ID:

dps_176

 Coordinate:

Unknown_group_277:18463-18524 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.5 -11.4 -11.4

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dps_176  Unknown_group_277:18463-18485 +
  2. Unknown_group_252:13601-13623 -
  3. Unknown_group_252:18483-18505 -
star

Sense Strand Reads

GGAAGATAAGATTAGTCAACAGCGCTCGCAAAGTCTAGACGTTGGACAGGAAAAGACGTAGAACACCATGTGCGGAGTTGGCCCTATTAGTAGTTGTGGTTCCTTTCCCCCTTAGTATTGTTTTGCCGTATTAAGTGTTTTTGTGCTGAAGATCAGTGAGTT
***********************************........(((.(((((..((((((((((.((......)).)))....)))).....)))....))))).)))......************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M040
female body
 M059
embryo
 GSM343916
embryo
 M022
male body		 V112
male body		 M062
head
 GSM444067
head
..................................................AAAAGACGTAGAACACCATGTGC......................................................................................... 23 0 3 223.33 670 497 134 24 7 5 2 1 0
...................................................AAAGACGTAGAACACCATGTGC......................................................................................... 22 0 3 90.67 272 206 57 6 3 0 0 0 0
...................................................AAAGACGTAGAACACCATGTGCGG....................................................................................... 24 0 1 27.00 27 24 3 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTG.......................................................................................... 22 0 3 17.33 52 30 20 0 1 0 1 0 0
...................................................AAAGACGTAGAACACCATGTGCGGA...................................................................................... 25 0 1 13.00 13 13 0 0 0 0 0 0 0
..........................................TGGACAGGAAAAGACGTAGAACACCA.............................................................................................. 26 0 2 10.00 20 16 4 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTGCGG....................................................................................... 25 0 1 9.00 9 9 0 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTGCG........................................................................................ 24 0 1 7.00 7 6 1 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGT........................................................................................... 21 0 3 7.00 21 13 7 0 1 0 0 0 0
.........................................TTGGACAGGAAAAGACGTAGAACAC................................................................................................ 25 0 3 5.33 16 16 0 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGTG.......................................................................................... 21 0 3 5.00 15 5 9 1 0 0 0 0 0
.........................................TTGGACAGGAAAAGACGTAGAACACCA.............................................................................................. 27 0 2 4.50 9 9 0 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGTGCG........................................................................................ 23 0 1 4.00 4 3 1 0 0 0 0 0 0
.................................TCTAGACGTTGGACAGGAAAAGACG........................................................................................................ 25 0 3 4.00 12 12 0 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGTGCGGAGT.................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0
.........................................TTGGACAGGAAAAGACGTAGAAC.................................................................................................. 23 0 3 2.67 8 8 0 0 0 0 0 0 0
..........................................TGGACAGGAAAAGACGTAGAACACC............................................................................................... 25 0 2 2.50 5 3 2 0 0 0 0 0 0
.........................................TTGGACAGGAAAAGACGTAGAACACC............................................................................................... 26 0 2 2.50 5 3 2 0 0 0 0 0 0
..............................................CAGGAAAAGACGTAGAACACCATGTGC......................................................................................... 27 0 3 2.33 7 7 0 0 0 0 0 0 0
............TAGTCAACAGCGCTCGCAAAGTC............................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGACGTAG..................................................................................................... 26 0 3 2.00 6 5 1 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGACGT....................................................................................................... 24 0 3 2.00 6 0 6 0 0 0 0 0 0
...............................................AGGAAAAGACGTAGAACACCATGTGCG........................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................TGGCCCTATTAGTAGTTGTGG............................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATG............................................................................................ 20 0 3 2.00 6 0 6 0 0 0 0 0 0
..............................................................................TGGCCCTATTAGTAGTTGTGGT.............................................................. 22 0 1 2.00 2 0 1 0 1 0 0 0 0
......................................................................................TTAGTAGTTGTGGTTCCTTTCCCCC................................................... 25 0 1 2.00 2 0 1 1 0 0 0 0 0
..........................................TGGACAGGAAAAGACGTAGAACAC................................................................................................ 24 0 3 2.00 6 6 0 0 0 0 0 0 0
....................................................AAGACGTAGAACACCATGTGCGG....................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................TGGCCCTATTAGTAGTTGTGGTT............................................................. 23 0 1 2.00 2 0 1 0 1 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGACG........................................................................................................ 23 0 3 1.33 4 0 4 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGACGTAGA.................................................................................................... 27 0 3 1.33 4 2 2 0 0 0 0 0 0
....................................................AAGACGTAGAACACCATGTGC......................................................................................... 21 0 3 1.33 4 0 4 0 0 0 0 0 0
.....................................................AGACGTAGAACACCATGTGC......................................................................................... 20 0 3 1.33 4 4 0 0 0 0 0 0 0
..........................................TGGACAGGAAAAGACGTAGAACA................................................................................................. 23 0 3 1.33 4 4 0 0 0 0 0 0 0
.......................................................................................TAGTAGTTGTGGTTCCTTTCCCCCG.................................................. 25 1 4 1.25 5 0 5 0 0 0 0 0 0
.......................GCTCGCAAAGTCTAGACGTTGGACAGG................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................AAGACGTAGAACACCATGTGCGC....................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0
...........................................GGACAGGAAAAGACGTAGAACACCA.............................................................................................. 25 0 2 1.00 2 1 1 0 0 0 0 0 0
...........TTAGTCAACAGCGCTCGCAAAGTC............................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................AAGACGTAGAACACCATGTGCGGAGT.................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................TAGTTGTGGTTCCTTTCCCCCTTAG............................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................GAAAGACGTAGAACACCATGTGCG........................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0
.........................................TTGGACAGGAAAAGACGTAGAACA................................................................................................. 24 0 3 1.00 3 2 1 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGTGCGGAG..................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................TATTAGTAGTTGTGGTTCCTTT........................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................TGCAGAGTTGGCCCTATTAGTAGTTG.................................................................. 26 1 3 1.00 3 0 3 0 0 0 0 0 0
....................................................................................TATTAGTAGTTGTGGTTCCTTTC....................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................GCTCGCAAAGTCTAGACGTTGGAC................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................TGGCCCTATTAGTAGTTGTGGTTC............................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................TGCTGAGTTGGCCCTATTAGTAG..................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................TTAGTAGTTGTGGTTCCTTTCC...................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGTGCGGAGC.................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0
.................................................GAAAAGACGTAGAACACCATGTGC......................................................................................... 24 0 3 1.00 3 3 0 0 0 0 0 0 0
......TAAGATTAGTCAACAGCGCTCGCA.................................................................................................................................... 24 0 2 1.00 2 0 2 0 0 0 0 0 0
....................................................AAGACGTAGAACACCATGTG.......................................................................................... 20 0 3 1.00 3 0 3 0 0 0 0 0 0
.......................................................................................TAGTAGTTGTGGTTCCTTTCCCC.................................................... 23 0 4 0.75 3 0 3 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAA............................................................................................................ 19 0 3 0.67 2 0 2 0 0 0 0 0 0
