTG...............................................................24200.051100000
....................................................................................................................................................................................................................................................................................................................................TCGTCTT------CCCAGCCTACCATCCACTGC.........................................................................27200.051100000
..........................................................................................................................................................................................................................................................................................................................................T------CCCAGCCTACCATCCACTGCTGGCC....................................................................26200.051010000
droBip1
TTGCA-TTTGTCCTTTGCAGTCTCCCG--C---------------------------------------------------------------------TTCGG--CTTCCTA-------TTTGGCACAGTGGTTC---AAGGTATA---------------------------------------------------------GTGTTTTTTAA--ATTTTTATATAT---------TAATTTTGTTTTGTTAATTAA---TAATATGGAATT---TAAACTG------GTC-TATCCTAAGAAGTCTTGTTACAATACAATCTCCTCAT------CCCAGTCTACCATCCACTGCTGGCTATGTGAAAACGTCGTACACGCCAAGTGTGCCGGGTTCAC---TGCCTCAGTT-------TCGGATGCCSizeHit CountTotal NormTotal
No Reads
droKik1
TATAG--CTGCACTCAAG--CG-------------GTTCTAAGCTT--------------------------TCGTCT-GTCTCTCTCGTTT-TTTCGGCACC----------GGCTTT-ATGTGCACCGTGGTCG---AAG---------------------------------------------------GTTT-GTG--------------------------------------------------------------AAAATGGTGTC---AAATATT------GTC-TGCGAAATTAAAGGCTGCCAAAAAGAGGTTTTGGCAG------ATCATCCCAGCCTTTACTGCTGGCTTTGCGATGCGGTCGTTCACGCTAAGTGTCTAGACTTAAC---AGGCCGTATC-------GCAGACGCASizeHit CountTotal NormTotal
No Reads
droFic1
TTCCA-AGCGT-------------------------------------GCAGGCTGCGCTCTTGCGGTACTTTTAACT-G-CTCGCTTGAAAGTTTTTGTTT-----------TGTTTTTCTTCATACAGTGGTAA---GAA---------------------------------------------------GTTAATTA--------------------------------------------------------------ATTATGGAACT---AAATGTG------GTC-TGTTGCCATCAAAAATGTTGTCAGGTAATAAAGCCTG------ATCAACCAATAATGACTTGTTGGCTGTGTGATAAAATAGTGCACACTAAGTGCGCTGGTTTTAA---CGGCCGAACA-------AGTGATGACSizeHit CountTotal NormTotal
No Reads
droEle1
CTTAA-ACTG-----------------------------------------------------------------------CTAGCTCACAAATTTCAGTTTCC--A---TTT-------CCTGGAACAGTGGTCTTCCGAT---------------------------------------------------TTCATATA--------------------------------------------------------------GATAAG--AAT---AAAATTT------GTCGTGTTTCTGCAAAAAATGCAGTCTGATGGTCAGGGCTG------ACCAGTCAAATATGACTTGCTGGCTTTGTGAAAATTTGGTGCACACTAAGTGCGCCGGTTTTAC---AGGCCGAACACGT----TGTAAGGGGSizeHit CountTotal NormTotal
No Reads
droRho1
TATAA--CTG-----------------------------------------------------------------------CTCGTTTATAAATTTCAATTT------------GTTTT-CTTGGTACAGTGGTTC---AAA---------------------------------------------------T--AGGTA--------------------------------------------------------------AA-ATGAATAATAAAAATTTT------GTC-TGCTTCTGCAAAAAATGCAGCCTCGTAATCAGGGCTG------ACCAGTCTAATATGACTTGCTGGCTGTGTGAAAATATGGTGCACACCAAGTGCGCCGGTTTTAC---TGGCCGGACA-------AGTGATGACSizeHit CountTotal NormTotal
No Reads
droBia1
AATTTGATCC-TATTG-CCAA-----------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------TTTACTTTGAGGTATTTTTGATATT---------TTATTTCTTTTTG--TTTTCT---TATAATGG---------CTCTT------GTC-TGTTCTAAGAAAAATTGTACACTTGCGTCTTTAACTA------AAGACCCCTTAATTTTTTGCTGGCTCTGCGATTCGATGACGTACGTCCAATGTGCAGGATTCAC---CGGC----------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACTTT-TCCC-TCTTTCG-AA--------------ATTTAAAGCGTACGGAGTCGGTGCTCTTGCGGTACTTTTAACT-G-CTCGTTCGCAAATTTCGGTCCCTACATTTCTG-------TTTGGTACAGTGGGCA---AAA---------------------------------------------------TATTTACA--------------------------------------------------------------ATTATGGATA------CTTTT------GTC-TGCTCTATTAATAATTGCCATCAATTAATCAGAGCTG------ATCAGTCAAAACTGACCTGTTGCCTGTGTGAAAAAATGGCTCATACCAAGTGTGCCGGCTATAC---TGGCCGAACC-------AGTGATGACSizeHit CountTotal NormTotal
No Reads
droEug1
CTCTCAAACT-CTCTT-TCTTCTT-TCCTAT-AA---------TAT----------------------------------------------------------------TTT-------TCTGGCACAGTGGCTT---ACA---------------------------------------------------TCTTGCTA--------------------------------------------------------------ATTATT---TGCAAAATGTCTGATATTATT-TGTTGCATTAAAAAATGCAATAAAATTGTGTCGGTTG------ACCAAGAAAGCGTCCACTGTTGGCTGTGTGACAACATTGCGCACTCCAAGTGTGCAGGGTTTAAGTCAGCCACCATT-------CCGGATGCTSizeHit CountTotal NormTotal
No Reads
dm3
TGCAG-----------------------------------------------ACTGCTCTCGTGCGGTTCTTTTAACA-G-CTCGCTTGAAAGTTTTGATCT-----------TGTGTTTTCGTGCACAGTGGTCT---GAT---------------------------------------------------TTTAGATA--------------------------------------------------------------AACGTGGAAACCGTAAATGTT------GTC-TGCTTTTATAAAAAATGTTGCCTGGTTATAAAACCTG------AGCAGCCAAAAATGATTTGTTGGCTATGTGATAGAATGGTGCATACTAAAAGCGCTGGTTTTGA---TGGCCGTACA-------AGTGATGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...................................................................................................................TGTTTTCGTGCACAGTGGTCT---GA.................................................................................................................................................................................................................................................................................................23201.35270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002001001400010400000000310000110000000000000000000000000000000000000000000001100000000000000000001000000000000000000000000000220000000
...........................................................................................................................TGCACAGTGGTCT---GAT---------------------------------------------------TTTAG........................................................................................................................................................................................................................................21201.352700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000006000110000000000000000202000010000000000000000000000003000
..................................................................................................................................................................................................................................................................................................................................................................TGTTGGCTATGTGATAGAATGGTGC...................................................25201.35270000000000000000000000010000000000000020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000200000000000000005030500000000000000100000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000
.....................................................................................................................TTTTCGTGCACAGTGGTCT---GAT---------------------------------------------------TTTA.........................................................................................................................................................................................................................................26151.33200000000000000000000000000000000000000010000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100100000000000000000000000000000000000010000000000000006010000000101010000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001000000000
.....................................................................................................................TTTTCGTGCACAGTGGTCT---GAT---------------------------------------------------T............................................................................................................................................................................................................................................23201.25250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000200001000000000000000000000000000000000000000002000000000000002000000000200000202230000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001021000000
...............................................................................................................................................................................................................................................................................................................................TTATAAAACCTG------AGCAGCCAAAAATGA..............................................................................27201.25250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000700000100004000000000000000000000000000000000000000000020000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000030000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTGA---TGGCCGTACA-------AGTGAT...2241.2550000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TATAAAACCTG------AGCAGCCAAAAATGAT.............................................................................27171.24210000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000010100000000010205340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TATAAAACCTG------AGCAGCCAAAAAT................................................................................24201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001020000000006000000000001000000100120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGCTCTCGTGCGGTTCTTTTAACA-G-C............................................................................................................................................................................................................................................................................................................................................................26201.20240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706800000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTATAAAACCTG------AGCAGCCAAAAATG...............................................................................26201.20240000000000000000000000000000000000000000000000200000300000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000200000000000000000000000000000000000000000000000000040000000000000000600001000000000000000000000000000000000000000000000000000000000000000000000000100010000020000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AACCTG------AGCAGCCAAAAATGATTTGT.........................................................................26111.18130000000000000000000000000000000000000020000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000100000000000000000300000110000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................TAACA-G-CTCGCTTGAAAGTTTTG............................................................................................................................................................................................................................................................................................................................................23201.15230000000000000000000000010000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000040000000000000000000000000000000000000000008003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGAAAGTTTTGATCT-----------TGTGTTTTCGTG.................................................................................................................................................................................................................................................................................................................27201.15230000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000200001000000000000004000200020005100000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................CCTG------AGCAGCCAAAAATGATTTGTTG.......................................................................2671.1480000000000000000000000010000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTGTTG.......................................................................2481.1390000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000001100000000
