ID:

dps_1766

 Coordinate:

Unknown_group_122:2375-2525 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.5 -2.2 -1.7

Flybase annnotation

CDS [Dpse\GA27634-cds]; exon [dpse_GLEANR_6617:1]; intron [Dpse\GA27634-in]

No Repeatable elements found

mature
  1. Unknown_group_129:24111-24133 -
  2. Unknown_group_31:1019-1041 +
  3. Unknown_group_35:15139-15161 +
  4. Unknown_group_27:19224-19246 -
  5. dps_1766  Unknown_group_122:2376-2398 +
  6. Unknown_group_123:5827-5849 +
  7. Unknown_group_136:10720-10742 +
  8. Unknown_singleton_2019:2269-2291 -
  9. Unknown_singleton_2020:94-116 +
  10. Unknown_singleton_2020:20092-20114 +
  11. XL_group1a:4215960-4215982 -
  12. Unknown_singleton_3388:371-393 +
  13. Unknown_singleton_3084:279-301 +
  14. Unknown_singleton_2015:513-535 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAGGGAGATCATCCCCGCTTCGGACAACGACACAACAAGCGACGACGAGGTACAGCTCCTAGGAGAGGACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
**************************************************.......((((.....))))...................................................................................................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 V112
male body		 SRR902011
testis
 M062
head
.............................GACACAACAAGCGACGACGAGGT....................................................................................................................................................................................................... 23 0 4 34.50 138 129 2 3 3 1 0 0
.............................GACACAACAAGCGACGACGAGG........................................................................................................................................................................................................ 22 0 4 32.25 129 127 0 1 1 0 0 0
.....................CGGACAACGACACAACAAGCGACGACG........................................................................................................................................................................................................... 27 0 4 13.25 53 1 52 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTA...................................................................................................................................................................................................... 24 0 4 11.75 47 44 0 0 2 0 0 1
.....................CGGACAACGACACAACAAGCGACGA............................................................................................................................................................................................................. 25 0 4 7.50 30 14 15 0 0 0 1 0
............................CGACACAACAAGCGACGACGAGG........................................................................................................................................................................................................ 23 0 4 7.50 30 29 0 0 1 0 0 0
.............................GACACAACAAGCGACGACGAG......................................................................................................................................................................................................... 21 0 4 7.25 29 28 0 0 0 1 0 0
.............................GACACAACAAGCGACGACGAGGTAC..................................................................................................................................................................................................... 25 0 4 7.00 28 24 1 2 0 1 0 0
.............................GACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 20 0 4 6.50 26 21 0 1 4 0 0 0
.....................CGGACAACGACACAACAAGCGACG.............................................................................................................................................................................................................. 24 0 4 4.00 16 8 8 0 0 0 0 0
.....................CGGACAACGACACAACAAGCGAC............................................................................................................................................................................................................... 23 0 4 3.75 15 4 9 2 0 0 0 0
..............................ACACAACAAGCGACGACGAGG........................................................................................................................................................................................................ 21 0 4 3.50 14 13 0 1 0 0 0 0
............................CGACACAACAAGCGACGACGAG......................................................................................................................................................................................................... 22 0 4 2.75 11 11 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTACAG................................................................................................................................................................................................... 27 0 4 2.75 11 11 0 0 0 0 0 0
.............................GACACAACAAGCGACGACG........................................................................................................................................................................................................... 19 0 4 2.50 10 7 0 0 3 0 0 0
.............................GACACAACAAGCGACGACGAGGTAA..................................................................................................................................................................................................... 25 1 4 2.00 8 7 0 0 1 0 0 0
..............................ACACAACAAGCGACGACGAGGT....................................................................................................................................................................................................... 22 0 4 2.00 8 8 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTACAGC.................................................................................................................................................................................................. 28 0 4 1.75 7 6 0 1 0 0 0 0
.....................CGGACAACGACACAACAAGCGA................................................................................................................................................................................................................ 22 0 4 1.75 7 2 5 0 0 0 0 0
.........................CAACGACACAACAAGCGACGACG........................................................................................................................................................................................................... 23 0 4 1.50 6 0 5 0 0 1 0 0
.............................GACACAACAAGCGACGACGAGA........................................................................................................................................................................................................ 22 1 4 1.50 6 6 0 0 0 0 0 0
.....................CGGACAACGACACAACAAGCGACGAC............................................................................................................................................................................................................ 26 0 4 1.50 6 0 6 0 0 0 0 0
............................CGACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 21 0 4 1.25 5 4 1 0 0 0 0 0
............................CGACACAACAAGCGACGACGAGGT....................................................................................................................................................................................................... 24 0 4 1.25 5 5 0 0 0 0 0 0
..............................ACACAACAAGCGACGACGAGGTA...................................................................................................................................................................................................... 23 0 4 1.00 4 4 0 0 0 0 0 0
