ID:

dps_1779

 Coordinate:

Unknown_group_129:24993-25155 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1

Flybase annnotation

CDS [Dpse\GA27701-cds]; exon [dpse_GLEANR_6730:3]; exon [dpse_GLEANR_6730:2]; CDS [Dpse\GA27701-cds]; intron [Dpse\GA27701-in]

No Repeatable elements found

mature
  1. Unknown_group_4:125659-125681 -
  2. dps_1779  Unknown_group_129:25117-25139 -
  3. Unknown_group_109:8167-8189 -
  4. Unknown_group_31:14812-14834 +
  5. Unknown_group_35:14219-14241 +
  6. Unknown_group_33:13715-13737 +
  7. Unknown_group_122:1441-1463 +
  8. Unknown_group_339:10326-10348 +
  9. Unknown_group_339:18550-18572 +
  10. Unknown_singleton_2537:1482-1504 -
  11. Unknown_group_136:9694-9716 +
  12. XR_group6:8962589-8962611 -
  13. Unknown_singleton_1269:671-693 -
  14. Unknown_singleton_3670:250-272 -
  15. Unknown_singleton_1969:1263-1285 +
  16. Unknown_singleton_1270:170-192 +
  17. Unknown_singleton_2856:1769-1791 -
  18. Unknown_singleton_1746:630-652 -
  19. Unknown_singleton_321:92-114 +
  20. Unknown_singleton_1751:1059-1081 -
  21. Unknown_group_36:15399-15421 -
  22. Unknown_singleton_323:216-238 -
star

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACACCTCGGGCCGTCACGAGGAGAGGATGGCACGGAGGGGCATCCTAGGGGTGCGTCGCCGCCCAGCTCAAGGCAACCACGGTCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGATCCCGCAAGCAGAACCGGGCAACACCACGCAGTACGCAGGCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGGGCAACACCACGCAGTATGACCCAGCAACTGGAGCGATACCGAGA
******************************************************************.....(((......((((...)))).)))..............................****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM444067
head
 V112
male body		 M062
head
 GSM343916
embryo
 SRR902011
testis
..................................................................CTCAAGGCAACCACGGTCCACGA.............................................................................................................................................................................. 23 0 20 8.20 164 159 2 2 0 0 1 0 0
..................................................................CTCAAGGCAACCACGGTCCACG............................................................................................................................................................................... 22 0 20 4.30 86 82 1 1 0 1 0 1 0
..................................................................CTCAAGGCAACCACGGTCCACGAC............................................................................................................................................................................. 24 0 20 2.70 54 52 0 2 0 0 0 0 0
.....................................................................................................AAACGAGACACCACTCCCCGATCC.......................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCAGTATGACCCAGCAACTGGA............ 22 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGCAGTATGACCCAGCAACTGGAGA.......... 25 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCAGTATGACCCAGCAACTGGAG........... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CAGTATGACCCAGCAACTGGAGCGA........ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ACCACGCAGTATGACCCAGCAACTGGAG........... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................ACACAAACGAGACACCACTCCCCGATC........................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................AAACGAGACACCACTCCCCGATCCC......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGCAGTATGACCCAGCAACTGGAGCG......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................AAACGAGACACCACTCCCCGATC........................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................ACACAAACGAGACACCACTCCCCGA.............................................................. 25 0 2 1.00 2 2 0 0 0 0 0 0 0
.........................................................................................................GAGACACCACTCCCCGATCCC......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CCACGCAGTATGACCCAGCAAC................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................CGCAGTACGCAGGCCACGACCAGCC......................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................CAGAACCGGGCAACACCACGCAGTAC.......................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
......CGGGCCGTCACGGGGAGAGGATGGCA....................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................CCGGGCAACACCGCGCAGTACGCAGG..................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CCACGCAGTATGACCCAGCAACA............... 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.............TCACGAGGAGAGGATGGCACGGAT.................................................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................TCCCCGATCCCGCAAGCAGAACCGGG.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................AACGAGACACCACTCCCCGATCCC......................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACGAGACACCACTCCCCGAC............................................................. 22 0 2 1.00 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGCAGTATGACCCAGCAACTGGAGC.......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................ACAAACGAGACACCACTCCCCGATC........................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GTATGACCCAGCAGCTCGA............ 19 2 1 1.00 1 1 0 0 0 0 0 0 0
..............CACAAGGAGCGGATTGCACGG.................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................ACACCACGCAGTATGACCCAGC................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.............TCACGAGGAGAGGATGGCACGGAGG................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................CAGAACCGGGCAACACCACGCAGTACGC........................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TATGACCCAGCAACTGGAGCGATACCGA.. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................ACACAAACGAGACACCACTCCCCGATCC.......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................CGCAGTACGCAGGCCACGACCA............................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................ACACAAACGAGACACCACTCCCCGA............................................................................................................................................. 25 0 2 1.00 2 2 0 0 0 0 0 0 0
...........................................................................................................GACACCACTCCCCGATCCCGCA...................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACCA........................................................................................................................................................................... 26 0 20 1.00 20 20 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CAGTATGACCCAGCAACTGGAGC.......... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................CACGCAGTACGCAGGCCACGACC............................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................ACACCACGCAGTACGCAGGCCA.................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACCAGC......................................................................................................................................................................... 28 0 20 0.95 19 17 0 2 0 0 0 0 0
.......................................................................................................................................................................................CGAGACACCACTCCCCGACCCC.......................................................... 22 0 3 0.67 2 2 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACCAG.......................................................................................................................................................................... 27 0 20 0.55 11 11 0 0 0 0 0 0 0
...................................................................TCAAGGCAACCACGGTCCACGA.............................................................................................................................................................................. 22 0 20 0.50 10 10 0 0 0 0 0 0 0
................................................................................................................................................................................ACACAAACGAGACACCACTC................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................GCCAAACACAAACGAGACACCACTCCC................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACGAGACACCACTCCCCGACCCCG......................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................ACACAAACGAGACACCACTCCC................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACGAGACACCACTCCCCGACCCC.......................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACGAGACACCACTCCCCGACC............................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................ACACAAACGAGACACCACTCCC................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................AACGAGACACCACTCCCCGACCC........................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GCCAAACACAAACGAGACACCACTCCC................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACGAGACACCACTCCCCGACCC........................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................ACACAAACGAGACACCACTC.................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................AACGAGACACCACTCCCCGACC............................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................AAACGAGACACCACTCCCCGA.............................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................AAACGAGACACCACTCCCCGA............................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..ACCTTGGGTCGTCACG..................................................................................................................................................................................................................................................... 16 2 13 0.31 4 0 4 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGACCACGAC............................................................................................................................................................................. 24 1 20 0.30 6 1 4 0 0 0 1 0 0
..................................................................CTCAAGGCAACCACGGTCC.................................................................................................................................................................................. 19 0 20 0.30 6 5 0 0 0 0 0 1 0
...................................................................TCAAGGCAACCACGGTCCACG............................................................................................................................................................................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGACCACGA.............................................................................................................................................................................. 23 1 20 0.20 4 4 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACCAGCC........................................................................................................................................................................ 29 0 20 0.20 4 3 0 1 0 0 0 0 0
...................................................................TCAAGGCAACCACGGTCCACGACCA........................................................................................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0
...........CGTCACGAGGAGCTAATGGC........................................................................................................................................................................................................................................ 20 3 12 0.17 2 1 0 0 0 1 0 0 0
...........................TGGCACGGAGGGGCATCCTAGG...................................................................................................................................................................................................................... 22 0 19 0.16 3 2 1 0 0 0 0 0 0
...................................................................TCAAGGCAACCACGGTCCACGAC............................................................................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................................GAGACACCACTCCCCGACCCCGC........................................................ 23 0 7 0.14 1 1 0 0 0 0 0 0 0
...........................TGGCACGGAGGGGCATCCTAGGGG.................................................................................................................................................................................................................... 24 0 19 0.11 2 2 0 0 0 0 0 0 0
...........................TGGCACGGAGGGGCATCCTAGGG..................................................................................................................................................................................................................... 23 0 19 0.11 2 1 0 0 0 1 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................ 25 0 20 0.10 2 0 0 2 0 0 0 0 0
........................................CATCCTAGGGGTGCGTCGCC........................................................................................................................................................................................................... 20 0 20 0.10 2 0 0 2 0 0 0 0 0
...................................................................TCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0
................................CGGAGGGGCATCCTAGGGG.................................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACT............................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGACCACGACC............................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACCACC......................................................................................................................................................................... 28 1 20 0.10 2 1 0 1 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCAC................................................................................................................................................................................ 21 0 20 0.10 2 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................TCCCCGACCCCGCAAGCAGAACC.............................................. 23 0 15 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................ACCACTCATCGACCACGCAAGCAGAACC.............................................. 28 3 17 0.06 1 1 0 0 0 0 0 0 0
...........................TGGCACGGAGGGGCATCCTAGGGT.................................................................................................................................................................................................................... 24 1 19 0.05 1 1 0 0 0 0 0 0 0
...........................TGGCACGGAGGGGCATCCTAG....................................................................................................................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0
.....................GGAGGATGGCACGGAGGGGC.............................................................................................................................................................................................................................. 20 1 19 0.05 1 1 0 0 0 0 0 0 0
.....................................................................AAGGCAACCACGGTCCACGACCAGC......................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................TCGCCGCCCAGCTCAAGGC............................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAAGCAGAACCGGGCAACACCACGC................................ 25 0 20 0.05 1 0 0 1 0 0 0 0 0
................................................................AGCTCAAGGCAACCACGGTCC.................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................CATCCTAGGGGTGCGTCGCCGCCCAGC.................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CGCAAGGCAACCACGGTCCAC................................................................................................................................................................................ 21 1 20 0.05 1 0 0 1 0 0 0 0 0
...................................................TGCGTCGCCGCCCAGCTCAAGGCAAAAA........................................................................................................................................................................................ 28 2 20 0.05 1 1 0 0 0 0 0 0 0
.............................GCACGGAGGGGCATCCTAGGGG.................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACCAA.......................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................CAAGGCAACCACGGTCCACGACCAGCC........................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACAA.............................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGACCACG............................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................GAACCGGGCAACACCACGC............................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCA................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................CAAGGCAACCACGGTCCACG............................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................CGCAAGCAGAACCGGGCAACACCACGC............................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................................TCCAAGGGGTGCGTCGCCGCCCAG..................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTAG.................................................................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCTCAAGGCAACCACGGTCCACGA.............................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................AACAAAAAAGAGACACCAC..................................................................... 19 2 20 0.05 1 0 0 1 0 0 0 0 0
.........................................ATCCTAGGGGTGCGTCGC............................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................TAGGGGTGCGTCGCCGCCCAGCTCA................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................TCAAGGCAACCACGGACCACGA.............................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGACAA........................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCGAGGCAACCACGGTCCACGA.............................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................GCTCAAGGCAACCACGGTCCACGACCAG.......................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAACCACGGTCCACGG.............................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................CGCCCAGCTCAAGGCAACCA........................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GACCCCGCAAGCAGAACCG............................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 1
........................................................CGCCGCCCAGCTCAAGGCAAC.......................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................CAGAACCGGGCAACACCACGC............................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................CAGCTCAAGGCAACCACGGTC................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................GCTCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................GCAGAACCGGGCAACACCACGC............................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................ATCCAAGGGGTGCGTCGCC........................................................................................................................................................................................................... 19 1 20 0.05 1 0 0 1 0 0 0 0 0
...................................................................TCAAGGCAACCACGGTCCACGACCAG.......................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................AGAGGATGGCACGGAGGG................................................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................CAAGCAGAACCGGGCAACACCACGC............................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0
....................................................................CAAGGCAACCACGGTCCACGACCACC......................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CCCCGCAAGCAGAACCGGGCAACACC.................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................TCAAGGCAACCACGGTCCACGACCAGA......................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................AACAAAAAAGAGACACCAC.................................................................................................................................................... 19 2 20 0.05 1 0 0 1 0 0 0 0 0
.................................................................GCTCAAGGCAACCACGGTCCACG............................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................CAGCTCAAGGCAACCACGGTCCC................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CGCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................ 25 1 20 0.05 1 0 0 1 0 0 0 0 0
...............................................................CAGCTCAAGGCAACCACGGTCCACGACCA........................................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................ATCCCAGCTCAAGGCAACCACGGTCCA................................................................................................................................................................................. 27 2 20 0.05 1 0 0 1 0 0 0 0 0
........................................CTTCCTAGGGGTGCGTCGCC........................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 1 0 0 0 0 0
...........CGTCACGAGGAGCTAATGG......................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
.............................................TAGGGGTGCGTCGCCGCCCAGCTCAAG............................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CGCAAGCAGAACCGGGCAACACCACGC................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................CGACCCCGCAAGCAGAACCGGGCA......................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................GCTCAAGGCAACCACGGTCC.................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................TCGCCGCCCAGCTCAAGGCAACC......................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................CTCAAGGCAGCCACGGTCCACGACCAGCC........................................................................................................................................................................ 29 1 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAGCAGAACCGGGCAACACCACG................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................CAAGGCAACCACGGTCCACGACCAT.......................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................GCACGGAGGGGCATCCTAGGG..................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0 0 0
..................................................................CTCAAGGCAACCACGGACCACGACCAG.......................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

TGTGGAGCCCGGCAGTGCTCCTCTCCTACCGTGCCTCCCCGTAGGATCCCCACGCAGCGGCGGGTCGAGTTCCGTTGGTGCCAGGTGCTGGTCGGTTTGTGTTTGCTCTGTGGTGAGGGGCTAGGGCGTTCGTCTTGGCCCGTTGTGGTGCGTCATGCGTCCGGTGCTGGTCGGTTTGTGTTTGCTCTGTGGTGAGGGGCTGGGGCGTTCGTCTTGGCCCGTTGTGGTGCGTCATACTGGGTCGTTGACCTCGCTATGGCTCT