................................................................................................................................................................................................................................................................................................................................TATAAAACCTG------AGCAGCCAAAAATGA..............................................................................26201.10220000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000300000803000000500000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CCTG------AGCAGCCAAAAATGATTTGTT........................................................................25101.10110000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000100000000000002010000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAATGATTTGTTGGCTATGTG...............................................................21121.08130000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000240000000000000001200000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTG..........................................................................21131.08140000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000002200040000000000000001000000000000000000000000000100000000
.....................................................................................................................TTTTCGTGCACAGTGGTCT---GAT---------------------------------------------------TTTAGA.......................................................................................................................................................................................................................................28151.07160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000000000000000100000000000003340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................T-----------TGTGTTTTCGTGCACAGTGGTCT---G..................................................................................................................................................................................................................................................................................................25201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020180000010002000000000000000000000000000000000000001000000010000000000000100000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................TATAAAACCTG------AGCAGCCAAAAATG...............................................................................25201.052100000000000000000000000000000000000010003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000200000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000200000000000000000000000001100000000
.................................................................................................................TGTGTTTTCGTGCACAGTGGTCT---GAT---------------------------------------------------.............................................................................................................................................................................................................................................26201.05210000000100000000000000000000000000000000000000001000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000010100000002000000000000000000000100110000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000500000000
.........................................................................TAACA-G-CTCGCTTGAAAGT................................................................................................................................................................................................................................................................................................................................................19201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000019000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................TAAAACCTG------AGCAGCCAAAAATGA..............................................................................24201.002000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000010000100000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TGTT------GTC-TGCTTTTATAAAAAATGTTGCA..................................................................................................................2921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TAGAATGGTGCATACTAAAAG.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TATAAAAAATGTTGCCTGGTTATAAAACC.....................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CATACTAAAAGCGCTGGTTTTGA---TGGCC.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTTTATAAAAAATGTTGCCTGGTTATAA.........................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GCCTGGTTATAAAACCTG------AGCAGCCAA....................................................................................2731.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTTGA---TGGCCGTACA-------AGTGATGA.2741.0040000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGGTTATAAAACCTG------AGCAGCCAAAAA.................................................................................2761.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTAGATA--------------------------------------------------------------AACGTGGAAACCGT.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAAAGCGCTGGTTTTGA---TGGCC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TATAAAAAATGTTGCCTGGTTATAAAA.......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAAAGCA.......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTAGATA--------------------------------------------------------------AACGTGGAAACCGTAAAT.....................................................................................................................................................2511.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCATACTAAAAGCGCTGGTTTTGA---TGG.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TATAAAAAATGTTGCCTGGTTATAAA........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TAAAAAATGTTGCCTGGTTATAAAA.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAAAGA........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCATACTAAAAGCGCTGGTTT................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GCATACTAAAAGCGCTGGTTTTGA---TG........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATAGAATGGTGCATACTAAAAGCGC......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TGGTGCATACTAAAAGCGCTGGTTTTG..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AACGTGGAAACCGTAAATGTT------GTC-........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTGA---TGGCCGTACA-------AGTGATG..2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000002000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAAATGTTGCCTGT...............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCATACTAAAAGCGCTGGTTTTGA---TG........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTATAAAAAATGTTGCCTGG...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAAATGTTGCCTGGTT.............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTATAAAAAATGTTGCCTGGTTATAA.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTGGCTATGTGATAGAATGGT.....................................................23201.00200000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000108000000000300000000000000000000000000000000000100000000000001000000000000010000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGCATACTAAAAGCGCTGGTT.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAAATGTTGCCTGGC..............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TAGAATGGTGCATACTAAAAGCGCG.....................................2511.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GCATACTAAAAGCGCTGG...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ATGTTGCCTGGTTATAAAACCTG------A............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CTAAAAGCGCTGGTTTTGA---TGGCCGTA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AACGTGGAAACCGTAAATGTT------GTC-T.......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GTGATAGAATGGTGCATACTAAA...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CTTTTATAAAAAATGTTGCCTGGTTA............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTTCCGAGCG-T------------------------------------GCAGACTGCTCTCTTGCGGTTCTTTTAACAGCGCTCTCTTGAAAGTTTTGATCT-----------TGTGTT-GTTTACACAGTTGTCT---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAAATGTT------ATC-TGCTTTTATAAAAATTGTTGCCAGGTTATAATACCTG------AGCAGCCAAAAATGATTTGTTGGCTATGTGGTAGAATGGTGCATACTAAGTGCGCTGACTTTAA---TGGCCGAACA-------AGCGATGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAATTGTT.....................................................................................................................192010.0520100006713400000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAG...........................................24210.0020000000500013020000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTT.....................................................................................................................21206.601320000132000000000000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAATTGTTGCCA.................................................................................................................23206.501300000013000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAA............................................2325.501100000001006040000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATTGTTGCCAGG...............................................................................................................24165.19830000000500330000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTGCCAG................................................................................................................26194.95940071630101831000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTGCCA.................................................................................................................25194.32820011640401200000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGTAGAATGGTGCATACTAAGTGCGC......................................2724.00800020021102000000
................................................................................................................................................................................................................................................................................................................................TATAATACCTG------AGCAGCCAAAAATGA..............................................................................2653.8019000000411310000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGTAGAATGGTGCATACTAAGTGC........................................2523.50700000042001000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTG....................................................................................................................22203.4569000066000201000000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAATTGTTGC...................................................................................................................21203.3567000067000000000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGT......................................................................................................................20203.3066000066000000000000
..............................................................................................TTTGATCT-----------TGTGTT-GTTTACACAGT...........................................................................................................................................................................................................................................................................................................2523.00600000010131000000
.........................................................................................AAAGTTTTGATCT-----------TGTGTT-......................................................................................................................................................................................................................................................................................................................1992.8926000000000026000000
.........................................................................................AAAGTTTTGATCT-----------TGTGTT-GTT...................................................................................................................................................................................................................................................................................................................2222.50500000030002000000
