ID:

dps_1743

 Coordinate:

Unknown_group_101:9772-9922 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.1 -5.0 -4.9

Flybase annnotation

CDS [Dpse\GA23327-cds]; exon [dpse_GLEANR_11982:3]; intron [Dpse\GA23327-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron-
Hovi2DNAhAT-hobo-
mature
  1. dps_1743  Unknown_group_101:9793-9811 -
  2. Unknown_group_297:5471-5489 +
  3. Unknown_singleton_282:576-594 -
star
  1. Unknown_group_555:8225-8245 +
  2. Unknown_group_46:6775-6795 +
  3. 3:2437017-2437037 +
  4. 3:3199731-3199751 +
  5. 3:11530546-11530566 +
  6. 3:18710635-18710655 +
  7. 2:5733447-5733467 +
  8. 2:11562928-11562948 +
  9. 2:15513679-15513699 +
  10. 2:21859632-21859652 +
  11. XL_group3a:1946923-1946943 +
  12. Unknown_group_845:499-519 +
  13. Unknown_singleton_2012:4256-4276 +
  14. XR_group6:3903827-3903847 +
  15. XL_group1a:3606480-3606500 +
  16. Unknown_singleton_1063:587-607 +
  17. Unknown_singleton_727:1296-1316 +
  18. Unknown_singleton_3190:466-486 +
  19. Unknown_group_659:2747-2767 +
  20. Unknown_singleton_1980:135-155 +
  21. dps_1743  Unknown_group_101:9850-9870 -
  22. Unknown_group_552:2314-2334 -
  23. Unknown_group_552:9311-9331 -
  24. Unknown_singleton_1403:23029-23049 -
  25. XL_group1e:7602116-7602136 -
  26. Unknown_group_21:33218-33238 -
  27. Unknown_group_128:11644-11664 -
  28. Unknown_group_204:2165-2185 -
  29. Unknown_group_204:17604-17624 -
  30. 3:7168863-7168883 -
  31. 3:8177148-8177168 -
  32. 3:14014698-14014718 -
  33. 2:4854681-4854701 -
  34. XR_group8:6917937-6917957 -
  35. Unknown_group_472:9776-9796 -
  36. XR_group6:12513217-12513237 -
  37. XL_group1a:44260-44280 -
  38. XL_group1a:302443-302463 -
  39. XL_group1a:1361374-1361394 -
  40. XL_group1a:7715431-7715451 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGCGTGATAACAGCAAGAACCTTAAATTTATGGATGAATCACAGAAGGCGTAAGTTTTTACATCCGATACTCAAAGAGTATAGAGACATATTAGTTTTGCGTTTCCGACCCCATAAAGTATATGATTCTTGATAAGTATTAATAGCCGAGTCGATATAGCCATGTCTGCCTGTCCGTCCGTCTATTCGTCTATTTTGTCGCCAAGTTCTTAAAGAATTTATATGCTAGATCAACTAAATTAAGTGTGCAG
******************************************************************************************************..........(((....(((((((((((((((....))))).....))))).)))))...)))...............*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 SRR902012
CNS imaginal disc
 SRR902011
testis
 M040
female body
 GSM343916
embryo
 GSM444067
head
.............................TATGGATGAATCACAGAAGGCGAGA..................................................................................................................................................................................................... 25 2 1 8.00 8 6 0 1 1 0 0
...........................TTTATGGATGAATCACAGAAGGCGT....................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0
............................TTATGGATGAATCACAGAAGGCGAGA..................................................................................................................................................................................................... 26 2 1 2.00 2 1 1 0 0 0 0
............................TTATGGATGAATCACAGAAGGC......................................................................................................................................................................................................... 22 0 1 2.00 2 0 1 0 0 1 0
.............................TATGGATGAATCACAGAAGGCGT....................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0
............................TTATGGATGAATCACAGAAGGCGTT...................................................................................................................................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
..............................ATGGATGAATCACAGAAGG.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
...............................TGGATGAATCACAGAAGGCGAGA..................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................TTATGGATGAATCACAGAAGGCGT....................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................CATGTCTGCCTGTCCGTCC....................................................................... 19 0 3 0.33 1 0 0 1 0 0 0
..............................................................................................................................................................AGCCATGTCTGCCTGTCCGTC........................................................................ 21 0 6 0.17 1 0 0 0 1 0 0
.................................................CGTAAGGTTTAATATCCGA....................................................................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 1
......................................................................................................TTTCCGACCCCATAAAGTATA................................................................................................................................ 21 0 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

CGCGCACTATTGTCGTTCTTGGAATTTAAATACCTACTTAGTGTCTTCCGCATTCAAAAATGTAGGCTATGAGTTTCTCATATCTCTGTATAATCAAAACGCAAAGGCTGGGGTATTTCATATACTAAGAACTATTCATAATTATCGGCTCAGCTATATCGGTACAGACGGACAGGCAGGCAGATAAGCAGATAAAACAGCGGTTCAAGAATTTCTTAAATATACGATCTAGTTGATTTAATTCACACGTC
***********************************************************************..........(((....(((((((((((((((....))))).....))))).)))))...)))...............****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 SRR902011
testis
 M059
embryo
 GSM444067
head
...............................................................................................AAAAAGCAAAGGCTGGGGT......................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
................................................................................................AAAAGTAAAGGCTGGGGTATTTCATATA............................................................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................TCAGCTATATCGGTACAGATGT................................................................................ 22 2 13 0.77 10 8 0 0 0 1 1
.......................................................................................................AAGGCTGGGGTATTTCATATA............................................................................................................................... 21 0 20 0.35 7 7 0 0 0 0 0
....................................................................................................GCAAAGGCTGGGGTATTTC.................................................................................................................................... 19 0 20 0.30 6 0 0 0 6 0 0
.................................................................................................AAAGCAAAGGCTGGGGTATTTCATATA............................................................................................................................... 27 1 11 0.27 3 3 0 0 0 0 0
.......................................................AAAAATGTAGGCTAAGGGT................................................................................................................................................................................. 19 2 6 0.17 1 0 0 1 0 0 0
.......................................................................................................AAGGCTGGGGTATTTCATA................................................................................................................................. 19 0 20 0.15 3 0 0 3 0 0 0
.................................................................................................................................................CGGCTCAGCTATATCGGTACA..................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................AAAGTAAAGGCTGGGGTATTTCATAT................................................................................................................................ 26 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................CAGATAAACAGAGACAACAG................................................... 20 3 20 0.05 1 0 1 0 0 0 0
..................TTGCAATTTAAATAGATACT..................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................GGCTCAGCTATATCGGTACAG.................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_101:9722-9972 - dps_1743 GCG-CGTGATAACAGC---AAGAA----------C-----------CTTAAATTTATG------GAT------------G----AA--------------------TCACAGAAGGCGTAAGT-------TTTTACATCCGATACTCAAAG------AGT-ATAGAGACATATTAGTTTTG-----------------------------CGTTTCCGACCCCATAAAGTATATG-ATTCTTGATAAGTATTAATAGCCGAGTCGATATAGCC------------------------ATGTCTGCCTGTCCGTCCGTCTATT----CGTC------------TATTTTGTCGCCAAGTTCTTAAAGAATTTATATGCTAGATCAAC-TAAATTAAGTGTGC--AG
droPer2 scaffold_90:130586-130836 + dpe_2188 GCA-CGTGATAACAGC---AAGAA----------C-----------CTTAAATTTATG------GAT------------G----AA--------------------TCACAGAAGGCGTAAGT-------TTTTACACCCGATACTCAAAG------AGT-ATAGAGACATATTAGTTTTG-----------------------------CGTTTCCGACCCCATAAAGTATATG-ATTCTTGATAAGTATTAATAGCCGAGTCGATATAGCC------------------------ATGTCTGCCTGTCCGTCCGTCTATT----CGTC------------TTTTTTGTCGCCAAGTTCTTAAAGAATTTATATGCTAGAGCAAC-TAAATTAAGTGTGC--AG
droWil2 scf2_1100000004852:268905-269179 - TCT-TGCAACAATAAG---AATAA----------G-----------ATCAAATTTA-----------------------------AT--GAATTAA-----TGTAA--------------CGT-------AATTATACCATACACCCATAT------GGT-GAAATGGTATATTAAAGTCGCCAAAATGTATGTAACAGGCAGAAGGAAGC--ATCCGACCCCACAAAGTATATATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCC------------------------ATGTCCGTCTGTCCGTCCGTCCGTCCGCCCGTC------------CGTATGAACACCTAGATCTCGGAGACTATAAGAGCTAGACCCAC-CAAATTTGGTATGC--AG
droVir3 scaffold_4718:1278-1526 + GCG-CACTAAAACAGC---AAGAG----------A-----------GA------------------------------------------AAGAAATACA---TAT--------------GAT-------TTTTATACCCTGAACCCATTAAAAATGGGT-ATAAGGGTATATTGTATTTGTGCAAAAT--------------------------C---------CAAATGTATGTATTCTTGATCAGCACCAATAACCGAGTCGATCTAGCC------------------------ATGTCCGTCTGTCTGTCCGTCCGTC----CGTCCGTCCGTCCGTATGTATGAACGCAAGGATCTCAGAACCTATAAGAGCTAGAGACTT-GAAATTTTAGATGTAGAT
droMoj3 scaffold_6540:2824267-2824543 - AAT-TGTGTCAACGGT-----GAA----------T-----------CTTAAATGTAAA-------------------ATT----CA--------------------TCA-AGCAGTTGCAAGC-------AATCATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTGAAAAAGTATGTAACGGGCAGAAGGCGTCATCGCAGACCCCATAAAGTATATATATTCTTGATCTGGGCGACGAGCCGAGTCGATTTAGCT------------------------CTGTCCGTCTGTCCGTCCGTC--------CGTA------------TGTTTGAACGCGTCGATCTCAGAAGATATAAGAGCTAGAAACTT-GAC--T-AGAGACT--AG
droGri2 scaffold_15116:1342016-1342324 + GTG--GTGATAACAGG-----GGATTTTCAACCGCAAAACAAATATCACAAATTTATGATGTCCGAT------------G----AT--------------------TTAAT-------TAAACATTTAGTTATTATACTCTGAACCCATTAAAAATGGGTAAAAATGGTATAATGGTTTTGTGCAAATGTATATAACAGGCAGAAG-AAACATCTCCGACCCCATAAAGTATATATATTCCTGATCAGGGTCAACAGCCGAGTCGATAGAGCCA----------------------CATATCCGTCTGTCCGTCCGTA--------CGTC------------TGTATGGACACACAGATCTGAGAGAATATAAAAGCCAGAGACTT-CAAATTTGAAATAG--AG
droAna3 scaffold_12926:267534-267745 + TTG-TAAGATCACCGT---AAAAA--------------------------------------------------------------------CAAATACAT-TATT-ATAA---------TTT----AG-TAT-------------TATAA------TAT-A-TAAGGTATTATAATTTTGGT-AAAAGAGTGCAACGCAGAAAAAGAGACATATCCGACCTCATAAAGTATACATATTCCTGATCAGGATCACCTCCTGTGTCGATATAAGC------------------------ATGTCCGTCTGTCCGTCCGTCTGTC----CGTC------------CGTCTGTCTGCCTGTCTCTT-------------------------------------------
droBip1 scf7180000395161:6186-6408 - TGG-TAAA--AATACC---A---A----------G-----------TTTAAAGTTTTT------GAA------------G----AC--------------------TCGTT------GGGACT-------CTTTATACCCGGTTCTCGTGG------AGT-ACAAGGGTACATTGAA--------------------------------TCATCTCGGACCCCA-AAAGTACATATATTCTTGATCAGCACCAACAGCCGAGTCGATATAGCT------------------------ATGTCCGTCTGTCCGTCCG------------TC------------CGTATGAACGCGTGGATCTCAGAGACTATAAGAGATGGAGCTT-------TTGAAATAG--AG
droKik1 scf7180000298030:7277-7454 - TA----------------------------------------------------------------------------------------------------------------------TAT-------TTTTATACCC-----TTGC---------------AGGGTATTCAAATTTCAGT-----------------CA------GACCCTTTCGACTCTATAAAGTGTATTTATTCTTGATCAGCATCAACAGTCGAGTTGATCTAGCC------------------------ATGTCCGTCTGTCCGTTTCTACGCA----AACTAGTCCCTC----AGTT------------------------TTAAAGCTATCTGAAT-GAAACTTTGCATAT--AG
droFic1 scf7180000454073:3653505-3653686 - CTG-AA---------------------------------------------AGTTTTG------AAA------------T----AA--------------------TTATTAA----AGTAGT-------TTTTATACCC-----TTGCAG------AGC-AAAAGGGTATTTTAA---------------------GGAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGAGCAGAATCGGAATCCGC------------------------CTGTACGTCTGTCCGTCTGTCCATC----TGTC------------CATCTGTCCGTC---------------------------------------------------
droEle1 scf7180000490073:15496-15772 - GGC-------AATAGC---AAG------------C-----------CATAACTCTTAG------AGCTGTTTACAAAAT-GCTTAAG--TATTAAA-----GCTTT--------------CAT-------TATTATACCCGTTACTCGTAG------ATT-AAAGGGTTATATTATAATCATTGCATAATAAGTAACATGTAGAAGGA-ACGATTTCGACCCTTAAAAGAA--TATATTCTTGATCAGGATCAATACCCGACTGGATCTAGCC------------------------ATCCCTGTCTGTCTGTCC------------GTC------------TGTATGAGCGTCGAGGTCTCGGAAACTATAAAAGCTAGAGATTTCGGAATTTGACATGC--AG
droRho1 scf7180000766880:166383-166649 + GGC-CAATATTGTGGC---TTGAA-------------------------AA--------------------------AT-TTTTAAT--CAAAAAG-----GCTAT--------------TAT-------TTTTATACCCGTTACTCGTAG------AGT-AAAAGGGTATATTGTATTCGTTGAAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATATAGCC------------------------ATGTCCGTCTGTCCGTCTGTC--------CGTC------------CGTATGAACGCTGAGATCTCGGAAACTATAAAAGCTAGAAGATT-GGCATTTTGCATGC--AG
droBia1 scf7180000302087:358023-358261 + AGA-AA---------------AAA----------C-----------TGAAAAAAAATG------AAA------------A----CA--------------------TCATATTAAG-GTATAT-------ATTTATAACCGTTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGACA---------------------------GAGTACAATACAGTAAAGTA--TACAATCTTGTTCAGGATCAATAGCATAGTCGATCTATCC------------------------ATGTCCGTCTGTCCATTTGTCCGTC----CGTC------------CGTATGAACGCTGAGATCTTGGAAACTATAAAAGCTATAAGTTT-GACATTTGGTATGT--AG
droTak1 scf7180000412538:7980-8253 + GAGAAATGGCAAAAGA---AAGAA----------T-----------TTAAATA------------------------AA-----------AACAAA----------TCCAATTTGG-GGTCGT-------TTTTATACCCGTTACTCGTAG------AGT-AAAAGGGTATATTAGATTCGTGCAAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAACTATATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCC------------------------ATGTCCGTCTGTCCGTCTGTC--------TGTC------------TGTATGAACGCTGAGATCTCGGAAACTATAAAAGCTAGAGGATT-GACATTTTGCATGC--AG
droEug1 scf7180000409551:273504-273767 + TA---------AGAGC---ACGAATGTGTTT---C-----------CTTAGATATAAA------A------------CTATG--TATCGAAACAAA-----TCTAA--------------TAT-------ATTTATACCCGTTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGTTGAAAAGTATGTA-----------------------ACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCC------------------------ATGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTC------------CGTATGAACGCTGAGATCTCAGGAACTATAGCAGATAGAAAGTT-GAGATTAAGCATGA--AG
dm3 chr3L:22995855-22996106 - GCG-AAGGAAAGCAGTGAAGAGAA----------A-----------CTGAAAA------------------------TAATGTAATG--TAATGGA-----GGTGG--------------TAT-------TTTTATACCCGTTACTCGTAA------AGT-AAAAGGGTATACCAGATTCGTTGAAAAGCATGTAACAGACAGA----AGCGTTACCGACTATATAAATTATATATATTCTTGATCAAGATCAATAGCCGAGTCAAACTGACC------------------------ATGCCC------------------------GTT------------CGTATGAGCGCAGAGTTCTCAGAAACTATTGAAGCTAGAA------AGATTAAGCATAC--AG