******************************************************************************************************************************************.....(((......((((...)))).)))..............................****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 GSM343916
embryo
 M059
embryo
 M062
head
 SRR902011
testis
 GSM444067
head
.......................................................AGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 0 20 37.90 758 741 8 7 0 1 0 0 1
.....................................................GCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 0 20 20.10 402 398 2 0 1 0 0 1 0
..................................................CACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 26 0 20 13.85 277 259 2 13 0 3 0 0 0
...................................................ACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 25 0 20 7.70 154 144 2 3 3 0 2 0 0
......................................................................................................................................................................................................................TGGCCCGTTGTGGTGCGTCATACT......................... 24 0 1 7.00 7 7 0 0 0 0 0 0 0
........................................................GCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 20 0 20 6.80 136 132 0 1 3 0 0 0 0
....................................................CGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 24 0 20 6.70 134 126 2 4 0 0 2 0 0
......................................................................................................................................................................................................................TGGCCCGTTGTGGTGCGTCATACTG........................ 25 0 1 6.00 6 6 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGCCCGTTGTGGTGCGTCATACT......................... 23 0 1 6.00 6 6 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCCCGTTGTGGTGCGTCATACT......................... 22 0 1 4.00 4 1 3 0 0 0 0 0 0
........................................................................................................................................................................................................................................CATACTGGGTCGTTGACCTCGCTAT...... 25 0 1 4.00 4 2 0 2 0 0 0 0 0
.........................................................................................................................................................................GTCGGTTTGTGTTTGCTCTGTGGT...................................................................... 24 0 2 3.50 7 6 1 0 0 0 0 0 0
..........................................................................................GTCGGTTTGTGTTTGCTCTGTGGT..................................................................................................................................................... 24 0 2 3.50 7 6 1 0 0 0 0 0 0
....................................................................................................................................................................................................................CTTGGCCCGTTGTGGTGCGTCATACT......................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCCGTTGTGGTGCGTCATACTG........................ 22 0 1 3.00 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCCCGTTGTGGTGCGTCATACTG........................ 23 0 1 3.00 3 3 0 0 0 0 0 0 0
.........................................................CGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 19 0 20 2.95 59 59 0 0 0 0 0 0 0
................................................CCCACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 28 0 20 2.85 57 51 2 2 0 0 2 0 0
...........................................................................................TCGGTTTGTGTTTGCTCTGTGGT..................................................................................................................................................... 23 0 2 2.50 5 3 2 0 0 0 0 0 0
..........................................................................................................................................................................TCGGTTTGTGTTTGCTCTGTGGT...................................................................... 23 0 2 2.50 5 3 2 0 0 0 0 0 0
.......................................................................................................................................TGGCCCGTTGTGGTGCGTCATGCGT....................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................CTTGGCCCGTTGTGGTGCGTCATGCG........................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGCCCGTTGTGGTGCGTCATACTG........................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0
........................................................................................................................................GGCCCGTTGTGGTGCGTCATGCGT....................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................GCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 22 0 20 1.90 38 38 0 0 0 0 0 0 0
.......................................................TGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 1 20 1.90 38 36 0 0 0 1 0 0 1
.......................................................AGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 20 0 20 1.85 37 37 0 0 0 0 0 0 0
..................................................CACGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 26 1 20 1.75 35 35 0 0 0 0 0 0 0
........................................................................................................................................................................GGTCGGTTTGTGTTTGCTCTGT......................................................................... 22 0 3 1.67 5 3 0 1 1 0 0 0 0
.........................................................................................GGTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 22 0 3 1.67 5 3 0 1 1 0 0 0 0
.......................................................AGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 1 20 1.60 32 31 1 0 0 0 0 0 0
........................................................................................................................................................................GGTCGGTTTGTGTTTGCTCTGTGGTG..................................................................... 26 0 2 1.50 3 2 0 1 0 0 0 0 0
.........................................................................................GGTCGGTTTGTGTTTGCTCTGTGGTG.................................................................................................................................................... 26 0 2 1.50 3 2 0 1 0 0 0 0 0
....................................................TGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 24 1 20 1.40 28 22 0 3 0 2 0 0 1
.............................................................................................GGTTTGTGTTTGCTCTGTGGT..................................................................................................................................................... 21 0 3 1.33 4 3 1 0 0 0 0 0 0
........................................................................................TGGTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 23 0 3 1.33 4 4 0 0 0 0 0 0 0
.......................................................................................CTGGTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 24 0 3 1.33 4 3 0 1 0 0 0 0 0
............................................................................................................................................................................GGTTTGTGTTTGCTCTGTGGT...................................................................... 21 0 3 1.33 4 3 1 0 0 0 0 0 0
......................................................................................................................................................................CTGGTCGGTTTGTGTTTGCTCTGT......................................................................... 24 0 3 1.33 4 3 0 1 0 0 0 0 0
.......................................................................................................................................................................TGGTCGGTTTGTGTTTGCTCTGT......................................................................... 23 0 3 1.33 4 4 0 0 0 0 0 0 0
.................................................CCACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 26 0 20 1.20 24 24 0 0 0 0 0 0 0
.....................................................GCAGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 23 1 20 1.20 24 24 0 0 0 0 0 0 0
..................................................CACGCAGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 26 1 20 1.15 23 22 1 0 0 0 0 0 0
..................................................AACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 26 1 20 1.05 21 16 0 4 0 0 0 1 0
......................................................................................................................................TTGGCCCGTTGTGGTGCGTCATGCGT....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
....................CTCTCCTACCGTGCCTCCCCGTAGGAT........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................TGCCCGTTGTGGTGCGTCATGCGT....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GGTCGGTTTGTGTTTGCTCTGTGGT...................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................GCTGGTCGGTTTGTGTTTGCTCTGT......................................................................... 25 0 3 1.00 3 2 1 0 0 0 0 0 0
.......CCCGGCAGTGCTCCTCTCCTACCGT....................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
....................CTCTCCTACCGTGCCTCCCCGT............................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................GTGGTGAGGGGCTAGGGCG....................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTCGGTTTGTGTTTGCTCTGTGGTG..................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................GGGCTAGGGCGTTCGTCTT............................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................TGGCCCGTTGTGGTGCGTCATGCG........................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................GCTGGTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 25 0 3 1.00 3 2 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................GGTGCGTCATACTGGGTCGTTGACCT............ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................GGTCGGTTTGTGTTTGCTCTG......................................................................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0
....GAGCCCGGCAGTGCTCCTCTCCTACCG........................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................CATGCGTCCGGTGCTGGTCGGTTTGTGT.................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................TGGGCTAGGGCGTTCGTCT................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTCATACTGGGTCGTTGACCTCGC......... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................ATCGGTGCTGGTCGGTTTGTGT.................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................GCCCGTTGTGGTGCGTCATGCG........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................GGCCCGTTGTGGTGCGTCATGCG........................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GGTCGGTTTGTGTTTGCTCTG.......................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0
.................................................................................................................................................................CGGTGCTGGTCGGTTTGTGT.................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................GGTCGGTTTGTGTTTGCTCTGTGGT..................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GTTGTGGTGCGTCATACTG........................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GTTGTGGTGCGTCATACTGGGTCGT.................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTGGCCCGTTGTGGTGCGTCATACT......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................GTCGTTGACCTCGCTATGGCTCT 23 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................GTCGGTTTGTGTTTGCTCTGTGGTG.................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................................................GGTGGAGAGGGGCTAGGGCG....................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................CATACTGGGTCGTTGACCTCGCT........ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................CCACGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 1 20 0.95 19 19 0 0 0 0 0 0 0
..................................................CACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 25 0 20 0.95 19 19 0 0 0 0 0 0 0
..................................................................................................................................CGTCTTGGCCCGTTGTGGTGCGT.............................................................................................................. 23 0 11 0.91 10 10 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGTCTTGGCCCGTTGTGGTGCGT............................... 23 0 11 0.91 10 10 0 0 0 0 0 0 0
......................................................CAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 21 0 20 0.90 18 18 0 0 0 0 0 0 0
.....................................................AAAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 2 20 0.85 17 17 0 0 0 0 0 0 0
.......................................................AGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 21 1 20 0.80 16 16 0 0 0 0 0 0 0
...................................................ACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 24 0 20 0.80 16 16 0 0 0 0 0 0 0
..........................................................GGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 18 0 20 0.75 15 15 0 0 0 0 0 0 0
.....................................................TCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 1 20 0.75 15 15 0 0 0 0 0 0 0
......................................................CAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 0 20 0.75 15 0 2 4 0 4 2 3 0
....................................................CGCAGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 24 1 20 0.70 14 14 0 0 0 0 0 0 0
......................................................CAGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 22 1 20 0.70 14 14 0 0 0 0 0 0 0
.........................................................................................................................................................................GTCGGTTTGTGTTTGCTCTGT......................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................TCGGTTTGTGTTTGCTCTGT......................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
..........................................................................................GTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 21 0 3 0.67 2 2 0 0 0 0 0 0 0
......................................................................................GCTGGTCGGTTTGTGTTTGCTCTGTG....................................................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................GCTGGTCGGTTTGTGTTTGCTCT........................................................................... 23 0 3 0.67 2 1 0 1 0 0 0 0 0
..........................................................................................GTCGGTTTGTGTTTGCTCTGTGG...................................................................................................................................................... 23 0 3 0.67 2 2 0 0 0 0 0 0 0
......................................................................................GCTGGTCGGTTTGTGTTTGCTCT.......................................................................................................................................................... 23 0 3 0.67 2 1 0 1 0 0 0 0 0
.....................................................................................................................................................................GCTGGTCGGTTTGTGTTTGCTCTGTG........................................................................ 26 0 3 0.67 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................GTCGGTTTGTGTTTGCTCTGTGG....................................................................... 23 0 3 0.67 2 2 0 0 0 0 0 0 0
...........................................................................................TCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 20 0 3 0.67 2 2 0 0 0 0 0 0 0
.................................................CCACGCAGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 27 1 20 0.65 13 13 0 0 0 0 0 0 0
....................................................CGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 24 1 20 0.65 13 13 0 0 0 0 0 0 0
....................................................CGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 23 0 20 0.65 13 13 0 0 0 0 0 0 0
.................................................AAACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 2 20 0.60 12 12 0 0 0 0 0 0 0
.......................................................CGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 1 20 0.55 11 9 0 0 1 1 0 0 0
......................................................CAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 1 20 0.55 11 11 0 0 0 0 0 0 0
.....................................................ACAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 1 20 0.55 11 9 0 0 0 2 0 0 0
.................................................TCACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 1 20 0.55 11 10 0 0 0 1 0 0 0
..........................................................................................TTCGGTTTGTGTTTGCTCTGTGGT..................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................TGTGTTTGCTCTGTGGTGAGGGGC............................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGTTTGTGTTTGCTCTGTGGTG..................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................ACGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 25 1 20 0.50 10 10 0 0 0 0 0 0 0
.................................................................................................TGTGTTTGCTCTGTGGTGAGGGGC.............................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................GGTCGGTTTGTGCTTGCTCTGTGGT..................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................TTGTGTTTGCTCTGTGGTGAGGGGC.............................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GGTCGGTTTGTGCTTGCTCTGTGGT...................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TTGTGTTTGCTCTGTGGTGAGGGGC............................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................TTCGGTTTGTGTTTGCTCTGTGGT...................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................GCCAGGTGCTGGTCGGTTTGTGTTTGCT............................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................CGGTTTGTGTTTGCTCTGTGGTG.................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................AAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 1 20 0.45 9 8 0 0 0 1 0 0 0
..............................................................GGTCGAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 24 0 20 0.45 9 8 0 1 0 0 0 0 0
........................................................GTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 20 1 20 0.45 9 9 0 0 0 0 0 0 0
...................................................ACGCAGCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 25 1 20 0.45 9 9 0 0 0 0 0 0 0
.................................................................................................................................TCGTCTTGGCCCGTTGTGGTGCGT.............................................................................................................. 24 0 11 0.36 4 4 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCGTCTTGGCCCGTTGTGGTGCGT............................... 24 0 11 0.36 4 4 0 0 0 0 0 0 0
................................................CCCACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 27 0 20 0.35 7 7 0 0 0 0 0 0 0
.........................................................................................GGTCGGTTTGTGTTTGCTCTGTGG...................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGTTTGTGTTTGCTCTGTGG....................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................CTGGTCGGTTTGTGTTTGCTCTGTG........................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................GGTGCTGGTCGGTTTGTGTTTGCTCT........................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................TGGTCGGTTTGTGTTTGCTCTGTGG...................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TCGGTTTGTGTTTGCTCTGTG........................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TGTTTGCTCTGTGGTGAGGGGCT.............................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................CTGGTCGGTTTGTGTTTGCTCTG.......................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................GGTGCTGGTCGGTTTGTGTTTGCTCT.......................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTCGGTTTGTGTTTGCTCTGTG........................................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................GGGTCGGTTTGTGTTTGCTCTGT......................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TTTGTGTTTGCTCTGTGGT...................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................CTGGTCGGTTTGTGTTTGCTCTGTG....................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTTGCTCTGTGGTGAGGGGCT.............................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGGTCGGTTTGTGTTTGCTCTGTGG....................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................TCTGGTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 25 1 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................TTTTGCTCTGTGGTGAGGGGCT............................................................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................TTTGTGTTTGCTCTGTGGT..................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................CTGGTCGGTTTGTGTTTGCTCTG......................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGTTTGTGTTTGCTCTGTG........................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................GTGCTGGTCGGTTTGTGTTTGC............................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................CTGGTCGGTTTGTGTTTGCTCT.......................................................................................................................................................... 22 0 3 0.33 1 0 0 0 1 0 0 0 0
........................................................................................GGGTCGGTTTGTGTTTGCTCTGT........................................................................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGGTCGGTTTGTGTTTGCTCTGT......................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GGTCGGTTTGTGTTTGCTCTGTGG....................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................GTCGGTTTGTGTTTGCTCTGTG....................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GTGCTGGTCGGTTTGTGTTTGC.............................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................CGGTTTGTGTTTGCTCTGTGG...................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................TCGGTTTGTGTTTGCTCTGTG....................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................CTGGTCGGTTTGTGTTTGCTCT........................................................................... 22 0 3 0.33 1 0 0 0 1 0 0 0 0