..................................................................................................................................................................................................................................................................................................................................TAATACCTG------AGCAGCCAAAAATGAT.............................................................................2522.00400000002200000000
.................................................................................................................TGTGTT-GTTTACACAGTTGTCT---GA.................................................................................................................................................................................................................................................................................................2422.00400000011200000000
...................................................................................................TCT-----------TGTGTT-GTTTACACAGTTGTCT---GA.................................................................................................................................................................................................................................................................................................2722.00400000003100000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAGTG.........................................2622.00400000000001030000
........................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTAA---TGGCCGAACA-------AGCGATG..2632.00600000013200000000
.........................................................................................AAAGTTTTGATCT-----------TGTGT........................................................................................................................................................................................................................................................................................................................1891.8917000000000017000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTGCC..................................................................................................................24201.7034002610020310010000
........................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTAA---TGGCCGAACA-------AGCGA....2431.67500010000020020000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTGC...................................................................................................................23201.6032000000402331100000
.........................................................................................................................................................................................................................................................................................................................................................................TATGTGGTAGAATGGTGCATACTAAG...........................................2621.50300000011001000000
......................................................................TTTTAACAGCGCTCTCTTGAAAGTT...............................................................................................................................................................................................................................................................................................................................................2521.50300000003000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAGT..........................................2521.50300000000001020000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTGCCAGG...............................................................................................................27151.271900100081610020000
...................................................................................................................................................................................................................................................................................................TC-TGCTTTTATAAAAATTGTTGCCAGGT..............................................................................................................28131.151500000060531000000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAATTGTTGCCAGGT..............................................................................................................26141.1416000000114100000000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATTGTTGCCAGGT..............................................................................................................25141.071500000009140010000
.......................................................................................................................................T---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGA........................................................................................................................................................2721.00200000001100000000
...............................................................................................................................................................................................................................................................................................................................TTATAATACCTG------AGCAGCCAAAAATGA..............................................................................2751.00500000032000000000
...........................................................................................................................................................................................................................................................................................................................................................AATGATTTGTTGGCTATG.................................................................1891.00900009000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGTAGAATGGTGCATACTAAGTGCG.......................................2621.00200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTA.............................................2221.00200000010000010000
............................................................................................................................................................................................................................................................................................................................................................................................TACTAAGTGCGCTGACTTTAA---TGGC......................2531.00300000021000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATA................................................1921.00200000000001010000
...................................................................................................................................................................................................TAAACA--------------------------------------------------------------AACATGGAAATAAGAA.......................................................................................................................................................2221.00200000000200000000
.....................................................................................................T-----------TGTGTT-GTTTACACAGTTGTCT---GA.................................................................................................................................................................................................................................................................................................2521.00200000011000000000
..................................................................................................................................................................................................................................................................................................................................TAATACCTG------AGCAGCCAAAAATGA..............................................................................2450.80400000013000000000
.........................................................................................AAAGTTTTGATCT-----------TGT..........................................................................................................................................................................................................................................................................................................................1690.78700000000007000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGCATACTAAGTGCGC......................................17200.7515000000000015000000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAATTGTTGCCAGG...............................................................................................................25160.691100000002360000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTAA---TGGCCGAACA-------AGCGATGA.2730.67200000000010010000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAAA..........................................2530.67200000000000020000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATTGTTGCCAGGTT.............................................................................................................26140.57800000004040000000
......................................................................................................................................................................................................................................................................................................................................ACCTG------AGCAGCCAAAAATGATTTGTT........................................................................2670.57400000001003000000
.....................................................................................................................................................................................................................................................................................................................................TACCTG------AGCAGCCAAAAATGATTTGT.........................................................................2620.50100000000001000000
...........................................................................................................................................................................................................................................................................TGGAAATAAGAAATGTT------ATC-TGCTTT..................................................................................................................................2620.50100000000001000000
..................................................................................................................................................................................................................................................................................................................................TAATACCTG------AGCAGCCAAAAATGATTTG..........................................................................2820.50100000000010000000
.................................................................................................................TGTGTT-GTTTACACAGTTGTCT---GAT---------------------------------------------------GT...........................................................................................................................................................................................................................................2720.50100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGTAGAATGGTGCATACTAAGT..........................................2320.50100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAGATA........................................2720.50100000000000010000
.......................................................................................................................................T---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAA.......................................................................................................................................................2820.50100000001000000000
...................................................................................................................................TGTCT---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGA...............................................................................................................................................................2420.50100000000001000000