............................CGACACAACAAGCGACGAC............................................................................................................................................................................................................ 19 0 4 0.75 3 3 0 0 0 0 0 0
.........................CAACGACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 24 0 4 0.75 3 2 1 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTAAA.................................................................................................................................................................................................... 26 1 4 0.75 3 3 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGC....................................................................................................................................................................................................... 23 1 4 0.75 3 1 0 2 0 0 0 0
.........................CAACGACACAACAAGCGACGACGAGG........................................................................................................................................................................................................ 26 0 4 0.75 3 3 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGT........................................................................................................................................................................................................ 22 1 4 0.75 3 3 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTACA.................................................................................................................................................................................................... 26 0 4 0.75 3 3 0 0 0 0 0 0
....................TCGGACAACGACACAACAAGCGACGA............................................................................................................................................................................................................. 26 0 4 0.75 3 2 1 0 0 0 0 0
.........................CAACGACACAACAAGCGACGAC............................................................................................................................................................................................................ 22 0 4 0.75 3 3 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGA....................................................................................................................................................................................................... 23 1 4 0.75 3 3 0 0 0 0 0 0
............................CGACACAACAAGCGACGACGAGGTA...................................................................................................................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0 0
...................................................TACAGCTCCTAGGAGAGGACGAC................................................................................................................................................................................. 23 0 14 0.57 8 4 0 4 0 0 0 0
......................GGACAACGACACAACAAGCGACGA............................................................................................................................................................................................................. 24 0 4 0.50 2 2 0 0 0 0 0 0
........................ACAACGACACAACAAGCGACGACG........................................................................................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0 0
.....................CGGACAACGACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 28 0 4 0.50 2 0 2 0 0 0 0 0
..............................ACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 19 0 4 0.50 2 2 0 0 0 0 0 0
.............................GACTCAACAAGCGACGACGAGGT....................................................................................................................................................................................................... 23 1 4 0.50 2 1 0 1 0 0 0 0
..............................ACACAACAAGCGACGACGAGGTAC..................................................................................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0 0
..........................AACGACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0
..............................ACACAACAAGCGACGACGAGGTAA..................................................................................................................................................................................................... 24 1 4 0.50 2 2 0 0 0 0 0 0
...................................................TACAGCTCCTAGGAGAGGACG................................................................................................................................................................................... 21 0 14 0.43 6 6 0 0 0 0 0 0
.............................GACACAACAAGCGACGACA........................................................................................................................................................................................................... 19 1 5 0.40 2 2 0 0 0 0 0 0
.............................GACACAACAAGCGACGAC............................................................................................................................................................................................................ 18 0 4 0.25 1 1 0 0 0 0 0 0
......................................AGCGACGACGAGGTACAGC.................................................................................................................................................................................................. 19 0 4 0.25 1 1 0 0 0 0 0 0
.............................GAAACAACAAGCGACGACGA.......................................................................................................................................................................................................... 20 1 4 0.25 1 0 0 1 0 0 0 0
..........................AACGACACAACAAGCGACGACGAG......................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0
.......................GACAACGACACAACAAGCGACGACGA.......................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTACAA................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0
...............................CACAACAAGCGACGACGAGGTACAGC.................................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0
.............................GACACAACAAGCGACCACGAGG........................................................................................................................................................................................................ 22 1 4 0.25 1 1 0 0 0 0 0 0
...............................CACAACAAGCGACGACGAG......................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0
....................TCGGACAACGACACAACAAGCGACGAC............................................................................................................................................................................................................ 27 0 4 0.25 1 0 1 0 0 0 0 0
........................................CGACGACGAGGTACAGCTCC............................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0
.............................GGCACAACAAGCGACGACGAG......................................................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0 0
............................CGACACAACAAGCGACGACGAGGTAC..................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
.......................GACAACGACACAACAAGCGACG.............................................................................................................................................................................................................. 22 0 4 0.25 1 0 0 0 0 1 0 0
