ID:

dps_1677

 Coordinate:

4_group4:4029785-4029935 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.7 -15.2 -15.2

Flybase annnotation

CDS [Dpse\GA29022-cds]; exon [dpse_GLEANR_9433:1]; intron [Dpse\GA29022-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
Hopers2DNAhAT-hobo-
(TCCG)nSimple_repeatSimple_repeat+
DNAREP1_DMRCHelitron+
mature
  1. 3:8177118-8177140 -
  2. 4_group1:3063661-3063683 +
  3. Unknown_group_648:4912-4934 +
  4. dps_1677  4_group4:4029865-4029887 +
  5. XL_group1a:5381284-5381306 -
  6. XL_group1a:5487234-5487256 -
  7. Unknown_singleton_2163:1303-1325 -
star
  1. Unknown_group_355:1481-1500 +
  2. Unknown_singleton_1638:2523-2542 +
  3. Unknown_group_17:15759-15778 +
  4. Unknown_group_17:20452-20471 +
  5. Unknown_group_128:5432-5451 +
  6. Unknown_group_704:5854-5873 +
  7. 3:1696234-1696253 +
  8. 2:17368819-17368838 +
  9. 2:23965524-23965543 +
  10. 2:27049149-27049168 +
  11. Unknown_group_45:9850-9869 +
  12. XL_group3a:1768857-1768876 +
  13. 4_group2:1058940-1058959 +
  14. 4_group4:3499831-3499850 +
  15. dps_1677  4_group4:4029795-4029814 +
  16. XL_group1a:616566-616585 +
  17. XL_group1a:703706-703725 +
  18. XL_group1a:7119081-7119100 +
  19. Unknown_singleton_3171:341-360 +
  20. Unknown_singleton_489:3913-3932 +
  21. 2:15816171-15816190 +
  22. Unknown_group_170:18508-18527 +
  23. Unknown_group_14:62955-62974 +
  24. Unknown_group_1:55844-55863 +
  25. XL_group1e:3401257-3401276 +
  26. XL_group1e:5704982-5705001 +
  27. XL_group1e:5948782-5948801 +
  28. Unknown_group_37:8642-8661 +
  29. Unknown_singleton_959:5948-5967 +
  30. 3:14324556-14324575 +
  31. 2:3358645-3358664 +
  32. 2:5523307-5523326 +
  33. 2:17068843-17068862 +
  34. 2:18351943-18351962 +
  35. 2:18411804-18411823 +
  36. XR_group6:4938660-4938679 +
  37. XL_group1a:2114475-2114494 +
  38. Unknown_group_427:10823-10842 +
  39. Unknown_singleton_1095:247-266 +
  40. Unknown_group_418:4445-4464 +
  41. Unknown_group_24:85085-85104 -
  42. XL_group1e:9720009-9720028 -
  43. 4_group5:1640048-1640067 -
  44. XL_group3b:24571-24590 -
  45. XR_group5:210636-210655 -
  46. Unknown_group_267:4466-4485 -
  47. Unknown_group_137:12370-12389 -
  48. Unknown_group_232:24546-24565 -
  49. 3:683157-683176 -
  50. 2:17274883-17274902 -
  51. 2:18022692-18022711 -
  52. 4_group3:42865-42884 -
  53. 4_group3:11169949-11169968 -
  54. XR_group6:308337-308356 -
  55. XR_group6:3107710-3107729 -
  56. XL_group1a:44303-44322 -
  57. XL_group1a:466868-466887 -
  58. XL_group1a:709796-709815 -
  59. Unknown_group_307:345-364 -
  60. Unknown_singleton_3505:93-112 -
  61. Unknown_group_539:609-628 -
  62. Unknown_group_1:55409-55428 -
  63. Unknown_group_1:95451-95470 -
  64. Unknown_group_485:900-919 -
  65. Unknown_group_99:23590-23609 -
  66. Unknown_group_805:1587-1606 -
  67. Unknown_group_214:28551-28570 -
  68. 2:5288183-5288202 -
  69. Unknown_group_66:27521-27540 -
  70. 4_group1:2848594-2848613 -
  71. Unknown_group_9:7300-7319 -
  72. Unknown_group_323:16095-16114 -
  73. XR_group6:9328245-9328264 -
  74. XL_group1a:4354027-4354046 -
  75. XL_group1a:4410891-4410910 -
  76. Unknown_singleton_2441:1745-1764 -
  77. Unknown_singleton_3545:829-848 -
  78. Unknown_singleton_2150:500-519 -
  79. Unknown_singleton_119:1574-1593 -
  80. Unknown_singleton_1699:755-774 -
  81. Unknown_group_230:40200-40219 +
  82. Unknown_group_155:1752-1771 +
  83. Unknown_group_132:12062-12081 +
  84. XL_group1e:143262-143281 +
  85. XL_group1e:3560561-3560580 +
  86. XL_group3b:211361-211380 +
  87. XR_group5:129033-129052 +
  88. 3:19585830-19585849 +
  89. 2:7487230-7487249 +
  90. 2:12391056-12391075 +
  91. Unknown_group_179:494-513 +
  92. Unknown_group_221:14825-14844 +
  93. Unknown_group_270:970-989 +
  94. Unknown_group_189:10703-10722 +
  95. XL_group1a:1305242-1305261 +
  96. XL_group1a:1655213-1655232 +
  97. Unknown_group_336:9216-9235 +
  98. Unknown_group_710:2538-2557 +
  99. Unknown_singleton_2426:912-931 +
  100. Unknown_singleton_1909:1256-1275 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAAGATTTCAAGCAGCCCTTTTTATACCCGGTGCTCGAAGAGTATAAGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGAAAGAGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGACGATTGAGCCATTTCTGTCTGTCCGTCCGTCCGTCTGTCCGTCCCCATTAGCGCCTAGTGCTCAAAGACTATAAGAGCTAGAGCAACGAAATTTTGTA
************************************************************...(((.(((....(((((((((((..(((..((((......)))).))).........)))))))))))....))).)))............************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 M059
embryo
 GSM343916
embryo
 V112
male body		 GSM444067
head
 SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAA........ 26 0 8 34.00 272 109 137 17 8 1 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAA............ 22 0 20 29.10 582 0 582 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAA....... 27 0 8 23.75 190 46 101 35 6 0 1 0 1
.......................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGC.............. 22 0 20 12.95 259 0 0 259 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGA.................................................................................................. 23 0 7 8.86 62 52 0 0 10 0 0 0 0
............................................................TTTGTGGTGAAAATGGATGT........................................................................................................................................................................... 20 0 20 4.35 87 85 0 0 0 2 0 0 0
.............................................................TTGTGGTGAAAATGGATGTGTG........................................................................................................................................................................ 22 0 20 4.00 80 80 0 0 0 0 0 0 0
............................................................TTTGTGGTGAAAATGGATGTG.......................................................................................................................................................................... 21 0 20 3.70 74 0 0 70 4 0 0 0 0
...................................TCGTAGAGTAAAAGGGTATACTAGATT............................................................................................................................................................................................. 27 3 2 3.50 7 7 0 0 0 0 0 0 0
...............................................................................................................................................ATAGCCGAGACGATTGAGCC........................................................................................ 20 0 3 3.33 10 8 0 0 2 0 0 0 0
................................................................................................................................................TAGCCGAGACGATTGAGCCAT...................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................TCGTAGAGTAAAAGGGTATACTAGA............................................................................................................................................................................................... 25 3 2 3.00 6 6 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGACGATT............................................................................................. 28 0 3 2.33 7 1 0 6 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAAT...... 28 0 7 2.29 16 5 2 8 1 0 0 0 0
.............................................................TTGTGGTGAAAATGGATGTGTGT....................................................................................................................................................................... 23 0 20 2.05 41 39 2 0 0 0 0 0 0
................................................................................................................................................TAGCCGAGACGATTGAGCCA....................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAACGA......... 27 0 20 1.95 39 0 0 0 39 0 0 0 0
........................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAACGAA........ 27 0 8 1.75 14 6 8 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAAA...... 28 1 11 1.09 12 5 4 3 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGAC................................................................................................. 24 0 6 1.00 6 2 0 0 4 0 0 0 0
...................................TCGTAGAGTAGAAGGGTATACTAGAT.............................................................................................................................................................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAACGAA........ 28 0 8 1.00 8 3 3 0 2 0 0 0 0
................................................................................................................................................TAGCCGAGACGATTGAGCC........................................................................................ 19 0 3 1.00 3 2 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACG.......... 24 0 20 0.80 16 0 0 0 0 16 0 0 0
........................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAACGAAA....... 28 0 8 0.75 6 2 2 2 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCCAGAGCAACGAA........ 26 1 20 0.75 15 9 5 0 1 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGACGA............................................................................................... 26 0 6 0.67 4 1 0 3 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGACG................................................................................................ 25 0 6 0.67 4 4 0 0 0 0 0 0 0
..............................................................TGTGGTGAAAATGGATGTGTGTAA..................................................................................................................................................................... 24 0 20 0.65 13 12 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGGGCAACG.......... 24 1 20 0.60 12 12 0 0 0 0 0 0 0
............................................................TTTGTGGTGAAAATGGATGTGT......................................................................................................................................................................... 22 0 20 0.60 12 0 0 0 12 0 0 0 0
..............................................................TGTGGTGAAAATGGATGTGTG........................................................................................................................................................................ 21 0 20 0.50 10 0 9 0 0 1 0 0 0
..........................................................................................................................................................................................................................AGACTATAAGAGCTAGAGCAACGAAA....... 26 0 14 0.50 7 4 3 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGACTATAAGAGCTAGAGCAACGAA........ 25 0 15 0.47 7 7 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAT....... 27 1 18 0.44 8 1 3 4 0 0 0 0 0
......................................................................................................................................TCAGCATGAATAGCCGAGACGATT............................................................................................. 24 1 7 0.43 3 3 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCCAGAGCAACGAAA....... 27 1 10 0.40 4 4 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGACGAT.............................................................................................. 27 0 5 0.40 2 1 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAG....... 27 1 20 0.40 8 0 0 8 0 0 0 0 0
...........................................................................................................................................ATGAATAGCCGAGACGATTGA........................................................................................... 21 1 8 0.38 3 2 0 0 0 1 0 0 0
..................................................................................................................................................................................TCCGTCCGTCTGTCCGTCCCC.................................................... 21 0 20 0.35 7 7 0 0 0 0 0 0 0
