ID:

dps_1769

 Coordinate:

Unknown_group_129:12175-12325 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.8 -10.2 -10.0

Flybase annnotation

exon [dpse_GLEANR_6734:1]; CDS [Dpse\GA27705-cds]; intron [Dpse\GA27705-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGTTCCGTTATGTACCGAATCAATTGCTGCTGCATCTTACCCCTTGCACGTTTTTTTTTTTTAAGACCTGATCGTGTTTTACATGGGCCCTTTGGACGGCTCTCTCTTGCCTTCCAGTGGGCTCTCTTGCTCGCTCCCGTTTGAAAATTATCCGCGCCTCTCGCCGCGTTAACCGTAGGGTGCCCCGGGGTTTTGTTAGCTTTCCTCTTGTTCCCTTTTTATACCCGATACTCAAAATGAGTATTGGGGT
***********************************************************************************************************.........(((((((......))))))).............................************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 SRR902010
ovaries
........TTATGTACCGAATCAATTGCTGCTG.......................................................................................................................................................................................................................... 25 0 1 11.00 11 11 0 0 0
............................................................................................................................................TTTGAAAATTATCCGCGCCTCTCGC...................................................................................... 25 0 1 5.00 5 5 0 0 0
.........TATGTACCGAATCAATTGCTGCTGCA........................................................................................................................................................................................................................ 26 0 1 3.00 3 3 0 0 0
........TTATGTACCGAATCAATTGCTGCTGC......................................................................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0
........TTATGTACCGAATCAATTGCTGCT........................................................................................................................................................................................................................... 24 0 1 3.00 3 1 1 1 0
...........TGTACCGAATCAATTGCTGCTGCATCT..................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
........TTATGTACCGAATCAATTGCTGC............................................................................................................................................................................................................................ 23 0 1 2.00 2 1 1 0 0
.........TATGTACCGAATCAATTGCTGCTGC......................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
............................................................................................................................................TTTGAAAATTATCCGCGCCTCTCG....................................................................................... 24 0 1 1.00 1 1 0 0 0
...........................................................................................................TTGCCTTCCAGTGGGCTCTCTTG......................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................TAGCTTTCCTCTTGTTCCCTTTT............................... 23 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................TTCCCTTTTTATACCCGATACTCAAAA............. 27 0 1 1.00 1 1 0 0 0
........TTATGTACCGAATCAATTGCTGCTGCATC...................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
.........................................................TTTTTTAAGACCTGATCGTGTTT........................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
......CGTTATGTACCGAATCAATTGCTGC............................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
..........................................................................................................................................CGTTTGAAAGTTATCCGCGCCTCTCG....................................................................................... 26 1 2 1.00 2 2 0 0 0
..............................................................TAAGACCTGATCGTGTTTTACATGGGC.................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
............................................................................................................................................TTTGAAAATTATCCGCGCCTCTCGCC..................................................................................... 26 0 1 1.00 1 1 0 0 0
.....................................................................................................TCTCTCTTGCCTTCCAGTGGGCTCT............................................................................................................................. 25 0 1 1.00 1 1 0 0 0
...........................................................................TGTTTTACATGGGCCCTTTGGACGG....................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...TTCCGTTATGTACCGAATCAATTGCTG............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
.............................................................................................TGGACGGCTCTCTCTTGCCTT......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................TTTTTTTTTTTAAGACCTGATCGT............................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
....................................................................................TGGGCCCTTTGGACGGCTCTCGTT............................................................................................................................................... 24 2 1 1.00 1 1 0 0 0
..............................................................TAAGACCTGATCGTGTTTTACATGGGCC................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0
........................................................................................................................................CCCGTTTGAAAGTTATCCGCGCCTC.......................................................................................... 25 1 1 1.00 1 1 0 0 0
....TCCGTTATGTACCGAATCAATTGCT.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCTCGC...................................................................................... 26 1 12 0.92 11 11 0 0 0
...................................................................................................................................................................................................GTTGGCTTTCCTCTAGATCCC................................... 21 3 2 0.50 1 1 0 0 0
........................................................................................................................................GGCGTTTGAAAGTTATCCGCGCCTCTCGC...................................................................................... 29 3 2 0.50 1 1 0 0 0
............................................................................GTTTAACAGGGGCCCTTT............................................................................................................................................................. 18 2 2 0.50 1 1 0 0 0
..............................................................................TTTACATGGGCCCTTTGGACG........................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0
.....................................................................................................TCTCTCTTGCCTTCCAGTTGGCTC.............................................................................................................................. 24 1 8 0.50 4 4 0 0 0
....................................................................................................................................................................................................................TCCCTTTTTATACCCGATACTCAAAA............. 26 0 3 0.33 1 1 0 0 0
..............................................................................................GGACGGCTCTCTCTTGCCTTC........................................................................................................................................ 21 0 4 0.25 1 1 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCTTG....................................................................................... 25 2 12 0.25 3 3 0 0 0
.....................................................................................................TCTCTCTTGCCTTCCAGTTGGCTCTCT........................................................................................................................... 27 1 8 0.25 2 2 0 0 0
.....................................................................................................TCTCTCTTGCCTTCCAGACGGCTCTC............................................................................................................................ 26 2 5 0.20 1 1 0 0 0
.....................................................................................................TCTCTCTTGCCTTCCAGACGGCTCT............................................................................................................................. 25 2 5 0.20 1 1 0 0 0
....................................................................................................CTCTCTCTTGCCTTCCAGACGGCTC.............................................................................................................................. 25 2 5 0.20 1 0 0 1 0
.....................................................................................................................................................TATCCGCGCCTCTCGCCGCGTTAACC............................................................................ 26 0 12 0.17 2 2 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCTTGC...................................................................................... 26 2 12 0.17 2 2 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCTCG....................................................................................... 25 1 12 0.17 2 2 0 0 0
....................................................................................................CTCTCTCTTGCCTTCCAG..................................................................................................................................... 18 0 6 0.17 1 1 0 0 0
..........................................................................................................................................AGTTTGAAAGTTATCCGCGCCTCTCGC...................................................................................... 27 2 13 0.15 2 2 0 0 0
............................................................................................................................................................................................................................TATACCCGATACTCAAAATGAGTAT...... 25 0 20 0.15 3 0 3 0 0
.....................................................................................................TCTCTCTTGCCTTCCAGTTGGCT............................................................................................................................... 23 1 8 0.13 1 1 0 0 0
..............................................................................................GGACGGCTCTCTCTTGTGTTCAAG..................................................................................................................................... 24 3 9 0.11 1 1 0 0 0
....................................................................................................................................................................................................................................ATACTCAAAATGAGTATTGGG.. 21 0 20 0.10 2 2 0 0 0
..........................................................................................................................................................................................................................TTTATACCCGATACTCAAAA............. 20 0 20 0.10 2 0 0 0 2
................................................................................TACATGGGCCCGTTGGACGGCTC.................................................................................................................................................... 23 1 10 0.10 1 1 0 0 0
............................................................................GTTTAACAGGGGCCCTTTA............................................................................................................................................................ 19 3 11 0.09 1 1 0 0 0
.............................................................................................................................................TTGAAACTTATCCGCGCCTCTC........................................................................................ 22 1 11 0.09 1 1 0 0 0
............................................................................................................................................TTTGAAATTTATCCGCGCCTCTCG....................................................................................... 24 1 11 0.09 1 1 0 0 0
............................................................................................................................................TTTGAAACTTATCCGCGCCTCTCGCC..................................................................................... 26 1 11 0.09 1 0 1 0 0
..............................................................................ATTACATGGTCCCTTGGGACG........................................................................................................................................................ 21 3 11 0.09 1 0 0 1 0
............................................................................................................................................TTTGAAATTTATCCGCGCCT........................................................................................... 20 1 11 0.09 1 1 0 0 0
............................................................................................................................................TTTGAAACTTATCCGCGCCTCTCGC...................................................................................... 25 1 11 0.09 1 1 0 0 0
...........................................................................CGTTTAACAGGGGCCCTTT............................................................................................................................................................. 19 3 11 0.09 1 1 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCTTGCC..................................................................................... 27 2 12 0.08 1 1 0 0 0
.........................................................................................................................................GCATTTGAAAGTTATCCGCGCCTCTCGC...................................................................................... 28 3 12 0.08 1 1 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCTCGCCG.................................................................................... 28 1 12 0.08 1 1 0 0 0
....................................................................................................................................................TTATCCGCGCCTCTCGCCG.................................................................................... 19 0 12 0.08 1 1 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCT........................................................................................... 21 1 12 0.08 1 1 0 0 0
..........................................................................................................................................CCTTTGAAAGTTATCCGCGCCTCTCGC...................................................................................... 27 2 12 0.08 1 1 0 0 0
................................................................................................................TTCCAGAGGGCTCTCTCGCCCG..................................................................................................................... 22 3 12 0.08 1 0 0 1 0
....................................................................................................................................................TTATCCGCGCCTCTCGCCT.................................................................................... 19 1 12 0.08 1 1 0 0 0
...........................................................................................................................................GTTTGAAAGTTATCCGCGCCTCA......................................................................................... 23 2 12 0.08 1 0 1 0 0
.....................................................................................................................................................TATCCGCGCCTCTCGCCG.................................................................................... 18 0 12 0.08 1 1 0 0 0
.....................................................................................................................................................TATCCGCGCCTCTCGCCA.................................................................................... 18 1 12 0.08 1 1 0 0 0
.....................................................................................................................................................TATCCGCGCCTCTCGCCGC................................................................................... 19 0 12 0.08 1 1 0 0 0
....................................................................................................................................................TTATCCGCGCCTCTCGCC..................................................................................... 18 0 12 0.08 1 1 0 0 0
..........................................................................................................................................AGTTTGAAAGTTATCCGCGCCTCTTGC...................................................................................... 27 3 13 0.08 1 1 0 0 0
..........................................................................................................................................AGTTTGAAAGTTATCCGCGCCTCTCGCC..................................................................................... 28 2 13 0.08 1 1 0 0 0