.....................CGAACAACGACACAACAAGCGACG.............................................................................................................................................................................................................. 24 1 4 0.25 1 0 1 0 0 0 0 0
..................................AACAAGCGACGACGAGGTAC..................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0
....................TCGGACAACGACACAACAAGCGACG.............................................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0
......................GGACAACGACACAACAAGCGAC............................................................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0 0
...........................ACGACACAACAAGCGACGACG........................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
....................TCGGACAACGACACAACAAGCGACGACG........................................................................................................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 1 0
..................................AACAAGCGACGACGAGGTA...................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTT...................................................................................................................................................................................................... 24 1 4 0.25 1 0 0 0 1 0 0 0
...............................GACAACAAGCAACGACGAGGT....................................................................................................................................................................................................... 21 2 4 0.25 1 0 0 1 0 0 0 0
........................ACAACGACACAACAAGCGACG.............................................................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0
.......................GACAACGACACAACAAGCGACGA............................................................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0
.......................GACAACGACACAACAAGCGACGACG........................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
............................CTACACAACAAGCGACGAC............................................................................................................................................................................................................ 19 1 4 0.25 1 0 0 1 0 0 0 0
.....................CGGACAACGACACAACAAGCG................................................................................................................................................................................................................. 21 0 4 0.25 1 0 1 0 0 0 0 0
.............................GACACAACAAGCGACGACGAGGTACAGT.................................................................................................................................................................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0
.............................GACACAACAAGCGACGAACAGGTAG..................................................................................................................................................................................................... 25 3 4 0.25 1 0 0 0 1 0 0 0
.....................CGGACAACGACACAACAAGCGACGACGT.......................................................................................................................................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0
.............................................ACGAGGTACAGCTCCTAGAAGAGGACG................................................................................................................................................................................... 27 1 13 0.23 3 0 3 0 0 0 0 0
.................GCTTCGGACAACGGCATCAC...................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0
..............................ACACAACAAGCGTTGACGACG........................................................................................................................................................................................................ 21 3 7 0.14 1 0 0 0 1 0 0 0
.............................GACACAACAAGCGGCGACGAGG........................................................................................................................................................................................................ 22 1 7 0.14 1 1 0 0 0 0 0 0
....................................................ACAGCTCCTAGGAGAGGACGA.................................................................................................................................................................................. 21 0 16 0.13 2 2 0 0 0 0 0 0
.................................................GGTACAGCTCCTAGGAGAGGACG................................................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0 0 0 0
..................................................GTACAGCTCCTAGGAGAGGAC.................................................................................................................................................................................... 21 0 14 0.07 1 0 0 1 0 0 0 0
...........................................CGACGAGGTACAGCTCCTAGGAG......................................................................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0 0
..................CTTCGGACAACGGCATCAC...................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0
...................................................TACAGCTCCTAGGAGAGGAAAAA................................................................................................................................................................................. 23 3 17 0.06 1 1 0 0 0 0 0 0

Anti-sense strand reads

TCTCCCTCTAGTAGGGGCGAAGCCTGTTGCTGTGTTGTTCGCTGCTGCTCCATGTCGAGGATCCTCTCCTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
**************************************************.......((((.....))))...................................................................................................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 GSM343916
embryo
 M059
embryo
 V112
male body
...............GGCGAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 24 0 1 16.00 16 6 8 1 0 0 1
..................AAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 21 1 1 9.00 9 9 0 0 0 0 0
.......................................CGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 23 0 4 7.50 30 12 16 2 0 0 0
..............GGGCGAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 25 0 1 5.00 5 4 0 0 0 1 0
.............GGGGCGAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0 0
.................CGAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 22 0 1 4.00 4 4 0 0 0 0 0
....................AGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 19 0 4 3.50 14 13 0 0 1 0 0
.................CGAAGCCTGTTGCTGTGTTGT..................................................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0
...................AAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0
......................................TCGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 24 0 4 2.25 9 8 0 0 0 1 0
...................................TGTTCGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 27 0 4 1.75 7 1 6 0 0 0 0
.....................................TTCGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 25 0 4 1.50 6 4 1 0 1 0 0
........................................GCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 22 0 4 1.50 6 6 0 0 0 0 0
.........................................CTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 21 0 4 1.50 6 6 0 0 0 0 0