....................................CGTAGAGTAAAAGGGTATACTAGATT............................................................................................................................................................................................. 26 3 3 0.33 1 1 0 0 0 0 0 0 0
....................................CGTAGAGTAAAAGGGTATACTAGA............................................................................................................................................................................................... 24 3 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................AATAGCCGAGACGATTGAGCC........................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................TCAGCATGAATAGCCGAGACG................................................................................................ 21 1 12 0.33 4 4 0 0 0 0 0 0 0
...............................................................................................................................TTCTTGATCAGCATCAATAGCCGAGA.................................................................................................. 26 0 6 0.33 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAGGAA........ 26 1 13 0.31 4 0 0 4 0 0 0 0 0
......................................................................................................................................................................................................................TCAAAGACTATAAGAGCTAGAG............... 22 0 20 0.30 6 0 0 6 0 0 0 0 0
...................................................................................................................................TGATCAGCATCAATAGCCGAGA.................................................................................................. 22 0 8 0.25 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................TGAGCCATTTCTGTCTGTCCG......................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................................................................AATAGCCGAGACGATTGAG.......................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTCTGTCCGTCCGTCCGTC............................................................... 19 0 20 0.25 5 5 0 0 0 0 0 0 0
.....................................................................................................................................ATCAGCATGAATAGCCGAGAC................................................................................................. 21 1 13 0.23 3 2 0 0 1 0 0 0 0
..................................................................................................................................................................................................................GTGCTCAAAGACTATAAGAGC.................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
...................................................................................................................................TGATCAGCATCAATAGCCGAG................................................................................................... 21 0 20 0.20 4 0 0 0 0 0 0 4 0
.................................................................................................................................................................................................................AGTGCTCAAAGACTATAAGAG..................... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
.....................................................................................................................................................................TTCTGTCTGTCCGTCCGTCC.................................................................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAATGAA........ 26 1 17 0.18 3 2 1 0 0 0 0 0 0
...................................................................................................................................TGATCAGCATCAATAGCCGAGACGA............................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0
...................................................................................................................................TGATCAGCATCAATAGCCGAGACG................................................................................................ 24 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTGTAAGAGCTAGAGCAACGAA........ 26 1 18 0.17 3 0 3 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAATTTC... 31 1 12 0.17 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCCAGAGCAACGAAAA...... 28 2 13 0.15 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACAAAA....... 27 1 20 0.15 3 1 2 0 0 0 0 0 0
................................................................TGGTGAAAATGGATGTGTGTA...................................................................................................................................................................... 21 0 20 0.15 3 0 3 0 0 0 0 0 0
........................................................................................................................................................................TGTCTGTCCGTCCGTCCGTCTGT............................................................ 23 0 20 0.15 3 3 0 0 0 0 0 0 0
................................................................................................................................TCTTGATCAGCATCAATAGCCGAGA.................................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAATTT.... 30 0 7 0.14 1 0 0 1 0 0 0 0 0
......................................................................................................................................TCAGCATGAATAGCCGAGACGATTGAGC......................................................................................... 28 1 7 0.14 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATAAATAGCCGAGA.................................................................................................. 23 1 15 0.13 2 2 0 0 0 0 0 0 0
..........................................................................................................................................CATGAATAGCCGAGACGATT............................................................................................. 20 1 8 0.13 1 1 0 0 0 0 0 0 0
..............................GGTGCTCGGGGACTATAAGGG........................................................................................................................................................................................................ 21 3 8 0.13 1 0 0 1 0 0 0 0 0
..........................................................................................................................................CATGAATAGCCGAGACGATTG............................................................................................ 21 1 8 0.13 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGATG................................................................................................ 25 1 16 0.13 2 2 0 0 0 0 0 0 0
.......................................................................................................................................CAGCATGAATAGCCGAGACGATT............................................................................................. 23 1 8 0.13 1 1 0 0 0 0 0 0 0
...........................................................................................................................................ATGAATAGCCGAGACGATTG............................................................................................ 20 1 8 0.13 1 1 0 0 0 0 0 0 0
............................................................................................................................................TGAATAGCCGAGACGATTGA........................................................................................... 20 1 8 0.13 1 1 0 0 0 0 0 0 0
..................................................................................................................................TGGATCAGCATCAATAGCCGAGA.................................................................................................. 23 1 17 0.12 2 0 0 0 2 0 0 0 0
.........................................................................................................................................................................................................................AAGACAATAAGAGCTAGAGCAACGAA........ 26 1 9 0.11 1 0 1 0 0 0 0 0 0
...............................................................................................................................TTCTTGATCAGCATCAATAG........................................................................................................ 20 0 20 0.10 2 0 0 2 0 0 0 0 0
..................................................................................................................................TTGATGAGCATCAATAGCCGAGA.................................................................................................. 23 1 10 0.10 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAAGTG.... 30 2 10 0.10 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACAAA........ 26 1 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCAAGA.................................................................................................. 23 1 20 0.10 2 2 0 0 0 0 0 0 0
............................................................TTTGTGGTGAAAATGGATGTGTG........................................................................................................................................................................ 23 0 20 0.10 2 0 0 0 0 0 0 2 0
......................TTATTGCCGGTGCTCGAGGAG................................................................................................................................................................................................................ 21 3 10 0.10 1 0 0 0 0 0 0 1 0
....................................................................GAAAATGGATGTGTGTAACG................................................................................................................................................................... 20 0 20 0.10 2 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAAC....... 27 1 10 0.10 1 0 1 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGAAA................................................................................................ 25 2 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCGAGATGAT.............................................................................................. 27 1 10 0.10 1 1 0 0 0 0 0 0 0
..................................................GTATATTAGATTTGTGGTGA..................................................................................................................................................................................... 20 0 20 0.10 2 0 0 2 0 0 0 0 0
...................................TCGTAGAGTAAAAGGGTATACTA................................................................................................................................................................................................. 23 3 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGTCTATAAGAGCTAGAGCAACGAA........ 26 1 11 0.09 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................AATACTATAAGAGCTAGAGCAACGAA........ 26 1 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCAAGAGCAACGAA........ 26 1 11 0.09 1 1 0 0 0 0 0 0 0