.................................TCTAGACGTTGGACAGGAAAAGA.......................................................................................................... 23 0 3 0.67 2 0 2 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCAT............................................................................................. 19 0 3 0.67 2 0 2 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTGA......................................................................................... 23 1 3 0.67 2 1 1 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGAGC......................................................................................... 22 1 3 0.67 2 1 0 1 0 0 0 0 0
..................................................AGAAGACGTAGAACACCATGTGC......................................................................................... 23 1 3 0.67 2 0 1 1 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGT........................................................................................... 20 0 3 0.67 2 0 1 0 1 0 0 0 0
.................................TCTAGACGTTGGACAGGAAAAG........................................................................................................... 22 0 3 0.67 2 0 2 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATG............................................................................................ 19 0 3 0.67 2 1 1 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTGCT........................................................................................ 24 1 3 0.67 2 2 0 0 0 0 0 0 0
....................................AGACGTTGGACAGGAAAAGACGT....................................................................................................... 23 0 3 0.67 2 0 2 0 0 0 0 0 0
..........................................TGGACAGGAAAAGACGTAGAAC.................................................................................................. 22 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................GACAGGAAAAGACGTAGAACACCATGT........................................................................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0
............................................GACAGGAAAAGACGTAGAACACCA.............................................................................................. 24 0 2 0.50 1 0 1 0 0 0 0 0 0
......TAAGATTGGTCAACAGCGCTCGC..................................................................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0 0
......TAAGATTAGTCAACAGCGCTCGCAA................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
..........................................TGGACAGGAAAAGACGTAGAACACCATG............................................................................................ 28 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................................................................................TGTGCTGAAGATCAGTGAGTT 21 0 4 0.50 2 2 0 0 0 0 0 0 0
...........TTAGTCAACAGCGCTCGCAAAG................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................TCTAGACGTTGGACAGGAAAAGACGT....................................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................AAAGACGTAGAACGCCATGTGC......................................................................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0
..............................................CAGGAAAAGACGTAGAACACCATG............................................................................................ 24 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................AAAGACATAGAACACCATGTGC......................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGAC......................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................GTTGGACAGGAAAAGACGTAGAA................................................................................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................AAAGACGGAGAACACCATGT........................................................................................... 20 1 3 0.33 1 0 0 0 1 0 0 0 0
...................................................AAAGACGTAGAACACCGTGTG.......................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATTTGC......................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................................AGAGACGTAGAACACCATGTGC......................................................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTTC......................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGCGC......................................................................................... 23 1 3 0.33 1 0 0 0 1 0 0 0 0
...........................................GGACAGGAAAAGACGTAGAACAC................................................................................................ 23 0 3 0.33 1 0 1 0 0 0 0 0 0
.................................TCTAGACGTTGGACAGGAAAAGACGA....................................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTGT......................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGACGTA...................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................AGGAAAAGACGTAGAACACCATGTGC......................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................TCTAGACGTTGGACAGGA............................................................................................................... 18 0 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AAAAGACGTAGAACGCCATGTGC......................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAGT.......................................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AAAAGACGTAGGACACCATGT........................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AAAAGGCGTAGAACACCATGTGC......................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
..................................................AAAAGACGTAGAGCACCATGTG.......................................................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0
..................................................AAAAGACGTAGAACACCATGTAA......................................................................................... 23 2 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AAAGGACGTAGAACACCATGTG.......................................................................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0
..................................................AACAGACGTAGAACACCATGTGC......................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCATGCAG......................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0
...................................TAGACGTTGGACAGGAAAAG........................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0 0 0
............................................................................................................................................TTGTGCTGAAGATCAGTGAGT. 21 0 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................TAGTAGTTGTGGTTCCTTTCCC..................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0
...................................................AAAGACGTAGAACACAATGTG.......................................................................................... 21 1 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................AGTTGTGGTTCCTTTCCCCC................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................TAGTAGTTGTGGTTCCTTTCC...................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................................................TTGTGCTGAAGATCAGTGAGTT 22 0 4 0.25 1 0 1 0 0 0 0 0 0
..........................................................................................TAGTTGTGGTTCCTTTCCCC.................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0
........................................................................................AGTAGTTGTGGTTCCTTTCCCCC................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0
...................................................AAAGACGTAGAAAACCATGTGC......................................................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................TAGTAGTTGTGGTTCCTATCCCC.................................................... 23 1 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................GTTGTGGTTCCTTTCCCC.................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
........................................................................................AGTAGTTGTGGTTCCTTTCC...................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0
..........................................................................................TAGTTGTGGTTCCTTTCCCCCTTAAAA............................................. 27 2 4 0.25 1 0 1 0 0 0 0 0 0
..........................................................................................TAGTTGTGGTTCCTTTCCCCCGTA................................................ 24 1 4 0.25 1 0 0 0 0 0 1 0 0
..................................................AAAAGACGTAGAACACAATGTGC......................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0
...................................................AAAGACGTAGAACACCAGGTGC......................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................TAGTAGTTGTGGTTCCTTTCCCCC................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0
........................................................................................AGTAGTTGTGGTTCCTATCT...................................................... 20 2 4 0.25 1 0 1 0 0 0 0 0 0
..........................................TGCTCAGGAAAAGACGTAGAACACCA.............................................................................................. 26 2 4 0.25 1 0 0 1 0 0 0 0 0
.........................................TTGGACAGGAAAAGACAAAAAA................................................................................................... 22 3 5 0.20 1 0 1 0 0 0 0 0 0
.............................................ACAGGAAGAGACGTACAA................................................................................................... 18 2 7 0.14 1 0 1 0 0 0 0 0 0
...................CAGCGCTCGCCAAGTCTG............................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCTTCTATTCTAATCAGTTGTCGCGAGCGTTTCAGATCTGCAACCTGTCCTTTTCTGCATCTTGTGGTACACGCCTCAACCGGGATAATCATCAACACCAAGGAAAGGGGGAATCATAACAAAACGGCATAATTCACAAAAACACGACTTCTAGTCACTCAA