droSim2 3l:17796641-17796930 - TTT-AATT--AATATC---AAAAA----------T-----------TTTTTTATAATA------CAT------------T----AT--------------------TTAGAGCAATTGAAAAT-------ATTTATGACCGTTACTCGTAG------AGT-AAAAGGCTATACAAAATTCGTTGAA---------TCAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTACATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGATCAAAGACACTAGAATATTATTGACCCTGTCCGCCCGTCTGCCTTTC--------CGTC------------CGTATAAACGTCGAGATCTCAAGAACTATAAAAGCTATAAGGTC-GGGAATAAGCATAC--AG
droSec2 scaffold_20:807344-807564 + CTT-AA---------------------------------------------CTATTTA------AAT------------A----AA----ACACAACACAT-ATTT--------------TTT-------AATTATACCCGTTACTTGTAG------AGT-AAACGGCTATACTAGATCC-------------------------------GTTTTCGACTATATAAAGTATATATATTCTAGATCAGGATTAATAGCCGAGTCGGTCTGTCC------------------------ATGGCCATCTGTTCGTC-------------GTC------------GGTATGAATGTCGAGATCTCAGGAATTATAAAAGCTATAAGGTT-GAGATTCGGCATAC--AG
droYak3 v2_chr2h_random_021:55272-55521 + GGT-------AACAGA---ATGAA----------T-----------CTTTATTTACAG------AA------------------------------------------------------------------------TAATTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGTTGAAAAGTATGTAACAGGCAGAAAAAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCC------------------------ATGTGCGTCTGTCCGTCCGTCTGTCTGTCCGTC------------CGTATGAACGCTGAGATCTCAGGAACTACAATAGCTAGATAGTT-GAGATTCGGCATAC--AG
droEre2 scaffold_4784:25040206-25040483 + ACA-TTAAAGAGCAGA---TAAAA----------C---------TTTAAAAGTTCCTGAGAGACTAT---------------------------------------TCTCAAA----TTGAAT-------AATTATACCCGTTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGTTGAAAAGTATGTAATAGGCAGAAGAAAACGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGGCGAGTCGATCTGGCC------------------------AAGTCCGTTTGTCCGTCCGTC--------TGTT------------CGTATGAAAGCCTCGATCTCAGGAACTACAAAAGCTAGAATGTT-GAGATTAAGCATGC--AG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCG-CGTGATAACAGC---AAGAA----------C-----------CTTAAATTTATG------GAT------------G----AA--------------------TCACAGAAGGCGTAAGT-------TTTTACATCCGATACTCAAAG------AGT-ATAGAGACATATTAGTTTTG-----------------------------CGTTTCCGACCCCATAAAGTATATG-ATTCTTGATAAGTATTAATAGCCGAGTCGATATAGCC------------------------ATGTCTGCCTGTCCGTCCGTCTATT----CGTC------------TATTTTGTCGCCAAGTTCTTAAAGAATTTATATGCTAGATCAAC-TAAATTAAGTGTGC--AGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................TTTATG------GAT------------G----AA--------------------TCACAGAAGGCGT..............................................................................................................................................................................................................................................................................................2512.0020000000020
.....................................................TTATG------GAT------------G----AA--------------------TCACAGAAGGC................................................................................................................................................................................................................................................................................................2212.0020000100001
......................................................TATG------GAT------------G----AA--------------------TCACAGAAGGCGT..............................................................................................................................................................................................................................................................................................2312.0020000000200
.....................................................TTATG------GAT------------G----AA--------------------TCACAGAAGGCGTT.............................................................................................................................................................................................................................................................................................2512.0020000000002
.......................................................ATG------GAT------------G----AA--------------------TCACAGAAGG.................................................................................................................................................................................................................................................................................................1911.0010000000001
.....................................................TTATG------GAT------------G----AA--------------------TCACAGAAGGCGT..............................................................................................................................................................................................................................................................................................2411.0010000000001
................................................................................................................................................................................................................................................................................C------------------------ATGTCTGCCTGTCCGTCC..........................................................................................1930.3310000000010
.............................................................................................................................................................................................................................................................................AGCC------------------------ATGTCTGCCTGTCCGTC...........................................................................................2160.1710100000000
....................................................................................................................................................................................................................TTTCCGACCCCATAAAGTATA............................................................................................................................................................................21200.0510000000010
droPer2
GCA-CGTGATAACAGC---AAGAA----------C-----------CTTAAATTTATG------GAT------------G----AA--------------------TCACAGAAGGCGTAAGT-------TTTTACACCCGATACTCAAAG------AGT-ATAGAGACATATTAGTTTTG-----------------------------CGTTTCCGACCCCATAAAGTATATG-ATTCTTGATAAGTATTAATAGCCGAGTCGATATAGCC------------------------ATGTCTGCCTGTCCGTCCGTCTATT----CGTC------------TTTTTTGTCGCCAAGTTCTTAAAGAATTTATATGCTAGAGCAAC-TAAATTAAGTGTGC--AGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................AA----------C-----------CTTAAATTTATG------GAT------------G----AA--------------------T..........................................................................................................................................................................................................................................................................................................2211.001001000
................................................................................................................................................................................................................................................................................C------------------------ATGTCTGCCTGTCCGTCCGTC.......................................................................................2280.131100000
..............................................................................................................................................................................................................................................................TAGCCGAGTCGATATAGCC------------------------ATGT........................................................................................................23200.051000001
droWil2
TCT-TGCAACAATAAG---AATAA----------G-----------ATCAAATTTA-----------------------------AT--GAATTAA-----TGTAA--------------CGT-------AATTATACCATACACCCATAT------GGT-GAAATGGTATATTAAAGTCGCCAAAATGTATGTAACAGGCAGAAGGAAGC--ATCCGACCCCACAAAGTATATATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCC------------------------ATGTCCGTCTGTCCGTCCGTCCGTCCGCCCGTC------------CGTATGAACACCTAGATCTCGGAGACTATAAGAGCTAGACCCAC-CAAATTTGGTATGC--AGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................TTCTTGATCAGGATCAACAACCGAGT..............................................................................................................................................26200.20404000
....................................................................................................................................................TAT------GGT-GAAATGGTATATTAAAGTCGC...............................................................................................................................................................................................................................27160.19300030
..................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCTAGACCCAC-CAAATTTGG.........2560.17101000
.................................................................................................................................................................................................................................................................................................................................CCGCCCGTC------------CGTATGAACACCTAGATC.............................................2790.11110000
................................................................................................................................................................................................................................................TTGATCAGGATCAACAACCGAGT..............................................................................................................................................23200.10200020
....................................................................................................................................................................................................................................................TCAGGATCAACAACCGAGTCGAT..........................................................................................................................................23200.10202000
......................................................................................................................................................................................................................................................................TCGATCTAGCC------------------------ATGTCCGTCTGTCCGTC...........................................................................................28200.10200020
....................................................................................................................................................TAT------GGT-GAAATGGTATATTAAAGTCG................................................................................................................................................................................................................................26170.06100100
...................................................................................................................................................ATAT------GGT-GAAATGGTATATTAAAGT..................................................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................................................................................AGTATATATATTCTTGATCAGGAT..........................................................................................................................................................24200.05101000
.........................................................................................................................................................................ATATTAAAGTCGCCAAAATGTATGTA..................................................................................................................................................................................................................26200.05100010
...........................................................................................................................................................................ATTAAAGTCGCCAAAATGT.......................................................................................................................................................................................................................19200.05100010
...............................................................................................................................................................................................................................................................AACCGAGTCGATCTAGCC------------------------ATGTCC......................................................................................................24200.05101000
.........................................................................................................................................................................................................................................................ATCAACAACCGAGTCGATCTAG......................................................................................................................................22200.05101000
droVir3
GCG-CACTAAAACAGC---AAGAG----------A-----------GA------------------------------------------AAGAAATACA---TAT--------------GAT-------TTTTATACCCTGAACCCATTAAAAATGGGT-ATAAGGGTATATTGTATTTGTGCAAAAT--------------------------C---------CAAATGTATGTATTCTTGATCAGCACCAATAACCGAGTCGATCTAGCC------------------------ATGTCCGTCTGTCTGTCCGTCCGTC----CGTCCGTCCGTCCGTATGTATGAACGCAAGGATCTCAGAACCTATAAGAGCTAGAGACTT-GAAATTTTAGATGTAGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................TTAAAAATGGGT-ATAAGGGTATAT........................................................................................................................................................................................................................................24202.15430000000000000000000000000043000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GAGACTT-GAAATTTTAGATGTAGAT25201.55310000000000000000000000000000000000300000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GAGACTT-GAAATTTTAGATGTAGA.24201.2024000000002000000000000000090400100080000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TATGTATGAACGCAAGGATCTCAG.........................................24200.55110000000000000000000000000100000000100000000000000000000000000000
............................................................................................................................................................................................T--------------------------C---------CAAATGTATGTATTCTTGATCAGCA...........................................................................................................................................................2720.501000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................TTAAAAATGGGT-ATAAGGGTATATT.......................................................................................................................................................................................................................................25200.50100000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................T--------------------------C---------CAAATGTATGTATTCTTGA.................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAGAGACTT-GAAATTTTAGATGTAG..25200.459000000000000000000000000000000000090000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATGTCC......................................................................................................25200.408000000000000000000004000000040000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAACCGAGTCG............................................................................................................................................28120.334000000000000000000000000000002000020000000000000000000000000000