...................................................................................................TGTTTGCTCTGTGGTGAGGGGCT............................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................CGGTTTGTGTTTGCTCTGTG....................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................GCGGCGGGTTGAGTTCCGTT........................................................................................................................................................................................... 20 1 20 0.30 6 6 0 0 0 0 0 0 0
...................................................AAAAAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 25 3 20 0.30 6 5 0 0 0 1 0 0 0
.................................................ACACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 1 20 0.30 6 6 0 0 0 0 0 0 0
...............................................................GTCGAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 23 0 20 0.30 6 5 0 0 0 1 0 0 0
.............................................................GGGTCGAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 25 0 20 0.30 6 5 0 1 0 0 0 0 0
............................................................................GGTGCCAGGTGCTGGTCGGTTTGTGT................................................................................................................................................................. 26 0 7 0.29 2 2 0 0 0 0 0 0 0
.................................................................................CAGGTGCTGGCCCGGTTGTG.................................................................................................................................................................. 20 3 18 0.28 5 5 0 0 0 0 0 0 0
...................................................................................................................................GTCTTGGCCCGTTGTGGTGCGT.............................................................................................................. 22 0 11 0.27 3 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTCTTGGCCCGTTGTGGTGCGT............................... 22 0 11 0.27 3 3 0 0 0 0 0 0 0
.............................................................................................GGTTTGTGTTTGCTCTGT........................................................................................................................................................ 18 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................AACGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 1 20 0.25 5 5 0 0 0 0 0 0 0
..........................................................................................................GCGGTGGAGAGGGGCTAGGGC........................................................................................................................................ 21 3 4 0.25 1 0 1 0 0 0 0 0 0
...............................................CCCCACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 29 0 20 0.25 5 5 0 0 0 0 0 0 0
......................................................TAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 1 20 0.25 5 5 0 0 0 0 0 0 0
............................................................................................................................................................................GGTTTGTGTTTGCTCTGT......................................................................... 18 0 4 0.25 1 1 0 0 0 0 0 0 0
......................CTCCTACCGTGCCTCCCCGTAGGAT........................................................................................................................................................................................................................ 25 0 19 0.21 4 4 0 0 0 0 0 0 0
....................................................AGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 24 1 20 0.20 4 4 0 0 0 0 0 0 0
............................................................CGGGTCGAGTTCCGTTGGTGCCA.................................................................................................................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0 0 0
........................................GTAGGATCCCCACGCAGCGGCGGGT...................................................................................................................................................................................................... 25 0 20 0.20 4 2 0 0 2 0 0 0 0
.................................................................CGAGTTCCGTTGGTGCCAGGTGCT.............................................................................................................................................................................. 24 0 20 0.20 4 4 0 0 0 0 0 0 0
............................................................CGGGTCGAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 26 0 20 0.20 4 3 0 1 0 0 0 0 0
......................................................TTGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 2 20 0.20 4 4 0 0 0 0 0 0 0
..........................................................................................................................ATGGCATTCGTCTTGGCCCGT........................................................................................................................ 21 2 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CATACGGGGTCGTTGACCTCGCTAT...... 25 1 5 0.20 1 0 0 1 0 0 0 0 0
.................................................AAACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 26 2 20 0.20 4 4 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTCTTGGCTCGTTGTGGTGCGT............................... 22 1 11 0.18 2 1 0 0 1 0 0 0 0
...................................................................................................................................GTCTTGGCTCGTTGTGGTGCGT.............................................................................................................. 22 1 11 0.18 2 1 0 0 1 0 0 0 0
.................................................CCACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 0 20 0.15 3 0 0 0 1 1 0 0 1
............................................................................GGTGCCAGGTGCTGGTCGGTT...................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0
........................................................ACGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 20 1 20 0.15 3 3 0 0 0 0 0 0 0
..................................................................GAGTTCCGTTGGTGCCAGGTGC............................................................................................................................................................................... 22 0 20 0.15 3 0 0 3 0 0 0 0 0
............................................GATCCCCACGCAGCGGCGGGTCGAGT................................................................................................................................................................................................. 26 0 20 0.15 3 3 0 0 0 0 0 0 0
.......................................................AGCGGCGGGTCGAGTTCCGTTC.......................................................................................................................................................................................... 22 1 20 0.15 3 1 0 2 0 0 0 0 0
..............................................................GGTCGAGTTCCGTTGGTGCCAGG.................................................................................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0 0 0 0
.......................................................AGCGGCGGGTCGAGTTCCG............................................................................................................................................................................................. 19 0 20 0.15 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTTCGTCTTGGCCCGTTGTGGT................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0
.................................................CCACGCAGTGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 26 1 20 0.15 3 3 0 0 0 0 0 0 0
.........................................................TGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 19 1 20 0.15 3 3 0 0 0 0 0 0 0
...............................................................................................................................GTTCGTCTTGGCCCGTTGTGGT.................................................................................................................. 22 0 20 0.15 3 3 0 0 0 0 0 0 0
.....................................................................TTCCGTTGGTGCCAGGTGCTGGT........................................................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0
.................................................CCACGCAGCGGCGGGTCGAGTTA............................................................................................................................................................................................... 23 1 20 0.15 3 0 0 3 0 0 0 0 0
..................................................CACGCAGCGGCGGGTCGAGTTCCGTTC.......................................................................................................................................................................................... 27 1 20 0.15 3 3 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGTCTTGGCCCGTTGTGGTGCGTCAT............................ 26 0 7 0.14 1 1 0 0 0 0 0 0 0
..................................................................................................................................CGTCTTGGCCCGTTGTGGTGCGTCAT........................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGCCCGTTGTGGTGCGTCAT............................ 20 0 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCCCGTTGTGGTGCGTCAT............................ 19 0 7 0.14 1 1 0 0 0 0 0 0 0
.........................................................................................................................................GCCCGTTGTGGTGCGTCAT........................................................................................................... 19 0 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................GGTGCCAGGTGCTGGTCGGTTTGT................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................................................................................GGCCCGTTGTGGTGCGTCAT........................................................................................................... 20 0 7 0.14 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................AAAGTCGGTTTGTGTTTGCTCT........................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0
.......................................................................................AAAGTCGGTTTGTGTTTGCTCT.......................................................................................................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0
................................................................................................................GTGGTGGGCTAGGGCATTC.................................................................................................................................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0
.........................................................AGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 19 1 20 0.10 2 2 0 0 0 0 0 0 0
..............................................................................TGCCAGGTGCTGGTCGGTTTGTGT................................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGTTCGTCTTGGCCCGTTGTGGT................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................................................AGCGGCGGGTCGAGTTCC.............................................................................................................................................................................................. 18 0 20 0.10 2 2 0 0 0 0 0 0 0
....................................................TGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 23 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................CACGCAGTGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................GCAGCGGCGGGTTGAGTTCCG............................................................................................................................................................................................. 21 1 20 0.10 2 2 0 0 0 0 0 0 0
...................................................AAATAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 25 3 20 0.10 2 2 0 0 0 0 0 0 0
.................................................ATACGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 2 20 0.10 2 2 0 0 0 0 0 0 0
.............................................................................GTGCCAGGTGCTGGTCGGTTTGTGT................................................................................................................................................................. 25 0 10 0.10 1 0 0 1 0 0 0 0 0
..................................................AACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0
...........................................................................................................................GGGCGTTCGTCTTGGCCCGTTGT..................................................................................................................... 23 0 20 0.10 2 1 0 1 0 0 0 0 0
...................................................ACGCAGTGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 24 1 20 0.10 2 2 0 0 0 0 0 0 0
...............................................................GTCGAGTTCCGTTGGTGCCAGGTG................................................................................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................................AAAAGGATCCCCACGCAGCGGCGGGT...................................................................................................................................................................................................... 26 3 20 0.10 2 2 0 0 0 0 0 0 0
...................................................AAACAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 25 2 20 0.10 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................................GCGTTCGTCTTGGCCCGTTGT...................................... 21 0 20 0.10 2 1 0 1 0 0 0 0 0
.........................................................................GTTGGTGCCAGGTGCTGGTCGGT....................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0
.................................................TTACGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 3 20 0.10 2 2 0 0 0 0 0 0 0
................................................CCCACGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 28 1 20 0.10 2 2 0 0 0 0 0 0 0
.................................................ACACGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 26 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................CACGCAGCGGCGGGTTGAGTTCCGT............................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................CACGCAGCGGCGGGTCGAGTTCCG............................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................TTAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 2 20 0.10 2 2 0 0 0 0 0 0 0
....................................................TGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 24 2 20 0.10 2 2 0 0 0 0 0 0 0
.......................................................AGTGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 20 1 20 0.10 2 2 0 0 0 0 0 0 0
......................................................CAGCGGCGGGTCGAGTTCCGTTT.......................................................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0 0 0
........................................AAAGGATCCCCACGCAGCGGCGGGT...................................................................................................................................................................................................... 25 2 20 0.10 2 2 0 0 0 0 0 0 0
.................................................CCACGCAGCGGCGGGTCGAGT................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0
....................................................AACAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 24 2 20 0.10 2 2 0 0 0 0 0 0 0
............................................................................................................................TGCGTTCGTCTTGGCCCGTTGT..................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................CCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0 0 0
............................................................................GGTGCCAGGTGCTGGTCGG........................................................................................................................................................................ 19 0 20 0.10 2 2 0 0 0 0 0 0 0
..............................................................................................................................CGTTCGTCTTGGCCCGTTGTGGT.................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0
......................................................CAGCGGCGGGTCGAGTTCCGTTC.......................................................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0 0 0
.............................................................................GTGCCAGGTGCTGGTCGGTTT..................................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0
.................................................TCACGCAGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 2 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................CGAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................GAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GGGCGTTCGTCTTGGCCCGTTGT...................................... 23 0 20 0.10 2 1 0 1 0 0 0 0 0
...........................................GGATCCCCACGCAGCGGCGGGTCGAGT................................................................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCTTGGCCCGTTGTGGTGCGT............................... 21 0 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTCTTGGCCCGTGGTGGTGCGT............................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................AAGGTGCTGGTCGGTTTGTG.................................................................................................................................................................. 20 1 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................GTCTTGGCCCGTGGTGGTGCGT.............................................................................................................. 22 1 11 0.09 1 1 0 0 0 0 0 0 0
....................................................................................................................................TCTTGGCCCGTTGTGGTGCGT.............................................................................................................. 21 0 11 0.09 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGCCCGTTGTGGTGCGTC.............................. 18 0 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................GGCCCGTTGTGGTGCGTC............................................................................................................. 18 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................TGAGGGGCTGGGGCGTTCGT................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGTGGTGAGTAGCTGGTGCGT....................................................... 21 3 14 0.07 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................TCTGTGGTGAGTAGCTGGTGCGT....................................................... 23 3 14 0.07 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................GGGGCTGGGGCGTTCGTCT................................................. 19 0 15 0.07 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................GGGCTGGGGCGTTCGTCTT................................................ 19 0 16 0.06 1 1 0 0 0 0 0 0 0
..........................TACCGTGCCTCCCCGTAGGAT........................................................................................................................................................................................................................ 21 0 19 0.05 1 1 0 0 0 0 0 0 0
.....................TCTCCTACCGTGCCTCCCCGTAGGAT........................................................................................................................................................................................................................ 26 0 19 0.05 1 1 0 0 0 0 0 0 0
......................CTCCTACCGTGCCTCCCCGTAGGA......................................................................................................................................................................................................................... 24 0 19 0.05 1 1 0 0 0 0 0 0 0
.......................TCTTACCGTGCCTCCCCGTAGGAT........................................................................................................................................................................................................................ 24 1 19 0.05 1 1 0 0 0 0 0 0 0
.......................................................AGCGGCGGGTCGAGCTCCGTT........................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................GCGGGTTGAGTTCCGTTGGTGC...................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................CCCACGCAGCGGCGGGTCGAGTTC............................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................AAGTTCCGTTGGTGCCAGGT................................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................AAAGCGGCGGGTCGAGTTCC.............................................................................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................ATCGAGTTCCGTTGGTGCCAGGTC................................................................................................................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................CCGTTGGTGCCAGGTGCTG............................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................GCAGTGGCGGGTCGAGTTCCGTTA.......................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................GTCGAGTTCCGTTGGTGCCAGG.................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAGCGTTCGTCTTGGCCCGTTGT...................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................TCCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................TGTGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................TCGTCTTGGCCCGTTGTGGTGCG............................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................TTTGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 23 3 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................CTGGTCGGTCTGTGGTTGA............................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0