................................................................................GTGTAACGTCCAGAAGAAAG....................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................ATCAGCATGAATAGCCGAGACG................................................................................................ 22 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................AGGGTATATTAGATTTGTGGT....................................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AAGAGCTAGAGCAACGAAATTTTG.. 24 0 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................................CAGCATGAATAGCCGAGACGA............................................................................................... 21 1 13 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................TCAGCATGAATAGCCGAGAC................................................................................................. 20 1 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAAGGAA........ 27 1 13 0.08 1 0 0 1 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAGTAGCCGAGA.................................................................................................. 23 1 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGATCGGCATCAATAGCCGAGA.................................................................................................. 23 1 14 0.07 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATACGAGCTAGAGCAACGAAA....... 27 1 14 0.07 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAATGAAA....... 27 1 14 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................ATTCTTGATCAGCATCAATAGACGAGA.................................................................................................. 27 1 16 0.06 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GACTATAAGAGCTAGAGCAACGAA........ 24 0 16 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTCATCAGAATCAATAGCCGAGACG................................................................................................ 25 2 17 0.06 1 0 0 0 1 0 0 0 0
..............................................................................................................................ATTCTTGATCAGCATCAATAGCCGAAAC................................................................................................. 28 1 17 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGATAAGCATCAATACCCGAGAAG................................................................................................ 25 3 18 0.06 1 0 0 0 0 1 0 0 0
......................................................................................................................................TCAGCATGAATAGCCGAGACGATC............................................................................................. 24 2 18 0.06 1 0 0 0 1 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGACGAGA.................................................................................................. 23 1 18 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTATAAGAGCTAGAGCAACGAA........ 22 0 18 0.06 1 0 1 0 0 0 0 0 0
..............................................................TGTGGTGAAAATGGATGTGTGTAAC.................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0
..................................................................GTGAAAATGGATGTGTGTAAC.................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................CTCAAAGACTATAAGAGCTAG................. 21 0 20 0.05 1 0 0 0 0 0 1 0 0
...................................................TATATTAGATTTGTGGTGAAA................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0
....................................................................................................................AAGTATATATATTCTTGATCAGCATCA............................................................................................................ 27 0 20 0.05 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TAAGAGCTAGAGCAACGAA........ 19 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATAAGAGCTAGAGCAACGAAA....... 21 0 20 0.05 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................TATAAGAGCTAGAGCAACGAA........ 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................GACGATTGAGCCATGTCTG................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACTATAAGAGCTAGAGCAACG.......... 21 0 20 0.05 1 0 0 0 0 0 0 1 0
........................................................TAGATTTGTGGTGAAAATGGAT............................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................AAAATGGATGTGTGTAACGTC................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................ATATTAGATTTGTGGTGAAAA.................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0 0 0 0
...........................................................................................................................TATATTCTTGATCAGCATCAATAGCC...................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................TCAAAGACTATAAGAGCT................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................ATTAGATTTGTGGTGAAAATG................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 1 0 0
.............................................................TTGTGGTGAAAATGGATGTGTGTAA..................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0
.........................................................AGATTTGTGGTGAAAATGGATG............................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................GGTGCTCGAAGAGTATAGGG......................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................................................GTTTGATCAGCATCAATAGCCGAGA.................................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................TGTGGTGAAAATGGATGTGT......................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 1 0
.....................................................TATTAGATTTGTGGTGAAAATGG............................................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGAATCT..... 29 2 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTCAAAGACTATAAGAGCTAGAGCAAC........... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................AGATTTGTGGTGAAAATGGA.............................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGCTAGAGCAACGAAATTT.... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................TTAGATTTGTGGTGAAAATGGATGT........................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................TAGCGCCTAGTGCTCAAAGA.............................. 20 0 20 0.05 1 0 0 0 0 0 1 0 0
...............................................................................................................CCATAAAGTATATATATTCTT....................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0
...........................................................ATTTGTGGTGAAAATGGATGTGTG........................................................................................................................................................................ 24 0 20 0.05 1 0 0 1 0 0 0 0 0
.............................................................TTGTGGTGAAAATGGATGTGT......................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0 0 0
............................................................TTTGTGGCGAAAATGGATGTGTG........................................................................................................................................................................ 23 1 20 0.05 1 0 0 1 0 0 0 0 0
................................................................TGGTGAAAATGGATGTGTGTAA..................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTAATCAGCATAAATAGCCGAGACGA............................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................TGTGGTGAAAATGGATGTG.......................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0
.................................................................GGTGAAAATGGATGTGTGTAAC.................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATAGCCAAGACGA............................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................CGTCCGTCCGTCTGTCCGTCCCC.................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGATCAGCATCAATACCCGGGA.................................................................................................. 23 2 20 0.05 1 0 0 0 0 0 0 1 0
.............................................................................TGTGTGTAACGTCCAGAAGA.......................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................TGAATGTGTGTAACGTCCAGAAGA.......................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 1 0 0
................................................................................................................CATAAAGTATATATATTCTT....................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCTTCTAAAGTTCGTCGGGAAAAATATGGGCCACGAGCTTCTCATATTCCCATATAATCTAAACACCACTTTTACCTACACACATTGCAGGTCTTCTTTCTCAAAGGCTGGGGTATTTCATATATATAAGAACTAGTCGTAGTTATCGGCTCTGCTAACTCGGTAAAGACAGACAGGCAGGCAGGCAGACAGGCAGGGGTAATCGCGGATCACGAGTTTCTGATATTCTCGATCTCGTTGCTTTAAAACAT
**************************************************************************************************...(((.(((....(((((((((((..(((..((((......)))).))).........)))))))))))....))).)))............************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 SRR902012
CNS imaginal disc
 V112
male body		 GSM343916
embryo
 M059
embryo
 M062
head
 GSM444067
head
.............................................................................................................................................................................................................CGGATCACGAGTTTCTGATATT........................ 22 0 20 29.60 592 592 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CGCGGATCACGAGTTTCTGATAT......................... 23 0 20 8.40 168 168 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CAGGCAGGCAGACAGGCAGGGGT................................................... 23 0 4 3.25 13 0 8 4 0 1 0 0 0 0
.................................................................................................................................................TCGGCTCTGCTAACTCGGTA...................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................................CGGCTCTGCTAACTCGGTA...................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................GGCTCTGCTAACTCGGTAAAGACAG............................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................................CTCGGTAAAGACAGACAGGCAGGCA.................................................................... 25 0 1 2.00 2 0 1 0 1 0 0 0 0 0
..............................................................................................................................................................CTCGGTAAAGACAGACAGGCAGGCAGGC................................................................. 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................................CGGTAAAGACAGACAGGCAGGCAGG.................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGCGGATCACGAGTTTCTGATATT........................ 25 0 20 1.65 33 0 0 33 0 0 0 0 0 0
...........................................................................................................................................................................................................CGCGGATCACGAGTTTCTGAT........................... 21 0 20 1.55 31 31 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CAGACAGGCAGGCAGGCAGACAGGCAG....................................................... 27 0 20 1.40 28 0 28 0 0 0 0 0 0 0
.........................................................................................................................................................................CAGACAGGCAGGCAGGCAGACAGGC......................................................... 25 0 20 1.20 24 0 24 0 0 0 0 0 0 0
...................................................................................................................................................................................GGCAGGCAGACAGGCAGGGGT................................................... 21 0 4 1.00 4 0 4 0 0 0 0 0 0 0
..............................................................................................................................................................CTCGGTAAAGACAGACAGGCAGGC..................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................CGGTAAAGACAGACAGGCAGGCAG................................................................... 24 0 2 1.00 2 0 1 1 0 0 0 0 0 0
....................................................................................................................................................................................GCAGGCAGACAGGCAGGGGT................................................... 20 0 4 0.75 3 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGCAGGCAGGCAGACAGGCAGGGGT................................................... 26 0 3 0.67 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................................CGCCTCTGCTAACTCGGTA...................................................................................... 19 1 2 0.50 1 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................GGCAGACAGGCAGGGGTAAT................................................ 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................GGCAGGCAGACAGGCAGGGGTAAT................................................ 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................GGCAGGCAGACTGGCAGGGGT................................................... 21 1 8 0.50 4 0 0 4 0 0 0 0 0 0