....................................................................................................................................................TTAAAAATGGGT-ATAAGGGTATATTGTA....................................................................................................................................................................................................................................28200.306000000000000000000000000000000000060000000000000000000000000000
..............................................................................................................................................................................................................................................TCTTGATCAGCACCAATAACCGAGTCG............................................................................................................................................27120.253000000000000000000000000000000000030000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAACCGAG...............................................................................................................................................25120.253001000000000000000000000000000000020000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GAGACTT-GAAATTTTAGATGTA...22200.255000000000000000000000000005000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAACCGAGT..............................................................................................................................................26120.253000000000000000000000000000002000010000000000000000000000000000
.....................................................................................................................................................................................................................................TGTATGTATTCTTGATCAGCA...........................................................................................................................................................2150.201010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ACCGAGTCGATCTAGCC------------------------ATGTCCGT....................................................................................................25200.204000000000000000000002000000020000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TATGTATGAACGCAAGGATCTCAGAACC.....................................28200.204000000000000000000000000000004000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAGAGACTT-GAAATTTTAGATGTAGA.26200.204000000000000000000000000003010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTGTCCGTCCGTC----CGTCCGTCCGT....................................................................24200.204000000000000000000000000000000000000000000000000000000000000004
..........................................................................................................................................................................................................................................................................................................................................................TGAACGCAAGGATCTCAGAAC......................................21200.204000000000000000000002000000020000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CCGTCCGTATGTATGAACGCA...................................................21200.204000000000000000000000000000000000000000400000000000000000000000
..................................................................................................................................................................................................................................................................CGAGTCGATCTAGCC------------------------ATGTC.......................................................................................................20200.204000000000000000000004000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CCGTCCGTATGTATGAACGCAAGGATC.............................................27200.204000000000000000000000000000000000000000000000000000000000000004
............................................................................................................................................................................................................................................................................................................................................TCCGTCCGTATGTATGAACGCAAGGATC.............................................28200.204000000000000000000000000000000040000000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAACCGAGTC.............................................................................................................................................27120.172000000000000000000000000000001000010000000000000000000000000000
................................................................................................................................................................................................................................................................ACCGAGTCGATCTAGCC------------------------ATGTCCGTCT..................................................................................................27200.153000000000000000000000000000010200000000000000000000000000000000
....................................................................................................................................................TTAAAAATGGGT-ATAAGGG.............................................................................................................................................................................................................................................19200.153000000003000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GAACCTATAAGAGCTAGAGACTT-G.................24200.153003000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TATGTATGAACGCAAGGATCTCAGAA.......................................26200.153000000000000000000000000000300000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGAACGCAAGGATCTCAGAACCT....................................23200.153300000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATCTCAGAACCTATAAGAGCTA..........................22200.153000000300000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATGTCCGT....................................................................................................27200.153000000000000000000001000000020000000000000000000000000000000000
....................................................................................................................................................TTAAAAATGGGT-ATAAGGGTAT..........................................................................................................................................................................................................................................22200.153000000100000000000000000000000020000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATGTCCGTC...................................................................................................28190.112000000000000000000000000000010100000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATG.........................................................................................................22200.102000000000000000000000000000020000000000000000000000000000000000
........................................................................................................................................................................................................................................ATGTATTCTTGATCAGCA...........................................................................................................................................................18200.102000000000000000000000000002000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CCGTCTGTCTGTCCGTCCGTC----CGTC...........................................................................25200.102000000000000000000000000000020000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TCTCAGAACCTATAAGAGCTA..........................21200.102000020000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAGAGACTT-GAAATTTTAGATGTAGAT27200.102000000000000000000000000000000020000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATAACCGAGTCGATCTAGCC------------------------ATGTCC......................................................................................................26200.102000000000000000000001000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GAGTCGATCTAGCC------------------------ATGTCCGTCTG.................................................................................................25200.102000000000000000000000000000000020000000000000000000000000000000
...............................................................................................................................................................................................................................................................AACCGAGTCGATCTAGCC------------------------ATGTCCG.....................................................................................................25200.102000000000000000000001000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ACGCAAGGATCTCAGAACCTA...................................21200.102000002000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TCAGAACCTATAAGAGCTAGAGACT....................25200.102000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAATAACCGAGTCGATCTAGCC------------------------ATG.........................................................................................................25200.102000002000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TCAGAACCTATAAGAGCT...........................18200.102000000000000000000000000000000000010000000000000000000000100000
.................................................................................................................................................CCATTAAAAATGGGT-ATAAGGGT............................................................................................................................................................................................................................................23200.102000000000000000000000000000002000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GAACCTATAAGAGCTAGAGACTT-..................23200.102000000000000000000000000000020000000000000000000000000000000000
...........................................................................................................................................................TGGGT-ATAAGGGTATATTGTATTTGT...............................................................................................................................................................................................................................26200.102000000000000000000000000020000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TCTTGATCAGCACCAATAACCGAGTCGA...........................................................................................................................................28120.081000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................ATTCTTGATCAGCACCAATAACCGAGT..............................................................................................................................................27120.081000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TCTTGATCAGCACCAATAACCGAG...............................................................................................................................................24120.081000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................TGATCAGCACCAATAACCGAGTCGAT..........................................................................................................................................26130.081000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTGATCAGCACCAATAACCGAGT..............................................................................................................................................23130.081000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................TTGATCAGCACCAATAACCGAG...............................................................................................................................................22130.081000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................TTGATCAGCACCAATAACCGAGTCGA...........................................................................................................................................26130.081000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TGATCAGCACCAATAACCGAGTCG............................................................................................................................................24130.081000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................TTGATCAGCACCAATAACCGAGTC.............................................................................................................................................24130.081000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CAGCACCAATAACCGAGTCGA...........................................................................................................................................21130.081000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................ATTCTTGATCAGCACCAATAACCGA................................................................................................................................................25140.071000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATAACCG.................................................................................................................................................25140.071000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................ATTCTTGATCAGCACCAATAACC..................................................................................................................................................23140.071000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TCTTGATCAGCACCAATAACCG.................................................................................................................................................22140.071000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATAACCGA................................................................................................................................................26140.071000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................GCAAAAT--------------------------C---------CAAATGTATGTAT.......................................................................................................................................................................21150.071000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GAGTCGATCTAGCC------------------------ATGTCC......................................................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATCTCAGAACCTATAAGAGCTAGAG.......................25200.051000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGGATCTCAGAACCTATAAGAG.............................22200.051000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATGT........................................................................................................23200.051000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AACCGAGTCGATCTAGCC------------------------ATGT........................