.......................................................................................TGAAAGTTTTGATCT-----------TGTGTT-GTTTA.................................................................................................................................................................................................................................................................................................................2620.50100000001000000000
.................................................................................................................TGTGTT-GTTTACACAGTTGTCT---GAT---------------------------------------------------G............................................................................................................................................................................................................................................2620.50100000000010000000
...................................................................................................................................................................................................TAAACA--------------------------------------------------------------AACATGGAAATAAGAAAT.....................................................................................................................................................2420.50100000000010000000
..................................................................................................................................TTGTCT---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAA.............................................................................................................................................................2720.50100000000001000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTGTTGGCTA...................................................................2860.50300000010002000000
...............................................................................................TTGATCT-----------TGTGTT-GTTTACACAGT...........................................................................................................................................................................................................................................................................................................2420.50100000000001000000
.........................................................................................AAAGTTTTGATCT-----------TGTGTT-GTTTACA...............................................................................................................................................................................................................................................................................................................2620.50100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAGTGC........................................2720.50100000000001000000
......................................................................................................................T-GTTTACACAGTTGTCT---GAT---------------------------------------------------GTTAA........................................................................................................................................................................................................................................2520.50100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGTAGAATGGTGCATACTAAGTG.........................................2420.50100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTGGCTATGTGGTAGAATGGTGCAA.................................................2720.50100000000001000000
................................................................................................................................................................................................................................................................................................................................................................TTTGTTGGCTATGTGGTAGAATG.......................................................2320.50100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................TTGTTGGCTATGTGGTAGAATGGTG....................................................2520.50100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGTAGAATGGTGCATACTAAGTGA........................................2520.50100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAT...........................................2420.50100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACT..............................................2120.50100000000000001000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTGTTGGC.....................................................................2660.50300000000102000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCA..................................................1720.50100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTATGTGGTAGAATGGTGCATAC...............................................2620.50100000001000000000
.........................................................................................AAAGTTTTGATCT-----------TGTGTT-GTTTA.................................................................................................................................................................................................................................................................................................................2420.50100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGGTAGAATGGTGCATACTAAGTGCGC......................................2920.50100000000001000000
.......................................................................................................................................T---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAAAA.....................................................................................................................................................3020.50100000010000000000
.......................................................................................................................................T---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAAA......................................................................................................................................................2920.50100000000010000000
.............................................................................................................................................T---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAA.......................................................................................................................................................2520.50100010000000000000
..................................................................................TCTCTTGAAAGTTTTGATCT-----------TGTGT........................................................................................................................................................................................................................................................................................................................2520.50100000000100000000
......................................................................................TTGAAAGTTTTGATCT-----------TGTGTT-GTT...................................................................................................................................................................................................................................................................................................................2520.50100000010000000000
................................................................................GCTCTCTTGAAAGTTTTGATCT-----------TGTGT........................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
................................................................................................................................................................................................................................................................................................................................TATAATACCTG------AGCAGCCAAAAATGATT............................................................................2820.50100000001000000000
...........................................................................................................................................................................................................................................................................TGGAAATAAGAAATGTT------ATC-TGCTT...................................................................................................................................2520.50100000001000000000
...................................................................................................................................................................................................TAAACA--------------------------------------------------------------AACATGGAAATAAGAAATGT...................................................................................................................................................2620.50100000001000000000
.TTCCGAGCG-T------------------------------------GCAGACTGCTCTCT................................................................................................................................................................................................................................................................................................................................................................................2420.50100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................TGATTTGTTGGCTATGTGGTAGAATGG......................................................2720.50100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTGGCTATGTGGTAGA..........................................................1820.50100000000001000000
...........................................................................................AGTTTTGATCT-----------TGTGTT-GTTTACACAGT...........................................................................................................................................................................................................................................................................................................2820.50100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGTGCGCTGACTTTAA---TGGCCGAA..................2630.33100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................ACTAAGTGCGCTGACTTTAA---TGGCC.....................2530.33100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTGACTTTAA---TGGCCGAACA-------AGCGATGA.2830.33100000010000000000
..................................................................................................................................................................................................................................................................................................ATC-TGCTTTTATAAAAATTGTTGC...................................................................................................................2430.33100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTGCGCTGACTTTAA---TGGCCGAACA-------.........2630.33100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGTGCGCTGACTTTAA---TGGCCGAACA-------.........2830.33100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................GCTGACTTTAA---TGGCCGAACA-------AGCGAA...2730.33100000000000010000
................................................................................................................................................................................................................................................................................................................................................................TTTGTTGGCTATGTGGTA............................................................1830.33101000000000000000
........................................................................................................................................................................................................................................................................................TGTT------ATC-TGCTTTTATAAAAATTGT......................................................................................................................2530.33100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGCGCTGACTTTAA---TGGCCGAACA-------AGC......2730.33100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTAA---TGGCCGAACA-------AGCGAA...2530.33100000000000010000