........................................................TCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................CGTGCCTCCCCGTAGGATCCC..................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................CACGCAGCGGCGGGTCGAGTTCCGTC........................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................GGGCGTTCGTCTTGGCCCGTTGTG.................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................AAACGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCGTTCGTCTTGGCCCGTTGTGGT................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................TAGGATCCCCACGCAGCGGCGGGT...................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................GGTCGAGTTCCGTTGGTGCCTGGT................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGTCTTGGCCCGTTGTGGTGCG................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................CGCGGCGGGTCGAGTTCCGTTT.......................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0
......................................................ATGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 2 20 0.05 1 0 0 1 0 0 0 0 0
.......................................................AGCGGCGGGTCGAGTTCCGTTTGAAC...................................................................................................................................................................................... 26 3 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................CGGCGGGTCGAGTTCCGTTGGT........................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................GTGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................GGCGGGTCGAGTTCCGTTGGTGCCAG................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................CGCGCAGCGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0
......................................................CAGCGGCGGGTAGAGTTCCGTT........................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 1 0 0 0
............................................................................................................................GGCGTTCGTCTTGGCCCGTTGTGGT.................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................CCGCGCAGCGGCGGGTCGAGTTCCGTT........................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................GCAGTGGCGGGTCGAGTTCCGT............................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_129:24943-25205 - dps_1779 ACACCTCGGGCCGTCACGAGGAG---AGGATGGCACGGAGG-----GGCATC------------------------CTAGGGGTGCGTCGCCGCCC---AGCTCAAGGCAACCACGGTCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGATCCCGCAAGCAGAACCGGGCAACACCACGCAGTACGCAGGCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGGGCAACACCACGCAGTATGACCCAGCAACTGGAGCGATACCGAGA
droPer2 scaffold_479:9982-10244 + ACACCTCGGGCCGTCACGAGGAG---AGGATGGCACGGAGG-----GGCATC------------------------CTAGGGGTGCGTCGCCGCCC---AGCTCAAGGCAACCACGGTCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGCGCAACACCACGCAGTACGCAGGCCACGACCAGCCAAATACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGGGCAACACCACGCAGTATGGCCCAGCAACTGGAGCGATACTGAGA
droWil2 scf2_1100000006605:1127-1213 - CCCA-----------------------------------------------------------------------------------------------------AGACTACTAGGGTTCAGGAAAAACCAAACAATAAAGGGAAACCACCACAAAATCCTGT-----------------------------------------------GGCTCAGGCAAGCAACCAGTCCACA---------------------------------------------------------------
droVir3 scaffold_13045:1165800-1165876 + ACATCAAGGT--GTCAGAAAA-----ACGGTGGCGAGGTTAGCC--------CAGCGGTACTACTGGCCGGGTATG---------TTCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACTCAAG
droMoj3 scaffold_6500:31717262-31717323 - CGGGACGGAG--TGGAGGAAG-----GGCACAGTGAT----------GTGTC------------------------AGGAAGTTTCGGCGAAG------AGTTCGAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_9161:4995-5026 + TCATACGGGC--AGCAGGAAA-----ACAATAGCCCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13258:329839-329908 - ACATCTAGGC--GGAAGGAGCCGTGGGCGACGGTATGGGGGACT--------TCGTGGGATCGTTGCCAAGGTCC------------------------------AAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395243:1139-1174 - ACACCTAGGC--ATGAGGAAG-----ACGATAGCCAGAGTGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000300984:6058-6100 + ACACCTCGGA--ATCAGGAAG-----ACAACCGCCCGGATCGCC--------CAGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453618:30396-30462 + ACATCTTGGC--GTTAGGAAG-----ACAATTATCAGGATCTCA--------CAGAAGTACTACTGGCCAGGGATG---------TTTCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491110:34468-34537 + ACACATGGGC--AGCCGGAAG-----ACGATCGCGAGGGTGGCA--------GCGAGGTATTATTGGCCGGGCATG---------CACCGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droRho1 scf7180000780144:1291-1357 - ACATCTTGGC--GTTAGAAAG-----ACCATCATCAGAATCTCG--------GAGAAGTACCACTGGCCAGGGATG---------TTTCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000297089:8077-8161 - ACATCTCGGA--ATCAGGAAG-----ACAATATTGGC------AGGTAAGTCCGCAA-------------------------GTGTGACACTTGCCAACGGTTCAAAGT----------------CAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCAAAC
droTak1 scf7180000415839:2047-2083 + ACACCTGGGC--AGTCGGAAA-----ACGATTGCAAGAGTGGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409911:2695-2740 - ACACCTGGGC--GTGCGGAAG-----ACGAACACACGAGTAGCC--------CGGAGGTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3LHet:1179006-1179037 + ACACTTGGGA--AGTCGCAAG-----ACGATTGCAAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 node_110930:16774-16782 - ACACCTAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_2541:2469-2534 + ACACTTGGGA--AGCCGCAAG-----ACGATTGCCAGGATTGCA--------GCCCGGTATCATTGACCAGGAATG---------CATCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2h_random_003:1592-1657 - ACACCTGGGA--AGTCGGAAG-----ACTATGGCGAGGGTGGCA--------GGCAGGTACCACTGGCCAGGAATG---------CATCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:1385957-1386027 - TCACCTAGGT--AGTCGGAAG-----ACGATTGCGAGGGTGGCA--------GCCCGGTACCACTGGCCAGGAATGCCAGAGGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ACACCTCGGGCCGTCACGAGGAG---AGGATGGCACGGAGG-----GGCATC------------------------CTAGGGGTGCGTCGCCGCCC---AGCTCAAGGCAACCACGGTCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGATCCCGCAAGCAGAACCGGGCAACACCACGCAGTACGCAGGCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGGGCAACACCACGCAGTATGACCCAGCAACTGGAGCGATACCGAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................CTCAAGGCAACCACGGTCCACGA..............................................................................................................................................................................23208.20164015921000200
.....................................................................................................CTCAAGGCAACCACGGTCCACG...............................................................................................................................................................................22204.308608210101100
.....................................................................................................CTCAAGGCAACCACGGTCCACGAC.............................................................................................................................................................................24202.705405220000000
........................................................................................................................................AAACGAGACACCACTCCCCGATCC..........................................................................................................................................2412.0020200000000
........................................................................................................................................................................................................................................................................GCAGTATGACCCAGCAACTGGA............2212.0020200000000
.......................................................................................................................................................................................................................................................................CGCAGTATGACCCAGCAACTGGAGA..........2512.0020200000000
........................................................................................................................................................................................................................................................................GCAGTATGACCCAGCAACTGGAG...........2312.0020200000000
.........................................................................................................................................................................................................................................................................CAGTATGACCCAGCAACTGGAGCGA........2511.0010100000000
...................................................................................................................................................................................................................................................................ACCACGCAGTATGACCCAGCAACTGGAG...........2811.0010100000000
....................................................................................................................................ACACAAACGAGACACCACTCCCCGATC...........................................................................................................................................2711.0010100000000
........................................................................................................................................AAACGAGACACCACTCCCCGATCCC.........................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................CGCAGTATGACCCAGCAACTGGAGCG.........2611.0010100000000
........................................................................................................................................AAACGAGACACCACTCCCCGATC...........................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................ACACAAACGAGACACCACTCCCCGA..............................................................2521.0020200000000
............................................................................................................................................GAGACACCACTCCCCGATCCC.........................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................CCACGCAGTATGACCCAGCAAC................2211.0010100000000
........................................................................................................................................................................................CGCAGTACGCAGGCCACGACCAGCC.........................................................................................2511.0010100000000
......................................................................................................................................................................CAGAACCGGGCAACACCACGCAGTAC..........................................................................................................2611.0010100000000
....................................................................................................................................................................................................................................................................CCACGCAGTATGACCCAGCAACA...............2311.0010100000000
.............TCACGAGGAG---AGGATGGCACGGAT..................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................TCCCCGATCCCGCAAGCAGAACCGGG..........................................................................................................................2611.0010100000000
.........................................................................................................................................AACGAGACACCACTCCCCGATCCC.........................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................AAACGAGACACCACTCCCCGAC.............................................................2221.0020200000000
.......................................................................................................................................................................................................................................................................CGCAGTATGACCCAGCAACTGGAGC..........2511.0010100000000
......................................................................................................................................ACAAACGAGACACCACTCCCCGATC...........................................................................................................................................2511.0010100000000
.................................................................................................................................................................................................................................................................ACACCACGCAGTATGACCCAGC...................2211.0010100000000
.............TCACGAGGAG---AGGATGGCACGGAGG-----............................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................CAGAACCGGGCAACACCACGCAGTACGC........................................................................................................2811.0010100000000
............................................................................................................................................................................................................................................................................TATGACCCAGCAACTGGAGCGATACCGA..2811.0010100000000
....................................................................................................................................ACACAAACGAGACACCACTCCCCGATCC..........................................................................................................................................2811.0010100000000
........................................................................................................................................................................................CGCAGTACGCAGGCCACGACCA............................................................................................2211.0010100000000
....................................................................................................................................ACACAAACGAGACACCACTCCCCGA.............................................................................................................................................2521.0020200000000
..............................................................................................................................................GACACCACTCCCCGATCCCGCA......................................................................................................................................2211.0010100000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACCA...........................................................................................................................................................................26201.002002000000000
.........................................................................................................................................................................................................................................................................CAGTATGACCCAGCAACTGGAGC..........2311.0010100000000
......................................................................................................................................................................................CACGCAGTACGCAGGCCACGACC.............................................................................................2311.0010100000000
..................................................................................................................................................................................ACACCACGCAGTACGCAGGCCA..................................................................................................2211.0010100000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACCAGC.........................................................................................................................................................................28200.951901720000000
..........................................................................................................................................................................................................................CGAGACACCACTCCCCGACCCC..........................................................2230.6720200000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACCAG..........................................................................................................................................................................27200.551101100000000
......................................................................................................TCAAGGCAACCACGGTCCACGA..............................................................................................................................................................................22200.501001000000000
...................................................................................................................................................................................................................ACACAAACGAGACACCACTC...................................................................2020.5010100000000
...............................................................................................................................GCCAAACACAAACGAGACACCACTCCC................................................................................................................................................2720.5010100000000
.......................................................................................................................................................................................................................AAACGAGACACCACTCCCCGACCCCG.........................................................2620.5010100000000
....................................................................................................................................ACACAAACGAGACACCACTCCC................................................................................................................................................2220.5010100000000
.......................................................................................................................................................................................................................AAACGAGACACCACTCCCCGACCCC..........................................................2520.5010100000000
.......................................................................................................................................................................................................................AAACGAGACACCACTCCCCGACC............................................................2320.5010100000000
...................................................................................................................................................................................................................ACACAAACGAGACACCACTCCC.................................................................2220.5010100000000
........................................................................................................................................................................................................................AACGAGACACCACTCCCCGACCC...........................................................2320.5010100000000
..............................................................................................................................................................................................................GCCAAACACAAACGAGACACCACTCCC.................................................................2720.5010100000000
.......................................................................................................................................................................................................................AAACGAGACACCACTCCCCGACCC...........................................................2420.5010100000000
....................................................................................................................................ACACAAACGAGACACCACTC..................................................................................................................................................2020.5010100000000
........................................................................................................................................................................................................................AACGAGACACCACTCCCCGACC............................................................2220.5010100000000
.......................................................................................................................................................................................................................AAACGAGACACCACTCCCCGA..............................................................2130.3310100000000
........................................................................................................................................AAACGAGACACCACTCCCCGA.............................................................................................................................................2130.3310100000000
.....................................................................................................CTCAAGGCAACCACGGTCC..................................................................................................................................................................................19200.3060500100000
......................................................................................................TCAAGGCAACCACGGTCCACG...............................................................................................................................................................................21200.2040400000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACCAGCC........................................................................................................................................................................29200.2040310000000
......................................................................................................TCAAGGCAACCACGGTCCACGACCA...........................................................................................................................................................................25200.2040400000000
..............................TGGCACGGAGG-----GGCATC------------------------CTAGG.........................................................................................................................................................................................................................22190.1630200000100
......................................................................................................TCAAGGCAACCACGGTCCACGAC.............................................................................................................................................................................23200.1530300000000
...........................................................................................................................................................................................................................GAGACACCACTCCCCGACCCCGC........................................................2370.1410100000000
..............................TGGCACGGAGG-----GGCATC------------------------CTAGGGG.......................................................................................................................................................................................................................24190.1120200000000