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TATAAGAGCTAGAGACTT-GAAATTTT..........26200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GTATGAACGCAAGGATCTCA..........................................20200.051000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................TTGTGCAAAAT--------------------------C---------CAAATGTATG..........................................................................................................................................................................22200.051000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................TTAAAAATGGGT-ATAAGGGTATA.........................................................................................................................................................................................................................................23200.051100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CCATTAAAAATGGGT-ATAAGGG.............................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................TGGGT-ATAAGGGTATATTG......................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AACGCAAGGATCTCAGAACCTATAAGA..............................27200.051000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGAGACTT-GAAATTTTAGATGTAGAT26200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GTATGAACGCAAGGATCTCAG.........................................21200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATAACCGAGTCGATCTAGCC------------------------ATGTC.......................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GTC----CGTCCGTCCGTCCGTATGTATGAACGC....................................................30200.051000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATA.....................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATGTCCG.....................................................................................................26200.051000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCGTC----CGTCCGTCCGTCCG.................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCCGTC----CGT............................................................................19200.051000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................GT-ATAAGGGTATATTGTATTTGTGC.............................................................................................................................................................................................................................25200.051000000010000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................T-ATAAGGGTATATTGTATTTGTGC.............................................................................................................................................................................................................................24200.051000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GAGCTAGAGACTT-GAAATTTTAGAT......25200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGAACCTATAAGAGCTAGAGACTT-G.................25200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GTCGATCTAGCC------------------------ATGTCCGTCTGTCT..............................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CGTCTGTCTGTCCGTCCGTC----CGTC...........................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GTCTGTCTGTCCGTCCGTC----CG.............................................................................21200.051000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................................................................................................................................................................................................................................................................AAGGATCTCAGAACCTATAAGA..............................22200.051000001000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TATGAACGCAAGGATCTCAGAACCT....................................25200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GATCTAGCC------------------------ATGTCCGTCTGTCT..............................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CGTCCGTCCGTATGTATGAA.......................................................20200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................TGAACCCATTAAAAATGGGT-ATAAGGG.............................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TATGTATTCTTGATCAGCA...........................................................................................................................................................19200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGAACGCAAGGATCTCAGAACCTATA.................................26200.051100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................C------------------------ATGTCCGTCTGTCTGTCCG.........................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TATAAGAGCTAGAGACTT-GAAAT.............23200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------ATGTC.......................................................................................................24200.051000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGAGACTT-GAAATTTTAGATGTAGA.25200.051000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................................................TCCGTCCGTATGTATGAACGCAAGG................................................25200.051000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAGAGACTT-GAAATTTTA.........18200.051000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------AT..........................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTCCGTATGTATGAACGCAAGGATCTC...........................................27200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GATCTCAGAACCTATAAGAGCTAGAGAC.....................28200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTCCGTATGTATGAACGCAAGGATC.............................................25200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAACCGAGTCGATCTAGCC------------------------A...........................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAATAACCGAGTCGATCTAGCC------------------------A...........................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAAT...................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GCAAGGATCTCAGAACCTATAAGAG.............................25200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................TAAAAATGGGT-ATAAGGGTATATT.......................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CGTCCGTATGTATGAACGCAAGGATC.............................................26200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................AACCGAGTCGATCTAGCC------------------------ATGTCC......................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
AAT-TGTGTCAACGGT-----GAA----------T-----------CTTAAATGTAAA-------------------ATT----CA--------------------TCA-AGCAGTTGCAAGC-------AATCATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTGAAAAAGTATGTAACGGGCAGAAGGCGTCATCGCAGACCCCATAAAGTATATATATTCTTGATCTGGGCGACGAGCCGAGTCGATTTAGCT------------------------CTGTCCGTCTGTCCGTCCGTC--------CGTA------------TGTTTGAACGCGTCGATCTCAGAAGATATAAGAGCTAGAAACTT-GAC--T-AGAGACT--AGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................CATACCCTGAACCCATTGAAAA..........................................................................................................................................................................................................................................................22170.061100000
................................................................................................................................................................................................................GTCATCGCAGACCCCATAAAG................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................GTCATCGCAGACCCCATAAA.................................................................................................................................................................................20200.051100000
........................................................................................................................................................................................................................................................................................................................................TA------------TGTTTGAACGCGTCGATCTCAGAA.......................................26200.051000001
......................................................................................................................................................................................................................................................................................................................................CGTA------------TGTTTGAACGCGTCGAT..............................................21200.051100000
............................................................................................................................................................................................................................................................................................................................................................................AAGATATAAGAGCTAGAAACTT-G.................23200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................GAAGATATAAGAGCTAGAAACTT-G.................24200.051100000
................................................................................................................................................................................................................GTCATCGCAGACCCCATAAAGT...............................................................................................................................................................................22200.051100000
droGri2
GTG--GTGATAACAGG-----GGATTTTCAACCGCAAAACAAATATCACAAATTTATGATGTCCGAT------------G----AT--------------------TTAAT-------TAAACATTTAGTTATTATACTCTGAACCCATTAAAAATGGGTAAAAATGGTATAATGGTTTTGTGCAAATGTATATAACAGGCAGAAG-AAACATCTCCGACCCCATAAAGTATATATATTCCTGATCAGGGTCAACAGCCGAGTCGATAGAGCCA----------------------CATATCCGTCTGTCCGTCCGTA--------CGTC------------TGTATGGACACACAGATCTGAGAGAATATAAAAGCCAGAGACTT-CAAATTTGAAATAG--AGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TTG-TAAGATCACCGT---AAAAA--------------------------------------------------------------------CAAATACAT-TATT-ATAA---------TTT----AG-TAT-------------TATAA------TAT-A-TAAGGTATTATAATTTTGGT-AAAAGAGTGCAACGCAGAAAAAGAGACATATCCGACCTCATAAAGTATACATATTCCTGATCAGGATCACCTCCTGTGTCGATATAAGC------------------------ATGTCCGTCTGTCCGTCCGTCTGTC----CGTC------------CGTCTGTCTGCCTGTCTCTT-------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................ATTTTGGT-AAAAGAGTGCAACGCAGA...........................................................................................................................................................................................................2611.001000001
........................................................................................................................................................................................................................................................GATCACCTCCTGTGTCGATATAAGC------------------------............................................................................................................2530.331010000
..........................................................................................................................................................................................................................................................TCACCTCCTGTGTCGATATAAGC------------------------............................................................................................................2330.331100000
..........................................................................................................................................................................................................................................................................TATAAGC------------------------ATGTCCGTCTGTCCGTCC..........................................................................................25100.303030000
........................................................................................................................................................................................................................................................................GATATAAGC------------------------ATGTCCGTCTGTCCGTC...........................................................................................26200.204400000
.................................................................................................................................................................................................................................................................CTGTGTCGATATAAGC------------------------ATGTCCGTCT..................................................................................................2660.171010000
................................................................................................................................................................................................................................................................CCTGTGTCGATATAAGC------------------------ATGTCC......................................................................................................2370.141010000
...................................................................................................................................................................................................................................................................GTGTCGATATAAGC------------------------ATGTCC......................................................................................................2070.141010000
......................................................................................................................................................................................................................................................................TCGATATAAGC------------------------ATGTCCGTCTGTCCGTCC..........................................................................................29100.101010000
................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTC----CG.............................................................................20100.101100000
.........................................................................................................................................................................................................................................................................ATATAAGC------------------------ATGTCCGTCTGTCCGTCC..........................................................................................26100.101010000
......................................................................................................................................................................................................................................................AGGATCACCTCCTGTGTCGATAT........................................................................................................................................23130.081100000