..............................................................................................................................................................................AGGAAGGCAGGCAGACAGGCAGGGGT................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................GCAGGCAGGCAGACAGGCAGGGGT................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CAGGCAGGCAGGCAGACAGGCAGGGGT................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................GGTAAAGACAGACAGGCAG....................................................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GGCAGGCAGGCAGACAGGCAGGGGT................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................................................................CAAAGGCTGGGGTATTTCAT.................................................................................................................................. 20 0 20 0.25 5 0 0 0 0 5 0 0 0 0
...........................................................................................................................................TACTTATCGGCTCTGCTAACTCGGT....................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AGGCAGGCAGACAGGCAGGGGT................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GATCTCGTTGCTTTAAAACAT 21 0 20 0.20 4 0 3 1 0 0 0 0 0 0
.....................................................................................................................................................................................CAGGCAGACAGGCAGGGGTA.................................................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTCGATCTCGTTGCTTTAAAACAT 24 0 16 0.19 3 0 0 3 0 0 0 0 0 0
...TCTAAGGTTCGTCCGCAAA..................................................................................................................................................................................................................................... 19 3 18 0.17 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTACTTATCGGCTCTGCTAA............................................................................................. 21 1 8 0.13 1 0 0 0 0 0 0 1 0 0
..........................................................................................................................................GTACTTATCGGCTCTGCTAAC............................................................................................ 21 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................CTTATCGGCTCTGCTAACTC.......................................................................................... 20 1 8 0.13 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AATCGCGGATCACGAGTTTCT.............................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................GCAGGCAGGCAGACAGGCA........................................................ 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................................................................TCAAAGGCTGGGGTATTTCATATA............................................................................................................................... 24 0 10 0.10 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................GGCAGGCAGACAGGCAGGGG.................................................... 20 0 20 0.10 2 0 0 0 0 2 0 0 0 0
...........................................................................CTACACACATTGCAGGTCTT............................................................................................................................................................ 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGGATCACGAGTTTCTGAT........................... 19 0 20 0.10 2 0 0 0 0 0 0 0 1 1
.........................................................................................................................................................................................................ATCGCGGATAACGAGTTTCTGATATT........................ 26 1 20 0.10 2 0 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................AATCGCGGATAACGAGTTTCTGATATT........................ 27 1 20 0.10 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................AGTCGTACTTATCGGCTCTGC................................................................................................ 21 1 12 0.08 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................GTCGTACTTATCGGCTCTGCT............................................................................................... 21 1 13 0.08 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GCAGGCAGACAGGCAAGGGT................................................... 20 1 13 0.08 1 0 0 0 1 0 0 0 0 0
....................................................................................................TCAAAGGCTGGGGTATTTCA................................................................................................................................... 20 0 13 0.08 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CGTACTTATCGGCTCTGCTA.............................................................................................. 20 1 14 0.07 1 1 0 0 0 0 0 0 0 0
.......................................................................TTACCTACACACATTGCAGGTCTACT.......................................................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTGGTAACTCGGCAAAGTC................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AATCGCGGATCACGAGTTTCTGATATT........................ 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..............................................................................CACACATTGCAGGTCTTCTT......................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGCGGATCACGAGTTTCTGAT........................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGGATCACGAGTTTCTGATATTCT...................... 24 0 20 0.05 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................CTGCTAACTCGGTACAGACAGACAG........................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATTGCGGATCACGAGTTTCTGATAT......................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATCGCGGATCACGAGTTTCTGATATT........................ 26 0 20 0.05 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TGATATCCTCAATCTCGTTGCTTTAA..... 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATCGCGGATCACGAGTTTCT.............................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATCTCGTTGCTTTAAAACAT 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................CTACACACATTGCAGGTCTTC........................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................ACCTACACACATTGCAGGTCTTCTTT........................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................ACACACATTGCAGGTCTACT.......................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTCTCGATCTCGTTGCTTTAA..... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACAGGCAGGCAGGCAGACAGGCAG....................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................ACACACATTGCAGGTCTTCTT......................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................TACACACATTGCAGGTCTTCT.......................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................CCTACACACATTGCAGGTCTTCTTT........................................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................AGGCAGGCAGGCAGACAGG.......................................................... 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0
...............................................................................ACACATTGCAGGTCTTCTT......................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................TCAAAGGCTGGGGTATTTAAT.................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CGCGGATCACGAGTTTCTGATATTC....................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0
.................................................CCATATAATCTAAACACCACTT.................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TCGGCTCTGCTAACTCGGTACA.................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTCCTTATCGGCTCTGCTAA............................................................................................. 21 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group4:4029735-4029985 + dps_1677 AGAAG-ATT------TCAAG----CA----GC--CCTTTTTATACCCGGTGCTCGA-------AGAGTATAAGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGAA-AGAGTTTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGACGATTGAGCCATTTCTGTCTGTCCGTCCGTCCGTCTGTCCGTCCC--------CATTAGCGCC--TAGT----GCTCAAAGACTATAAGAGCTAGAGCAAC--GAAATTTTGTA
droPer2 scaffold_10:3052986-3053244 + AGAAG-ATT------TCAAG----CA----GC--CGTTTTTATACCCGGTGCTCGA-------AGAGTATAGGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGAA-AGAGTTTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCAATGGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCCGTCCGTCCGTCTGTCCGTCCCCATTAGCGCC--TAGT----GCTCAAAGACTATAAGAGCTAGAGCAAC--GAAATTTTGTA
droWil2 scf2_1100000004956:526848-527087 - AGAAT-TTA------TCGGG----CA----AC--AGTTTTTATACCATACACCCAT-------AGGGTGAAATGGTATATTAAAGTCGCCAAA-------ATGTATGTAACAGGTAGAAGGA-AGCATCTCCGACCCCACAAAGTATAT----ATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCCGTCTGTCCG------------TATGAACACC--TAGA----TCTCGGAGACTGTAAGAGCTAGAGCCAC--CAAATTTGGTA
droVir3 scaffold_12855:7364326-7364588 - AGAGT-TTT------TTGAT----CG----CC--TTTTTTTATACCCTGAACCCATTAAAAT-TGGGTATAAGGGTATATTGTATTTGTGCAAAATCCAAATGTATGTAACAGGCAGAAGGA-AGCATCTCCGACCCCATAATGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCCGTCCGTCCGTCCGTCCGTATG----TATGAACGCA--AGGA----TCTCAGAACCTATAAGAGCTAGAGACTAGAGAAATTTTAGA
droMoj3 scaffold_6473:7592400-7592649 - AGAGATATT------TCAAT----------TC--AATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTAAATTGGTTTTGTGAAA-------AAGTATGTAACGGGCAGAAGGA-GGCGTGGCAGACTCCACAAAGTATAT----ATATTCTTGATCAGCGTGACGAGCTGAGTCGATATAGCCCTGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTCCG--------TATGAGTGCG--TCGA----TCTCAGAAGTTATAAGAGCTAGAGAGCT--GAAATTTGGCA
droGri2 scaffold_15074:3695316-3695559 + AATA---TA------GCAAG----CT----G---TCTTTTTATACCCTGAACCCATTAAAAATGGGTAAATAGGGTATAATGGTTTTGAGCAA-------ATGTATGTAACAGGCAGAAGAA-AGCATCTCCGACCCCATAAAGTATATATGTATATTCTAGATCAAGGTCAACAGCCGAGTCGATATAGCCATGTCCGCCTGTTCGTCCGTCAGTCT--------G--------AATGAACACG--CAGA----GCTCAGAGACAATAAGAGCTAGAGACTT--CAAATTTGGAA
droAna3 scaffold_13767:1232045-1232276 + AGAAG-CTT------GCCCCATG-CA----CG--CATTTTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGGTCAA-------AAGTGTGCAACGCAGTGAAGGA-GACATCTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCTGTCCG------------TTTCTACGCA--AACTAGTCTCTC----AGTTTTAAAGCTATCGAGTT--GAAACTTTGCA
droBip1 scf7180000396710:177557-177783 - T-------TTCAATTA-GAT----CC----AC--CATTTTTATATCCGGTACTCCT-------AGAGTACAAGGGTATATTGTAGTCGTATGT-------ATGTATGTAACATCGAGAAGGA-ATC------------ATAAATTTTAT----ATATTCTTGATCAGCATCAACAGCCTAGTCGATATAGCCATGTCCGTCTGTCCGTCCGTCCGTCTGTCTG------------TATGAACGCG--TGGA----TCTCAGAGACTATAAGAGATAGAGCTAT--AGGATTTGGCA
droKik1 scf7180000302543:11223-11451 + AAAAT-GT--------AATG----AA----AC--TCTTTTTATACCCTT--------------------GCAGGGTATTATAATTTCAGTCAG-------AAGTTTGCAACGCAGTGAAGGA-GACGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGCATCAACAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCCGTCCGTCTGTCCG--------TTTCTACGCA--AACT----AGTCCCTCAGTTTTTAAGCTATCTGAAT--GAAACTTTGCA
droFic1 scf7180000452466:556-796 - AGAT----T------TGATG----CTGTTTAG--CCTTTTTATACCCT-----TGC-------AGGGCAAAAGGGTATTATAATTTCAGTCAG-------AAGTTTGCAACGCAGTGAAGGA-GACACCTCAGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCACGAGCAGAATCGAAATATGTATGTACGTCTGTCCGTCTGTCCGTCTGTCCGTCTGTCCG----TTTCCGCGCA--AACT----AGTCTCTCACTTTTAAAGCTATCGTGCT--GAAACTTT---