..........................................TGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 20 0 4 1.50 6 2 4 0 0 0 0
..........................................TGCTGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 25 0 4 1.25 5 5 0 0 0 0 0
................................TGTTGTTCGCTGCTGCTCCATGT.................................................................................................................................................................................................... 23 0 4 1.25 5 2 3 0 0 0 0
............AGGGGCGAAGCCTGTTGCTGTGTTGT..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..................GAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
................GCGAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...................ATGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................GTTCGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 26 0 4 1.00 4 4 0 0 0 0 0
................AAAAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
.........AGTAGGGGCGAAGCCTGTTGCT............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
..........CTAGGGGCGAAGCCTGTTGCTGTGT........................................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
...................AAGCCTGTTGCTGTGTTGT..................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
............AGGGGCGAAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..............GGGCGAAGCCTGTTGCTGTGTTGT..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...............................GTGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 22 0 4 1.00 4 4 0 0 0 0 0
...................AAGCCTGCTGCTGTGTTGTT.................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.............................CTGTGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 24 0 4 0.75 3 2 0 0 1 0 0
............................GCTGTGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0
.................................GTTGTTCGCTGCTGCTCCATGT.................................................................................................................................................................................................... 22 0 4 0.75 3 3 0 0 0 0 0
..........................................TGCTGCTCCATGTCGAGGATCCTC......................................................................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0
..............................TGTGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0
.......................................CGCTGCTGCTCCATGTCGAGGA.............................................................................................................................................................................................. 22 0 4 0.50 2 0 2 0 0 0 0
.......................................TGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 23 1 4 0.50 2 1 0 1 0 0 0
....................AGCCTGTTGCTGTGTTGT..................................................................................................................................................................................................................... 18 0 4 0.50 2 2 0 0 0 0 0
.........................................CTGCTGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 26 0 4 0.50 2 1 1 0 0 0 0
...................................TGTTCGCTGCTGCTCCATGTCGAGG............................................................................................................................................................................................... 25 0 4 0.50 2 0 2 0 0 0 0
.......................................AGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 23 1 4 0.50 2 2 0 0 0 0 0
....................................................TGTCGAGGATCCTCTC....................................................................................................................................................................................... 16 0 20 0.45 9 0 9 0 0 0 0
...........................................GCTGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 24 0 15 0.40 6 6 0 0 0 0 0
............................................CTGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 23 0 15 0.27 4 3 0 0 0 1 0
..............................................GCTCCATGTCGAGGATCCTCTCCT..................................................................................................................................................................................... 24 0 15 0.27 4 0 4 0 0 0 0
.........................................ATGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 21 1 4 0.25 1 0 0 0 1 0 0
.......................................CGCTGCTGCTCCATGTCGAGGATCCT.......................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
.....................GCCTGTTGCTGTGTTGTTCGC................................................................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0
....................................GTTCGCTGCTGCTCCATGTCGAGGA.............................................................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0
.................................TTTGTTCGCTGCTGCTCCATGT.................................................................................................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0
.......................................CGCTGCTGCTCCATGTCGAG................................................................................................................................................................................................ 20 0 4 0.25 1 1 0 0 0 0 0
........................................ACTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0 0 0
...................................TGTTCGCTGCTGCTCCATGT.................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0
.........................GTTGCTGTGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
.....................GCCTGTTGCTGTGTTGTTCGCT................................................................................................................................................................................................................ 22 0 4 0.25 1 1 0 0 0 0 0
.......................................CGCTGCTGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0
....................................GTTCGCTGCTGCTCCATGT.................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0
................................TGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0
.......................................TGCTGCTGCTCCATGTCGAGGA.............................................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0 0 0
.....................................ATCGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0
...............................GTGTTGTTCGCTGCTGCTCCATG..................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
...........................TGCTGTGTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
...................TAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0
.........................................CTGCTGCTCCATGTCGAGGA.............................................................................................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0
.............................CTGTGTTGTTCGCTGCTGCTCCA....................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
.................................GTTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0
.................................GTTGTTCGCTGCTGCTCCATGTA................................................................................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0
..........................................TGCTGCTCCATGTCGAGGATC............................................................................................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0