...............................................................................................................................................................................................................................................................TCCTGTGTCGATATAAGC------------------------ATGTCCGC....................................................................................................26150.071010000
...................................................................................................................................................................................................................................................................................................................GTCCGTCCGTCTGTC----CGTC------------...............................................................19190.051010000
...........................................................................................................................................................................................................................................TATTCCTGATCAGGATCACCT.....................................................................................................................................................21200.051100000
..........................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTCCG.........................................................................................18200.051100000
.........................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTCCGT........................................................................................20200.051000001
.............................................................................................................................................................................................................................................TTCCTGATCAGGATCACCTCC...................................................................................................................................................21200.051000001
........................................................................................................................................................................................................................................................................................................................TCCGTCTGTC----CGTC------------CGTCTG.........................................................20200.051100000
...............................................................................................................................................................................................................................................................................GC------------------------ATGTCCGTCTGTCCGTCC..........................................................................................20200.051000001
............................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTCCGTCTG.....................................................................................20200.051100000
droBip1
TGG-TAAA--AATACC---A---A----------G-----------TTTAAAGTTTTT------GAA------------G----AC--------------------TCGTT------GGGACT-------CTTTATACCCGGTTCTCGTGG------AGT-ACAAGGGTACATTGAA--------------------------------TCATCTCGGACCCCA-AAAGTACATATATTCTTGATCAGCACCAACAGCCGAGTCGATATAGCT------------------------ATGTCCGTCTGTCCGTCCG------------TC------------CGTATGAACGCGTGGATCTCAGAGACTATAAGAGATGGAGCTT-------TTGAAATAG--AGSizeHit CountTotal NormTotal
No Reads
droKik1
TA----------------------------------------------------------------------------------------------------------------------TAT-------TTTTATACCC-----TTGC---------------AGGGTATTCAAATTTCAGT-----------------CA------GACCCTTTCGACTCTATAAAGTGTATTTATTCTTGATCAGCATCAACAGTCGAGTTGATCTAGCC------------------------ATGTCCGTCTGTCCGTTTCTACGCA----AACTAGTCCCTC----AGTT------------------------TTAAAGCTATCTGAAT-GAAACTTTGCATAT--AGSizeHit CountTotal NormTotal
No Reads
droFic1
CTG-AA---------------------------------------------AGTTTTG------AAA------------T----AA--------------------TTATTAA----AGTAGT-------TTTTATACCC-----TTGCAG------AGC-AAAAGGGTATTTTAA---------------------GGAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGAGCAGAATCGGAATCCGC------------------------CTGTACGTCTGTCCGTCTGTCCATC----TGTC------------CATCTGTCCGTC---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGC-------AATAGC---AAG------------C-----------CATAACTCTTAG------AGCTGTTTACAAAAT-GCTTAAG--TATTAAA-----GCTTT--------------CAT-------TATTATACCCGTTACTCGTAG------ATT-AAAGGGTTATATTATAATCATTGCATAATAAGTAACATGTAGAAGGA-ACGATTTCGACCCTTAAAAGAA--TATATTCTTGATCAGGATCAATACCCGACTGGATCTAGCC------------------------ATCCCTGTCTGTCTGTCC------------GTC------------TGTATGAGCGTCGAGGTCTCGGAAACTATAAAAGCTAGAGATTTCGGAATTTGACATGC--AGSizeHit CountTotal NormTotal
No Reads
droRho1
GGC-CAATATTGTGGC---TTGAA-------------------------AA--------------------------AT-TTTTAAT--CAAAAAG-----GCTAT--------------TAT-------TTTTATACCCGTTACTCGTAG------AGT-AAAAGGGTATATTGTATTCGTTGAAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATATAGCC------------------------ATGTCCGTCTGTCCGTCTGTC--------CGTC------------CGTATGAACGCTGAGATCTCGGAAACTATAAAAGCTAGAAGATT-GGCATTTTGCATGC--AGSizeHit CountTotal NormTotal
No Reads
droBia1
AGA-AA---------------AAA----------C-----------TGAAAAAAAATG------AAA------------A----CA--------------------TCATATTAAG-GTATAT-------ATTTATAACCGTTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGACA---------------------------GAGTACAATACAGTAAAGTA--TACAATCTTGTTCAGGATCAATAGCATAGTCGATCTATCC------------------------ATGTCCGTCTGTCCATTTGTCCGTC----CGTC------------CGTATGAACGCTGAGATCTTGGAAACTATAAAAGCTATAAGTTT-GACATTTGGTATGT--AGSizeHit CountTotal NormTotal
No Reads
droTak1
GAGAAATGGCAAAAGA---AAGAA----------T-----------TTAAATA------------------------AA-----------AACAAA----------TCCAATTTGG-GGTCGT-------TTTTATACCCGTTACTCGTAG------AGT-AAAAGGGTATATTAGATTCGTGCAAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAACTATATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCC------------------------ATGTCCGTCTGTCCGTCTGTC--------TGTC------------TGTATGAACGCTGAGATCTCGGAAACTATAAAAGCTAGAGGATT-GACATTTTGCATGC--AGSizeHit CountTotal NormTotal
No Reads
droEug1
TA---------AGAGC---ACGAATGTGTTT---C-----------CTTAGATATAAA------A------------CTATG--TATCGAAACAAA-----TCTAA--------------TAT-------ATTTATACCCGTTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGTTGAAAAGTATGTA-----------------------ACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCC------------------------ATGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTC------------CGTATGAACGCTGAGATCTCAGGAACTATAGCAGATAGAAAGTT-GAGATTAAGCATGA--AGSizeHit CountTotal NormTotal
No Reads
dm3
GCG-AAGGAAAGCAGTGAAGAGAA----------A-----------CTGAAAA------------------------TAATGTAATG--TAATGGA-----GGTGG--------------TAT-------TTTTATACCCGTTACTCGTAA------AGT-AAAAGGGTATACCAGATTCGTTGAAAAGCATGTAACAGACAGA----AGCGTTACCGACTATATAAATTATATATATTCTTGATCAAGATCAATAGCCGAGTCAAACTGACC------------------------ATGCCC------------------------GTT------------CGTATGAGCGCAGAGTTCTCAGAAACTATTGAAGCTAGAA------AGATTAAGCATAC--AGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................AAAGGGTATACCAGATTCGTT..............................................................................................................................................................................................................................2166.003600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000020000000000000000000001001000000000000000000000000300000000000000000000000000000
.................................................................................................................................................................AAAAGGGTATACCAGATTCGT...............................................................................................................................................................................................................................2164.002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000010000000000000000100010000000000000000000001000000000000000000000000000171000000000000000000000000000
...................................................................................................................................................................AAGGGTATACCAGATTCGTTG.............................................................................................................................................................................................................................2153.80190000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052000000020000000000000000000000000000000000000000000000000000000000000071000000000000000000100000000
...........................................................................................................................................................................ACCAGATTCGTTGAAAAGCAT.....................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................AGT-AAAAGGGTATACCAGATT..................................................................................................................................................................................................................................2141.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042000000000000000000000000000
...............................................................................................................................................................T-AAAAGGGTATACCAGATTCG................................................................................................................................................................................................................................2161.1770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000
.....................................................................................................................................................................................................................TACCGACTATATAAATTATATATAT.......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGGGTATACCAGATTCGTTGA............................................................................................................................................................................................................................2161.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000031000000000000000000000000000
......................................................................................................................................................................................................GACAGA----AGCGTTACCGACTAG......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................................................................................................................................................................TCTCAGAAACTATTGAAGCTAGAA------AGAT.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCGTTGAAAAGCATGTAACAGACAGA----A....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAATG--TAATGGA-----GGTGG--------------TAT-------T..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GACC------------------------ATGCCC------------------------GTT------------CGTATGAGCGCA...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CAGAAACTATTGAAGCTAGAA------AGAT.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTGAAAAGCATGTAACAGACAGA----AGCGT................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................GTATACCAGATTCGTTGAAAAGCATGT...................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................T-AAAAGGGTATACCAGATTCGT...............................................................................................................................................................................................................................2260.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
..............................................................................................................................................................GT-AAAAGGGTATACCAGATTC.................................................................................................................................................................................................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...............................................................................................................................................................T-AAAAGGGTATACCAGATTCGTTGAA...........................................................................................................................................................................................................................2650.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CCAGATTCGTTGAAAAGCAT.....................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TATACCAGATTCGTTGAAAAGCA......................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GGGTATACCAGATTCGTTGAAAAG........................................................................................................................................................................................................................2440.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGGGTATACCAGATTCGTTGAA...........................................................................................................................................................................................................................2260.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGAAAAGCATGTAACAGACAG..........................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................TATACCAGATTCGTTGAA...........................................................................................................................................................................................................................18160.5080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GGTATACCAGATTCGTTGAAA..........................................................................................................................................................................................................................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...................................................................................................................................................................AAGGGTATACCAGATTCGTTGA............................................................................................................................................................................................................................2250.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AAAAGGGTATACCAGATTCGTTGAA...........................................................................................................................................................................................................................2550.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................TTGATCAAGATCAATAGCCGAG...............................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................TTCGTTGAAAAGCATGTAA.................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GT-AAAAGGGTATACCAGATTCGTTG.............................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTCTTGATCAAGATCAATAGCCGAG...............................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................TTGATCAAGATCAATAGCCGAGTC.............................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CTTGATCAAGATCAATAGCCG.................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ATCAAGATCAATAGCCGAGTC.............................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TACTCGTAA------AGT-AAAAGGGTA...........................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GGGTATACCAGATTCGTTGAA...........................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................AT-------TTTTATACCCGTTACTCGT................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................AGATTCGTTGAAAAGCATGT...................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................ATTCGTTGAAAAGCATGTA..................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................TATATTCTTGATCAAGATCAATAGCC..................................................................................................................................................2650.2010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAAGGGTATACCAGATTCGTTG.............................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................TATACCAGATTCGTTGAAAAG........................................................................................................................................................................................................................21110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000