************************************************........(((.(((((..((((((((((.((......)).)))....)))).....)))....))))).)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902010
ovaries
 V112
male body		 GSM343916
embryo
.....................................CTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 24 0 3 47.00 141 117 13 7 1 3
....................................TCTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 24 0 3 43.33 130 127 2 0 1 0
....................................TCTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 25 0 3 40.33 121 104 12 4 1 0
.....................................CTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 23 0 3 16.33 49 48 1 0 0 0
...................................ATCTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 25 0 3 15.00 45 45 0 0 0 0
...................................ATCTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 26 0 3 10.33 31 30 1 0 0 0
.................................AGATCTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 27 0 3 6.33 19 18 0 0 0 1
......................................TGCAACCTGTCCTTTTCTGCATC..................................................................................................... 23 0 3 5.33 16 15 1 0 0 0
..................................GATCTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 26 0 3 5.33 16 16 0 0 0 0
.......................................GCAACCTGTCCTTTTCTGCATC..................................................................................................... 22 0 3 4.00 12 12 0 0 0 0
...........................................................................................................GGGGAATCATAACAAAACGGCATAATT............................ 27 0 1 3.00 3 3 0 0 0 0
................................................................................CGGGATAATCATCAACACCAAGGAAAG....................................................... 27 0 1 3.00 3 3 0 0 0 0
...........................................................................................................GGGGAATCATAACAAAACGGCATAAT............................. 26 0 1 3.00 3 3 0 0 0 0
............................................................................................................GGGAATCATAACAAAACGGCATAATT............................ 26 0 1 2.00 2 1 1 0 0 0
......................................TGCAACCTGTCCTTTTCTGCAT...................................................................................................... 22 0 3 2.00 6 6 0 0 0 0
...TCTATTCTAATCAGTTGTCGCGAGCGT.................................................................................................................................... 27 0 2 2.00 4 4 0 0 0 0
.............TCAGTTGTCGCGAGCGTTTCAGAT............................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
.........CTAATCAGTTGTCGCGAGCGTTTCAGA.............................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
.................................AGATCTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 28 0 3 1.67 5 5 0 0 0 0
........TCTAATCAGTTGTCGCGAGCGTTT.................................................................................................................................. 24 0 2 1.50 3 3 0 0 0 0
........................................CAACCTGTCCTTTTCTGCAT...................................................................................................... 20 0 3 1.33 4 4 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGCATCTT................................................................................................... 26 0 3 1.33 4 3 1 0 0 0
....................................TCTGCAACCTGTCCTTTTCTGCA....................................................................................................... 23 0 3 1.33 4 4 0 0 0 0
..........................................................................................ATCAACACCAAGGAAAGGGGGAAT................................................ 24 0 4 1.25 5 0 0 5 0 0
....................................................................ACACGCCTCAACCGGGATAATCAT...................................................................... 24 0 1 1.00 1 1 0 0 0 0
..................................................................GTACACGCCTCAACCGGGATAAT......................................................................... 23 0 1 1.00 1 1 0 0 0 0
......................................................................ACGCCTCAACCGGGATAATCA....................................................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................................GATAATCATCAACACCAAGGAAAG....................................................... 24 0 1 1.00 1 1 0 0 0 0
.....................CGCGAGCGTTTCAGATCTGCAACCT.................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................CTCAACCGGGATAATCATCAACACCAAG............................................................ 28 0 1 1.00 1 1 0 0 0 0
...................................ATCTGCAACCTGTCCTTTTCTGCA....................................................................................................... 24 0 3 1.00 3 3 0 0 0 0
.........................................................................CCTCAACCGGGATAATCATCAACA................................................................. 24 0 1 1.00 1 1 0 0 0 0
...............................................................GTGGTACACGCCTCAACCGGGATAATC........................................................................ 27 0 1 1.00 1 1 0 0 0 0
................................................................................................ACCAAGGAAAGGGGGAATCATAACA......................................... 25 0 1 1.00 1 1 0 0 0 0
..................................................................................GGATAATCATCAACACCAAGGAA......................................................... 23 0 1 1.00 1 1 0 0 0 0
.........................................................................................................AGGGGGAATCATAACAAAACGGCAT................................ 25 0 1 1.00 1 1 0 0 0 0
..........................................................................CTCAACCGGGATAATTATCAACACC............................................................... 25 1 1 1.00 1 1 0 0 0 0
................................................................................CGGGATAATTATCAACACCAAGGAAAG....................................................... 27 1 1 1.00 1 1 0 0 0 0
.................................................................................GGGATAATCATCAACACCAAGGAAAG....................................................... 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................GAAAGGGGGAATCATAACAAAACGGCAT................................ 28 0 1 1.00 1 1 0 0 0 0
.............................................................................................................GGAATCATAACAAAACGGCATAAT............................. 24 0 1 1.00 1 1 0 0 0 0
..................................................................................................................CATAACAAAACGGCATAATTCAC......................... 23 0 1 1.00 1 1 0 0 0 0
.................................................................GGTACACGCCTCAACCGGGATAATCA....................................................................... 26 0 1 1.00 1 1 0 0 0 0
........TCTAATCAGTTGTCGCGAGCGTTTCAG............................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..................................................................GTACACGCCTCAACCGGGATAATCAT...................................................................... 26 0 1 1.00 1 1 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGCA....................................................................................................... 22 0 3 1.00 3 3 0 0 0 0
..................................................................GTACACGCCTCAACCGGGATAATCA....................................................................... 25 0 1 1.00 1 1 0 0 0 0
....................................CCTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 24 1 3 1.00 3 0 3 0 0 0
..............................................................................ACCGGGATAATCATCAACACC............................................................... 21 0 1 1.00 1 1 0 0 0 0
..................TGTCGCGAGCGTTTCAGATCTGCAACC..................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................GGGGGAATCATAACAAAACGGCATAATT............................ 28 0 1 1.00 1 1 0 0 0 0
.....................................................................................TAATTATCAACACCAAGGAA......................................................... 20 1 1 1.00 1 1 0 0 0 0
.......................................GCAACCTGTCCTTTTCTGCAT...................................................................................................... 21 0 3 1.00 3 3 0 0 0 0
.......................CGAGCGTTTCAGATCTGCAACC..................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.................................................................GGTACACGCCTCAACCGGGATAAT......................................................................... 24 0 1 1.00 1 1 0 0 0 0
..................................GATCTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 27 0 3 1.00 3 3 0 0 0 0
.......................................................................CGCCTCAACCGGGATAATCATCAAC.................................................................. 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................AATCAACACCAAGGAAAGGGGGAAT................................................ 25 1 4 0.75 3 0 0 3 0 0
............................................................................................CAACACCAAGGAAAGGGGGAAT................................................ 22 0 4 0.75 3 0 0 3 0 0
....................................ACTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 25 1 3 0.67 2 2 0 0 0 0
..................................................................GTACACGTCTCAACCGGGATAATCAT...................................................................... 26 1 3 0.67 2 2 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGTATC..................................................................................................... 24 1 3 0.67 2 0 2 0 0 0
....................................TCTGCAACCTGTCCTTTTCTGCAGC..................................................................................................... 25 1 3 0.67 2 0 2 0 0 0