......................................................................................................................................................................................................................................................................................................TGCTTTTATAAAAATTGTTGCCAGGTTA............................................................................................................28140.29400000010210000000
.......................................................................................................................................................................................................................................................................................................................................CCTG------AGCAGCCAAAAATGATTTGTT........................................................................2570.29200000000101000000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATTGTTGCCAGGTTA............................................................................................................27140.21300000002010000000
........................................................................................................................................................................................................................................................................................................................................................AAAAATGATTTGTTGGCTA...................................................................19100.20200000000002000000
...............................................................................................................................................................................................................................................................................................................................TTATAATACCTG------AGCAGCCAAAAATG...............................................................................2650.20100000000100000000
......................................................................................TTGAAAGTTTTGATCT-----------TGTGT........................................................................................................................................................................................................................................................................................................................2150.20100000010000000000
................................................................................................................................................................................................................................................................................................................................TATAATACCTG------AGCAGCCAAAAATGAA.............................................................................2750.20100000000100000000
..................................................................................................................................................................................................................................................................................................................................TAATACCTG------AGCAGCCAAAAA.................................................................................2150.20100000000010000000
.................................................................................................................................................................................................................................................................................................................................ATAATACCTG------AGCAGCCAAAAATGA..............................................................................2550.20100000001000000000
.........G-T------------------------------------GCAGACTGCTCTC.................................................................................................................................................................................................................................................................................................................................................................................15200.15300000000003000000
........CG-T------------------------------------GCAGACTGCTCT..................................................................................................................................................................................................................................................................................................................................................................................15200.15300000000003000000
.........................................................................................................................................................................................................................................................................................................................................................................................GCATACTAAGTGCGC......................................15200.15300000000003000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTGTTGGT.....................................................................2670.14100000000100000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTGTTGG......................................................................2570.14100000000001000000
...........T------------------------------------GCAGACTGCTCTCT................................................................................................................................................................................................................................................................................................................................................................................1570.14100000010000000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGATTTGTTGAA.....................................................................2680.13100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAAAATGATTTGTTGGCTATGT................................................................2380.13100000010000000000
...........T------------------------------------GCAGACTGCTCTCTTGAT............................................................................................................................................................................................................................................................................................................................................................................1990.11100000010000000000
.........................................................................................AAAGTTTTGATCT-----------TG...........................................................................................................................................................................................................................................................................................................................1590.11100000000001000000
.........................................................................................AAAGTTTTGATCT-----------TGTGTC-......................................................................................................................................................................................................................................................................................................................1990.11100000000001000000
..............................................................TGCGGTTCTTTTAACA................................................................................................................................................................................................................................................................................................................................................................16200.10200000000002000000
.....................................................................................................................................................................................................................................................................................................................................................................................TGGTGCATACTAAGTGCGCT.....................................20200.10200000000002000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATGA..............................................................................17200.10200000000002000000
.........................................................................................................................................................................................................................................................................................................................................TG------AGCAGCCAAAAATG...............................................................................16200.10200000000002000000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATT........................................................................................................................15200.10200000000002000000
.......GCG-T------------------------------------GCAGACTGCTCT..................................................................................................................................................................................................................................................................................................................................................................................16200.10200000000101000000
........................................................................................................................................................................................................................................................................................................................................................AAAAATGATTTGTTGGCT....................................................................18110.09100000000001000000
.....................................................................................................................................................................................................................................................................................................................TGTTGCCAGGTTATA..........................................................................................................15150.07100000000001000000
............................................................................................................................................................................................................................................................................................................TATAAAAATTGTTGCCAGGTTATAA.........................................................................................................25150.07100000001000000000
.............................................................................................................................................................................................................................................................................................................ATAAAAATTGTTGCCAGGTTA............................................................................................................21160.06100000000000001000
............................................................................................................................................................................................................................................................................................................TATAAAAATTGTTGCCAGGT..............................................................................................................20170.06100000001000000000
................................................................................................................................................................................................................................................................................................................AAAATTGTTGCCAGGT..............................................................................................................16170.06100000000001000000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATTGTTGCCAGGTA.............................................................................................................26170.06100000001000000000