....................................................................................................................................................................AGGGTATACCAGATTCGTTGAAA..........................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GTATACCAGATTCGTTGAAA..........................................................................................................................................................................................................................20120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................TTCGTTGAAAAGCATGTAACAGC.............................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TATATATTCTTGATCAAGATCAATAGC...................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAAGGGTATACCAGATTCGT...............................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................AAAAGGGTATACCAGATTCGTT..............................................................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................TATTCTTGATCAAGATCAATA.....................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GGGTATACCAGATTCGTTGAAA..........................................................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TAT-------TTTTATACCCGTTACTCG.................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TATATATATTCTTGATCAAGA...........................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TATACCAGATTCGTTGAAA..........................................................................................................................................................................................................................19140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TACCCGTTACTCGTAA------AGT-....................................................................................................................................................................................................................................................19140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AAGATCAATAGCCGAGTC.............................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAAGGGTATACCAGATTCG................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GGTATACCAGATTCGTTGAA...........................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................ACTCGTAA------AGT-AAAAGGG.............................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTT-AATT--AATATC---AAAAA----------T-----------TTTTTTATAATA------CAT------------T----AT--------------------TTAGAGCAATTGAAAAT-------ATTTATGACCGTTACTCGTAG------AGT-AAAAGGCTATACAAAATTCGTTGAA---------TCAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTACATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGATCAAAGACACTAGAATATTATTGACCCTGTCCGCCCGTCTGCCTTTC--------CGTC------------CGTATAAACGTCGAGATCTCAAGAACTATAAAAGCTATAAGGTC-GGGAATAAGCATAC--AGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAAGAACTATAAAAGCT...........................2527.501500000086010000000
.........................................................................................................................................................................................................................................................................................................................................................................CAAGAACTATAAAAGCTATAAGGT....................2413.00300000000030000000
....................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATC.........................................................................................................................................24202.2044000000000044000000
.........................................................................................................................................................................................................................................................................................................................................................................CAAGAACTATAAAAGCTATAAGGTC-..................2512.00200000002000000000
..................................................................................................................................................................................................................................................................CGAGTCGATCTGATCAAAGACACT...........................................................................................................................2412.00200000000000020000
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAAGAACTATAAAAGC............................2422.00400000013000000000
...........................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTGATCAA..................................................................................................................................2411.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................ACGTCGAGATCTCAAGAACTAT..................................2231.00300003000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAAGGTC-GGGAATAAGCATA.....2111.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................CTATAAAAGCTATAAGGTC-GGGAA.............2411.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AAGAACTATAAAAGCTATAAGG.....................2211.00100000000100000000
.....................................................................................................................................................................................................................................................................................ACACTAGAATATTATTGACCCT..........................................................................................................2211.00110000000000000000
...........................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTGATCAAAGA...............................................................................................................................2711.00100000001000000000
..................................................................................................................................ATTTATGACCGTTACTCGTAG------AGT-....................................................................................................................................................................................................................................................2411.00100010000000000000
..................................................................................................................................................................................................................................................................CGAGTCGATCTGATCAAAGACACTA..........................................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................AAGCTATAAGGTC-GGGAATAAG.........2211.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................TATAAACGTCGAGATCTCAAG........................................2111.00110000000000000000
............................................................................................................................................................................................................................................................AATAGCCGAGTCGATCTGAT.....................................................................................................................................2021.00200000200000000000
..............................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTC.............................................................................................................................................26200.501001000000009000000
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAAGAACTATAAAAG.............................2320.50100000010000000000
................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGATC.........................................................................................................................................28200.35700000000007000000
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAAGAACTATAAAA..............................2230.33100000001000000000
................................................................................................................................................................................................................AGCGTTTCCGACCATATAAAGTACA............................................................................................................................................................................2530.33100000000000001000
..........................................................................................................................................................................................................................................ATATTCTTGATCAGGATCAATAGCC..................................................................................................................................................25200.30600010000104000000
..................................................................................................................................................................................................................................AAGTACATATATTCTTGATCAGGA...........................................................................................................................................................2450.20100000010000000000
.....................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATCTGA......................................................................................................................................2650.20100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAAGAACT....................................1670.14100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAAGAACTATAAAAGA............................2470.14100000010000000000
................................................................................................................................................................................................................................................................................................................................................................TCGAGATCTCAAGAACT....................................1770.14100000000001000000
.....................................................................................................................................................AG------AGT-AAAAGGCTAT..........................................................................................................................................................................................................................................1580.13100000000001000000
...........................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGA................................................................................................................................................26200.10200000020000000000
.............................................................................................................................................................................................................................................TTCTTGATCAGGATCAA.......................................................................................................................................................17200.10200000000002000000
....................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGAT..........................................................................................................................................23200.10200000020000000000
................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGAT..........................................................................................................................................27200.10200000000002000000
.....................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATC.........................................................................................................................................23200.10200000002000000000
..........................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTGA......................................................................................................................................21130.08100000010000000000
.....................................................................................................................................................................................................................................TACATATATTCTTGATCAGGATCAAT......................................................................................................................................................26140.07100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................CAAGAACTATAAAAGCT...........................17150.07100000000001000000
............................................................................................................................................................................................................................................................AATAGCCGAGTCGATCTGA......................................................................................................................................19170.06100000010000000000
.....................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATCTG.......................................................................................................................................25200.05100000001000000000
..............................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTCGAT..........................................................................................................................................29200.05100000010000000000
......................................................................................................................................................................................................................................................................................................................................................CGTATAAACGTCGAGATCTT...........................................20200.05100000000000001000