......................................TGCAACCTGTCCTTTTCTGCATCTT................................................................................................... 25 0 3 0.67 2 2 0 0 0 0
.................................................................GGTACACGTCTCAACCGGGATAAT......................................................................... 24 1 3 0.67 2 2 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGCAGC..................................................................................................... 24 1 3 0.67 2 0 2 0 0 0
..................................AATCTGCAACCTGTCCTTTTCTGCAT...................................................................................................... 26 1 3 0.67 2 2 0 0 0 0
....................................CCTGCAACCTGTCCTTTTCTGCATC..................................................................................................... 25 1 3 0.67 2 0 2 0 0 0
.......................................................................................................................................AAAAAAACACGACTTCTAGTCACTC.. 25 1 2 0.50 1 1 0 0 0 0
............................................CTGTCCTTTTCTGCATCTTGTGGT.............................................................................................. 24 0 2 0.50 1 1 0 0 0 0
.........CTAATCAGTTGTCGCGAGCGTTT.................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
....CTATTCTAATCAGTTGTCGCGAGCGT.................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
......ATTCTAATCAGTTGTCGCGAGCGT.................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
....CTATTCTAATCAGTTGTCGCGAGCGTT................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................TCACAAAAACACGACTTCTAGTCACT... 26 0 2 0.50 1 1 0 0 0 0
........TCTAATCAGTTGTCGCGAGCGTT................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.........................................................................................CATCAACACCAAGGAAAGGGGGCAT................................................ 25 1 4 0.50 2 1 0 0 1 0
............................................................................................................................CGGCATAATTCACAAAAACACGACTTC........... 27 0 2 0.50 1 1 0 0 0 0
.............................................TGTCCTTTTCTGCATCTTGTG................................................................................................ 21 0 3 0.33 1 1 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGCATCT.................................................................................................... 25 0 3 0.33 1 1 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGCCTC..................................................................................................... 24 1 3 0.33 1 0 1 0 0 0
......................................................................ACGTCTCAACCGGGATAATTATCAACACC............................................................... 29 2 3 0.33 1 1 0 0 0 0
..................................................................GTACACGTCTCAACCGGGATAATTAT...................................................................... 26 2 3 0.33 1 1 0 0 0 0
.......................................GCAACCTGTCCTTTTCTGCATCTT................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
.....................................................................CACGTCTCAACCGGGATAATCATCAAC.................................................................. 27 1 3 0.33 1 1 0 0 0 0
....................................TCTGCAACATGTCCTTTTCTGCATC..................................................................................................... 25 1 3 0.33 1 1 0 0 0 0
...................................ATCTGCAACCTGTCCTTTTCTGCATG..................................................................................................... 26 1 3 0.33 1 1 0 0 0 0
.....................................CTGCAACCTGTCCTTTTCTGGATC..................................................................................................... 24 1 3 0.33 1 0 1 0 0 0
.........................................................................TCTCAACCGGGATAATCATCAAC.................................................................. 23 1 3 0.33 1 1 0 0 0 0
.................................................................GGTACACGTCTCAACCGGGATAATCAT...................................................................... 27 1 3 0.33 1 1 0 0 0 0
..................................................................GTACACGTCTCAACCGGGATAATCATCAA................................................................... 29 1 3 0.33 1 1 0 0 0 0
..................................................................GTACACGTCTCAACCGGGATAATCATC..................................................................... 27 1 3 0.33 1 1 0 0 0 0
..........................................ACCTGTCCTTTTCTGCAT...................................................................................................... 18 0 3 0.33 1 1 0 0 0 0
....................................................................ACACGTCTCAACCGGGATAAT......................................................................... 21 1 3 0.33 1 1 0 0 0 0
..................................................................GTACACGTCTCAACCGGGATAAT......................................................................... 23 1 3 0.33 1 1 0 0 0 0
....................................TCTGCAACCTGTCCTTTTCTGCATCTT................................................................................................... 27 0 3 0.33 1 1 0 0 0 0
....................................TCCGCAACCTGTCCTTTTCTGCAT...................................................................................................... 24 1 3 0.33 1 0 0 0 1 0
....................................TCTGCAACCTGTCCTTTTCT.......................................................................................................... 20 0 3 0.33 1 1 0 0 0 0
....................................................................ACACGTCTCAACCGGGATAATCATCAAC.................................................................. 28 1 3 0.33 1 1 0 0 0 0
.........................................AACCTGTCCTTTTCTGCAT...................................................................................................... 19 0 3 0.33 1 1 0 0 0 0
...........................................CCTGTCCTTTTCTGCATCTTGT................................................................................................. 22 0 3 0.33 1 1 0 0 0 0
...................................................................TACACGTCTCAACCGGGATAATCAT...................................................................... 25 1 3 0.33 1 1 0 0 0 0
....................................TCTGCAACCTGTCCTTTTCTGC........................................................................................................ 22 0 3 0.33 1 0 1 0 0 0
...................................ATCTGCAACCTGTCCTTTCCTGCAT...................................................................................................... 25 1 3 0.33 1 1 0 0 0 0
......................................TGCAACCTGTCCTTTTCTGCA....................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
......................................TGCAACCTGTCCTTTTCTGCAGC..................................................................................................... 23 1 3 0.33 1 0 1 0 0 0
....................................................................ACACGTCTCAACCGGGATAATTATCAACA................................................................. 29 2 3 0.33 1 1 0 0 0 0
...................................ATCTGCAACCTGTCCTTTTCTGCAGC..................................................................................................... 26 1 3 0.33 1 0 1 0 0 0
...................................ATCTGCAACCTGTCCTTTTCTGC........................................................................................................ 23 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................TGCAAAACACGACTTCTAGTCACTC.. 25 3 4 0.25 1 1 0 0 0 0
.........................................................................................................................................AAAAACACGACTTCTAGTCACTCAA 25 0 4 0.25 1 1 0 0 0 0
........................................................................................................................................CAAAAACACGACTTCTAGTCACT... 23 0 4 0.25 1 1 0 0 0 0
.......................................................................................ATCATCAACACCAAGGATAGGGGGAAT................................................ 27 1 4 0.25 1 1 0 0 0 0
...........................................................................................TCAACACCAAGGAAAGGGGGAAT................................................ 23 0 4 0.25 1 1 0 0 0 0
........................................................................................................................................CAAAAACACGACTTCTAGTCACTC.. 24 0 4 0.25 1 1 0 0 0 0
...........AAACAGTTGTCGCGAGCGGTT.................................................................................................................................. 21 2 4 0.25 1 1 0 0 0 0
.............................................................................................AACACCAAGGAAAGGGGGAAT................................................ 21 0 4 0.25 1 0 0 1 0 0
.....................................................................CACGCTTCAACCGCGACAA.......................................................................... 19 3 20 0.05 1 1 0 0 0 0
.CGTCTAGTCTAATCGGTTG.............................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0
.....................................................................................................CGATCGGGGGAATCATAA........................................... 18 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_277:18413-18574 + dps_176 G--GAAGATAAGATTAGTCAACAGCGCTCGCAAAGT---------------CTAGACGTTGGACAGGAAAAGACGTAGAAC-ACCATGTGCGGAGTTGGCCCTATT-AGTAGTTGTGGTTCC----TTT-CCCCCTTAGTATTGTTTTGCCG---TATTAAGTG-TTT--TTG-------------TGCTGAAGATCAGTGAGTT
droPer2 scaffold_83:124939-125100 - G--GAAGATAAGATTAGTCAACAGCGCTCGCAAAGT---------------CTAGACGTTGGACAGGAAAAGACGTAGAAC-ACCATGTGCGGAGTTGGCCCTATT-AGTAGTTGTGGTTCC----TTT-CCCCCTTAGTATTGTTTTGCCG---TATTAAGTG-TTT--TTG-------------TGCTGAAGATCAGTGAGTT