....................................................................................................................................................TTATCCGCGCCTCTCGCCGT................................................................................... 20 1 13 0.08 1 1 0 0 0
..........................................................................................................................................AGTTTGAAAGTTATCCGCGCCTCTCG....................................................................................... 26 2 13 0.08 1 1 0 0 0
....................................................................................................................................................................................................TTGGCTTTCCTCTAGATCCC................................... 20 3 15 0.07 1 1 0 0 0

Anti-sense strand reads

GACAAGGCAATACATGGCTTAGTTAACGACGACGTAGAATGGGGAACGTGCAAAAAAAAAAAATTCTGGACTAGCACAAAATGTACCCGGGAAACCTGCCGAGAGAGAACGGAAGGTCACCCGAGAGAACGAGCGAGGGCAAACTTTTAATAGGCGCGGAGAGCGGCGCAATTGGCATCCCACGGGGCCCCAAAACAATCGAAAGGAGAACAAGGGAAAAATATGGGCTATGAGTTTTACTCATAACCCCA
**************************************************************************************.........(((((((......))))))).............................*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 GSM343916
embryo
 M059
embryo
 SRR902011
testis
...................................................................................................................................................................................................................AAGGGAAAAATATGGGCTATGAGTT............... 25 0 1 6.00 6 6 0 0 0 0 0
...................................................................................................................................................................................................................AAGGGAAAAATATAGGCTATGAGTT............... 25 1 1 5.00 5 5 0 0 0 0 0
..............................................................................................................................GAACGAGCGAGGGCAAACTTTTAA..................................................................................................... 24 0 1 3.00 3 2 0 1 0 0 0
.................................................................................................................................CGAGCGAGGGCAAACTTTCAA..................................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0
........................................................................................GGGAAACCTGCCGAGAGAGAACG............................................................................................................................................ 23 0 1 3.00 3 3 0 0 0 0 0
.................................................................................................................................CGAGCGAGGGCAAACTTTCA...................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.................................................................................................................................................................................................................ACAAGGGAAAAATATGGGCTATGAGTT............... 27 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................................................................................................AGGGAAAAATATGGGCTATGAGTT............... 24 0 3 2.00 6 5 0 1 0 0 0
..................................................................................................................................................................................................................GAAGGGAAAAATATGGGCTATGAGTT............... 26 1 3 1.67 5 5 0 0 0 0 0
.........................................................................................GGAAACCTGCCGAGAGAGAACG............................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................AAAGAGCGAGCGAGGGCAAACTTTCA...................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................GAGCGAGCGAGGGCAAACTTTCAA..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................AACTGCCGAGAGAGAACG............................................................................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................GAGAACGAGCGAGGGCAAACTTTTAA..................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................AGGGCAAACTTTTAATAGGCGCG............................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................CGGAGAGCGGCGCAATTGGCATCC....................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................AGCGAGCGAGGGCAAACTTTCA...................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................TAACGACGACGTAGAATGGGGAACG........................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................AGAACGAGCGAGGGCAAACTTTTA...................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
........................................................AAAAAAATTCTGGACTAGCACAAAAT......................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CGAAAGGAGAACAAGGGAAAAATAT........................... 25 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................GAAGGGAAAAATATGGGCTATGAGT................ 25 1 4 1.00 4 3 0 0 0 0 1
.................................................................................................................................................................................TCCCACGGGGCCCCAAAACAATCG.................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................GCGGAGAGCGGCGCAATTGGCATCCC...................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
................GCTTAGTTAACGACGACGTAGAATG.................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................AACGAGCGAGGGCAAACTTTTAA..................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.......................................................AAAAAAAATTCTGGACTAGCACAAAAT......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................GCGAGCGAGGGCAAACTTTCAA..................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................CAAGGGAAAAATATGGGCTATGAGTT............... 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................AGCGAGCGAGGGCAAACTTTCAA..................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCGGGAAACCTGCCGAGAGAGAACG............................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
...................................................AAAAAAAAAAAAGTCTGGCCT................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0
...............GGCTTAGTTAACGACGACGTAGAAT................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................CTGCCGAGAGAGAACGGAAGGTCT.................................................................................................................................... 24 1 4 0.75 3 2 0 0 1 0 0
..................................................................................................................................................................................................................AAAGGGAAAAATATAGGCTATGAGTT............... 26 2 11 0.73 8 7 0 1 0 0 0
....................................................................................................................................................................................................................AGGGAAAAATATAGGCTATGAGTT............... 24 1 3 0.67 2 2 0 0 0 0 0
.....................................................................................................................................................................................................................GGGAAAAATATGGGCTATGAGTT............... 23 0 10 0.60 6 4 1 1 0 0 0
..............................................................................................................................................................GAAAGCGCCGCTATTGGCATC........................................................................ 21 3 2 0.50 1 0 0 0 1 0 0
............................................................................................................................................................................................CCCAAGACAATCGAAAGGACA.......................................... 21 2 2 0.50 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................GGGAAAAATATGGGCTATGAGT................ 22 0 11 0.36 4 0 2 0 0 0 2
....................................................................................................GAGAGAGAACGGAAGGTCT.................................................................................................................................... 19 1 6 0.33 2 2 0 0 0 0 0
..............................................................................................CCTGCCGAGAGAGAACGGAAG........................................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................CTGCCGAGAGAGAACGGAAGGTC..................................................................................................................................... 23 0 4 0.25 1 0 0 1 0 0 0
.............................................................................................TCCTGCCGAGAGAGAACGGAAG........................................................................................................................................ 22 1 4 0.25 1 1 0 0 0 0 0
..............................................................................................CCTGCCGAGAGAGAACGGAAGGTCT.................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................................................................................................AGGGAAAAATATGGGCTATGAGT................ 23 0 4 0.25 1 0 1 0 0 0 0
...............................................................................................CTGCCGAGAGAGAACACAAGTTC..................................................................................................................................... 23 3 9 0.22 2 0 2 0 0 0 0
................................................................................................TGCCGAGAGAGAACGGAAGGTCT.................................................................................................................................... 23 1 5 0.20 1 1 0 0 0 0 0
..............................................................................................CCTGCCGAGAGAGAACGGA.......................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................................................................GAAGGGAAAAATGTGGGCTATGAGTT............... 26 2 5 0.20 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGAAAAATATGGGCTATGAGTT............... 22 0 20 0.20 4 4 0 0 0 0 0
..................................................................................................................................................................................................................TAAGGGAAAAATATGGGCTATGAGTT............... 26 1 6 0.17 1 0 0 0 0 1 0
..............................................................................................CCTGCCGAGAGAGAACGGGAGGT...................................................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................................................................................................AAAAGGGAAAAATATGGGCTATGAGTT............... 27 1 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGGAAAAATATAGGCTATGAGTT............... 23 1 16 0.13 2 2 0 0 0 0 0
..............................................................................................CCTGCCGAGAGAGAACACAAGT....................................................................................................................................... 22 3 9 0.11 1 1 0 0 0 0 0
..................................................................................................................................................................................................................AAAGGGAAAAATATGGGCTATGAGTT............... 26 1 10 0.10 1 1 0 0 0 0 0
........................................................................................................................................................................................................................AAAAATATGGGCTATGAGTTTTA............ 23 0 20 0.10 2 2 0 0 0 0 0
............................................................AAAATCTGGACTAGCACGC............................................................................................................................................................................ 19 3 11 0.09 1 1 0 0 0 0 0
..................................................................................................................................................................................................................AAAGGGAAAAATATAGGCTATGAGTTT.............. 27 2 11 0.09 1 1 0 0 0 0 0
.....................................................AAAAAAAATATTCAGGACT................................................................................................................................................................................... 19 2 12 0.08 1 1 0 0 0 0 0
....................................................................................................................................................................................................................AGGGAACAATATGGGCTATGAGTT............... 24 1 12 0.08 1 1 0 0 0 0 0
.....................................................................................................................................................ATAGGCGCGGAGAACGGCGCAAT............................................................................... 23 1 12 0.08 1 1 0 0 0 0 0
......................................................................................................................................................TAGGCGCGGAGAGCGGCG................................................................................... 18 0 13 0.08 1 1 0 0 0 0 0
............................................................................................................................................................CGGAGAGCGGCGCAATTGG............................................................................ 19 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................CGCGGAGAGCGGCGCAATTGG............................................................................ 21 0 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................GGAGAGCGGCGCAATTGG............................................................................ 18 0 15 0.07 1 1 0 0 0 0 0
...............................................................................................................................................CCTTTTATAGCCGCGGAGA......................................................................................... 19 3 16 0.06 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................GGGAAAAATATAGGCTATG................... 19 1 19 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GAAAAATATGGGCTATGAGTTT.............. 22 0 20 0.05 1 1 0 0 0 0 0
....................................................AAAAAAAAAAAGGCTGGGCTA.................................................................................................................................................................................. 21 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGAAAAATATGGGCTATGAG................. 20 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GGAAAAATATGGGCTATGAGT................ 21 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_129:12125-12375 + dps_1769 CTGTTCCGTT--ATGTACCGAATCAATTGCTGCTGCATCTTACCCC---TTGCACGTTTTTTTTTTTTAAGACCTGATCGTGTTTTACATGGG------CCCTTTGGACGGCTCTCTCTTGC------------------------------------------------------------CTTCC--------------------------------------AGTGGGCT-------------------CT-------------------------------CTTGCTCGCTCCCGTTTGAAAA---TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCGC---------GTT-------------------------------------------------------------------------------------------------------------AACCGTAGGGTGCCCCGGGG------TTTT---------GTTAGC--------------------------------------------------------------------------------------------------------------TTTCCTCT-----TGTTCCCTTTTT------------------ATACCCGATAC-TCAA----AA-TGAGTATTGGGGT
droPer2 scaffold_648:3742-3941 + CTGTTCCGTT--ATGTACCGAATCAAGTGCTGCTGTATCTTACCCT---TTGCACGTTTTTTTTTTTTAAGACCTGATCGTGCGCTGCTTCCG------CCTTTATAAGGGATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTGCTCGCTCCCGTTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------GCGC---------GTT-------------------------------------------------------------------------------------------------------------AACCAGAGGGTGCCCCGGGG------TTTT---------GTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG
droWil2 scf2_1100000004961:2541722-2541970 + CTGTTTCGTG--AT---------TAGTGTTTGGTGCATTTAATTTT---GTTTTCTTT---------------------------------------------------------------TTATTTTTTTCT-CTCTCGTCATT-GCT-TCTGCAGTTGCTCCTCTCATCGC-----C--------CCCATCTT------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCACTTTTGTAAGGCCGCCTCTCAAGGCTCCGTTTATAACTGTTCTTGCACTCTC--------------------------------------------------------TCTT------------------ATACTG---------T-------GCACTCTAGCTGT