droEle1 scf7180000491269:7471-7704 + A------TT------CCAAA----AC----AA--AGTATTTATACAAGTTACTCGC-------AGAGTAAAAGGGTAT--TGTATTCGATGAA-------AATTGTGTAAAAAGTAGAAGGA-AGTGTTTCCGAACCTATAAAGTATAT----ATATTCTTGATCAGGATCAA---CCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGCCTGTCCATCTG--------TATGAACGTC--GAGA----TCTCGGAAATTATTAAAGCAAGAGATTT--GAGACTTGGCA
droRho1 scf7180000777435:3870-4114 - AGTAT-ATT------GCAATCA---A----TT--CATATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATATTGTATTCGTGCAA-------AAGTATGTAACAGCTAGAAGGA-AGCGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCCGTCTGTCTGTCCG--------TATGAACGCT--GAGA----TCTCGGAAACTATAAAAGCTAGAAGATT--GGCATTTTGCA
droBia1 scf7180000299959:47235-47476 - AAAAT-GT--------CA------------TA--CATTTTTATACCCGTTAGTCGT-------AGAATAAAAGGGTATACTACATTCGTCGGA-------AAGTATGTAACAGGTAAAATGAAAGCGTTTCCGATTCCAAAAAGTATAT----ATATCCTTGATCAGGATCACTAGCCGAATCGATCTTGCCATGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTCCGTCCG-----CTGAACGTT--GAGA----TCTTGGAAACTATAAGAGCTAGAACAGT--CGAACTTGGCA
droTak1 scf7180000415356:349342-349581 - GAACA-GTT------C-AAG-----------G--CGTTTTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGATTCGTGCAA-------AAGTATGTAACAGCTAGAAGGA-AGCGTTTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCTGTCCGTCTG--------TATGAACGCT--GAGA----TCTCAGAAACTACAAAAGCTAGAAGATT--GAGATTTCCCA
droEug1 scf7180000409384:18313-18554 - AGAGA-ATT------TA--G----CA----AC--AGTTTTTATACCCGTTACTCGT-------AAAGTAAAAGGGTATACTAGATTCGTTGAA-------AAGTATGTAACAGATAGAAGAA-AGCGTTTGCGACCCTATAAAGTATAT----ATATTCTTGATCAGGATAAATAGCGAAGTTGATTGAGCCATGTCCGTCTATCCGTCCGTCCGTCCGTCCGTCCG--------TATGAACGCT--GAGA----TCTCAGGAACTATAACAGATACAAAATT--GAGATTAACCA
dm3 chrU:155602-155833 - TC---------------AAA----TT----GC--TATATTTATACCCGTTACTCGT-------ATAGTA-AAGGGTATAGTAGATTCGTTGAA-------AAATATGTAACAGGCAGAGGGA-AGAGTTTCCGATTATGTAAAGTATAC----ATATTCTTGATAAGGGTCAATAGCCGAGACGATCTAGCCATGTCCGTCTGTCCGCCCGTCCGACAGTACG------------TATGAACGTGTCGAGA----TCTCAGA-ACTATAAAAGCTAGAAGGTT--GAGATTAAGCG
droSim2 x:20826137-20826370 + GAAAA-CTT------TAAGTCAGAT-----CGCATTTTGTTATACCCATTAGTCGT-------AGAGTAAAAGGGTATACTAGATTCGTTGAA-------AAGTATGTAACAGGCAGAAGAA-AGCGTTACCCACCATATTACGTATAT----ATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTAGCCATGTC-ATCTGTCCGTCCGGCC------------G--------TATGAACGTC--GAGA----TCTCAGGAACTA--GAAGCTAGAGAGTT--GATATTAAGTA
droSec2 scaffold_39:324148-324383 + GAAAA-CTT------TAAGTCAGAT-----CTCATTTTGTTATACCCATTAGTCGT-------AGAGTAAAAGGGTATACTAGATTCGTTGAA-------AAGTATGTAACAGGCAGAAGAA-AGCGTTACCCACCATATTACGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTC-ATCTGTCCGTCCGGCC------------G--------TATGAACGTC--GAGA----TCTCAGGAACTATAGAAGCTAGAGAGTT--GATATTAAGTA
droYak3 4:90594-90831 + AAATA-ATT------TCAAG----CA----G----ACATATATACCCGTTACTCGT-------AGAGTAAAGGGGTATACTAGATTTGTTGAA-------AAGTATGTAACAGGCAGAAGGA-AGCGTTTCCGACCATATAAAGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTCCGTCTGTCCGTCCGTCTGTCTGTCCG------------TATGAACGTC--GAGA----TCTCAAGAACTACAAAATCTAGAAAGTT--CAGATTAAGCA
droEre2 scaffold_4845:5043707-5043942 - TC---------------AAG-TGGC-----TG--CATTTTTATACCCGCTACTCCT-------AGAGTAAAAGGGCATGCTAGATTCGTTGAA-------AAGTATGTAACAGGCAGAAGGA-AGCGTTTCCGACCATGTAAAGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTCGAACTGGCCATGTTTGTCTGTCCGTCCGTCCGCCTGTCCG------------TATGAACGGACATGGA----TCTCAGGAACTACAAAAGTTAGAATGTT--GAGATTAAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGAAG-ATT------TCAAG----CA----GC--CCTTTTTATACCCGGTGCTCGA-------AGAGTATAAGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGAA-AGAGTTTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGACGATTGAGCCATTTCTGTCTGTCCGTCCGTCCGTCTGTCCGTCCC--------CATTAGCGCC--TAGT----GCTCAAAGACTATAAGAGCTAGAGCAAC--GAAATTTTGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAA........26834.00272010980100137170
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAA..............222029.10582000000058200
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAA.......27823.7519004660001101351
..................................................................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGC................222012.95259000000002590
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGA..................................................................................................................2378.8662052100000000
....................................................................................TTTGTGGTGAAAATGGATGT................................................................................................................................................................................................20204.358708500200000
.....................................................................................TTGTGGTGAAAATGGATGTGTG.............................................................................................................................................................................................22204.008008000000000
....................................................................................TTTGTGGTGAAAATGGATGTG...............................................................................................................................................................................................21203.707400400000700
............................................................................................................................................................................ATAGCCGAGACGATTGAGCC........................................................................................................2033.33100820000000
.............................................................................................................................................................................TAGCCGAGACGATTGAGCCAT......................................................................................................2113.0030300000000
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGACGATT.............................................................................................................2832.3370100000060
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAAT......2872.29160510000280
.....................................................................................TTGTGGTGAAAATGGATGTGTGT............................................................................................................................................................................................23202.054103900000200
.............................................................................................................................................................................TAGCCGAGACGATTGAGCCA.......................................................................................................2012.0020200000000
..................................................................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAAC--GA.........27201.953900390000000
...................................................................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAAC--GAA........2781.75140600000800
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAAA......28111.09120500000430
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGAC.................................................................................................................2461.0060240000000
..................................................................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAAC--GAA........2881.0080320000300
.............................................................................................................................................................................TAGCCGAGACGATTGAGCC........................................................................................................1931.0030210000000
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--G..........24200.801600001600000
...................................................................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAAC--GAAA.......2880.7560200000220
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGACGA...............................................................................................................2660.6740100000030
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGACG................................................................................................................2560.6740400000000
......................................................................................TGTGGTGAAAATGGATGTGTGTAA..........................................................................................................................................................................................24200.651301200100000
....................................................................................TTTGTGGTGAAAATGGATGTGT..............................................................................................................................................................................................22200.601200120000000
......................................................................................TGTGGTGAAAATGGATGTGTG.............................................................................................................................................................................................21200.50100000100900
.....................................................................................................................................................................................................................................................................AGACTATAAGAGCTAGAGCAAC--GAAA.......26140.5070400000300
.....................................................................................................................................................................................................................................................................AGACTATAAGAGCTAGAGCAAC--GAA........25150.4770700000000
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAT.......27180.4480100000340
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGACGAT..............................................................................................................2750.4020100001000
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAG.......27200.4080000000080
...............................................................................................................................................................................................................TCCGTCCGTCTGTCCGTCCC--------C............................................................21200.3570700000000
...........................................................................................................................................................................AATAGCCGAGACGATTGAGCC........................................................................................................2130.3310100000000
............................................................................................................................................................TTCTTGATCAGCATCAATAGCCGAGA..................................................................................................................2660.3320200000000
.................................................................................................................................................................................................................................................................TCAAAGACTATAAGAGCTAGAG.................22200.3060000000060
................................................................................................................................................................TGATCAGCATCAATAGCCGAGA..................................................................................................................2280.2520200000000
..........................................................................................................................................................................................TGAGCCATTTCTGTCTGTCCG.........................................................................................2140.2510100000000