droKik1 scf7180000299629:2153-2303 - GCAGAAGATAGTG-GATCCGACGGAGCTCGCTGGAA--GTAGCA-ATCGATCTCGGA-GT--A-GGCAAGAGACGTGAAAA-AGCAGGAG-GCAGTTGGCTCCGGCATGGCATCATT---T----TTTTTCCCCTT---TGTTGT----CCAG---ATAGAGTTGTTT--TTG-------------T------------TGTGTT
droFic1 scf7180000454086:323250-323408 + GCAGAAGATAGTG-GATCCGATGGAGCTCACAAATA--TGAA--CATTGATCCTGGCGTT--A-GGCAGATGACGCAGAAAAAGCGGGTG-GTGTTTGGCTCCGGTTAAGTGTCAGTA--T----TTTCTCCCCCCTCTTATCGT----CCAA---TTTGAGTT-GTT--TGG-------------TGTTTGATATC--------
droEle1 scf7180000486738:1541-1694 + G--GAAGATGGGA-TGGTCAACAGCGCTCACCGAGAA----A---------CTT-GTGCTGGT-AAATGAAGACACTGAAA-TCCGGTGGTGAAGTTGGCTCCGTT-GAATGTTGAG---T----TTTTCCCTCCCTGTTGTAGT----TGAA----TTGTGTTTATT--TTG-------------TTCAAGGTGTCATTGT-GT
droTak1 scf7180000413718:182-322 + G--GAAGATGGGA-TGGTCAACAGCGCTCACCGAGAA----A---------CTT-GTGCTGGA-AATAGAAGACACTGAAA-TCCGGGGGTGAAGTTAGCTCCGGT-GAATGTAGTG---T----TTGTCCCTCCCTGTTGTAGT----T--------GTGCTT-ATTTTTTG-------------T--TC---------GAGGT
droYak3 v2_chrUn_5372:223-377 + GAAGAAGATAGAG-GATCCGATGGAGCTCGCCATGGCAT--ACAACTCGATCGCAGAGGT--A-GATGAAAGACGCAGGAA-AGCATGTG-GAAGTTGGCTCCGGTTAGGCATCACT---CCTTTTTTTTCCCCCCTTTTGTTGT----CCAA----TTGAGTT---T--CCG-------------T------------TT-TTT
droEre2 scaffold_4824:42164-42339 - GAAGAATATAGAG-GATCCGATGGAGCTCGCGAAGAC----ACATTTCAATCTAGGATGT--A-GGTAGACGACGCAGAAA-AGTATCTG-TAAGTTGTCTCAGGC-----ATCACT---CC----TTTACCCCCCTATTGTTGT----TCAATTTAGTGATTT-TTT--TGGTTTTGTTGTTTTCGGCTAGAAATAATAAATGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
G--GAAGATAAGATTAGTCAACAGCGCTCGCAAAGT---------------CTAGACGTTGGACAGGAAAAGACGTAGAAC-ACCATGTGCGGAGTTGGCCCTATT-AGTAGTTGTGGTTCC----TTT-CCCCCTTAGTATTGTTTTGCCG---TATTAAGTG-TTT--TTG-------------TGCTGAAGATCAGTGAGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................AAAAGACGTAGAAC-ACCATGTGC..................................................................................................................233223.33670513424170249700
....................................................................AAAGACGTAGAAC-ACCATGTGC..................................................................................................................22390.672720576030020600
....................................................................AAAGACGTAGAAC-ACCATGTGCGG................................................................................................................24127.002703000002400
...................................................................AAAAGACGTAGAAC-ACCATGTG...................................................................................................................22317.3352020001013000
....................................................................AAAGACGTAGAAC-ACCATGTGCGGA...............................................................................................................25113.001300000001300
...........................................................TGGACAGGAAAAGACGTAGAAC-ACCA.......................................................................................................................26210.002004000001600
...................................................................AAAAGACGTAGAAC-ACCATGTGCGG................................................................................................................2519.0090000000900
...................................................................AAAAGACGTAGAAC-ACCATGTGCG.................................................................................................................2417.0070100000600
...................................................................AAAAGACGTAGAAC-ACCATGT....................................................................................................................2137.002107001001300
..........................................................TTGGACAGGAAAAGACGTAGAAC-AC.........................................................................................................................2535.331600000001600
....................................................................AAAGACGTAGAAC-ACCATGTG...................................................................................................................2135.00150910000500
..........................................................TTGGACAGGAAAAGACGTAGAAC-ACCA.......................................................................................................................2724.5090000000900
....................................................................AAAGACGTAGAAC-ACCATGTGCG.................................................................................................................2314.0040100000300
...................................T---------------CTAGACGTTGGACAGGAAAAGACG..................................................................................................................................2534.001200000001200
....................................................................AAAGACGTAGAAC-ACCATGTGCGGAGT.............................................................................................................2713.0030000000300
..........................................................TTGGACAGGAAAAGACGTAGAAC-...........................................................................................................................2332.6780000000800
...........................................................TGGACAGGAAAAGACGTAGAAC-ACC........................................................................................................................2522.5050200000300
..........................................................TTGGACAGGAAAAGACGTAGAAC-ACC........................................................................................................................2622.5050200000300
...............................................................CAGGAAAAGACGTAGAAC-ACCATGTGC..................................................................................................................2732.3370000000700
..............TAGTCAACAGCGCTCGCAAAGT---------------C.........................................................................................................................................................2312.0020200000000
....................................................TAGACGTTGGACAGGAAAAGACGTAG...............................................................................................................................2632.0060100000500
....................................................TAGACGTTGGACAGGAAAAGACGT.................................................................................................................................2432.0060600000000
................................................................AGGAAAAGACGTAGAAC-ACCATGTGCG.................................................................................................................2712.0020000000200
................................................................................................TGGCCCTATT-AGTAGTTGTGG.......................................................................................2112.0020200000000
...................................................................AAAAGACGTAGAAC-ACCATG.....................................................................................................................2032.0060600000000
................................................................................................TGGCCCTATT-AGTAGTTGTGGT......................................................................................2212.0020100100000
........................................................................................................TT-AGTAGTTGTGGTTCC----TTT-CCCCC......................................................................2512.0020110000000
...........................................................TGGACAGGAAAAGACGTAGAAC-AC.........................................................................................................................2432.0060000000600
.....................................................................AAGACGTAGAAC-ACCATGTGCGG................................................................................................................2312.0020000000200
................................................................................................TGGCCCTATT-AGTAGTTGTGGTT.....................................................................................2312.0020100100000
....................................................TAGACGTTGGACAGGAAAAGACG..................................................................................................................................2331.3340400000000
....................................................TAGACGTTGGACAGGAAAAGACGTAGA..............................................................................................................................2731.3340200000200
.....................................................................AAGACGTAGAAC-ACCATGTGC..................................................................................................................2131.3340400000000
......................................................................AGACGTAGAAC-ACCATGTGC..................................................................................................................2031.3340000000400
...........................................................TGGACAGGAAAAGACGTAGAAC-A..........................................................................................................................2331.3340000000400
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCCCCG.....................................................................2541.2550500000000
.........................GCTCGCAAAGT---------------CTAGACGTTGGACAGG..........................................................................................................................................2711.0010000000100
.....................................................................AAGACGTAGAAC-ACCATGTGCGC................................................................................................................2311.0010100000000
............................................................GGACAGGAAAAGACGTAGAAC-ACCA.......................................................................................................................2521.0020100000100