droVir3 scaffold_12932:1141094-1141282 + CTGCTCTTGT--T-----------------------------------------------------------------------------GCT----------------------------GT-------------------------T-CTTGTT-----------------GCTGCT--------------------------------------------------------GCCTTTTGC---TTT--------------------------------------------------------------------------------TACCC-TGAAATGTTATCCACTTTACATGGACTCTGGTCTGATGCTGTTTCGCTGGATAGCGCTTTCTCGATT-------------------------------------------------------------------------------------------------------------------------TCTGCTG---------------------------------------------------------------------------------------------------------------------------TTGCTTTCATTTTTATTTACTGC----------AGTTCTGTTTTTTTTTTTTT-----TTTTTGCTTTTT------------------ATACCCTATAC-TCA---------------------
droMoj3 scaffold_6541:2185729-2185890 + GTCTTTTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------GC----------------------------------------------------CGA------A--------------------------------------------------------CTCTCGAGCTTTCGTGATTAACTC---TTCCTTGCACCGCTGGTAGATCCACCCGACGCT----ATTT----ATTTGTTT-----------------C--TCTCC----TTTTTTATACCCTGAAC-CCATTGAAAATGGGAAATCAGGGA
droGri2 scaffold_15110:4365974-4366140 - GCTCTCTCTC--T------------------------------------------------------------------------------------------------------------CTCTCTCTTTCGCTCT-CTTTACTTGCTCTCAGCAGTTGGATGA----------------------------------------TCCTTCGTTATGTTACACACAG----CATTAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAA----------------------------------CG----------------------------------------------------GGA------ATTT---------GTTAGCTCTTGCT---TT-------------------------------------------------------A-------------------CACCTGA-------------------------------TACCATTCTT------------------ATACACTGTAC-CAATTAAAAATGAGTAAAAATGGT
droAna3 scaffold_13230:3307194-3307395 + CGCCTGACCT--C-----------------------------------------------------------------------------CTCCTCGATCAT----------------------T-TTTTTCGGTCC-TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGTTTTTCTGGGG-----CCATATTCATGGCCCTCGCTCCCA----------------------CGGTTCCGGGTTCTCTTGCCTGTTCTCTTCCTGGGGATGGGGTGTCAGTGGCGCG---------------------------TCCACCG-----------------------------------------------------CTTTCTTCCT-----------------AGC------CCACTGAAC-------------------------CT-------------------------------------------------------------------------------------TTTT----TTTTGGTT-----------------T--CCCCT----CCTTTTATACC------CTA---------------GCAGAGG
droBip1 scf7180000396664:6033-6157 - GAGCTCTATA--T------------------------------------------------------------------------------------------------------------T---------TGC-----------------------------------TCAC-----C--------TCTATTTT------------------------G---------------------------------------------------------------------------------TTAAAA---AAATTCACACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC------------------------------------------------ATTCCCTGCCCAAGCAGGGAGTGGCGTGGAG------CT-----------------------------------------------------------------------------------------------------------------------TTAT----ATTTGCTC-----------------ACCTCTAT----TTTTTTATACC------CTTGC---------------AGAGG
droKik1 scf7180000302544:896865-896999 - CGGTGTGCATTCG-----------------------------------------------------------------------------TAC----------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCACACATGAGAAATATGTTAATTGCGACATTTGCCGATTTTGCTGTGG-----TCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTC--------------------------------------------------------------------------------------------------------------------ATAAGCTGC---------GAGTTTTGTTTTTC-----TCGGTTTTG---------------TTTGCTATTTTTTATACC------CTTGC---------------A--GG
droFic1 scf7180000453782:833814-833898 + CTCGCCGCCA--T-----------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTCTC----------------------------------AG-GGACTTT----------------ATTCTCTTTCC----------------------------------------------------------AGTTT--------------------------------------------------------------------------------------------------TC--------CGC-----------TCTGCC-ATATTTATAAC------CTTGC-------AGAGCAAAG--GG
droEle1 scf7180000491046:4259355-4259495 + TTTCGTTCGT--A-----------------------------------------------------------------------------TTT----------------------------C---------------------------------------------------------TGTTTGCTCTTTTGTTTTTAACTGAATTT---------------------------------------------------------------------------------------------TAAATTGTATTAGCCGGGGCGCTCG---------------------------------------------------------------------------------------------C----------------------------------------------CATCGGCATCAATCA-----------------------------------------------------TTTTTTGCCA-----------------AAG------CCTT-------------------------TTTGGCTT--------------------------------------------------------------------------------------------------TT----------------T---ACTTT----GTTTTTATACC------CTTGC-------------AAGGGGA
droRho1 scf7180000776953:4358-4486 - GGCCATCTCT--C-----------------------------------------------------------------------------T------------------------------C------------------------------------------------------------GGTCT--------------------------------------AGTGTGCC-------------------CC-------------------------------TACGCGCGCGATCGTTGG--------------------------------------------------------------------------------------------------------------------------------------------CGCGCGCGC--GTTCTTAGTTTGAATCGGAATTAAA---------------------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------GCTTTTTC-----GTTTAACTTTTT------------------ATACCCGTTAC-TCGT-------AGAGTAAAAGGGT
droBia1 scf7180000297469:331-478 - CTCTCTTGCT--T-----------------------------------------------------------------------------TAT----------------------------T---------------------------------------------------------TA-------------------CATGG----------------------------------------------------------------------------------------------TGTGAAAG---TTGTTAGTGC---------------------------------------------------------------------------------------------------------------------------CGCACAAGCCACGCTC-------AGTCGAT-----------------------------------------------------------------------------------------------------AGAATATTTTTTCTCTCGAGTTCTCTT-------------------------------------------------------ACGTTTATTTTCGTTTATT-TTCGC------GGTCTC----------------------------------GCGCT----CTTATTATTCC------CTTGC-------------AGAGGGT
droTak1 scf7180000414078:8457-8638 - TTTTTACAAA--C-----------------------------------------------------------------------------TAC----------------------------T-----------------------------------------------------------------------------------------------------------------GTCACTTGTAAGGGTCTTCGGTACATTCTTCACTTCCGGAGTCTTGGTGAGCTGCCTTTTCGCGCATGGAGA---TTTTTCACGCATCTCC---------------------------------------------------------------------------------------------ATGC---------GTG---GAGGCTCTGTAGGCTCCACCT------------------------------------------------------------------------------------------------------GGC------CAATGGGAT----------------------------------------------------------------------------------------------------------------CTGA----ATTTGGAA-----------------A--TATAT----TTTTTTATACC------CTTGC---------------AGAGC
droEug1 scf7180000409815:7181-7410 - CTTCGTCGTT--TAGTCCCAAAAGAATTTATATTGAAATTTAATCGATCTCGGACATTTTTGTTTTTAAGTAT-------------------------------------------------------------CTC-TCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTTTCGTCGCAT-----TCAAATCCATTAAGCTCGCGTAGT----------------------CGTTTTCGGTTTTTTCTGTCCCTATCGTTATCGAAAACAA----------------------ATTTATGCAACGGTTATACTTGCTT----------------TCGAT----------------------------------------------------------------GCACTC------------------------------------------------------------------------------------------------------------------------------------------------TTTAGTTTTT------------------ATACCCGTAAC-TCAA-------GGAGTAAAAGGGT
dm3 chrX:84884-85005 + TCGCTCACGC--G-----------------------------------------------------------------------------TTC----------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATCAAAG---CAAACCATGCTTTTCG---------------------------------------------------------------------------------------------ATAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----TTTA---------CTGCGA--------------------------------------------------------------------------------------------------------------TTTCTTTT-----TAGTATTTATAC------------------ATACT--TGAT-ACTC-------TGACTTATAGGGT
droSim2 2r:1874634-1874763 - TCTTTTTTAT--C-----------------------------------------------------------------------------TTC----------------------------TTCT-TTTTTCAATCC-CTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTCCGCCTTTCGACTGCTGTGCCAGATCTTTATAACTCTCAGCTATA-------------------------------GCACAT------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTTT------------------ATACCCGTTAC-TCGT-------TGACTAAAAGGGC
droSec2 scaffold_190:4947-5077 - TCTTTTTTAT--C-----------------------------------------------------------------------------TTC----------------------------TTCTTTTTTTCAATCC-CTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTCCGCCTTTCGACTGCTGTGCCACAACTTTATAACTCTCAGCTATA-------------------------------GCACAT------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTTT------------------ATACCCGTTAC-TCGT-------TGACTAAAAGGGC
droYak3 X:1729818-1729954 + TTGGGCGCCT--C-----------------------------------------------------------------------------TGT----------------------------C---------------------------------------------------------TGGCTGCC--------------------------------------AGTTGGCT--GTCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCACTTCGGTTTCAGTTTC-------------------------------------------GACT----TCCACCAATTTTCTCCGGCT----------------------------------------------------------------------------CCTC-------------------------TCCCACT----------------------------------------------------------------------------------------------------T-----TCTTCATTTTTT------------------ATACCCGTTAC-TCGT-------AGAGTAAAAGGGT
droEre2 scaffold_4784:24632420-24632620 + TTTTTTTCAA--T-----------------------------------------------------------------------------ACC----------------------------AT-------------------------T-TTCCGT-----------------TTTACTTC-------------------CCTCT------------------------------------TGCGGCTGT--------------------------------------------------------------------------------TTCTCCTGAAT-----TCCACTCCCCGAAAATCCTGTTGCTATGCTGCTATTC---------------TGATCCTTACTGCCTTTGCTGCTTCACTTGCCTC----------------------TTTCTTGCTCGGGCTCTGTTTTACT----------------TCCGT----------------------------------------------------------------AATCTC------------------------------------------------------------------------------------------------------------------------------------------------TTACATAATT------------------GTACCCGTTAC-ACGT-------AGAGTAAAAGGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTGTTCCGTT--ATGTACCGAATCAATTGCTGCTGCATCTTACCCC---TTGCACGTTTTTTTTTTTTAAGACCTGATCGTGTTTTACATGGG------CCCTTTGGACGGCTCTCTCTTGC------------------------------------------------------------CTTCC--------------------------------------AGTGGGCT-------------------CT-------------------------------CTTGCTCGCTCCCGTTTGAAAA---TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCGC---------GTT-------------------------------------------------------------------------------------------------------------AACCGTAGGGTGCCCCGGGG------TTTT---------GTTAGC--------------------------------------------------------------------------------------------------------------TTTCCTCT-----TGTTCCCTTTTT------------------ATACCCGATAC-TCAA----AA-TGAGTATTGGGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........TT--ATGTACCGAATCAATTGCTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25111.001101100000000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................2515.0050500000000
.........T--ATGTACCGAATCAATTGCTGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030300000000
........TT--ATGTACCGAATCAATTGCTGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030300000000
........TT--ATGTACCGAATCAATTGCTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030110100000
.............TGTACCGAATCAATTGCTGCTGCATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
........TT--ATGTACCGAATCAATTGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020110000000
.........T--ATGTACCGAATCAATTGCTGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................TTGC------------------------------------------------------------CTTCC--------------------------------------AGTGGGCT-------------------CT-------------------------------CTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGC--------------------------------------------------------------------------------------------------------------TTTCCTCT-----TGTTCCCTTTT.......................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTTTTT------------------ATACCCGATAC-TCAA----AA-.............2711.0010100000000
........TT--ATGTACCGAATCAATTGCTGCTGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..............................................................TTTTTTAAGACCTGATCGTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......CGTT--ATGTACCGAATCAATTGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................TAAGACCTGATCGTGTTTTACATGGG------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CC.....................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
................................................................................................................TCTCTCTTGC------------------------------------------------------------CTTCC--------------------------------------AGTGGGCT-------------------CT-------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................TGTTTTACATGGG------CCCTTTGGACGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...TTCCGTT--ATGTACCGAATCAATTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................................................................TGGACGGCTCTCTCTTGC------------------------------------------------------------CTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................TTTTTTTTTTTAAGACCTGATCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................................TAAGACCTGATCGTGTTTTACATGGG------CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
....TCCGTT--ATGTACCGAATCAATTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000100
...................................................................................TTTACATGGG------CCCTTTGGACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTTTTT------------------ATACCCGATAC-TCAA----AA-.............2630.3310100000000
.........................................................................................................GGACGGCTCTCTCTTGC------------------------------------------------------------CTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
.......................................................................................................................................................................................................................................................................................................................TATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCGC---------GTT-------------------------------------------------------------------------------------------------------------AACC......................................................................................................................................................................................................................................26120.1720200000000
...............................................................................................................CTCTCTCTTGC------------------------------------------------------------CTTCC--------------------------------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------ATACCCGATAC-TCAA----AA-TGAGTAT......25200.1530030000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC-TCAA----AA-TGAGTATTGGG..21200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------------------ATACCCGATAC-TCAA----AA-.............20200.1020000000200
......................................................................................................................................................................................................................................................................................................................TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCG....................................................................................................................................................................................................................................................................................................................................................................19120.0810100000000
......................................................................................................................................................................................................................................................................................................................TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCT....................................................................................................................................................................................................................................................................................................................................................................19120.0810100000000
.......................................................................................................................................................................................................................................................................................................................TATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCG....................................................................................................................................................................................................................................................................................................................................................................18120.0810100000000