...........................................................................................................................................................................AATAGCCGAGACGATTGAG..........................................................................................................1940.2510100000000
......................................................................................................................................................................................................GTCTGTCCGTCCGTCCGTC...............................................................................19200.2550500000000
.........................................................................................................................................................................................................................................................GT----GCTCAAAGACTATAAGAGC......................21200.2040400000000
................................................................................................................................................................TGATCAGCATCAATAGCCGAG...................................................................................................................21200.2040000040000
........................................................................................................................................................................................................................................................AGT----GCTCAAAGACTATAAGAG.......................21200.2040400000000
..................................................................................................................................................................................................TTCTGTCTGTCCGTCCGTCC..................................................................................2050.2010100000000
................................................................................................................................................................TGATCAGCATCAATAGCCGAGACGA...............................................................................................................2560.1710100000000
................................................................................................................................................................TGATCAGCATCAATAGCCGAGACG................................................................................................................2460.1710100000000
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAATTTC...31120.1720000000200
........................................................................................TGGTGAAAATGGATGTGTGTA...........................................................................................................................................................................................21200.1530000000300
.....................................................................................................................................................................................................TGTCTGTCCGTCCGTCCGTCTGT............................................................................23200.1530300000000
.............................................................................................................................................................TCTTGATCAGCATCAATAGCCGAGA..................................................................................................................2570.1410100000000
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAATTT....3070.1410000000010
............................................................................................................................................................TTCTTGATCAGCATCAATAG........................................................................................................................20200.1020000000020
....................................................................................TTTGTGGTGAAAATGGATGTGTG.............................................................................................................................................................................................23200.1020000020000
............................................................................................GAAAATGGATGTGTGTAACG........................................................................................................................................................................................20200.1020100000010
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAC.......27100.1010000000100
...............................................................................................................................................................TTGATCAGCATCAATAGCCGAGAAA................................................................................................................25200.1020200000000
..........................................................................GTATATTAGATTTGTGGTGA..........................................................................................................................................................................................................20200.1020000000020
........................................................................................................GTGTAACGTCCAGAAGAA-AG...........................................................................................................................................................................20120.0810100000000
.......................................................................AGGGTATATTAGATTTGTGGT............................................................................................................................................................................................................21130.0810100000000
............................................................................................................................................................................................................................................................................AAGAGCTAGAGCAAC--GAAATTTTG..24130.0810100000000
......................................................................................................................................................................................................................................................................GACTATAAGAGCTAGAGCAAC--GAA........24160.0610100000000
........................................................................................................................................................................................................................................................................CTATAAGAGCTAGAGCAAC--GAA........22180.0610000000100
......................................................................................TGTGGTGAAAATGGATGTGTGTAAC.........................................................................................................................................................................................25200.0510000000010
..........................................................................................GTGAAAATGGATGTGTGTAAC.........................................................................................................................................................................................21200.0510000001000
................................................................................................................................................................................................................................................................CTCAAAGACTATAAGAGCTAG...................21200.0510000001000
...........................................................................TATATTAGATTTGTGGTGAAA........................................................................................................................................................................................................21200.0510000001000
.............................................................................................................................................AAGTATAT----ATATTCTTGATCAGCATCA............................................................................................................................27200.0510000000100
...........................................................................................................................................................................................................................................................................TAAGAGCTAGAGCAAC--GAA........19200.0510100000000
..........................................................................................................................................................................................................................................................................ATAAGAGCTAGAGCAAC--GAAA.......21200.0510000000010
.........................................................................................................................................................................................................................................................................TATAAGAGCTAGAGCAAC--GAA........21200.0510100000000
.......................................................................................................................................................................................................................................................................ACTATAAGAGCTAGAGCAAC--G..........21200.0510000010000
................................................................................TAGATTTGTGGTGAAAATGGAT..................................................................................................................................................................................................22200.0510000000010
.............................................................................................AAAATGGATGTGTGTAACGTC......................................................................................................................................................................................21200.0510100000000
............................................................................ATATTAGATTTGTGGTGAAAA.......................................................................................................................................................................................................21200.0510000000010
....................................................................................................................................................T----ATATTCTTGATCAGCATCAATAGCC......................................................................................................................26200.0510010000000
.................................................................................................................................................................................................................................................................TCAAAGACTATAAGAGCT.....................18200.0510100000000
..............................................................................ATTAGATTTGTGGTGAAAATG.....................................................................................................................................................................................................21200.0510000001000
.....................................................................................TTGTGGTGAAAATGGATGTGTGTAA..........................................................................................................................................................................................25200.0510000000010
.................................................................................AGATTTGTGGTGAAAATGGATG.................................................................................................................................................................................................22200.0510100000000