.............TTAGTCAACAGCGCTCGCAAAGT---------------C.........................................................................................................................................................2411.0010010000000
.....................................................................AAGACGTAGAAC-ACCATGTGCGGAGT.............................................................................................................2611.0010100000000
.............................................................................................................TAGTTGTGGTTCC----TTT-CCCCCTTAG..................................................................2511.0010100000000
..........................................................TTGGACAGGAAAAGACGTAGAAC-A..........................................................................................................................2431.0030100000200
....................................................................AAAGACGTAGAAC-ACCATGTGCGGAG..............................................................................................................2611.0010000000100
......................................................................................................TATT-AGTAGTTGTGGTTCC----TTT-...........................................................................2211.0010100000000
......................................................................................................TATT-AGTAGTTGTGGTTCC----TTT-C..........................................................................2311.0010100000000
.........................GCTCGCAAAGT---------------CTAGACGTTGGAC.............................................................................................................................................2411.0010100000000
................................................................................................TGGCCCTATT-AGTAGTTGTGGTTC....................................................................................2411.0010100000000
........................................................................................................TT-AGTAGTTGTGGTTCC----TTT-CC.........................................................................2211.0010100000000
....................................................................AAAGACGTAGAAC-ACCATGTGCGGAGC.............................................................................................................2711.0010010000000
..................................................................GAAAAGACGTAGAAC-ACCATGTGC..................................................................................................................2431.0030000000300
........TAAGATTAGTCAACAGCGCTCGCA.............................................................................................................................................................................2421.0020200000000
.....................................................................AAGACGTAGAAC-ACCATGTG...................................................................................................................2031.0030300000000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCCC.......................................................................2340.7530300000000
....................................................TAGACGTTGGACAGGAAAA......................................................................................................................................1930.6720200000000
...................................T---------------CTAGACGTTGGACAGGAAAAGA....................................................................................................................................2330.6720200000000
...................................................................AAAAGACGTAGAAC-ACCAT......................................................................................................................1930.6720200000000
...................................................................AAAAGACGTAGAAC-ACCATGTGA..................................................................................................................2330.6720100000100
....................................................................AAAGACGTAGAAC-ACCATGT....................................................................................................................2030.6720100100000
...................................T---------------CTAGACGTTGGACAGGAAAAG.....................................................................................................................................2230.6720200000000
....................................................................AAAGACGTAGAAC-ACCATG.....................................................................................................................1930.6720100000100
...................................................................AAAAGACGTAGAAC-ACCATGTGCT.................................................................................................................2430.6720000000200
.....................................................AGACGTTGGACAGGAAAAGACGT.................................................................................................................................2330.6720200000000
...........................................................TGGACAGGAAAAGACGTAGAAC-...........................................................................................................................2230.6720000000200
.............................................................GACAGGAAAAGACGTAGAAC-ACCATGT....................................................................................................................2720.5010000100000
.............................................................GACAGGAAAAGACGTAGAAC-ACCA.......................................................................................................................2420.5010100000000
........TAAGATTAGTCAACAGCGCTCGCAA............................................................................................................................................................................2520.5010100000000
...........................................................TGGACAGGAAAAGACGTAGAAC-ACCATG.....................................................................................................................2820.5010100000000
...........................................................................................................................................................................TG-------------TGCTGAAGATCAGTGAGTT2140.5020000000200
.............TTAGTCAACAGCGCTCGCAAAG..........................................................................................................................................................................2220.5010000000100
...................................T---------------CTAGACGTTGGACAGGAAAAGACGT.................................................................................................................................2630.3310100000000
...............................................................CAGGAAAAGACGTAGAAC-ACCATG.....................................................................................................................2430.3310100000000
....................................................TAGACGTTGGACAGGAAAAGAC...................................................................................................................................2230.3310000000100
.........................................................GTTGGACAGGAAAAGACGTAGAA.............................................................................................................................2330.3310100000000
............................................................GGACAGGAAAAGACGTAGAAC-AC.........................................................................................................................2330.3310100000000
...................................T---------------CTAGACGTTGGACAGGAAAAGACGA.................................................................................................................................2630.3310100000000
...................................................................AAAAGACGTAGAAC-ACCATGTGT..................................................................................................................2330.3310100000000
....................................................TAGACGTTGGACAGGAAAAGACGTA................................................................................................................................2530.3310000000100
................................................................AGGAAAAGACGTAGAAC-ACCATGTGC..................................................................................................................2630.3310000000100
...................................T---------------CTAGACGTTGGACAGGA.........................................................................................................................................1830.3310100000000
....................................................TAGACGTTGGACAGGAAAAGT....................................................................................................................................2130.3310100000000
...................................................................AAAAGACGTAGAAC-ACCATGTAA..................................................................................................................2330.3310100000000
....................................................................AAAGACGTAGAAC-ACCATGCAG..................................................................................................................2230.3310100000000
....................................................TAGACGTTGGACAGGAAAAG.....................................................................................................................................2030.3310100000000
..........................................................................................................................................................................TTG-------------TGCTGAAGATCAGTGAGT.2140.2510100000000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCC........................................................................2240.2510100000000