..............................TGGCACGGAGG-----GGCATC------------------------CTAGGG........................................................................................................................................................................................................................23190.1120100001000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................25200.1020020000000
................................................CATC------------------------CTAGGGGTGCGTCGCC..............................................................................................................................................................................................................20200.1020020000000
......................................................................................................TCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................24200.1020200000000
...................................CGGAGG-----GGCATC------------------------CTAGGGG.......................................................................................................................................................................................................................19200.1020200000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACT............................................................................................................................................................................25200.1020200000000
.....................................................................................................CTCAAGGCAACCACGGTCCAC................................................................................................................................................................................21200.1020000000200
.....................................................................................................................................................................................................................................TCCCCGACCCCGCAAGCAGAACC..............................................23150.0710100000000
..............................TGGCACGGAGG-----GGCATC------------------------CTAGGGT.......................................................................................................................................................................................................................24190.0510100000000
..............................TGGCACGGAGG-----GGCATC------------------------CTAG..........................................................................................................................................................................................................................21190.0510100000000
........................................................................................................AAGGCAACCACGGTCCACGACCAGC.........................................................................................................................................................................25200.0510100000000
.......................................................................................TCGCCGCCC---AGCTCAAGGC.............................................................................................................................................................................................19200.0510100000000
.................................................................................................................................................................................................................................................CAAGCAGAACCGGGCAACACCACGC................................25200.0510010000000
...................................................................................................AGCTCAAGGCAACCACGGTCC..................................................................................................................................................................................21200.0510100000000
................................................CATC------------------------CTAGGGGTGCGTCGCCGCCC---AGC....................................................................................................................................................................................................27200.0510100000000
................................GCACGGAGG-----GGCATC------------------------CTAGGGG.......................................................................................................................................................................................................................22200.0510100000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGACCAA..........................................................................................................................................................................27200.0510100000000
.......................................................................................................CAAGGCAACCACGGTCCACGACCAGCC........................................................................................................................................................................27200.0510100000000
........................................................................................................................................................................GAACCGGGCAACACCACGC...............................................................................................................19200.0510100000000
.....................................................................................................CTCAAGGCAACCACGGTCCA.................................................................................................................................................................................20200.0510100000000
.......................................................................................................CAAGGCAACCACGGTCCACG...............................................................................................................................................................................20200.0510100000000
................................................................................................................................................................CGCAAGCAGAACCGGGCAACACCACGC...............................................................................................................27200.0510100000000
.....................................................................................................CTCAAGGCAACCACGGTAG..................................................................................................................................................................................19200.0510100000000
.................................................ATC------------------------CTAGGGGTGCGTCGC...............................................................................................................................................................................................................18200.0510100000000
.............................................................................TAGGGGTGCGTCGCCGCCC---AGCTCA.................................................................................................................................................................................................25200.0510100000000
....................................................................................................GCTCAAGGCAACCACGGTCCACGACCAG..........................................................................................................................................................................28200.0510100000000
.....................................................................................................CTCAAGGCAACCACGGTCCACGG..............................................................................................................................................................................23200.0510100000000
...........................................................................................CGCCC---AGCTCAAGGCAACCA........................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................................................GACCCCGCAAGCAGAACCG.............................................19200.0510000000010
........................................................................................CGCCGCCC---AGCTCAAGGCAAC..........................................................................................................................................................................................21200.0510100000000
......................................................................................................................................................................CAGAACCGGGCAACACCACGC...............................................................................................................21200.0510100000000
...............................................................................................C---AGCTCAAGGCAACCACGGTC...................................................................................................................................................................................21200.0510100000000
....................................................................................................GCTCAAGGCAACCACGGTCCACGACC............................................................................................................................................................................26200.0510100000000
.....................................................................................................................................................................GCAGAACCGGGCAACACCACGC...............................................................................................................22200.0510100000000
......................................................................................................TCAAGGCAACCACGGTCCACGACCAG..........................................................................................................................................................................26200.0510100000000
.....................AG---AGGATGGCACGGAGG-----G...........................................................................................................................................................................................................................................................18200.0510100000000
..................................................................................................................................................................CAAGCAGAACCGGGCAACACCACGC...............................................................................................................25200.0510010000000
............................................................................................................................................................................................................................................CCCCGCAAGCAGAACCGGGCAACACC....................................26200.0510100000000
......................................................................................................TCAAGGCAACCACGGTCCACGACCAGA.........................................................................................................................................................................27200.0510100000000
....................................................................................................GCTCAAGGCAACCACGGTCCACG...............................................................................................................................................................................23200.0510100000000
...............................................................................................C---AGCTCAAGGCAACCACGGTCCC.................................................................................................................................................................................23200.0510100000000
...............................................................................................C---AGCTCAAGGCAACCACGGTCCACGACCA...........................................................................................................................................................................29200.0510100000000
.............................................................................TAGGGGTGCGTCGCCGCCC---AGCTCAAG...............................................................................................................................................................................................27200.0510100000000
...............................................................................................................................................................................................................................................CGCAAGCAGAACCGGGCAACACCACGC................................27200.0510100000000
.........................................................................................................................................................................................................................................CGACCCCGCAAGCAGAACCGGGCA.........................................24200.0510100000000
....................................................................................................GCTCAAGGCAACCACGGTCC..................................................................................................................................................................................20200.0510100000000
.......................................................................................TCGCCGCCC---AGCTCAAGGCAACC.........................................................................................................................................................................................23200.0510100000000
..................................................................................................................................................................................................................................................AAGCAGAACCGGGCAACACCACG.................................23200.0510100000000
.......................................................................................................CAAGGCAACCACGGTCCACGACCAT..........................................................................................................................................................................25200.0510100000000
................................GCACGGAGG-----GGCATC------------------------CTAGGG........................................................................................................................................................................................................................21200.0510000001000
droPer2
ACACCTCGGGCCGTCACGAGGAG---AGGATGGCACGGAGG-----GGCATC------------------------CTAGGGGTGCGTCGCCGCCC---AGCTCAAGGCAACCACGGTCCACGACCAGCCAAACACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGCGCAACACCACGCAGTACGCAGGCCACGACCAGCCAAATACAAACGAGACACCACTCCCCGACCCCGCAAGCAGAACCGGGCAACACCACGCAGTATGGCCCAGCAACTGGAGCGATACTGAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................AGCCAAATACAAACGAGACACCACTC...................................................................2620.501010000
....................................................................................................................................................................................................................................................................CCACGCAGTATGGCCCAGCAACTGGAGC..........2820.501010000
....................................................................................................................................ACACAAACGAGACACCACTCCC................................................................................................................................................2270.141010000
.................................................................................................................................................................................................................................................CAAGCAGAACCGGGCAACACCA...................................22200.102020000
.................................................................................................................................................................................................................................................CAAGCAGAACCGGGCAACACCACGC................................25200.051010000
..............................................................................................................................................................................................................................................CCGCAAGCAGAACCGGGCAACA......................................22200.051010000
..............................................................................................................................................................................................................................................CCGCAAGCAGAACCGGGCAACACCACG.................................27200.051010000
...................................................................................TGCGTCGCCGCCC---AGCTCAAGGCAACCA........................................................................................................................................................................................28200.051010000
...........................................................................................................................................................................................................................................ACCCCGCAAGCAGAACCGGGCAACACC....................................27200.051010000
...............................................................................................................................................................................................................................................CGCAAGCAGAACCGGGCAAC.......................................20200.051010000
..............................TGGCACGGAGG-----GGCATC------------------------CTAGGT........................................................................................................................................................................................................................23200.051010000
droWil2
CCCA-----------------------------------------------------------------------------------------------------AGACTACTAGGGTTCAGGAAAAACCAAACAATAAAGGGAAACCACCACAAAATCCTGT-----------------------------------------------GGCTCAGGCAAGCAACCAGTCCACA---------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ACATCAAGGT--GTCAGAAAA-----ACGGTGGCGAGGTTAGCC--------CAGCGGTACTACTGGCCGGGTATG---------TTCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACTCAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........GT--GTCAGAAAA-----ACGGTGGCGAGG....................................................................................................................................................................................................................................................................232012.0524100300630292817100000000061902823015409018420168000000000000000000000020
........GT--GTCAGAAAA-----ACGGTGGCGAG.....................................................................................................................................................................................................................................................................222011.952390011007160102200100000010002429252117166953115394200000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGA......................................................................................................................................................................................................................................................................21207.80156004084010011010000004007014221616130861163505000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTT..................................................................................................................................................................................................................................................................25207.7515500902100017346000000000182030172400401021941000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGG.........................................................................................................................................................................................................................................................................18205.75115003010324300120000000003701471815605007931100000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGC........................................................................................................................................................................................................................................................................19202.85570000100011012000000000000004704114250461200000000000000000001000
........GT--GTCAGAAAA-----ACGGTGGCGAGGT...................................................................................................................................................................................................................................................................24202.60520030002110300000000000003118020004032700000000000000000000000002
........GT--GTCAGAAAA-----ACGGTGGCG.......................................................................................................................................................................................................................................................................20202.4549000021700100020000001000065444041022012000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTA.................................................................................................................................................................................................................................................................26201.1022000000000000000000000000340012030071100000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAT.....................................................................................................................................................................................................................................................................22200.8016000010100000100000000003402020002000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGT......................................................................................................................................................................................................................................................................21200.7515000000000001010000001002021122001000100000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAA.....................................................................................................................................................................................................................................................................22200.5010000000100000100000000001023000001001000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTT.................................................................................................................................................................................................................................................................26200.306000000000000010000000000002010010010000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGC......................................................................................................................................................................................................................................................................21200.306000000100000000000000002001000000100010000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGATA....................................................................................................................................................................................................................................................................23200.204000000000000010000000000120000000000000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGAGGTT..................................................................................................................................................................................................................................................................24200.153002000000000000000000000000000000001000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGAG.....................................................................................................................................................................................................................................................................21200.153002000000000000000000000000000000000100000000000000000000000000