....................................TTTCGCTGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 26 1 4 0.25 1 1 0 0 0 0 0
........................TGTTGCTGTGTTGTTCGCT................................................................................................................................................................................................................ 19 0 4 0.25 1 1 0 0 0 0 0
..................ATAGCCTGTTGCTGTGTTGTTCGCT................................................................................................................................................................................................................ 25 2 4 0.25 1 1 0 0 0 0 0
..........................................TGCTGCTCCATGTCGAGGATCCT.......................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
.............................CTGTGTTGTTCGCTGCTGCT.......................................................................................................................................................................................................... 20 0 4 0.25 1 0 0 0 1 0 0
........................................GCTGCTGCTCCATGTCGAGGATCCT.......................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
.................................ATTGTTCGCTGCTGCTCCAT...................................................................................................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0
...............................GTGTTGTTCGCTGCTGCTCCA....................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0
.....................................TTCGCTGCTGCTCCATGTCGAGGA.............................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0
........................TGTTGCTGTGTTGTTCGCTGCT............................................................................................................................................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0
....................AGCCTGTTTCTGTGTTGTT.................................................................................................................................................................................................................... 19 1 4 0.25 1 1 0 0 0 0 0
...................GAGCCTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 20 1 5 0.20 1 0 0 0 1 0 0
.............................................TGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 22 0 15 0.20 3 3 0 0 0 0 0
...........................................GCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 19 0 15 0.20 3 3 0 0 0 0 0
..............................................GCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 21 0 15 0.13 2 2 0 0 0 0 0
............................................CTGCTCCATGTCGAGGATCCT.......................................................................................................................................................................................... 21 0 15 0.13 2 2 0 0 0 0 0
...........................................GCTGCTCCATGTCGAGGA.............................................................................................................................................................................................. 18 0 15 0.13 2 2 0 0 0 0 0
..................AAAAACTGTTGCTGTGTTGTT.................................................................................................................................................................................................................... 21 3 9 0.11 1 1 0 0 0 0 0
....................................................TGTCGAGGATCCTCT........................................................................................................................................................................................ 15 0 20 0.10 2 0 2 0 0 0 0
........................................GCGGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 22 1 11 0.09 1 1 0 0 0 0 0
..................AAAGCCTGTTGCTGTGTCGTT.................................................................................................................................................................................................................... 21 2 12 0.08 1 1 0 0 0 0 0
...........................................GCTGCTCCATGTCGAGGATCC........................................................................................................................................................................................... 21 0 15 0.07 1 1 0 0 0 0 0
............................................AAGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 23 2 15 0.07 1 1 0 0 0 0 0
................................................AAAATGTCGAGGATCCTCTCCTGCT.................................................................................................................................................................................. 25 3 15 0.07 1 1 0 0 0 0 0
.............................................TGCTCCATGTCGAGGATCC........................................................................................................................................................................................... 19 0 15 0.07 1 1 0 0 0 0 0
...........................................GCTGCTCCATGTCGAGGATCCT.......................................................................................................................................................................................... 22 0 15 0.07 1 1 0 0 0 0 0
...........................................GCTGCTCCATGTCGAGGATCCTCTCCT..................................................................................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
...........................................TCTGCTCCATGTCGAGGATCCTCT........................................................................................................................................................................................ 24 1 15 0.07 1 1 0 0 0 0 0
..........................................AGCTGCTCCATGTCGAGGAT............................................................................................................................................................................................. 20 1 15 0.07 1 1 0 0 0 0 0
............................................CTGCTCCATGTCGAGGAACTTCT........................................................................................................................................................................................ 23 2 15 0.07 1 0 0 0 1 0 0
...........................................GCTGCTCCATGTCGAGGATCCTC......................................................................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0
............................................CTGCTCCATGTCGAGGATCCTCTACT..................................................................................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
.................................................CCATGTCGAGGATCCTCTC....................................................................................................................................................................................... 19 0 16 0.06 1 1 0 0 0 0 0
...............................................CTCCATGTCGAGGATCCTCTCC...................................................................................................................................................................................... 22 0 16 0.06 1 1 0 0 0 0 0
................................................ACCATGTCGAGGATCCTCTCCT..................................................................................................................................................................................... 22 1 16 0.06 1 1 0 0 0 0 0