......................................................................................TGTGGTGAAAATGGATGTGT..............................................................................................................................................................................................20200.0510000010000
.............................................................................TATTAGATTTGTGGTGAAAATGG....................................................................................................................................................................................................23200.0510000000010
................................................................................................................................................................................................................................................................CTCAAAGACTATAAGAGCTAGAGCAAC--...........27200.0510100000000
.................................................................................AGATTTGTGGTGAAAATGGA...................................................................................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................AGCTAGAGCAAC--GAAATTT....19200.0510100000000
...............................................................................TTAGATTTGTGGTGAAAATGGATGT................................................................................................................................................................................................25200.0510000000010
..............................................................................................................................................................................................................................................TAGCGCC--TAGT----GCTCAAAGA................................20200.0510000001000
........................................................................................................................................CCATAAAGTATAT----ATATTCTT.......................................................................................................................................21200.0510010000000
...................................................................................ATTTGTGGTGAAAATGGATGTGTG.............................................................................................................................................................................................24200.0510000000010
.....................................................................................TTGTGGTGAAAATGGATGTGT..............................................................................................................................................................................................21200.0510000000010
........................................................................................TGGTGAAAATGGATGTGTGTAA..........................................................................................................................................................................................22200.0510100000000
......................................................................................TGTGGTGAAAATGGATGTG...............................................................................................................................................................................................19200.0510000000100
.........................................................................................GGTGAAAATGGATGTGTGTAAC.........................................................................................................................................................................................22200.0510100000000
.............................................................................................................................................................................................................CGTCCGTCCGTCTGTCCGTCCC--------C............................................................23200.0510100000000
.....................................................................................................TGTGTGTAACGTCCAGAAGA...............................................................................................................................................................................20200.0510100000000
.........................................................................................................................................CATAAAGTATAT----ATATTCTT.......................................................................................................................................20200.0510000000010
droPer2
AGAAG-ATT------TCAAG----CA----GC--CGTTTTTATACCCGGTGCTCGA-------AGAGTATAGGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGAA-AGAGTTTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCAATGGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCCGTCCGTCCGTCTGTCCGTCCCCATTAGCGCC--TAGT----GCTCAAAGACTATAAGAGCTAGAGCAAC--GAAATTTTGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAAC--GA.........272019.3038603860000
...................................................................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAAC--GAA........27200.459090000
...............................................................................................................................................................TTGATCAGCATCAATGGCCGA....................................................................................................................21110.364020110
...................................................................................................................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAAC--GAAA.......28200.306600000
...........................................................................................................................................................................AATGGCCGAGTCGATTGAGC.........................................................................................................2070.292010010
..............................................................................................................................................................CTTGATCAGCATCAATGGCCG.....................................................................................................................21120.253020100
.............................................................................TATTAGATTTGTGGTGAAAATGG....................................................................................................................................................................................................23200.255050000
...............................................................................................................................................................TTGATCAGCATCAATGGCCGAGTCGAT..............................................................................................................2750.201010000
..........................................................................................................................................................................CAATGGCCGAGTCGATTGAG..........................................................................................................20100.202000002
........................................................................................................................................................................ATCAATGGCCGAGTCGATTGA...........................................................................................................21100.202000002
........................................................................................................................................................................ATCAATGGCCGAGTCGATTG............................................................................................................20100.202001010
.....................................................................................................................................................................AGCATCAATGGCCGAGTCGAT..............................................................................................................21110.182010010
...............................................................................................................................................................TTGATCAGCATCAATGGCCGAGT..................................................................................................................23110.182020000
....................................................................................................................................................................CAGCATCAATGGCCGAGTCGA...............................................................................................................21120.172020000
....................................................................................................................................................................CAGCATCAATGGCCGAGTCGATTGA...........................................................................................................2570.141100000
.........................................................................................................................................................................TCAATGGCCGAGTCGATTGAGC.........................................................................................................2270.141000100
..........................................................................................................GTAACGTCCAGAAGAA-AG...........................................................................................................................................................................18140.142200000
....................................................................................................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAC--GAAA.......27200.102200000
............................................................................................................................................................TTCTTGATCAGCATCAATGGCCGAGT..................................................................................................................26100.101010000
........................................................................................................................................................................ATCAATGGCCGAGTCGATTC............................................................................................................20200.102000002
.........................................................................................................................................................................TCAATGGCCGAGTCGATTGAG..........................................................................................................21100.101010000
.............................................................................................................................................................TCTTGATCAGCATCAATGGCCGAG...................................................................................................................24110.091010000
.................................................................................................................................................................GATCAGCATCAATGGCCGAG...................................................................................................................20110.091010000
...............................................................................................................................................................TTGATCAGCATCAATGGCCGAGTC.................................................................................................................24110.091000001
.............................................................................................................................................................TCTTGATCAGCATCAATGGCCGA....................................................................................................................23110.091010000