.........................................................................................................................................................................................................................................................................................................TTTTATAAAAATTGTTGCCAGGT..............................................................................................................23170.06100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................ATGGTGCATACTAAGTGCGCTG....................................22190.05100000000001000000
.........................................................................................................................................................................................................................................................................................................TTTTATAAAAATTGTTGCCAGG...............................................................................................................22190.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGCATACTAAGTGCG.......................................16200.05100000000001000000
.......GCG-T------------------------------------GCAGACTGCTCTC.................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................CTG------AGCAGCCAAAAATGA..............................................................................18200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................GCATACTAAGTGCGCA.....................................16200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................TTATAAAAATTGTTGCCA.................................................................................................................18200.05100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGCATACTAAGTGCGT......................................17200.05100000000001000000
......AGCG-T------------------------------------GCAGACTGCTCT..................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................GGTGCATACTAAGTGCG.......................................17200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................GAATGGTGCATACTAAGTGCGC......................................22200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................TTTATAAAAATTGTTGCC..................................................................................................................18200.05100000000100000000
..............................................................TGCGGTTCTTTTAACAGC..............................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................TTTTATAAAAATTGTTGC...................................................................................................................18200.05100000000001000000
.......................................................................................................................................................................................................................................................................................................GCTTTTATAAAAATTGTTGCCAG................................................................................................................23200.05100000001000000000
..........................................................................................................................................................................................................................................................................................................TTTATAAAAATTGTTGC...................................................................................................................17200.05100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................AGAATGGTGCATACTAAGTGCGC......................................23200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................GGTGCATACTAAGTGC........................................16200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................ATAAAAATTGTTGCCAG................................................................................................................17200.05100000000001000000
droSec2
CGT---------------------------------------------GCAGACTGCTCTCTTGCGGTTCTTTTAACAGCGCTCTCTTGAAAGTTTTGATCT-----------TGTGTT-GTTTACACAGTTGTCT---GAT---------------------------------------------------GTTAAACA--------------------------------------------------------------AACATGGAAATAAGAAATGTT------ATC-TGCTTTTATAAAAATTGTTGCCAGATTATAATACCTG------AGCAGCCAAAAATGATTTGTTGGCTATGTGATAGAATGGTGCATACTAAGTGCGCTGACTTTAA---TGGCCGTACA-------AGTGATGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAGTG.........................................24205.20104104000
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAGTGC........................................25203.857772050
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAGTGCGC......................................27203.757575000
......................................................................TTTTAACAGCGCTCTCTTGAAAGTTTT.............................................................................................................................................................................................................................................................................................................................................2712.0020020
......................................................................TTTTAACAGCGCTCTCTTGAAAG.................................................................................................................................................................................................................................................................................................................................................2311.0010001
......................................................................TTTTAACAGCGCTCTCTTGAAAGTT...............................................................................................................................................................................................................................................................................................................................................2511.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTAA---TGGCCGTACA-------AGTGATGAC2811.0011000
..............................................................................................................................................................................................................................................................................................................................................................................GATAGAATGGTGCATACTAAGTG.........................................23200.3066000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGATAGAATGGTGCATACTAA............................................23200.3066000
..............................................................................................................................................................................................................................................................................................................................................................................GATAGAATGGTGCATACTAAGTGC........................................24200.2555000
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAGTGCGT......................................27200.1530030
...........................................................................................................................................................................................................................................................................................................................................................................TGTGATAGAATGGTGCATACTAAGTGC........................................27200.1020200
.......................................................................................................................................................................................................................................................................................................................................................CAAAAATGATTTGTTGGCTATGTGA..............................................................25200.0511000
...............................................................................................................................................................................................................................................................................................................................................................................ATAGAATGGTGCATACTAAGTGCGC......................................25200.0511000
................................................................................................................................................................................................................................................................................................................................................................................TAGAATGGTGCATACTAAGTGCGC......................................24200.0510010
...........................................................................................................................................................................................................................................................................................................................................................................TGTGATAGAATGGTGCATACTAAGT..........................................25200.0510001
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCATACTAAGTGCGA......................................27200.0511000
...........................................................................................................................................................................................................................................................................................................................................................AATGATTTGTTGGCTATGTG...............................................................20200.0510001
.............................................................................................................................................................................................................................................................................................................................................................................................................TTAA---TGGCCGTACA-------AGTGATG..21200.0510100
............................................................................................................................................................................................................................................................................................................................................................................................................TTTAA---TGGCCGTACA-------AGTGATG..22200.0510001
.......................................................................................................................................................................................................................................................................................................................................................CAAAAATGATTTGTTGGCTAT..................................................................21200.0510001
droYak3
GTGCA-CCCGCTCTCTCG-CTCTC-CCACAC-AAAATTCTAAGGT---GCAGACTGTGCTCTTGCGGTATATT--------------------TTCTGATTT-----------TGTCT--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAATTA--------------------------------------------------------------AACATGGAAAC---CAATGTT------GTC-TGCTTCCATAACAAATGCCGTCAGGTAATAAAGCCTG------AGCAGTCGAAAATGACCTGTTGGCTATGTGATAGAATGGTGCACACTAAGTGCGCTGGTTTTAA---CGGCCGAACA-------AGTGATGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................TGTT------GTC-TGCTTCCATAACAAATGCCGT...................................................................................................................28200.9018000000000018
......................................................................................................................................................................................................................................................................................................................................................................GGCTATGTGATAGAATGGTGCACA................................................24200.25505000000000