....CAAGGT--GTCAGAAAA-----ACGGTGGC........................................................................................................................................................................................................................................................................23200.153000000010100000000000000000000010000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTC.................................................................................................................................................................................................................................................................26200.153000100000000000000000000000000010000000000000000000000000000001
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTAG................................................................................................................................................................................................................................................................27200.153000010000000000000000000002000000000000000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTATG---------.....................................................................................................................................................................................................................23200.102001000000010000000000000000000000000000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGAGG....................................................................................................................................................................................................................................................................22200.102002000000000000000000000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGG...................................................................................................................................................................................................................................................................24200.102000000000000000000000000001000000010000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGAGGT...................................................................................................................................................................................................................................................................23200.102000000000000000000000000000010000010000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGT........................................................................................................................................................................................................................................................................19200.102000000100000010000000000000000000000000000000000000000000000000
................................GCGAGGTTAGCC--------CAGCGGTAC.............................................................................................................................................................................................................................................21200.102000000000000000000001000000000000000100000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGTT.....................................................................................................................................................................................................................................................................22200.102000000001001000000000000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGA....................................................................................................................................................................................................................................................................23200.102000000000000000000000000001100000000000000000000000000000000000
.......GGT--GTCAGAAAA-----ACGGTGGCGA......................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGATC....................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
...................AA-----ACGGTGGCGAGGTTAGCC--------C.....................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAAAA...................................................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGA......................................................................................................................................................................................................................................................................20200.051000000000000000000000001000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTTT................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.............TCAGAAAA-----ACGGTGGCGAGGTTAG................................................................................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGAGGTTA.................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.........T--GTCAGAAAA-----ACGGTGGCGAGGTTAT................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000001000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTATG---------TT...................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.........................................GCC--------CAGCGGTACTACTGGCCG....................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................AGCC--------CAGCGGTACTACTGGCCG....................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTAT................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
............GTCAGAAAA-----ACGGTGGCGAGG....................................................................................................................................................................................................................................................................21200.051100000000000000000000000000000000000000000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTATC---------.....................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000001
....CAAGGT--GTCAGAAAA-----ACGGTGG.........................................................................................................................................................................................................................................................................22200.051000000000100000000000000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGA...................................................................................................................................................................................................................................................................24200.051000000001000000000000000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTAA................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................GTACTACTGGCCGGGTATG---------TTC..................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.......................................................CGGTACTACTGGCCGGGTATG---------TTC..................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000001
.......................................TAGCC--------CAGCGGTACTACTGGC......................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
.CATCAAGGT--GTCAGAAAA-----ACGGT...........................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
.................AAAA-----ACGGTGGCGAGGTTAGC...............................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTATG---------T....................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
..............................TGGCGAGGTTAGCC--------CAGCGGT...............................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................................................CAGCGGTACTACTGGCCGGGTATG---------T....................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCC.......................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTATG---------A....................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
.................................CGAGGTTAGCC--------CAGCGGTACTACTG........................................................................................................................................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
........................................................GGTACTACTGGCCGGGTA................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
......AGGT--GTCAGAAAA-----ACGGTGGC........................................................................................................................................................................................................................................................................21200.051000000001000000000000000000000000000000000000000000000000000000
...........................CGGTGGCGAGGTTAGCC--------CAGCGGTACTA...........................................................................................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
.....AAGGT--GTCAGAAAA-----ACGGTGG.........................................................................................................................................................................................................................................................................21200.051000000000000010000000000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTG..................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTAAT---------.....................................................................................................................................................................................................................23200.051000000000000000000000000000000000001000000000000000000000000000
..............CAGAAAA-----ACGGTGGCGAGG....................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
.......GGT--GTCAGAAAA-----ACGGTGG.........................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................AGCGGTACTACTGGCCGG...................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
....CAAGGT--GTCAGAAAA-----ACGGTG..........................................................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAAA....................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................GTACTACTGGCCGGGTATG---------TT...................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
........GT--GTCAGAAAA-----ACGGTGGCGAGGTTAGCC--------C.....................................................................................................................................................................................................................................................30200.051000000000000000000000000000000000000000000000000000000000000001
............GTCAGAAAA-----ACGGTGGCGAGGTTA.................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
............GTCAGAAAA-----ACGGTGGCGAG.....................................................................................................................................................................................................................................................................20200.051000000100000000000000000000000000000000000000000000000000000000
.....................................................AGCGGTACTACTGGCCGGGTATG---------TTC..................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGGGACGGAG--TGGAGGAAG-----GGCACAGTGAT----------GTGTC------------------------AGGAAGTTTCGGCGAAG------AGTTCGAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TCATACGGGC--AGCAGGAAA-----ACAATAGCCCGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
ACATCTAGGC--GGAAGGAGCCGTGGGCGACGGTATGGGGGACT--------TCGTGGGATCGTTGCCAAGGTCC------------------------------AAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ACACCTAGGC--ATGAGGAAG-----ACGATAGCCAGAGTGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACACCTCGGA--ATCAGGAAG-----ACAACCGCCCGGATCGCC--------CAGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACATCTTGGC--GTTAGGAAG-----ACAATTATCAGGATCTCA--------CAGAAGTACTACTGGCCAGGGATG---------TTTCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACACATGGGC--AGCCGGAAG-----ACGATCGCGAGGGTGGCA--------GCGAGGTATTATTGGCCGGGCATG---------CACCGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
ACATCTTGGC--GTTAGAAAG-----ACCATCATCAGAATCTCG--------GAGAAGTACCACTGGCCAGGGATG---------TTTCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACATCTCGGA--ATCAGGAAG-----ACAATATTGGC------AGGTAAGTCCGCAA-------------------------GTGTGACACTTGCCAACGGTTCAAAGT----------------CAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCAAACSizeHit CountTotal NormTotal
No Reads
droTak1
ACACCTGGGC--AGTCGGAAA-----ACGATTGCAAGAGTGGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACACCTGGGC--GTGCGGAAG-----ACGAACACACGAGTAGCC--------CGGAGGTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ACACTTGGGA--AGTCGCAAG-----ACGATTGCAAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.CACTTGGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2693.33300000000000000000000000000000000000000000001000000100100000000000000000000000000000100000000000000000000000000000000000000000000000000010010200000000000050000000000000000000000000000000000000002001000000003000000000000000200000000000000000000000000000000000000000000000000000000000000002000000000000000021000000000000000121000000
ACACTTGGGA--AGTCGCAAG-----ACGA............................................................................................................................................................................................................................................................................2392.33210000000000000000000000000000000000000010101000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000006020000003000100000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....TTGGGA--AGTCGCAAG-----ACGATTGCAA......................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----ACGATTGCA.......................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTGGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2391.67150000000000000000000000000000000000000000000020100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000011000000310000000000000000100000000
.CACTTGGGA--AGTCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................2491.44130000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000200001000100001000000000200000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000101000000
ACACTTGGGA--AGTCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................2491.33120000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000002000000010000000000000000001000000
..ACTTGGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2591.33120000000000000000000000000000000000000000010000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000112000000120000000000000000100000000
...CTTGGGA--AGTCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................2291.22110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................2391.11100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010300000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
.....TGGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2291.11100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000102000000110000000000000000000000000
...CTTGGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2491.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000100000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000100000000
.....TGGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2190.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300020000000001000000101000000000000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................2590.8980000000000000000000000010000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000030000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....TTGGGA--AGTCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................2190.7870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000200000100000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000
....TTGGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2290.7870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000310000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----A...............................................................................................................................................................................................................................................................................20100.7070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----A...............................................................................................................................................................................................................................................................................19100.6060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2790.5650000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----AC..............................................................................................................................................................................................................................................................................21100.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000300000000100000000000000000000000000
......GGGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2190.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2590.4440000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACTTGGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2490.3330000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTTGGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2390.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----ACGA............................................................................................................................................................................................................................................................................2290.3330000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----ACG.............................................................................................................................................................................................................................................................................2190.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----ACG.............................................................................................................................................................................................................................................................................2290.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000
...CTTGGGA--AGTCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................2190.2220000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................1990.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..ACTTGGGA--AGTCGCAAG-----ACGA............................................................................................................................................................................................................................................................................2190.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....TGGGA--AGTCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................2090.2220000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACTTGGGA--AGTCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......GGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..ACTTGGGA--AGTCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................2390.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGGA--AGTCGCAAG-----ACGATTGT........................................................................................................................................................................................................................................................................2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....TTGGGA--AGTCGCAAG-----ACGATTT.........................................................................................................................................................................................................................................................................2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTTGGGA--AGTCGCAAG-----ACG.............................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......GGA--AGTCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.CACTTGGGA--AGTCGCAAG-----ACC.............................................................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..ACTTGGGA--AGTCGCAAG-----ACGATTGTTT......................................................................................................................................................................................................................................................................27100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
ACACTTGGGA--AGTCGCAAG-----................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.CACTTGGGA--AGTCGCAAG-----AC..............................................................................................................................................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droSim2
ACACCTAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
ACACTTGGGA--AGCCGCAAG-----ACGATTGCCAGGATTGCA--------GCCCGGTATCATTGACCAGGAATG---------CATCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
ACACTTGGGA--AGCCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................242016.50330329100