.......................................................................................................................................................................................................................................................................................................................TATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCA....................................................................................................................................................................................................................................................................................................................................................................18120.0810100000000
.......................................................................................................................................................................................................................................................................................................................TATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCGC---------..........................................................................................................................................................................................................................................................................................................................................................19120.0810100000000
......................................................................................................................................................................................................................................................................................................................TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CC.....................................................................................................................................................................................................................................................................................................................................................................18120.0810100000000
......................................................................................................................................................................................................................................................................................................................TTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------CCGT---------..........................................................................................................................................................................................................................................................................................................................................................20130.0810100000000
droPer2
CTGTTCCGTT--ATGTACCGAATCAAGTGCTGCTGTATCTTACCCT---TTGCACGTTTTTTTTTTTTAAGACCTGATCGTGCGCTGCTTCCG------CCTTTATAAGGGATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTGCTCGCTCCCGTTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------GCGC---------GTT-------------------------------------------------------------------------------------------------------------AACCAGAGGGTGCCCCGGGG------TTTT---------GTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........T--ATGTACCGAATCAAGTGCTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24154.00540540000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------GC.....................................................................................................................................................................................................................................................................................................................................................................26133.00330330000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................25128.00280280000
.........T--ATGTACCGAATCAAGTGCTGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25125.00250250000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................24119.00196121000
.........T--ATGTACCGAATCAAGTGCTGCTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26116.00160160000
...................................................................TAAGACCTGATCGTGCGCTGCTTCCG------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26113.00132110000
........TT--ATGTACCGAATCAAGTGCTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25113.00130130000
...................................................................TAAGACCTGATCGTGCGCTGCTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24111.00110110000
...................................................................TAAGACCTGATCGTGCGCTGCTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.008080000
.........T--ATGTACCGAATCAAGTGCTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.007070000
...................................................................TAAGACCTGATCGTGCGCTGCTTCCG------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.006060000
......................................................................GACCTGATCGTGCGCTGCTTCCG------CCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.006240000
......................................................................GACCTGATCGTGCGCTGCTTCCG------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.006132000
..................................................................................................................TCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.005050000
...................................................................TAAGACCTGATCGTGCGCTGCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005140000
.........T--ATGTACCGAATCAAGTGCTGCTGTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.005230000
............................................................................................................................................................................................................................................................................................................TTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------GC.....................................................................................................................................................................................................................................................................................................................................................................2514.004040000
......................................................................GACCTGATCGTGCGCTGCTTCCG------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.004040000
...................................................................TAAGACCTGATCGTGCGCTGCTTCCG------CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.004030001
.........T--ATGTACCGAATCAAGTGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003030000
............................................................................................................................................................................................................................................................................................................TTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................2413.003030000
.................................................................TTTAAGACCTGATCGTGCGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
.......................................................................................................TATAAGGGATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
............ATGTACCGAATCAAGTGCTGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000
..................................................................................................................TCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
........TT--ATGTACCGAATCAAGTGCTGCTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
.........T--ATGTACCGAATCAAGTGCTGCTGTATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002020000
........TT--ATGTACCGAATCAAGTGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
......................................................................GACCTGATCGTGCGCTGCTTCCG------CCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
............ATGTACCGAATCAAGTGCTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
.................................................................TTTAAGACCTGATCGTGCGCTGCTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
............ATGTACCGAATCAAGTGCTGCTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
..................................................................TTAAGACCTGATCGTGCGCTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
................................................................TTTTAAGACCTGATCGTGCGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................................................................CCTGATCGTGCGCTGCTTCCG------CCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.........T--ATGTACCGAATCAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........TT--ATGTACCGAATCAAGTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................AGTGCTGCTGTATCTTACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................................................................................TCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................TCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................................TTACCCT---TTGCACGTTTTTTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................AAGGGATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................TTAAGACCTGATCGTGCGCTGCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................................................................AAGACCTGATCGTGCGCTGCTTCCG------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................TCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---CTATCCGCGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
................................................................TTTTAAGACCTGATCGTGCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................ATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------------------------------------AACCAGAGGGTGCCCCGG........................................................................................................................................................................................................................1911.001010000
...........................TGCTGCTGTATCTTACCCT---TTGCACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................................TCTTACCCT---TTGCACGTTTTTTTTTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..................................................................TTAAGACCTGATCGTGCGCTGCTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............ATGTACCGAATCAAGTGCTGCTGTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................................................................TAAGACCTGATCGTGCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................TAAGACCTGATCGTGCGCTGCTTCCA------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................................................................................................................................GTTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................TGATCGTGCGCTGCTTCCG------CCTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................TGCGCTGCTTCCG------CCTTTATAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................TCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.........T--ATGTACCGAATCAAGTGCTGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................TCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
......................................................................GACCTGATCGTGCGCTGCTTCCG------CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................AAGACCTGATCGTGCGCTGCTTCCG------CCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..........................................................................TGATCGTGCGCTGCTTCCG------CCTTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...............................................................TTTTTAAGACCTGATCGTGCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---CTATCCGCGCCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........T--ATGTACCGAATCAAGTGCTGCTGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................TTAAGACCTGATCGTGCGCTGCTTCCG------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................................................................AGACCTGATCGTGCGCTGCTTCCG------CCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.......................................................................................................................TGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................TTTGAAAA---CTATCCGCGCCTCTCG---------------------------------------------------------------------------------------------GCGT---------..........................................................................................................................................................................................................................................................................................................................................................2811.001010000
....................................................................AAGACCTGATCGTGCGCTGCTTCCG------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.................................................................TTTAAGACCTGATCGTGCGCTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................................................................TAAGACCTGATCGTGCGCTGCTTCCG------CCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.....................................................................................................TTTATAAGGGATCTCTTTTGC------------------------------------------------------------TGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................................................................AGACCTGATCGTGCGCTGCTTCCG------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
.......................................................................................................................TGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................TTATAAGGGATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................................................................TAAGACCTGATCGTGCGCTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................TAAGGGATCTCTTTTGC------------------------------------------------------------TGTCC--------------------------------------AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................TTAAGACCTGATCGTGCGCTGCTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........T--ATGTACCGAATCAAGTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................TTGC------------------------------------------------------------TGTCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................TCC--------------------------------------AGTTGGCT-------------------CT-------------------------------CTTGCTCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
.............................................................................................................................................................................................................................................................................................CTTGCTCGCTCCCGTTTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
.......................................................................................................................................................................................................................................................................................................CCCGTTTGAAAA---CTATCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
.....................................................................AGACCTGATCGTGCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.252200000
....................................................................AAGACCTGATCGTGCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.252020000
......................................................................GACCTGATCGTGCGCTGCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
.....................................................................AGACCTGATCGTGCGCTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
....................................................................AAGACCTGATCGTGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.131010000
droWil2
CTGTTTCGTG--AT---------TAGTGTTTGGTGCATTTAATTTT---GTTTTCTTT---------------------------------------------------------------TTATTTTTTTCT-CTCTCGTCATT-GCT-TCTGCAGTTGCTCCTCTCATCGC-----C--------CCCATCTT------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCACTTTTGTAAGGCCGCCTCTCAAGGCTCCGTTTATAACTGTTCTTGCACTCTC--------------------------------------------------------TCTT------------------ATACTG---------T-------GCACTCTAGCTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................TCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGC.............................................................................................................................................................................................................................................................................................25203.95790600190