..............................................................................................................AGTTGTGGTTCC----TTT-CCCCC......................................................................2040.2510100000000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CC.........................................................................2140.2510100000000
..........................................................................................................................................................................TTG-------------TGCTGAAGATCAGTGAGTT2240.2510100000000
.............................................................................................................TAGTTGTGGTTCC----TTT-CCCC.......................................................................2040.2510100000000
...........................................................................................................AGTAGTTGTGGTTCC----TTT-CCCCC......................................................................2340.2510100000000
...............................................................................................................GTTGTGGTTCC----TTT-CCCC.......................................................................1840.2510100000000
...........................................................................................................AGTAGTTGTGGTTCC----TTT-CC.........................................................................2040.2510100000000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCCCC......................................................................2440.2510100000000
droPer2
G--GAAGATAAGATTAGTCAACAGCGCTCGCAAAGT---------------CTAGACGTTGGACAGGAAAAGACGTAGAAC-ACCATGTGCGGAGTTGGCCCTATT-AGTAGTTGTGGTTCC----TTT-CCCCCTTAGTATTGTTTTGCCG---TATTAAGTG-TTT--TTG-------------TGCTGAAGATCAGTGAGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................AAAAGACGTAGAAC-ACCATGTGC..................................................................................................................23111.55171241000
....................................................................AAAGACGTAGAAC-ACCATGTGCGG................................................................................................................2460.674220000
...GAAGATAAGATTAGTCAACAGCG...................................................................................................................................................................................2350.402020000
............................CGCAAAGT---------------CTAGACGTTGG...............................................................................................................................................1930.331010000
....................................................................AAAGACGTAGAAC-ACCATGTGCG.................................................................................................................2360.332020000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCCCCT.....................................................................2590.222020000
....................................................................AAAGACGTAGAAC-ACCATGTGCGGA...............................................................................................................2550.201010000
....................................................................AAAGACGTAGAAC-ACCATGTGCGGAGT.............................................................................................................2750.201010000
...........................................................................TAGAAC-ACCATGTGCGGAGTTGG..........................................................................................................2350.201010000
...GAAGATAAGATTAGTCAACAGCGC..................................................................................................................................................................................2450.201010000
...................................................................AAAAGACGTAGAAC-ACCATGTG...................................................................................................................22110.182020000
....................................................................AAAGACGTAGAAC-ACCATGTGC..................................................................................................................22110.182020000
...................................................................AAAAGACGTAGAAC-ACCATGTGCGG................................................................................................................2560.171010000
...................................................................AAAAGACGTAGAAC-ACCATGTGCG.................................................................................................................2460.171010000
...................................................................................................................................................TGCCG---TATTAAGTG-TTT--TTG-------------TGCT...............2470.141000001
...........................................................TGGACAGGAAAAGACGTAGAAC-ACCA.......................................................................................................................2680.131010000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCCCCTTA...................................................................2790.111010000
.........................................................................................................T-AGTAGTTGTGGTTCC----TTT-CCCCC......................................................................24100.101010000
...................................................................AAAAGACGTAGAAC-ACCATGT....................................................................................................................21110.091010000
...................................................................AAAAGACGTAGAAC-ACCATGTGCCA................................................................................................................25110.091100000
.....................................................................AAGACGTAGAAC-ACCATGTGC..................................................................................................................21110.091010000
...................................................................AAAAGACGTAGAAC-ACCATGTGA..................................................................................................................23110.091100000
droKik1
GCAGAAGATAGTG-GATCCGACGGAGCTCGCTGGAA--GTAGCA-ATCGATCTCGGA-GT--A-GGCAAGAGACGTGAAAA-AGCAGGAG-GCAGTTGGCTCCGGCATGGCATCATT---T----TTTTTCCCCTT---TGTTGT----CCAG---ATAGAGTTGTTT--TTG-------------T------------TGTGTTSizeHit CountTotal NormTotal
No Reads
droFic1
GCAGAAGATAGTG-GATCCGATGGAGCTCACAAATA--TGAA--CATTGATCCTGGCGTT--A-GGCAGATGACGCAGAAAAAGCGGGTG-GTGTTTGGCTCCGGTTAAGTGTCAGTA--T----TTTCTCCCCCCTCTTATCGT----CCAA---TTTGAGTT-GTT--TGG-------------TGTTTGATATC--------SizeHit CountTotal NormTotal
No Reads
droEle1
G--GAAGATGGGA-TGGTCAACAGCGCTCACCGAGAA----A---------CTT-GTGCTGGT-AAATGAAGACACTGAAA-TCCGGTGGTGAAGTTGGCTCCGTT-GAATGTTGAG---T----TTTTCCCTCCCTGTTGTAGT----TGAA----TTGTGTTTATT--TTG-------------TTCAAGGTGTCATTGT-GTSizeHit CountTotal NormTotal
No Reads
droTak1
G--GAAGATGGGA-TGGTCAACAGCGCTCACCGAGAA----A---------CTT-GTGCTGGA-AATAGAAGACACTGAAA-TCCGGGGGTGAAGTTAGCTCCGGT-GAATGTAGTG---T----TTGTCCCTCCCTGTTGTAGT----T--------GTGCTT-ATTTTTTG-------------T--TC---------GAGGTSizeHit CountTotal NormTotal
No Reads
droYak3
GAAGAAGATAGAG-GATCCGATGGAGCTCGCCATGGCAT--ACAACTCGATCGCAGAGGT--A-GATGAAAGACGCAGGAA-AGCATGTG-GAAGTTGGCTCCGGTTAGGCATCACT---CCTTTTTTTTCCCCCCTTTTGTTGT----CCAA----TTGAGTT---T--CCG-------------T------------TT-TTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................ACAACTCGATCGCAGAGGT--A-GATG.........................................................................................................................................2436.0018000000000018
...........................................................................CAGGAA-AGCATGTG-GAAGTTGGC.........................................................................................................2384.2534029400010000
......................................T--ACAACTCGATCGCAGAGGT--A-GA...........................................................................................................................................2343.251307000000006
................................ATGGCAT--ACAACTCGATCGCAGAGG..................................................................................................................................................2553.0015040000100010
..............................................................................................................................................TGT----CCAA----TTGAGTT---T--CCG-------------T------------TT-TTT2482.0016000000000016
...........................................................................CAGGAA-AGCATGTG-GAAGTTGG..........................................................................................................2281.00808000000000
................................ATGGCAT--ACAACTCGATCGCAGAGGT--...............................................................................................................................................2641.00402100010000
...........................................................................CAGGAA-AGCATGTG-GAAGTTGGCTC.......................................................................................................2581.00805300000000
GAAGAAGATAGAG-GATCCGATGGA....................................................................................................................................................................................2490.89800000000008
...........................................................................CAGGAA-AGCATGTG-GAAGTTGGCTCC......................................................................................................2660.83503200000000
................................ATGGCAT--ACAACTCGATCGCAGAG...................................................................................................................................................2450.80401010020000