.........................................................................................................................................................................................................................................................................................................................................C------------CGTATAAACGTCGA.................................................15200.05100000000001000000
...............................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCCGAGTCGA...........................................................................................................................................27200.05100000010000000000
.....................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGATCTC.......................................................................................................................................25200.05100000010000000000
..........................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTG.......................................................................................................................................20200.05100000000001000000
.............................................................................................................................................................................................................................................TTCTTGATCAGGATC.........................................................................................................................................................15200.05100000000010000000
..................................................................................................................................................................................................................................................GATCAGGATCAATAGCCGAGTCGAT..........................................................................................................................................25200.05100000000001000000
.....................................................................................................................................................................................................AGGCAGAAGGAAGCGTTTCCGACC........................................................................................................................................................................................24200.05100000000001000000
droSec2
CTT-AA---------------------------------------------CTATTTA------AAT------------A----AA----ACACAACACAT-ATTT--------------TTT-------AATTATACCCGTTACTTGTAG------AGT-AAACGGCTATACTAGATCC-------------------------------GTTTTCGACTATATAAAGTATATATATTCTAGATCAGGATTAATAGCCGAGTCGGTCTGTCC------------------------ATGGCCATCTGTTCGTC-------------GTC------------GGTATGAATGTCGAGATCTCAGGAATTATAAAAGCTATAAGGTT-GAGATTCGGCATAC--AGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................TAATAGCCGAGTCGGTCTGTCC------------------------ATGGC.......................................................................................................2711.0011000
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAGGAATTATAAAAGCT...........................2540.2510100
.................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAGGAATTATAAAAGC............................2440.2510001
droYak3
GGT-------AACAGA---ATGAA----------T-----------CTTTATTTACAG------AA------------------------------------------------------------------------TAATTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGTTGAAAAGTATGTAACAGGCAGAAAAAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCC------------------------ATGTGCGTCTGTCCGTCCGTCTGTCTGTCCGTC------------CGTATGAACGCTGAGATCTCAGGAACTACAATAGCTAGATAGTT-GAGATTCGGCATAC--AGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................TACAATAGCTAGATAGTT-GAGATTCGGC........2813.00300300000000
............................................................................................................................................................................................................................................................................TGGCC------------------------ATGTGCGTCTGTCCGTCCGT........................................................................................2541.50603100000002
............................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTC------------CGTATGAACGCT...................................................26201.1523000000000023
..............................................................................................................................................................................................ATGTAACAGGCAGAAAAAAGCGTTTCC............................................................................................................................................................................................27101.1011000000000011
..............................................................................................................................................................................................ATGTAACAGGCAGAAAAAAGCGTT...............................................................................................................................................................................................24111.0912000000000012
.........................................................................................................................................................................................................................................................................................................................................................................CAGGAACTACAATAGCTAGATAGTT-G.................2611.00101000000000
.....................................................TACAG------AA------------------------------------------------------------------------TAATTACTCGTAG------AGT-AAA.................................................................................................................................................................................................................................................2611.00101000000000
........................................................................................................................................................................................................................................................................GATCTGGCC------------------------ATGTGCGTCTGTCCGTC...........................................................................................2621.00200000000002
.....................................................TACAG------AA------------------------------------------------------------------------TAATTACTCGTAG------AGT-....................................................................................................................................................................................................................................................2311.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................TCAGGAACTACAATAGCTAGATAGTT-..................2611.00101000000000
............................................................................................................................................................................................................................................................................TGGCC------------------------ATGTGCGTCTGTCCGTCCGTC.......................................................................................2641.00403100000000
...................................................................................................................................................................................................................................................................................................................................................................................AATAGCTAGATAGTT-GAGATTCGGCA.......2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGATAGTT-GAGATTCGGCATA.....2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAATAGCTAGATAGTT-GAGATTCGGC........2611.00110000000000
...................................................................................................................................................................................................................................................................GAGTCGATCTGGCC------------------------ATGTGCGTCTGT................................................................................................2611.00100100000000
..........................................................................................................................................TAATTACTCGTAG------AGT-AAAAGGGTA...........................................................................................................................................................................................................................................2521.00201100000000
.....................................................TACAG------AA------------------------------------------------------------------------TAATTACTCGTAG------AGT-ATT.................................................................................................................................................................................................................................................2611.00100100000000
..................................T-----------CTTTATTTACAG------AA------------------------------------------------------------------------TAATTACTCGTA...............................................................................................................................................................................................................................................................2711.00101000000000
..........................................................................................................................................................................................................................................................................TCTGGCC------------------------ATGTGCGTCTGTCCGTC...........................................................................................2440.75301200000000
..........................................................................................................................................................................................................................................................................TCTGGCC------------------------ATGTGCGTCTGTCCGTCC..........................................................................................2540.75300300000000
............................................................................................................................................................................................................................................................................TGGCC------------------------ATGTGCGTCTGTCCGTCC..........................................................................................2340.75300300000000
............................................................................................................................................................................................................................................................................................................TGCGTCTGTCCGTCCGTCTGTCTGTC...............................................................................2630.67200200000000
..............................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCC------------------------ATGTGCGT....................................................................................................2720.50100010000000
......................................................................................................................................................................................................................................................................TCGATCTGGCC------------------------ATGTGCGTCTGTCCG.............................................................................................2620.50101000000000
.................................................................................................................................................................................................................................................................................................................................................................TGAGATCTCAGGAACTACAATAGCTAGA........................2840.50201000010000
.................................................................................................................................................TCGTAG------AGT-AAAAGGGTATAC........................................................................................................................................................................................................................................21200.45900900000000
............................................................................................................................................................................................................................................................................................................TGCGTCTGTCCGTCCGTCTGTC...................................................................................2250.40200200000000
....................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATC.........................................................................................................................................24200.40806020000000
.................................................................................................................................................................................TTCGTTGAAAAGTATGTAACAGGCAGAAA.......................................................................................................................................................................................................29200.35700000000007
..............................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCC------------------------ATGTGC......................................................................................................2530.33100100000000
..............................................................................................................................................................................................................................................................TAGCCGAGTCGATCTGGCC------------------------ATGTG.......................................................................................................2460.33202000000000
..............................................................................................................................................................................................................................................................................................................................................................CGCTGAGATCTCAGGAACTACAATAGC............................2740.25101000000000