...............................................................................................................................................................................................................................................................................................TGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGC................................................................................................................................................................................................................................................................................................................................25202.7054054000
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----C--------CCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2622.50505000
.............................................................................................................................................................................................................................................T----------GGCTTT-------------------------------GTTGTTCTCTCTGCTTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.8537037000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTC--------------------------------------------------------TCTT------------------ATACTG---------T-------GCACTC.......2311.00101000
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----C--------CCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00202000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACTGTTCTTGCACTCTC--------------------------------------------------------TCTT------------------A...................................2711.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACTGTTCTTGCACTCTC--------------------------------------------------------TCTT------------------A...................................2611.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGCTCCGTTTATAACTGTTCTTG.........................................................................................................................2611.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC--------------------------------------------------------TCTT------------------ATACTG---------T-------GCACTCTAGC...2511.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC--------------------------------------------------------TCTT------------------ATACTG---------T-------GCACTCTAGCTG.2611.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAAGGCTCCGTTTATAACTGT..............................................................................................................................2411.00101000
...TTTCGTG--AT---------TAGTGTTTGGTGCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.0020020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTTATAACTGTTCTTGCACTCTC--------------------------------------------------------..........................................................2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC--------------------------------------------------------TCTT------------------ATACTG---------T-------GCACTCTAGCTG.2711.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAAGGCTCCGTTTATAACTGTTCT...........................................................................................................................2811.00100010
...............................................................................................................................................................................................................................................................................................................TGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGC.............................................................................................................................................................................25200.9519019000
.........................................................................................................................................TCGTCATT-GCT-TCTGCAGTTGCTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.8517017000
.........................................................................................................................................TCGTCATT-GCT-TCTGCAGTTGCTCCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.67202000
......................................................................................................................................................TCTGCAGTTGCTCCTCTCATCGC-----C--------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.67202000
....TTCGTG--AT---------TAGTGTTTGGTGCATTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.6012012000
.TGTTTCGTG--AT---------TAGTGTTTGGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.5511000110
.......................................................................................................................................TCTCGTCATT-GCT-TCTGCAGTTGCTCCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.50101000
......................................................................................................................................................TCTGCAGTTGCTCCTCTCATCGC-----C--------CCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50101000
.........................................................................................................................................................GCAGTTGCTCCTCTCATCGC-----C--------CCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----C--------CCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCACT....................................................................................................................................................................25200.45909000
............................................................................................................................................................................................................................................................TT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------T.......................................................................................................................................................................................................................................................................................................................................24200.40808000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGCGTAATCACTTTTGTAAGGC..........................................................................................................................................................25200.40800080
..................................................................................................................................................................................................................................................................................................TCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAG..............................................................................................................................................................................................................................................................................................26200.40800080
................................................................................................................................................................................................................................CAG----TGCTAGT----------GGCTTT-------------------------------GTTGTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.35702050
...........................................................................................................................................................AGTTGCTCCTCTCATCGC-----C--------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.33101000
............................................................................................................................................TCATT-GCT-TCTGCAGTTGCTCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33101000
.............................................................................................................................................CATT-GCT-TCTGCAGTTGCTCCTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33101000
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----C--------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
....................................................................................................................................................T-TCTGCAGTTGCTCCTCTCATCGC-----C--------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33101000
.............................................................................................................................................CATT-GCT-TCTGCAGTTGCTCCTCTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33101000
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----C--------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100010
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33101000
....................................................................................................................................................T-TCTGCAGTTGCTCCTCTCATCGC-----C--------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33101000
...............................................................................................................................................................................................................................................................................................TGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--G...................................................................................................................................................................................................................................................................................................................................22200.30606000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGCGTAATCACTTTTGTAAGGCC.........................................................................................................................................................26200.30606000
.....TCGTG--AT---------TAGTGTTTGGTGCATTTAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.30606000
.........................................................................................................................................................GCAGTTGCTCCTCTCATCGC-----C--------CCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
........................................................................................................................................................TGCAGTTGCTCCTCTCATCGC-----C--------CCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
.......................................................................................................................................................................................................................................TGCTAGT----------GGCTTT-------------------------------GTTGTTCTCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.25500050
......................................................................................................................................................................TCATCGC-----C--------CCCATCTT------------------------ACCATCAG----TGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.22202000
..................................................................................................................................................................................................................................................................................................TCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------C................................................................................................................................................................................................................................................................................................24200.20403010
....TTCGTG--AT---------TAGTGTTTGGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.20400004
................................................................................................................................................T-GCT-TCTGCAGTTGCTCCTCTCATCGA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCACTTTTGTAAGGCCG........................................................................................................................................................21200.15330000
............................................................................................................................................................................................................................................................TT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GT..................................................................................................................................................................................................................................................................................................................................27200.15303000
.............................................................................................................................................................................................................................................................T-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGC................................................................................................................................................................................................................................................................................................................................28200.15303000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCACTTTTGTAAGGCCGCCTC....................................................................................................................................................24200.15300030
....TTCGTG--AT---------TAGTGTTTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
..................................................................................................................................................................................................T------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------------------------TCCCGCGTAATCACTTTTGTAAGGCCG........................................................................................................................................................29200.15303000
.................................................................................................................................................................................................................................................................................................TTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGC.............................................................................................................................................................................................................................................................................................28200.15303000
............................................................................................................................................................................................................................................................TT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--G...................................................................................................................................................................................................................................................................................................................................26200.15300030
.TGTTTCGTG--AT---------TAGTGTTTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15301020
.................................................................................................................................................................................................TT------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------GTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13101000
................................................................................................................................................T-GCT-TCTGCAGTTGCTCCTCTCATCTT-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13101000
.............................................................................................................................................................................................CATCTT------------------------ACCATCAG----TGCTAGT----------GGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11101000
...............................................................................................................................................................................................TCTT------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.11100010