......................................................TCGAGGATCCTCTCCTGCTG................................................................................................................................................................................. 20 0 17 0.06 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_122:2325-2575 + dps_1766 AGAGGGAGATCATCCCCGCTTCGGACAACGACACAACAAGCGACGACGAGGTACAGCTCCTAGGAGAGGACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
droPer2 scaffold_7345:1060-1133 + AGAGGGAGATCATCCCCGCGTCGGACAACGACACAACAAGCGACGACGAGGTACAGCTCCTAGGAGAGGACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGAGGGAGATCATCCCCGCTTCGGACAACGACACAACAAGCGACGACGAGGTACAGCTCCTAGGAGAGGACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................GACACAACAAGCGACGACGAGGT.......................................................................................................................................................................................................23434.50138012930301200
.............................GACACAACAAGCGACGACGAGG........................................................................................................................................................................................................22432.25129012710100000
.....................CGGACAACGACACAACAAGCGACGACG...........................................................................................................................................................................................................27413.255301000005200
.............................GACACAACAAGCGACGACGAGGTA......................................................................................................................................................................................................24411.754704401200000
.....................CGGACAACGACACAACAAGCGACGA.............................................................................................................................................................................................................2547.5030014000001510
............................CGACACAACAAGCGACGACGAGG........................................................................................................................................................................................................2347.503002900100000
.............................GACACAACAAGCGACGACGAG.........................................................................................................................................................................................................2147.252902800001000
.............................GACACAACAAGCGACGACGAGGTAC.....................................................................................................................................................................................................2547.002802420001100
.............................GACACAACAAGCGACGACGA..........................................................................................................................................................................................................2046.502602110400000
.....................CGGACAACGACACAACAAGCGACG..............................................................................................................................................................................................................2444.00160800000800
.....................CGGACAACGACACAACAAGCGAC...............................................................................................................................................................................................................2343.75150420000900
..............................ACACAACAAGCGACGACGAGG........................................................................................................................................................................................................2143.501401310000000
............................CGACACAACAAGCGACGACGAG.........................................................................................................................................................................................................2242.751101100000000
.............................GACACAACAAGCGACGACGAGGTACAG...................................................................................................................................................................................................2742.751101100000000
.............................GACACAACAAGCGACGACG...........................................................................................................................................................................................................1942.50100700300000
.............................GACACAACAAGCGACGACGAGGTAA.....................................................................................................................................................................................................2542.0080700100000
..............................ACACAACAAGCGACGACGAGGT.......................................................................................................................................................................................................2242.0080800000000
.............................GACACAACAAGCGACGACGAGGTACAGC..................................................................................................................................................................................................2841.7570610000000
.....................CGGACAACGACACAACAAGCGA................................................................................................................................................................................................................2241.7570200000500
.........................CAACGACACAACAAGCGACGACG...........................................................................................................................................................................................................2341.5060000001500
.............................GACACAACAAGCGACGACGAGA........................................................................................................................................................................................................2241.5060600000000
.....................CGGACAACGACACAACAAGCGACGAC............................................................................................................................................................................................................2641.5060000000600
............................CGACACAACAAGCGACGACGA..........................................................................................................................................................................................................2141.2550400000100
............................CGACACAACAAGCGACGACGAGGT.......................................................................................................................................................................................................2441.2550500000000
..............................ACACAACAAGCGACGACGAGGTA......................................................................................................................................................................................................2341.0040400000000
............................CGACACAACAAGCGACGAC............................................................................................................................................................................................................1940.7530300000000