....................G-----ACGATTGCCAGGATTGCA--------GCCCGG................................................................................................................................................................................................................................................252015.553110128525
ACACTTGGGA--AGCCGCAAG-----ACGA............................................................................................................................................................................................................................................................................232015.15303300003
....................G-----ACGATTGCCAGGATTGCA--------GCCC..................................................................................................................................................................................................................................................232010.652130119814
....................G-----ACGATTGCCAGGATTGCA--------GCCCG.................................................................................................................................................................................................................................................24206.35127001234
..................................CAGGATTGCA--------GCCCGGTATCATT.........................................................................................................................................................................................................................................23204.058180001
....................G-----ACGATTGCCAGGATTGCA--------GCC...................................................................................................................................................................................................................................................22203.907861656
ACACTTGGGA--AGCCGCAAG-----ACG.............................................................................................................................................................................................................................................................................22203.156354090
....................G-----ACGATTGCCAGGATTGCA--------GC....................................................................................................................................................................................................................................................21201.603250216
.CACTTGGGA--AGCCGCAAG-----ACGA............................................................................................................................................................................................................................................................................22201.152323000
..................................CAGGATTGCA--------GCCCGGTATCATTGAC......................................................................................................................................................................................................................................2621.0022000
ACACTTGGGA--AGCCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................25200.851700143
ACACTTGGGA--AGCCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................26200.801601141
..................................CAGGATTGCA--------GCCCGGTATCAT..........................................................................................................................................................................................................................................22200.75157080
...............................TGCCAGGATTGCA--------GCCCGGTATCAT..........................................................................................................................................................................................................................................25200.751540101
...................................AGGATTGCA--------GCCCGGTATCATTG........................................................................................................................................................................................................................................23200.551111000
....TTGGGA--AGCCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................22200.55118021
.....TGGGA--AGCCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................22200.4595040
.CACTTGGGA--AGCCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................25200.4088000
ACACTTGGGA--AGCCGCAAG-----AC..............................................................................................................................................................................................................................................................................21200.4087010
....TTGGGA--AGCCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................21200.3576010
.....TGGGA--AGCCGCAAG-----ACGATTGCCAGG....................................................................................................................................................................................................................................................................26200.3573040
................................GCCAGGATTGCA--------GCCCGGTATCATT.........................................................................................................................................................................................................................................25200.3066000
...................AG-----ACGATTGCCAGGATTGCA--------GCCCGG................................................................................................................................................................................................................................................26200.3061050
...............................TGCCAGGATTGCA--------GCCCGGTATCATT.........................................................................................................................................................................................................................................26200.3060060
...............................TGCCAGGATTGCA--------GCCCGGTATCA...........................................................................................................................................................................................................................................24200.2555000
.CACTTGGGA--AGCCGCAAG-----ACG.............................................................................................................................................................................................................................................................................21200.2555000
..............................TTGCCAGGATTGCA--------GCCCGGTATCAT..........................................................................................................................................................................................................................................26200.2553020
.....TGGGA--AGCCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................21200.2552030
....TTGGGA--AGCCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................20200.2041030
..ACTTGGGA--AGCCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................25200.1530021
..........................ACGATTGCCAGGATTGCA--------GCCC..................................................................................................................................................................................................................................................22200.1533000
...............................TGCCAGGATTGCA--------GCCCGGTATC............................................................................................................................................................................................................................................23200.1532010
....................G-----ACGATTGCCAGGATTGCA--------GCCCGGTA..............................................................................................................................................................................................................................................27200.1533000
...............CGCAAG-----ACGATTGCCAGGATTGCA--------GC....................................................................................................................................................................................................................................................26200.1533000
..................................CAGGATTGCA--------GCCCGGTATCATTG........................................................................................................................................................................................................................................24200.1530102
..................................CAGGATTGCA--------GCCCGGTATC............................................................................................................................................................................................................................................20200.1530021
....TTGGGA--AGCCGCAAG-----ACGATTGCCAGG....................................................................................................................................................................................................................................................................27200.1530030
....TTGGGA--AGCCGCAAG-----ACGATTGCCAG.....................................................................................................................................................................................................................................................................26200.1022000
....TTGGGA--AGCCGCAAG-----ACGATTGCC.......................................................................................................................................................................................................................................................................24200.1022000
............AGCCGCAAG-----ACGATTGCCAGGATTGC...............................................................................................................................................................................................................................................................26200.1022000
.....TGGGA--AGCCGCAAG-----ACGATTGCCAGGAT..................................................................................................................................................................................................................................................................28200.1022000
...................AG-----ACGATTGCCAGGATTGCA--------GCCC..................................................................................................................................................................................................................................................24200.1020020
....................G-----ACGATTGCCAGGATTGCA--------GCCCGT................................................................................................................................................................................................................................................25200.1020002
..............................TTGCCAGGATTGCA--------GCCCGGTATC............................................................................................................................................................................................................................................24200.1022000
..............................TTGCCAGGATTGCA--------GCCCGGTATCA...........................................................................................................................................................................................................................................25200.1021010
ACACTTGGGA--AGCCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................27200.1020110
..................AAG-----ACGATTGCCAGGATTGCA--------GCCCGG................................................................................................................................................................................................................................................27200.1020020
....TTGGGA--AGCCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................23200.1020020
.....TGGGA--AGCCGCAAG-----ACGATT..........................................................................................................................................................................................................................................................................20200.1022000
............AGCCGCAAG-----ACGATTGCCAGGATT.................................................................................................................................................................................................................................................................24200.1022000
...........................CGATTGCCAGGATTGCA--------GCCCGG................................................................................................................................................................................................................................................23200.1021010
..................AAG-----ACGATTGCCAGGATTGCA--------GC....................................................................................................................................................................................................................................................23200.0511000
..ACTTGGGA--AGCCGCAAG-----ACGATTG.........................................................................................................................................................................................................................................................................24200.0510010
.....TGGGA--AGCCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................19200.0510010
ACACTTGGGA--AGCCGCAAG-----ACA.............................................................................................................................................................................................................................................................................22200.0510010
ACACTTGGGA--AGCCGCAAG-----AAT.............................................................................................................................................................................................................................................................................22200.0511000
....................G-----ACGATTGCCAGGATTGCA--------GCCCGGTT..............................................................................................................................................................................................................................................27200.0511000
..................................CAGGATTGCA--------GCCCGGTAT.............................................................................................................................................................................................................................................19200.0510010
....................G-----ACGATTGCCAGGATTGCA--------GCCCGA................................................................................................................................................................................................................................................25200.0511000
............AGCCGCAAG-----ACGATTGCCAGGAT..................................................................................................................................................................................................................................................................23200.0511000
......GGGA--AGCCGCAAG-----ACGATTGCCAGGA...................................................................................................................................................................................................................................................................26200.0511000
............AGCCGCAAG-----ACGATTGCCAGG....................................................................................................................................................................................................................................................................21200.0510010
...............................TGCCAGGATTGCA--------GCCCGGT...............................................................................................................................................................................................................................................20200.0510010
...............................TGCCAGGATTGCA--------GCCCG.................................................................................................................................................................................................................................................18200.0510010
..ACTTGGGA--AGCCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................22200.0511000
................................GCCAGGATTGCA--------GCCCGGTATCA...........................................................................................................................................................................................................................................23200.0511000
...........................CGATTGCCAGGATTGCA--------GCCCGGTA..............................................................................................................................................................................................................................................25200.0511000
.....TGGGA--AGCCGCAAG-----ACGATTGT........................................................................................................................................................................................................................................................................22200.0510010
....................G-----ACGATTGCCAGGATTGCA--------GCCA..................................................................................................................................................................................................................................................23200.0510010
..ACTTGGGA--AGCCGCAAG-----ACGA............................................................................................................................................................................................................................................................................21200.0511000
......GGGA--AGCCGCAAG-----ACGATTGCCAG.....................................................................................................................................................................................................................................................................24200.0511000
.............GCCGCAAG-----ACGATTGCCAGGATTGCA--------GC....................................................................................................................................................................................................................................................28200.0511000
.................CAAG-----ACGATTGCCAGGATTGCA--------......................................................................................................................................................................................................................................................22200.0510010
...........................CGATTGCCAGGATTGCA--------GCCCG.................................................................................................................................................................................................................................................22200.0511000
.CACTTGGGA--AGCCGCAAG-----ACGATAC.........................................................................................................................................................................................................................................................................25200.0511000
ACACTTGGGA--AGCCGCAAG-----A...............................................................................................................................................................................................................................................................................20200.0510010
.CACTTGGGA--AGCCGCAAG-----ACGATTGC........................................................................................................................................................................................................................................................................26200.0510001
....................................GGATTGCA--------GCCCGGTATCATTG........................................................................................................................................................................................................................................22200.0511000
...............CGCAAG-----ACGATTGCCAGGATTGCA--------GCC...................................................................................................................................................................................................................................................27200.0511000
................................GCCAGGATTGCA--------GCCCGGTATCATTG........................................................................................................................................................................................................................................26200.0511000
...............................TGCCAGGATTGCA--------GCCCGGTATCAAA.........................................................................................................................................................................................................................................26200.0511000
..........................ACGATTGCCAGGATTGCA--------GCCCGGT...............................................................................................................................................................................................................................................25200.0510010
....TTGGGA--AGCCGCAAG-----ACGA............................................................................................................................................................................................................................................................................19200.0510010
ACACTTGGGA--AGCCGCAAG-----ACGATTGCCA......................................................................................................................................................................................................................................................................29200.0511000
...............................TGCCAGGATTGCA--------GCCCGGTATCATAC........................................................................................................................................................................................................................................27200.0510010