...............................................................................................................................................................................................TCTT------------------------ACCATCAG----TGCTAGT----------GGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.11101000
...............................................................................................................................................................................................TCTT------------------------ACCATCAG----TGCTAGT----------GGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.11101000
......................................................................................................................................................................TCATCGC-----C--------CCCATCTT------------------------ACCATCAG----TG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11101000
.............................................................................................................................................................................................CATCTT------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.11101000
...............................................................................................................................................................................................TCTT------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11101000
...........................................................................................................................................................................................................................................................................................................TTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------T..................................................................................................................................................................................24200.10202000
..............................................................................................................................................................................................................................................................................................................GTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCC...............................................................................................................................................................................24200.10202000
........................................................................................................................................CTCGTCATT-GCT-TCTGCAGTTGCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.TGTTTCGTG--AT---------TAGTGTTTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
....................................................................................................................................................................................................................................................................................................TCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TC..............................................................................................................................................................................................................28200.10202000
......................................................................................................................................................................................................................................................................................................TCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGC.............................................................................................................................................................................................................................................................................................23200.10202000
.....TCGTG--AT---------TAGTGTTTGGTGCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200020
..........................................................................................................................................................................CGC-----C--------CCCATCTT------------------------ACCATCAG----TGCTAGT----------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28100.10101000
.............................................................................................................................................................................................................................................................................................GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GT..................................................................................................................................................................................................................................................................................................................................25200.10201010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-------------------------TCCCGCGTAATCACTTTTGTAAGGC..........................................................................................................................................................28200.10202000
..................................................................................................................................................................................................T------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------GTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
.............................................................................................................................................................................................................................................T----------GGCTTT-------------------------------GTTGTTCTCTCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10201010
....TTCGTG--AT---------TAGTGTTTGGTGCATTTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200020
.................................................................................................................................................................................................................................................................................................TTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CA...............................................................................................................................................................................................................................................................................................26200.10202000
..................................................................................................................................................................................................T------------------------ACCATCAG----TGCTAGT----------GGCTTT-------------------------------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200020
.................................................................................................................................................................................................................................................................................................TTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--G...................................................................................................................................................................................................................................................................................................................................20200.10200020
............................................................................................................................TTTTTTTCT-CTCTCGTCATT-GCT-TC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGTTCTTGCACTCTC--------------------------------------------------------TCTT------------------....................................24200.10202000
.........................................................................................................................................TCGTCATT-GCT-TCTGCAGTTGCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCACTTTTGTAAGGCCGCCTCTCAA................................................................................................................................................28200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGTTCTTGCACTCTC--------------------------------------------------------TC........................................................21200.05101000
.....................................................................................................................................................................................................................................................................................................CTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------................................................................................................................................................................................................................25200.05101000
...................................................TTTCTTT---------------------------------------------------------------TTATTTTTTTCT-CTCTCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...........................................................................................................................ATTTTTTTCT-CTCTCGTCATT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................................................................TGCTAGT----------GGCTTT-------------------------------GTTGTTCTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCACT....................................................................................................................................................................28200.05100010
CTGTTTCGTG--AT---------TAGTGTTTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..GTTTCGTG--AT---------TAGTGTTTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
..........................................................................................................................TATTTTTTTCT-CTCTCGTCATT-GCT-TC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.....TCGTG--AT---------TAGTGTTTGGTGCATTTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100
...............................................................................................................................................................................................................................................................................................................TGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------T..................................................................................................................................................................................20200.05101000
.........................................................................................................................TTATTTTTTTCT-CTCTCGTCATT-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.............................................................................................................................TTTTTTCT-CTCTCGTCATT-GCT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATC.......................................................................................................................................................................22200.05100010
..................................................................................................................................................................................................................................................................................................TCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAT..............................................................................................................................................................................................................................................................................................26200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGTTCTTGCACTCTC--------------------------------------------------------T.........................................................21200.05101000
............................................................................................................................................................................................................................................................TT-------------------------------GTTGTTCTCTCTGCTTTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.........................................................................................................................................................................................................................................................................................................GCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------T..................................................................................................................................................................................26200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCACTTTTG................................................................................................................................................................27200.05101000
......CGTG--AT---------TAGTGTTTGGTGCATTTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTTTGTAAGGCCGCC......................................................................................................................................................18200.05100001
..........................................................................................................................................................................................................................................................................................................CTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------...................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................CAG----TGCTAGT----------GGCTTT-------------------------------GTTGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................TGCTAGT----------GGCTTT-------------------------------GTTGTTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................CTTT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................25200.05101000
...................................................................................................................................................................................................................................................................................................CTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGC.............................................................................................................................................................................................................................................................................................26200.05101000
..................................................................................................................................TCT-CTCTCGTCATT-GCT-TCTGCAGTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
........................................................................................................................................CTCGTCATT-GCT-TCTGCAGTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................TTT---------------------------------------------------------------TTATTTTTTTCT-CTCTCGTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..............................................................................................................................TTTTTCT-CTCTCGTCATT-GCT-TCTGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
.............................................................................................................................................................................................................................................T----------GGCTTT-------------------------------GTTGTTCTCTCTGCTTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCA......................................................................................................................................................................29200.05101000
........................................................TT---------------------------------------------------------------TTATTTTTTTCT-CTCTCGTCATT-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...............................................................................................................................TTTTCT-CTCTCGTCATT-GCT-TCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..GTTTCGTG--AT---------TAGTGTTTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCACTT...................................................................................................................................................................26200.05100001
....................................................TTCTTT---------------------------------------------------------------TTATTTTTTTCT-CTCTCGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCA......................................................................................................................................................................26200.05101000