.........................CAACGACACAACAAGCGACGACGA..........................................................................................................................................................................................................2440.7530200000100
.............................GACACAACAAGCGACGACGAGGC.......................................................................................................................................................................................................2340.7530120000000
.........................CAACGACACAACAAGCGACGACGAGG........................................................................................................................................................................................................2640.7530300000000
.............................GACACAACAAGCGACGACGAGT........................................................................................................................................................................................................2240.7530300000000
.............................GACACAACAAGCGACGACGAGGTACA....................................................................................................................................................................................................2640.7530300000000
....................TCGGACAACGACACAACAAGCGACGA.............................................................................................................................................................................................................2640.7530200000100
.........................CAACGACACAACAAGCGACGAC............................................................................................................................................................................................................2240.7530300000000
.............................GACACAACAAGCGACGACGAGGA.......................................................................................................................................................................................................2340.7530300000000
............................CGACACAACAAGCGACGACGAGGTA......................................................................................................................................................................................................2540.7530300000000
...................................................TACAGCTCCTAGGAGAGGACGAC.................................................................................................................................................................................23140.5780440000000
......................GGACAACGACACAACAAGCGACGA.............................................................................................................................................................................................................2440.5020200000000
........................ACAACGACACAACAAGCGACGACG...........................................................................................................................................................................................................2440.5020200000000
.....................CGGACAACGACACAACAAGCGACGACGA..........................................................................................................................................................................................................2840.5020000000200
..............................ACACAACAAGCGACGACGA..........................................................................................................................................................................................................1940.5020200000000
..............................ACACAACAAGCGACGACGAGGTAC.....................................................................................................................................................................................................2440.5020200000000
..........................AACGACACAACAAGCGACGACGA..........................................................................................................................................................................................................2340.5020200000000
..............................ACACAACAAGCGACGACGAGGTAA.....................................................................................................................................................................................................2440.5020200000000
...................................................TACAGCTCCTAGGAGAGGACG...................................................................................................................................................................................21140.4360600000000
.............................GACACAACAAGCGACGACA...........................................................................................................................................................................................................1950.4020200000000
.............................GACACAACAAGCGACGAC............................................................................................................................................................................................................1840.2510100000000
......................................AGCGACGACGAGGTACAGC..................................................................................................................................................................................................1940.2510100000000
..........................AACGACACAACAAGCGACGACGAG.........................................................................................................................................................................................................2440.2510100000000
.......................GACAACGACACAACAAGCGACGACGA..........................................................................................................................................................................................................2640.2510100000000
.............................GACACAACAAGCGACGACGAGGTACAA...................................................................................................................................................................................................2740.2510100000000
...............................CACAACAAGCGACGACGAGGTACAGC..................................................................................................................................................................................................2640.2510100000000
...............................CACAACAAGCGACGACGAG.........................................................................................................................................................................................................1940.2510100000000
....................TCGGACAACGACACAACAAGCGACGAC............................................................................................................................................................................................................2740.2510000000100
........................................CGACGACGAGGTACAGCTCC...............................................................................................................................................................................................2040.2510100000000
............................CGACACAACAAGCGACGACGAGGTAC.....................................................................................................................................................................................................2640.2510100000000