.........................................................................................................................................................................................................................................................................................................TTCCATAACAAATGCCGTCAGGTA.............................................................................................................24200.20402200000000
.........................................................................................................................................................................................................................................................................................................TTCCATAACAAATGCCGTCAGGTAAT...........................................................................................................26200.20404000000000
.....................................................................................................................T--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCC..........................................................................................................................................................................................................................................23200.20400400000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTATGTGATAGAATGGTGCACAC...............................................24200.15303000000000
......................................................................................................................................................................................................................................................................................................................................................................GGCTATGTGATAGAATGGTGCAC.................................................23200.15303000000000
...........................................................................................................................................................................................................................................................................................................................CAGGTAATAAAGCCTG------AGCAGTCGA....................................................................................2580.13101000000000
......................................................................................................................................................................................................................................................................................................................................GCCTG------AGCAGTCGAAAATGACC............................................................................2280.13100000010000
..................................................................................................................................................................................................................................................................................................................................TAAAGCCTG------AGCAGTCGAAAATGACC............................................................................2680.13101000000000
........................................................................................................................................................................................................................................................................................................................................................................CTATGTGATAGAATGGTGCAC.................................................21200.10201100000000
..............................................................................................................................................................................................................................................................................................................TAACAAATGCCGTCAGGTAATAAAGCC.....................................................................................................27200.10201100000000
.....................................................................................................................................TCA---AAA---------------------------------------------------CCCAATTA--------------------------------------------------------------AACATGGAAAC---C........................................................................................................................................................26200.10201100000000
.................................................................................................................................................................................................................................................................................C---CAATGTT------GTC-TGCTTCCATAA.............................................................................................................................22200.10202000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGATAGAATGGTGCACACTAAGTGCG.......................................28200.10202000000000
.........................................................................................................................................................................................................................................................................................................TTCCATAACAAATGCCGTCAGGTAA............................................................................................................25200.10202000000000
................................................................................................................................................................................................................................................................................AC---CAATGTT------GTC-TGCTTCCATAACAAAT........................................................................................................................28200.05100100000000
.....................................................................................................................T--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAATT......................................................................................................................................................................................................................................27200.05100100000000
..........................................................................................................................................................................................................................................................................................................TCCATAACAAATGCCGTCAGGTAT............................................................................................................24200.05101000000000
.....................................................................................................................T--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAATTA--------------------------------------------------------------.......................................................................................................................................................................28200.05101000000000
.......................................................................................................................................................................................................................................................................................................GCTTCCATAACAAATGCCGTCAGGTAA............................................................................................................27200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTGGTTTTAA---CGGCCGAACA-------AG.......22200.05101000000000
....................................................................................................TT-----------TGTCT--TTTGGTACAGTGGTCA---...................................................................................................................................................................................................................................................................................................23200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................GGCTATGTGATAGAATGG......................................................18200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATAGAATGGTGCACACTAAGTG.........................................23200.05101000000000
.....................................................................................................................T--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAAT.......................................................................................................................................................................................................................................26200.05100100000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTCCATAACAAATGCCG....................................................................................................................22200.05101000000000
........................................................................................................................................................................................................................................................................................TGTT------GTC-TGCTTCCATAACAAATGC......................................................................................................................25200.05101000000000
..................................................................................................................................................................................................................................................................................................GTC-TGCTTCCATAACAAATGCCGT...................................................................................................................24200.05101000000000
.........................................................................................................................................................................................................................................................................CATGGAAAC---CAATGTT------GTC-TGCTTC..................................................................................................................................25200.05101000000000
........................................................................................................................TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAAT.......................................................................................................................................................................................................................................25200.05101000000000
.......................................................................................................................................................................................................................................................................AACATGGAAAC---CAATGTT------GTC-TGCT....................................................................................................................................25200.05100100000000
..................................................................................................................................................................................................................................................................................................................AAATGCCGTCAGGTAATAAAGCC.....................................................................................................23200.05100100000000
........................................................................................................................................................................................................................................................................................................................................................................CTATGTGATAGAATGGTGCACAC...............................................23200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................................TATGTGATAGAATGGTGCACACTA.............................................24200.05101000000000