.TGTTTCGTG--AT---------TAGTGTTTGGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...TTTCGTG--AT---------TAGTGTTTGGTGCATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.........................................................................................................................TTATTTTTTTCT-CTCTCGTCATT-GCT-T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
..........................................................................................................................TATTTTTTTCT-CTCTCGTCATT-GCT-T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.......................................................................................................................................................................................................................................TGCTAGT----------GGCTTT-------------------------------GTTGTTCTCTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACTGTTCTTGCACTCTC--------------------------------------------------------T.........................................................23200.05100010
...........................................................................................................................................................................................................................................................................................................TTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TC.................................................................................................................................................................................25200.05101000
..............................................................................................................................................................................................................................................................................................................GTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCG............................................................................................................................................................................27200.05101000
.................................................................................................................................................................................................................................................................................................TTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGCT------------------------------C................................................................................................................................................................................................................................................................................................25200.05101000
..........................................................................................................................TATTTTTTTCT-CTCTCGTCATT-GCT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................................TT-------------------------------GTTGTTCTCTCTGCTTTGTGC------------------------------------------------------------------------------------------------------------------------------------------------TT--GTGC................................................................................................................................................................................................................................................................................................................................29200.05101000
.............................................................................................................................TTTTTTCT-CTCTCGTCATT-GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............................................................................................................................................................................................................................................T----------GGCTTT-------------------------------GTTGTTCTCTCTGCTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.......GTG--AT---------TAGTGTTTGGTGCATTTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
....................................................TTCTTT---------------------------------------------------------------TTATTTTTTTCT-CTCTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........TG--AT---------TAGTGTTTGGTGCATTTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT------------------------------CAGCT----------------------------------------------------------------------------TCTC-------------------------TCCCGCGTAATCAC.....................................................................................................................................................................26200.05101000
.............................................................................................................................................................................................................................CATCAG----TGCTAGT----------GGCTTT-------------------------------GTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
droVir3
CTGCTCTTGT--T-----------------------------------------------------------------------------GCT----------------------------GT-------------------------T-CTTGTT-----------------GCTGCT--------------------------------------------------------GCCTTTTGC---TTT--------------------------------------------------------------------------------TACCC-TGAAATGTTATCCACTTTACATGGACTCTGGTCTGATGCTGTTTCGCTGGATAGCGCTTTCTCGATT-------------------------------------------------------------------------------------------------------------------------TCTGCTG---------------------------------------------------------------------------------------------------------------------------TTGCTTTCATTTTTATTTACTGC----------AGTTCTGTTTTTTTTTTTTT-----TTTTTGCTTTTT------------------ATACCCTATAC-TCA---------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GTCTTTTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------GC----------------------------------------------------CGA------A--------------------------------------------------------CTCTCGAGCTTTCGTGATTAACTC---TTCCTTGCACCGCTGGTAGATCCACCCGACGCT----ATTT----ATTTGTTT-----------------C--TCTCC----TTTTTTATACCCTGAAC-CCATTGAAAATGGGAAATCAGGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCACCGC...............................................................................................................26310.333113100170
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCCACCC.................................................................................................26201.402815000130
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCACCG................................................................................................................2531.334300010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCCACC..................................................................................................25201.00200000200
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCACC.................................................................................................................2431.003100020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTGATTAACTC---TTCCTTGCACCGC...............................................................................................................2821.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCCACCCGA...............................................................................................28200.8016700090
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCACCGCTG.............................................................................................................2830.672200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCCACCCG................................................................................................27200.6012700050
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCTTTCGTGATTAACTC---TTCCT.......................................................................................................................2620.501000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTGATTAACTC---TTCCTTGCAC..................................................................................................................2520.501000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAG----------------------------------GC----------------------------------------------------CGA------A--------------------------------------------------------CTCTCGAGCTTTCG.........................................................................................................................................2520.501100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAG----------------------------------GC----------------------------------------------------CGA------A--------------------------------------------------------CTCTCGAGCTTT...........................................................................................................................................2320.501000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTGATTAACTC---TTCCTTGCACC.................................................................................................................2620.501000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAGATCCACCCGACGCT----ATTT----ATC............................................................................2720.501000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGATTAACTC---TTCCTTGCA...................................................................................................................2320.501100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAGCTTTCGTGATTAACTC---TTCCT.......................................................................................................................2820.501100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGATTAACTC---TTCCTTGCACCGC...............................................................................................................2720.501100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------C--TCTCC----TTTTTTATACCCTGAAC-CCAT....................2920.501100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTGATTAACTC---TTCCTTGCA...................................................................................................................2420.501100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT----ATTTGTTT-----------------C--TCTCC----TTTTTTATACCC..............................2920.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCCACCCGAC..............................................................................................29200.357700000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCA...................................................................................................................2230.331100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGATTAACTC---TTCCTTGCACC.................................................................................................................2330.331100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCACCGCC..............................................................................................................2730.331000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGATTAACTC---TTCCTTGCACCGCTG.............................................................................................................2730.331000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACTC---TTCCTTGCACCGCTGG............................................................................................................2730.331000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGATTAACTC---TTCCTTGCACCGC...............................................................................................................2530.331100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCAC..................................................................................................................2330.331000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAACTC---TTCCTTGCACCGCTGGTA..........................................................................................................2730.331000010
.....TTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.333200010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGATTAACTC---TTCCTTGCACCGCTGG............................................................................................................2930.331000010
............................................................................................................................T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------GC----------------------------------------------------C........................................................................................................................................................................................................................26180.224100030
....TTTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.222200000
.........T--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................................2690.222200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---TTCCTTGCACCGCTGGTAGATCCACCC.................................................................................................2950.201000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT----ATTTGTTT-----------------C--TCTCC----TT........................................1950.201100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCC----TTTTTTATACCCTGAAC-........................2160.171100000
...................................................................................................TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------GC----------------------------------------------------C........................................................................................................................................................................................................................29170.122000020
.....TTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.111100000
............................................................................................................................T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------GC----------------------------------------------------CG.......................................................................................................................................................................................................................27180.112200000
...TTTTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111000010
.........T--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATC....................................................................................................................................................................................................................................................................................................................2890.111100000
............C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................2490.111100000
........CT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................2690.111000010
..CTTTTCCT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.101000010
........CT--C-----------------------------------------------------------------------------AGA------TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.091100000
..........................................................................................................................................TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------GC----------------------------------------------------CGA------A--------------------------------------------------------CTCTCGAGC..............................................................................................................................................26120.081100000
....................................................................................................CC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATCCAG----------------------------------...............................................................................................................................................................................................................................................................................25190.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGCTGGTAGATCCACCCGACG.............................................................................................24200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGCTGGTAGATCCACCCGAC..............................................................................................23200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCTGGTAGATCCACCC.................................................................................................19200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCGCTGGTAGATCCACCCGACG.............................................................................................26200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCGCTGGTAGATCCACCCGACGC............................................................................................27200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGCACCGCTGGTAGATCCACCCG................................................................................................26200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCC.....................................................................................................22200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCACCGCTGGTAGATCCACCCGT...............................................................................................28200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGCACCGCTGGTAGATCCACCCGA...............................................................................................27200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCGCTGGTAGATCCACCCGACGCT----.......................................................................................28200.051000010