.............................ATTGCCAGGATTGCA--------GCCCGG................................................................................................................................................................................................................................................21200.0510010
...................AG-----ACGATTGCCAGGATTGCA--------GCCCGGA...............................................................................................................................................................................................................................................27200.0511000
...............CGCAAG-----ACGATTGCCAGGATTGCA--------GT....................................................................................................................................................................................................................................................26200.0510010
.................................CCAGGATTGCA--------GCCCGGTATCATT.........................................................................................................................................................................................................................................24200.0511000
..........................ACGATTGCCAGGATTGCA--------GCC...................................................................................................................................................................................................................................................21200.0511000
.CACTTGGGA--AGCCGCAAG-----ACGATTGCC.......................................................................................................................................................................................................................................................................27200.0511000
....................G-----ACGATTGCCAGGATTGC...............................................................................................................................................................................................................................................................18200.0510010
...CTTGGGA--AGCCGCAAG-----ACGA............................................................................................................................................................................................................................................................................20200.0511000
..........................ACGATTGCCAGGATTGCA--------GCCCGG................................................................................................................................................................................................................................................24200.0510010
.CACTTGGGA--AGCCGCAAG-----ACGAT...........................................................................................................................................................................................................................................................................23200.0510010
..................................CAGGATTGCA--------GCCCGGTATCATTT........................................................................................................................................................................................................................................24200.0511000
..............................TTGCCAGGATTGCA--------GCCCGGTAT.............................................................................................................................................................................................................................................23200.0510010
..ACTTGGGA--AGCCGCAAG-----ACG.............................................................................................................................................................................................................................................................................20200.0511000
.....TGGGA--AGCCGCAAG-----ACGATTGCCA......................................................................................................................................................................................................................................................................24200.0511000
..................................CAGGATTGCA--------GCCCGGTATCA...........................................................................................................................................................................................................................................21200.0511000
..................................CAGGATTGCA--------GCCCGGTA..............................................................................................................................................................................................................................................18200.0511000
............AGCCGCAAG-----ACGATTGCCAGGATTG................................................................................................................................................................................................................................................................25200.0510010
ACACTTGGGA--AGCCGCAAG-----ACGATA..........................................................................................................................................................................................................................................................................25200.0510010
..................................CAGGATTGCA--------GCCCGGTATCATTA........................................................................................................................................................................................................................................24200.0511000
droYak3
ACACCTGGGA--AGTCGGAAG-----ACTATGGCGAGGGTGGCA--------GGCAGGTACCACTGGCCAGGAATG---------CATCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.CACCTGGGA--AGTCGGAAG-----ACTATGG.........................................................................................................................................................................................................................................................................25191.6832034100000024
.......GGA--AGTCGGAAG-----ACTATGGCGAGG....................................................................................................................................................................................................................................................................24181.5027025100010000
........GA--AGTCGGAAG-----ACTATGGCGAGG....................................................................................................................................................................................................................................................................23181.1721030000000018
.......GGA--AGTCGGAAG-----ACTATGGCGAGGG...................................................................................................................................................................................................................................................................25181.0018018000000000
ACACCTGGGA--AGTCGGAAG-----ACTATGG.........................................................................................................................................................................................................................................................................26190.8416021000000004
.CACCTGGGA--AGTCGGAAG-----ACTATGGC........................................................................................................................................................................................................................................................................26180.781403400000007
.......GGA--AGTCGGAAG-----ACTATGGCGAG.....................................................................................................................................................................................................................................................................23180.7814012010010000
.......GGA--AGTCGGAAG-----ACTATGGC........................................................................................................................................................................................................................................................................20180.611107220000000
.......GGA--AGTCGGAAG-----ACTATGGCGA......................................................................................................................................................................................................................................................................22180.44808000000000
.......GGA--AGTCGGAAG-----ACTATGGCG.......................................................................................................................................................................................................................................................................21180.39705000020000
........GA--AGTCGGAAG-----ACTATGGCGAGGG...................................................................................................................................................................................................................................................................24180.33604200000000
.....TGGGA--AGTCGGAAG-----ACTATGGCGAG.....................................................................................................................................................................................................................................................................25180.28502300000000
........GA--AGTCGGAAG-----ACTATGGCGAGGGT..................................................................................................................................................................................................................................................................25180.22403100000000
ACACCTGGGA--AGTCGGAAG-----ACTATG..........................................................................................................................................................................................................................................................................25190.21400000000004
ACACCTGGGA--AGTCGGAAG-----ACT.............................................................................................................................................................................................................................................................................22200.20402200000000
.......GGA--AGTCGGAAG-----ACTATGGCGAGGGT..................................................................................................................................................................................................................................................................26180.17303000000000
.....TGGGA--AGTCGGAAG-----ACTATGGCGAGG....................................................................................................................................................................................................................................................................26180.17301200000000
.CACCTGGGA--AGTCGGAAG-----ACTA............................................................................................................................................................................................................................................................................22190.16303000000000
........GA--AGTCGGAAG-----ACTATGGCGAGGGTG.................................................................................................................................................................................................................................................................26180.11202000000000
ACACCTGGGA--AGTCGGAAG-----ACTATGGC........................................................................................................................................................................................................................................................................27180.11201100000000
.....TGGGA--AGTCGGAAG-----ACTATGGCGAGGG...................................................................................................................................................................................................................................................................27180.11200200000000
.......GGA--AGTCGGAAG-----ACTATGGCGAGGT...................................................................................................................................................................................................................................................................25180.11202000000000
..............TCGGAAG-----ACTATGGCGAGGGTGG................................................................................................................................................................................................................................................................23190.11200200000000
.CACCTGGGA--AGTCGGAAG-----ACTATG..........................................................................................................................................................................................................................................................................24190.11202000000000
...............CGGAAG-----ACTATGGCGAGGGTG.................................................................................................................................................................................................................................................................21190.11201100000000
..ACCTGGGA--AGTCGGAAG-----ACTATGG.........................................................................................................................................................................................................................................................................24190.11201100000000
ACACCTGGGA--AGTCGGAAG-----ACTA............................................................................................................................................................................................................................................................................23190.11202000000000
........GA--AGTCGGAAG-----ACTATGGCGAGGGG..................................................................................................................................................................................................................................................................25180.06100100000000
........GA--AGTCGGAAG-----ACTATGGCGA......................................................................................................................................................................................................................................................................21180.06101000000000
...............CGGAAG-----ACTATGGCGAGGGTGGCA--------......................................................................................................................................................................................................................................................24180.06101000000000
........GA--AGTCGGAAG-----ACTATGGCGAG.....................................................................................................................................................................................................................................................................22180.06101000000000
.CACCTGGGA--AGTCGGAAG-----ACTATGGCG.......................................................................................................................................................................................................................................................................27180.06101000000000
.......GGA--AGTCGGAAG-----ACTATGGCGAGGGC..................................................................................................................................................................................................................................................................26180.06100100000000
...............CGGAAG-----ACTATGGCGAGGG...................................................................................................................................................................................................................................................................19190.05101000000000
..............TCGGAAG-----ACTATGGCGAGGGT..................................................................................................................................................................................................................................................................21190.05100100000000
...............CGGAAG-----ACTATGGCGAGGGTGG................................................................................................................................................................................................................................................................22190.05101000000000
....CTGGGA--AGTCGGAAG-----ACTATGG.........................................................................................................................................................................................................................................................................22190.05101000000000
.....TGGGA--AGTCGGAAG-----ACTATGG.........................................................................................................................................................................................................................................................................21190.05100000010000
.............GTCGGAAG-----ACTATGGCGAGGGTGGCC--------......................................................................................................................................................................................................................................................26190.05100100000000
..............TCGGAAG-----ACTATGGCGAGGGTGGC...............................................................................................................................................................................................................................................................24190.05101000000000
...............CGGAAG-----ACTATGGCGAGGGTGGT...............................................................................................................................................................................................................................................................23190.05100100000000
.............GTCGGAAG-----ACTATGGCGAGGGTGG................................................................................................................................................................................................................................................................24190.05100100000000
..ACCTGGGA--AGTCGGAAG-----ACTAT...........................................................................................................................................................................................................................................................................22190.05101000000000
............AGTCGGAAG-----ACTATGGCGAGG....................................................................................................................................................................................................................................................................21190.05101000000000
............AGTCGGAAG-----ACTATGGCGAGGGT..................................................................................................................................................................................................................................................................23190.05101000000000
..............TCGGAAG-----ACTATGGCGAGGGTG.................................................................................................................................................................................................................................................................22190.05101000000000
ACACCTGGGA--AGTCGGAAG-----ACTATATG........................................................................................................................................................................................................................................................................27190.05101000000000
...CCTGGGA--AGTCGGAAG-----ACTATGG.........................................................................................................................................................................................................................................................................23190.05101000000000
ACACCTGGGA--AGTCGGAAG-----AC..............................................................................................................................................................................................................................................................................21200.05100100000000
droEre2
TCACCTAGGT--AGTCGGAAG-----ACGATTGCGAGGGTGGCA--------GCCCGGTACCACTGGCCAGGAATGCCAGAGGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....TAGGT--AGTCGGAAG-----ACGATTGCGAGGGT..................................................................................................................................................................................................................................................................2817.0070000007
...............................TGCGAGGGTGGCA--------GCCCGGTACCAC..........................................................................................................................................................................................................................................2520.5011000000
....................G-----ACGATTGCGAGGGTGGCA--------GCCCGG................................................................................................................................................................................................................................................2550.4020000002
...............CGGAAG-----ACGATTGCGAGGGTGGCA--------AAT...................................................................................................................................................................................................................................................2730.3311000000
...........................CGATTGCGAGGGTGGCA--------GCCCGGTAC.............................................................................................................................................................................................................................................2650.2011000000
....................G-----ACGATTGCGAGGGTGGCA--------GCCCG.................................................................................................................................................................................................................................................24120.0811000000

Generated: 05/18/2015 at 01:32 AM