.......................GACAACGACACAACAAGCGACG..............................................................................................................................................................................................................2240.2510000001000
..................................AACAAGCGACGACGAGGTAC.....................................................................................................................................................................................................2040.2510100000000
....................TCGGACAACGACACAACAAGCGACG..............................................................................................................................................................................................................2540.2510100000000
......................GGACAACGACACAACAAGCGAC...............................................................................................................................................................................................................2240.2510100000000
...........................ACGACACAACAAGCGACGACG...........................................................................................................................................................................................................2140.2510100000000
....................TCGGACAACGACACAACAAGCGACGACG...........................................................................................................................................................................................................2840.2510000000010
..................................AACAAGCGACGACGAGGTA......................................................................................................................................................................................................1940.2510100000000
.............................GACACAACAAGCGACGACGAGGTT......................................................................................................................................................................................................2440.2510000100000
........................ACAACGACACAACAAGCGACG..............................................................................................................................................................................................................2140.2510100000000
.......................GACAACGACACAACAAGCGACGA.............................................................................................................................................................................................................2340.2510100000000
.......................GACAACGACACAACAAGCGACGACG...........................................................................................................................................................................................................2540.2510100000000
.....................CGGACAACGACACAACAAGCG.................................................................................................................................................................................................................2140.2510000000100
.............................GACACAACAAGCGACGACGAGGTACAGT..................................................................................................................................................................................................2840.2510100000000
.....................CGGACAACGACACAACAAGCGACGACGT..........................................................................................................................................................................................................2840.2510100000000
....................................................ACAGCTCCTAGGAGAGGACGA..................................................................................................................................................................................21160.1320200000000
.................................................GGTACAGCTCCTAGGAGAGGACG...................................................................................................................................................................................23140.0710100000000
..................................................GTACAGCTCCTAGGAGAGGAC....................................................................................................................................................................................21140.0710010000000
...........................................CGACGAGGTACAGCTCCTAGGAG.........................................................................................................................................................................................23150.0710100000000
droPer2
AGAGGGAGATCATCCCCGCGTCGGACAACGACACAACAAGCGACGACGAGGTACAGCTCCTAGGAGAGGACGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................CGACACAACAAGCGACGACGAGG........................................................................................................................................................................................................2391.44130130000
............................CGACACAACAAGCGACGACGAGGT.......................................................................................................................................................................................................2490.787070000
.............................GACACAACAAGCGACGACGAGGT.......................................................................................................................................................................................................2390.333012000
............................CGACACAACAAGCGACGACGAGGTA......................................................................................................................................................................................................2590.222020000
............................CGACACAACAAGCGACGACGAG.........................................................................................................................................................................................................2290.111010000
............................CGACACAACAAGCGACGACGAGGTAA.....................................................................................................................................................................................................2690.111010000
............................CGACACAACAAGCGACGACGAGGTACAG...................................................................................................................................................................................................2890.111010000
.............................GACACAACAAGCGACGACGAGG........................................................................................................................................................................................................2290.111010000
.............................GACACAACAAGCGACGACGAG.........................................................................................................................................................................................................2190.111010000
................................................AGGTACAGCTCCTAGGAGAGG......................................................................................................................................................................................21200.051010000
.............................................ACGAGGTACAGCTCCTAGGAGAGG......................................................................................................................................................................................24200.051010000

Generated: 05/18/2015 at 01:29 AM