...................................................................................................TCC----------------------T-CTACTCGGCCC-TCA------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------ATC....................................................................................................................................................................................................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCACCGCTGGTAGATCCACC..................................................................................................23200.051000010
droGri2
GCTCTCTCTC--T------------------------------------------------------------------------------------------------------------CTCTCTCTTTCGCTCT-CTTTACTTGCTCTCAGCAGTTGGATGA----------------------------------------TCCTTCGTTATGTTACACACAG----CATTAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAA----------------------------------CG----------------------------------------------------GGA------ATTT---------GTTAGCTCTTGCT---TT-------------------------------------------------------A-------------------CACCTGA-------------------------------TACCATTCTT------------------ATACACTGTAC-CAATTAAAAATGAGTAAAAATGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CGCCTGACCT--C-----------------------------------------------------------------------------CTCCTCGATCAT----------------------T-TTTTTCGGTCC-TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGTTTTTCTGGGG-----CCATATTCATGGCCCTCGCTCCCA----------------------CGGTTCCGGGTTCTCTTGCCTGTTCTCTTCCTGGGGATGGGGTGTCAGTGGCGCG---------------------------TCCACCG-----------------------------------------------------CTTTCTTCCT-----------------AGC------CCACTGAAC-------------------------CT-------------------------------------------------------------------------------------TTTT----TTTTGGTT-----------------T--CCCCT----CCTTTTATACC------CTA---------------GCAGAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGTTTTTCTGGGG-----CCATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
GAGCTCTATA--T------------------------------------------------------------------------------------------------------------T---------TGC-----------------------------------TCAC-----C--------TCTATTTT------------------------G---------------------------------------------------------------------------------TTAAAA---AAATTCACACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC------------------------------------------------ATTCCCTGCCCAAGCAGGGAGTGGCGTGGAG------CT-----------------------------------------------------------------------------------------------------------------------TTAT----ATTTGCTC-----------------ACCTCTAT----TTTTTTATACC------CTTGC---------------AGAGGSizeHit CountTotal NormTotal
No Reads
droKik1
CGGTGTGCATTCG-----------------------------------------------------------------------------TAC----------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCACACATGAGAAATATGTTAATTGCGACATTTGCCGATTTTGCTGTGG-----TCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTC--------------------------------------------------------------------------------------------------------------------ATAAGCTGC---------GAGTTTTGTTTTTC-----TCGGTTTTG---------------TTTGCTATTTTTTATACC------CTTGC---------------A--GGSizeHit CountTotal NormTotal
No Reads
droFic1
CTCGCCGCCA--T-----------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------ATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTCTC----------------------------------AG-GGACTTT----------------ATTCTCTTTCC----------------------------------------------------------AGTTT--------------------------------------------------------------------------------------------------TC--------CGC-----------TCTGCC-ATATTTATAAC------CTTGC-------AGAGCAAAG--GGSizeHit CountTotal NormTotal
No Reads
droEle1
TTTCGTTCGT--A-----------------------------------------------------------------------------TTT----------------------------C---------------------------------------------------------TGTTTGCTCTTTTGTTTTTAACTGAATTT---------------------------------------------------------------------------------------------TAAATTGTATTAGCCGGGGCGCTCG---------------------------------------------------------------------------------------------C----------------------------------------------CATCGGCATCAATCA-----------------------------------------------------TTTTTTGCCA-----------------AAG------CCTT-------------------------TTTGGCTT--------------------------------------------------------------------------------------------------TT----------------T---ACTTT----GTTTTTATACC------CTTGC-------------AAGGGGASizeHit CountTotal NormTotal
No Reads
droRho1
GGCCATCTCT--C-----------------------------------------------------------------------------T------------------------------C------------------------------------------------------------GGTCT--------------------------------------AGTGTGCC-------------------CC-------------------------------TACGCGCGCGATCGTTGG--------------------------------------------------------------------------------------------------------------------------------------------CGCGCGCGC--GTTCTTAGTTTGAATCGGAATTAAA---------------------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------GCTTTTTC-----GTTTAACTTTTT------------------ATACCCGTTAC-TCGT-------AGAGTAAAAGGGTSizeHit CountTotal NormTotal
No Reads
droBia1
CTCTCTTGCT--T-----------------------------------------------------------------------------TAT----------------------------T---------------------------------------------------------TA-------------------CATGG----------------------------------------------------------------------------------------------TGTGAAAG---TTGTTAGTGC---------------------------------------------------------------------------------------------------------------------------CGCACAAGCCACGCTC-------AGTCGAT-----------------------------------------------------------------------------------------------------AGAATATTTTTTCTCTCGAGTTCTCTT-------------------------------------------------------ACGTTTATTTTCGTTTATT-TTCGC------GGTCTC----------------------------------GCGCT----CTTATTATTCC------CTTGC-------------AGAGGGTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTTACAAA--C-----------------------------------------------------------------------------TAC----------------------------T-----------------------------------------------------------------------------------------------------------------GTCACTTGTAAGGGTCTTCGGTACATTCTTCACTTCCGGAGTCTTGGTGAGCTGCCTTTTCGCGCATGGAGA---TTTTTCACGCATCTCC---------------------------------------------------------------------------------------------ATGC---------GTG---GAGGCTCTGTAGGCTCCACCT------------------------------------------------------------------------------------------------------GGC------CAATGGGAT----------------------------------------------------------------------------------------------------------------CTGA----ATTTGGAA-----------------A--TATAT----TTTTTTATACC------CTTGC---------------AGAGCSizeHit CountTotal NormTotal
No Reads
droEug1
CTTCGTCGTT--TAGTCCCAAAAGAATTTATATTGAAATTTAATCGATCTCGGACATTTTTGTTTTTAAGTAT-------------------------------------------------------------CTC-TCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTTTCGTCGCAT-----TCAAATCCATTAAGCTCGCGTAGT----------------------CGTTTTCGGTTTTTTCTGTCCCTATCGTTATCGAAAACAA----------------------ATTTATGCAACGGTTATACTTGCTT----------------TCGAT----------------------------------------------------------------GCACTC------------------------------------------------------------------------------------------------------------------------------------------------TTTAGTTTTT------------------ATACCCGTAAC-TCAA-------GGAGTAAAAGGGTSizeHit CountTotal NormTotal
No Reads
dm3
TCGCTCACGC--G-----------------------------------------------------------------------------TTC----------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATCAAAG---CAAACCATGCTTTTCG---------------------------------------------------------------------------------------------ATAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----TTTA---------CTGCGA--------------------------------------------------------------------------------------------------------------TTTCTTTT-----TAGTATTTATAC------------------ATACT--TGAT-ACTC-------TGACTTATAGGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
TCGCTCACGC--G-----------------------------------------------------------------------------TTC----------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATCAAAG---CAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----TTTA---------C..................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------CTGCGA--------------------------------------------------------------------------------------------------------------TTTCTTTT-----TAGTATTTATAC------------------....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----TTTA---------CTGC...............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAC------------------ATACT--TGAT-ACTC-------TGACTTA......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCG---------------------------------------------------------------------------------------------ATAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGA--------------------------------------------------------------------------------------------------------------TTTCTTTT-----TAGTATTTATAC------------------A...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGCTCACGC--G-----------------------------------------------------------------------------TTC----------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCACGC--G-----------------------------------------------------------------------------TTC----------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATCAAAG---CAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----TT..............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC------------------ATACT--TGAT-ACTC-------TGACTTATAGGG.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----TTTA---------CT.................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................TTCG---------------------------------------------------------------------------------------------ATAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGAAAAG-------------------------------G-----A...............................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCTAACTGAAAAG-------------------------------G-----TTTA---------CTGCGA--------------------------------------------------------------------------------------------------------------...............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTCG---------------------------------------------------------------------------------------------ATAT---------TT---------------------------------------------------------------------------------ATATAGCTAACTGA.........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGAAAAG-------------------------------G-----TTTA---------CTGCGA--------------------------------------------------------------------------------------------------------------TTT............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAG-------------------------------G-----TTTA---------CTGCGA--------------------------------------------------------------------------------------------------------------TTTCTTTT-----TAGT..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCTTTTTTAT--C-----------------------------------------------------------------------------TTC----------------------------TTCT-TTTTTCAATCC-CTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTCCGCCTTTCGACTGCTGTGCCAGATCTTTATAACTCTCAGCTATA-------------------------------GCACAT------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTTT------------------ATACCCGTTAC-TCGT-------TGACTAAAAGGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCAGATCTTTATAACTC..............................................................................................................................................................................................................................................................2113.00300300000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCGTTAC-TCGT-------TGACTAAAAGGGC2712.00200000010001000000
.............................................................................................................................................T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTCCGCCTTTCGACTGC...................................................................................................................................................................................................................................................................................2412.00200200000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGCCAGATCTTTATAACTC..............................................................................................................................................................................................................................................................2412.00200200000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCGTTAC-TCGT-------TGACTAA......2011.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAACTCTCAGCTATA-------------------------------GCACAT------------------------------------------------------------------------------------------------------------------------------------------------TT..............................................................2711.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCAGATCTTTATAACTCTCAG..........................................................................................................................................................................................................................................................2511.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTTT------------------ATACCCGTTAC-TCGT-------.............2611.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCAGATCTTTATAACTCTCAGC.........................................................................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCAGATCTTTATAACTCTCAGCTA.......................................................................................................................................................................................................................................................2811.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCTTTCGACTGCTGTGCCAGA..........................................................................................................................................................................................................................................................................2511.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGCCAGATCTTTATAACA...............................................................................................................................................................................................................................................................2311.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTT------------------ATACCCGTTAC-TCG.....................19200.05100000000001000000
droSec2
TCTTTTTTAT--C-----------------------------------------------------------------------------TTC----------------------------TTCTTTTTTTCAATCC-CTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTTCCGCCTTTCGACTGCTGTGCCACAACTTTATAACTCTCAGCTATA-------------------------------GCACAT------------------------------------------------------------------------------------------------------------------------------------------------TTTAATTTTT------------------ATACCCGTTAC-TCGT-------TGACTAAAAGGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTGGGCGCCT--C-----------------------------------------------------------------------------TGT----------------------------C---------------------------------------------------------TGGCTGCC--------------------------------------AGTTGGCT--GTCATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCACTTCGGTTTCAGTTTC-------------------------------------------GACT----TCCACCAATTTTCTCCGGCT----------------------------------------------------------------------------CCTC-------------------------TCCCACT----------------------------------------------------------------------------------------------------T-----TCTTCATTTTTT------------------ATACCCGTTAC-TCGT-------AGAGTAAAAGGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTT------------------ATACCCGTTAC-TCGT-------.............22200.05100001000000
droEre2
TTTTTTTCAA--T-----------------------------------------------------------------------------ACC----------------------------AT-------------------------T-TTCCGT-----------------TTTACTTC-------------------CCTCT------------------------------------TGCGGCTGT--------------------------------------------------------------------------------TTCTCCTGAAT-----TCCACTCCCCGAAAATCCTGTTGCTATGCTGCTATTC---------------TGATCCTTACTGCCTTTGCTGCTTCACTTGCCTC----------------------TTTCTTGCTCGGGCTCTGTTTTACT----------------TCCGT----------------------------------------------------------------AATCTC------------------------------------------------------------------------------------------------------------------------------------------------TTACATAATT------------------GTACCCGTTAC-ACGT-------AGAGTAAAAGGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................TCTCCTGAAT-----TCCACTCCCCGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000

Generated: 05/18/2015 at 01:26 AM