.......................................................................................................................................................................................................TA--------------------------------------------------------------AACATGGAAAC---CAATGTT------GTC-T.......................................................................................................................................24200.05101000000000
................................................................................................................................................................................................................................................................................AC---CAATGTT------GTC-TGCTTCCATAACAA..........................................................................................................................26200.05101000000000
................................................................................................................................................................................................................................................................................AC---CAATGTT------GTC-TGCTTCCATAAT............................................................................................................................24200.05101000000000
.......................................................................TT--------------------TTCTGATTT-----------TGTCT--TTTGGTA...............................................................................................................................................................................................................................................................................................................23200.05101000000000
................................................................................................................................................................................................................................................................................AC---CAATGTT------GTC-TGCTTCCATAACA...........................................................................................................................25200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTATGTGATAGAATGGTGC...................................................22200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA---CGGCCGAACA-------AGTG.....20200.05100100000000
...................................................................................................................................................................................................................................................................................................TC-TGCTTCCATAACAAATGCCGTCAGG...............................................................................................................27200.05101000000000
.......................................................................................................................................................................................................TA--------------------------------------------------------------AACATGGAAAC---CAATGTT------GTC-TGCT....................................................................................................................................27200.05100100000000
.................................................................................................................................................................................................................................................................................................................CAAATGCCGTCAGGTAATAAAGCC.....................................................................................................24200.05100100000000
...........................................................................................................................................................................................................................................................................................................CCATAACAAATGCCGTCAGGTA.............................................................................................................22200.05101000000000
.............................................................................................................................TACAGTGGTCA---AAA---------------------------------------------------CCCAATTA--------------------------------------------------------------AACA...................................................................................................................................................................26200.05101000000000
..........................................................................................................................................................................................................................................................................................................TCCATAACAAATGCCGTCAGGTA.............................................................................................................23200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTATGTGATAGAATGG......................................................19200.05101000000000
..........................................................................................................................TGGTACAGTGGTCA---AAA---------------------------------------------------CCCAAT.......................................................................................................................................................................................................................................23200.05101000000000
........................................................................................................................................................................................................................................................................................TGTT------GTC-TGCTTCCATAACAAATG.......................................................................................................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................................TCCATAACAAATGCCGTCAGGTAAT...........................................................................................................25200.05101000000000
...................................................................................................................TCT--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCA.........................................................................................................................................................................................................................................26200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGATAGAATGGTGCACACTAA............................................23200.05101000000000
...................................................................................................................TCT--TTTGGTACAGTGGTCA---AAA---------------------------------------------------CCCAA........................................................................................................................................................................................................................................27200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................ACCTGTTGGCTATGTGATAGAAT........................................................23200.05101000000000
..........................................................................................................................................................................................................................................................................................................TCCATAACAAATGCCGTCAGGT..............................................................................................................22200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGATAGAATGGTGCACACTAAGTGCGC......................................29200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTTTTAA---CGGCCGAACA-------AGTGAT...27200.05101000000000
................................................................................................................................................................................................................................................................................AC---CAATGTT------GTC-TGCTTCCATAAC............................................................................................................................24200.05100100000000
........................................................................................................................................................................................................A--------------------------------------------------------------AACATGGAAAC---CAATGTT------GTC-TGCTT...................................................................................................................................27200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGATAGAATGGTGCACACTAAGT..........................................23200.05101000000000
.......................................................................................................................................................................................................TA--------------------------------------------------------------AACATGGAAAC---CAATGTT------GTC-TGCC....................................................................................................................................27200.05100100000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTATGTGATAGAATGGTGCACA................................................25200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................AGAATGGTGCACACTAAGTGCGCT.....................................24200.05101000000000
.......................................................................................................................................................................................................................................................................AACATGGAAAC---CAATGTT------G...........................................................................................................................................19200.05101000000000
droEre2
TTTAA--CAG-----------------------------------------------------------------------CTGGTTTGCAATTTTTGATTT-----------TATGT--CTTTGTACAGTGGTCT---GAA---------------------------------------------------AC-AAACA--------------------------------------------------------------AAAGTGGAAAC---TAATGTT------ATC-TGCTTCCAAAACGAATGCCGTCAAATAATAAAGCCTG------AACAACCCAAAATGACTTGTTGGCTGTGTGATAAAATGGTGCACACTATGTGCGCAGGTTTTAG---AGGGCGAACA-------AGTTATAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................TGGCTGTGTGATAAAATGGTG....................................................2160.3321000100
....................................................................................................................................................................................................................................................................................................................................................................TTGGCTGTGTGATAAAATGGT.....................................................2170.1410000100
......................................................................................................................................................................................................................................................................................................................................................................GGCTGTGTGATAAAATGGTGC...................................................2190.1110000010
........................................................................................................................................................................................................................................................................................................................................................................CTGTGTGATAAAATGGTGCAC.................................................2190.1111000000

Generated: 05/18/2015 at 01:32 AM