..........................................................................................................................................................................................................................................................................................................TGTGCGTCTGTCCGTCCGTCTGTCTG.................................................................................2640.25101000000000
...............................................................................................................................................................................................................................................................................................................................................................GCTGAGATCTCAGGAACTACAATAGCTA..........................2840.25101000000000
..........................................................................................................................................................................................................................................................................TCTGGCC------------------------ATGTGCGTCTGTCCGTCCGTC.......................................................................................2840.25101000000000
.............................................................................................................................................................................................................................................................................................................................................................ACGCTGAGATCTCAGGAACTACAATAGC............................2840.25100100000000
..........................................................................................................................................................................................................................................................................TCTGGCC------------------------ATGTGCGTCTGTCCGTCCGT........................................................................................2740.25101000000000
............................................................................................................................................................................................................................................................................TGGCC------------------------ATGTGCGTCTGTCCGTCCG.........................................................................................2440.25101000000000
.............................................................................................................................................................................................................................................................................GGCC------------------------ATGTGCGTCTGTCCGTCCGTC.......................................................................................2540.25101000000000
.........................................................................................................................................................................................................................................................................ATCTGGCC------------------------ATGTGCGTCTGTCCGTCCG.........................................................................................2740.25101000000000
............................................................................................................................................................................................................................................................................................................TGCGTCTGTCCGTCCGTCTGTCTGT................................................................................2540.25101000000000
............................................................................................................................................................................................................................................................................................................TGCGTCTGTCCGTCCGTCTGTCTG.................................................................................2440.25101000000000
............................................................................................................................................................................................................................................................................TGGCC------------------------ATGTGCGTCTGTCCGTCCGTCT......................................................................................2740.25100100000000
....................................................................................................................................................................................................CAGGCAGAAAAAAGCGTTTCCGACCA.......................................................................................................................................................................................26100.20202000000000
.........................................................................................................................................................................................................................................................................ATCTGGCC------------------------ATGTGCGTCTGTC...............................................................................................2150.20101000000000
.......................................................................................................................................................................................................GCAGAAAAAAGCGTTTCCGACCATA.....................................................................................................................................................................................25110.18200200000000
................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCC..................................................................................................................................................19200.15300300000000
.............................................................................................................................................................................TAGATTCGTTGAAAAGTATGTAACAGG.............................................................................................................................................................................................................27200.15300300000000
................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTCTG.................................................................................20200.15303000000000
.......................................................................................................................................................................GTATACTAGATTCGTTGAAAAGTAT.....................................................................................................................................................................................................................25200.15303000000000
....................................................................................................................................................................................................CAGGCAGAAAAAAGCGTTTCCGACCATAT....................................................................................................................................................................................2980.13100100000000
...............................................................................................................................................................................................TGTAACAGGCAGAAAAAAGCGTTTC.............................................................................................................................................................................................25100.10100010000000
....................................................................................................................................................................................................CAGGCAGAAAAAAGCGTTTCCGACCATA.....................................................................................................................................................................................28100.10101000000000
....................................................................................................................................................................................................CAGGCAGAAAAAAGCGTTTCCGACCAT......................................................................................................................................................................................27100.10101000000000
.........................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATCTGGCC------------------------ATG.........................................................................................................27200.10202000000000
...............................................................................................................................................................................................TGTAACAGGCAGAAAAAAGCGTTTCC............................................................................................................................................................................................26100.10100100000000
....................................................................................................................................................................................................................................................................................................................TCCGTCCGTCTGTCTGTCCGTC------------CGTA...........................................................26200.10202000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTT-GAGATTCGGCATAC--A.19180.06100000010000
......................................................................................................................................................................................................................................................................................................................................................................TCTCAGGAACTACAATAGCTT..........................21200.05101000000000
................................................................................................................................................CTCGTAG------AGT-AAAAGGGT............................................................................................................................................................................................................................................18200.05100000010000
.....................................................................................................................................................................................................................................................................................................................CCGTCCGTCTGTCTGTCCGTC------------CGTA...........................................................25200.05101000000000
....................................................................................................................................................................................................................................................................................................................TCCGTCCGTCTGTCTGTCCGTC------------CGT............................................................25200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................C------------CGTATGAACGCTGAGATCTC...........................................21200.05101000000000
.....................................................................................................................................................................................................................................................................................................................CCGTCCGTCTGTCTGTCCGTC------------CGTAT..........................................................26200.05100010000000
................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTCTGTCCGTC------------C..............................................................27200.05100100000000
.....................................................................................................................................................................................................................................................................................................................................CCGTC------------CGTATGAACGCTGAGATCTCA..........................................26200.05101000000000
..................................................................................................................................................................................................................................................................................................................................TGTCCGTC------------CGTATGAACGCTGAGA...............................................24200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................TATGAACGCTGAGATCTCAGGAACT....................................25200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAACGCTGAGATCTCAGG........................................20200.05110000000000
droEre2
ACA-TTAAAGAGCAGA---TAAAA----------C---------TTTAAAAGTTCCTGAGAGACTAT---------------------------------------TCTCAAA----TTGAAT-------AATTATACCCGTTACTCGTAG------AGT-AAAAGGGTATACTAGATTCGTTGAAAAGTATGTAATAGGCAGAAGAAAACGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGGCGAGTCGATCTGGCC------------------------AAGTCCGTTTGTCCGTCCGTC--------TGTT------------CGTATGAAAGCCTCGATCTCAGGAACTACAAAAGCTAGAATGTT-GAGATTAAGCATGC--AGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................AAAAGGGTATACTAGATTCGT...............................................................................................................................................................................................................................21200.1020000200
....................................................................................................................................................TAG------AGT-AAAAGGGTATACTAGATTC.................................................................................................................................................................................................................................25200.0510000100
.....................................................................................................................................TATACCCGTTACTCGTAG------AGT-....................................................................................................................................................................................................................................................21200.0510001000
................................................................................................................................................................................................................AACGTTTCCGACCATATAAAGT...............................................................................................................................................................................22200.0510000010

Generated: 05/18/2015 at 01:27 AM