......................................................................................TGTG-GAAGTTGGCTCCGGTTAGGCA.............................................................................................2570.71505000000000
................TCCGATGGAGCTCGCCATGGCA.......................................................................................................................................................................2260.67404000000000
..........................................................................................................TAGGCATCACT---CCTTTTTTTTCCCCCCT....................................................................2830.67201100000000
...........................................................................CAGGAA-AGCATGTG-GAAGTTGGCT........................................................................................................2480.63505000000000
................................ATGGCAT--ACAACTCGATCGCAGA....................................................................................................................................................2350.60303000000000
........................................................................................TG-GAAGTTGGCTCCGGTTAGGCATCAC.........................................................................................2780.25202000000000
...........................................................................CAGGAA-AGCATGTG-GAAGTTG...........................................................................................................2180.25201001000000
.......................................................................GACGCAGGAA-AGCATGTG-GAAGTTGGC.........................................................................................................2780.25201100000000
................................ATGGCAT--ACAACTCGATCGCAGAGGT--A-.............................................................................................................................................2740.25101000000000
.......................................................................GACGCAGGAA-AGCATGTG-GAAGTTGG..........................................................................................................2680.25202000000000
......................................T--ACAACTCGATCGCAGAGGT--A-GT...........................................................................................................................................2340.25101000000000
GAAGAAGATAGAG-GATCCGAT.......................................................................................................................................................................................2190.22200000000002
.................................TGGCAT--ACAACTCGATCGCAGAGG..................................................................................................................................................2450.20101000000000
................TCCGATGGAGCTCGCCATGGCAT--ACA.................................................................................................................................................................2650.20101000000000
...................GATGGAGCTCGCCATGGCAT--ACAACTCGA...........................................................................................................................................................2950.20100100000000
.................................TGGCAT--ACAACTCGATCGCAGA....................................................................................................................................................2250.20101000000000
..........GAG-GATCCGATGGAGCTCGCCAT...........................................................................................................................................................................2360.17101000000000
................TCCGATGGAGCTCGCCATGGC........................................................................................................................................................................2160.17101000000000
................TCCGATGGAGCTCGCCATGGCAT--A...................................................................................................................................................................2460.17100100000000
...........AG-GATCCGATGGAGCTCGCC.............................................................................................................................................................................2060.17101000000000
..........GAG-GATCCGATGGAGCTCGCCATGGC........................................................................................................................................................................2660.17101000000000
..........GAG-GATCCGATGGAGCTCGCCATGGCA.......................................................................................................................................................................2760.17101000000000
............................................................................AGGAA-AGCATGTG-GAAGTTGGCTCC......................................................................................................2560.17101000000000
......................................................................................TGTG-GAAGTTGGCTCCGGTTAGGCAA............................................................................................2670.14100000010000
.......................................................................................GTG-GAAGTTGGCTCCGGTTAGGC..............................................................................................2370.14101000000000
......................................................................................TGTG-GAAGTTGGCTCCGGTTAGG...............................................................................................2370.14100010000000
................................................................................A-AGCATGTG-GAAGTTGGCTCCGAC...................................................................................................2470.14100100000000
.......................................................................................GTG-GAAGTTGGCTCCGGTTAGGCA.............................................................................................2470.14101000000000
................................................................................A-AGCATGTG-GAAGTTGGCTCCGG....................................................................................................2370.14101000000000
.............................................................................GGAA-AGCATGTG-GAAGTTGGCTCCGG....................................................................................................2670.14100100000000
...............................................................................AA-AGCATGTG-GAAGTTGGCTCCGG....................................................................................................2470.14101000000000
....................................................................................CATGTG-GAAGTTGGCTCCGGTTAGG...............................................................................................2570.14101000000000
....................................................................................................TCCGGTTAGGCATCACT---CCTTT................................................................................2270.14101000000000
......................................................................................TGTG-GAAGTTGGCTCCGGTTAGGCATC...........................................................................................2770.14100100000000
.........................................................................CGCAGGAA-AGCATGTG-GAAGTTGG..........................................................................................................2480.13100100000000
...............................................................................................................................................GT----CCAA----TTGAGTT---T--CCG-------------T------------TT-TTT2380.13101000000000
...............................................................................................................................................GT----CCAA----TTGAGTT---T--CCG-------------T------------TT-...2080.13101000000000
.........................................................................CGCAGGAA-AGCATGTG-GAAGTTGGC.........................................................................................................2580.13100100000000
...........................................................................................................................................TGTTGT----CCAA----TTGAGTT---T--CCG-------------T------------T.....2380.13101000000000
.........................................................................................................................................TTTGTTGT----CCAA----TTGAGTT---T--CCG-------------T------------T.....2580.13101000000000
............................................................................AGGAA-AGCATGTG-GAAGTTGGC.........................................................................................................2280.13101000000000
........................................................................................TG-GAAGTTGGCTCCGGTTAGGCATCACT---.....................................................................................2880.13101000000000
...............................................................................................................................................GT----CCAA----TTGAGTT---T--CCG-------------T------------TT-TT.2280.13101000000000
.AAGAAGATAGAG-GATCCGATGGAGCT.................................................................................................................................................................................2690.11100100000000
.............................................................................GGAA-AGCATGTG-GAAGTTGGC.........................................................................................................2190.11101000000000
droEre2
GAAGAATATAGAG-GATCCGATGGAGCTCGCGAAGAC----ACATTTCAATCTAGGATGT--A-GGTAGACGACGCAGAAA-AGTATCTG-TAAGTTGTCTCAGGC-----ATCACT---CC----TTTACCCCCCTATTGTTGT----TCAATTTAGTGATTT-TTT--TGGTTTTGTTGTTTTCGGCTAGAAATAATAAATGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 02:56 PM