................................................................................................................................................................TGATCAGCATCAATGGCCGAGT..................................................................................................................22110.091010000
...........................................................................................................................................................................AATGGCCGAGTCGATTGAG..........................................................................................................19120.081000001
..............................................................................................................................................................CTTGATCAGCATCAATGGCC......................................................................................................................20140.071000100
...............................................................................................................................................................TTGATCAGCATCAATGGCC......................................................................................................................19150.071010000
...............................................................................................................................................................TTGATCAGCATCAATGGC.......................................................................................................................18170.061010000
.......................................................................................................TGTGTAACGTCCAGAAGAA-.............................................................................................................................................................................19200.051010000
...............................................................................TTAGATTTGTGGTGAAAATGGAT..................................................................................................................................................................................................23200.051000001
.....................................................................................................TGTGTGTAACGTCCAGAAGAA-.............................................................................................................................................................................21200.051000010
...........................................................................................TGAAAATGGATGTGTGTAACGT.......................................................................................................................................................................................22200.051000001
....................................................................ATAGGGGTATATTAGATTTGTGGT............................................................................................................................................................................................................24200.051001000
..................................................................................................................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAAC--GAA........28200.051010000
..........................................................................................GTGAAAATGGATGTGTGT............................................................................................................................................................................................18200.051010000
.......................................................................................................................................................................................................................TCCGTCCGTCTGTCCGTCCC.............................................................20200.051000001
..........................................................................................................................................................................................................................................................................ATAAGAGCTAGAGCAAC--GAA........20200.051000001
...............................................................................................AATGGATGTGTGTAACGTC......................................................................................................................................................................................19200.051000001
droWil2
AGAAT-TTA------TCGGG----CA----AC--AGTTTTTATACCATACACCCAT-------AGGGTGAAATGGTATATTAAAGTCGCCAAA-------ATGTATGTAACAGGTAGAAGGA-AGCATCTCCGACCCCACAAAGTATAT----ATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCCGTCTGTCCG------------TATGAACACC--TAGA----TCTCGGAGACTGTAAGAGCTAGAGCCAC--CAAATTTGGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................TGTATGTAACAGGTAGAAGGA-AGCAT........................................................................................................................................................................2680.63500050
...........................................................................................................TAACAGGTAGAAGGA-AGCATCTCC....................................................................................................................................................................2470.57402020
.......................................................................................................TATGTAACAGGTAGAAGGA-AGCATCT......................................................................................................................................................................2670.43301020
.........................................................................................................TGTAACAGGTAGAAGGA-AGCATCTC.....................................................................................................................................................................2580.25201010
.............................................................................................................ACAGGTAGAAGGA-AGCATCTC.....................................................................................................................................................................2180.25200020
..............................................................................................................CAGGTAGAAGGA-AGCATCTCCG...................................................................................................................................................................2270.14100010
........................................................................................................ATGTAACAGGTAGAAGGA-AGCATCTC.....................................................................................................................................................................2670.14100010
.......................................................................................................TATGTAACAGGTAGAAGGA-AGCATC.......................................................................................................................................................................2570.14100010
.....................................................................................................TGTATGTAACAGGTAGAAGGA-AGC..........................................................................................................................................................................24150.13200020
.....................................................................................................TGTATGTAACAGGTAGAAGGA-AGCA.........................................................................................................................................................................2580.13101000
..........................................................................................................GTAACAGGTAGAAGGA-AGCATCTC.....................................................................................................................................................................2480.13101000
...........................................................................................................TAACAGGTAGAAGGA-AGCATCTC.....................................................................................................................................................................2380.13100010
...........................................................................................................TAACAGGTAGAAGGA-AGCATC.......................................................................................................................................................................2180.13100010
......................................................................................................GTATGTAACAGGTAGAAGGA-AGCAT........................................................................................................................................................................2580.13100010
.........................................................................................................TGTAACAGGTAGAAGGA-AGCA.........................................................................................................................................................................2190.11101000
.......................................................................................GCCAAA-------ATGTATGTAACAGGTAGA..................................................................................................................................................................................24190.11202000
.........................................................................................CAAA-------ATGTATGTAACAGGTAG...................................................................................................................................................................................21200.10202000
.........................................................................................................................................................................................................................................................................TGTAAGAGCTAGAGCCAC--CAAATT.....24200.10202000
............................................................................................A-------ATGTATGTAACAGGTAGAAGGA-A............................................................................................................................................................................24150.07100010
.......................................................................................................TATGTAACAGGTAGAAGGA-A............................................................................................................................................................................20180.06100010
........................................................................................................ATGTAACAGGTAGAAGGA-.............................................................................................................................................................................18190.05100100
.............................................................................................................ACAGGTAGAAGGA-AGCATCTT.....................................................................................................................................................................21200.05100010
..................................AGTTTTTATACCATACACCCAT-------AGGG.....................................................................................................................................................................................................................................26200.05101000
droVir3
AGAGT-TTT------TTGAT----CG----CC--TTTTTTTATACCCTGAACCCATTAAAAT-TGGGTATAAGGGTATATTGTATTTGTGCAAAATCCAAATGTATGTAACAGGCAGAAGGA-AGCATCTCCGACCCCATAATGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCCGTCCGTCCGTCCGTCCGTATG----TATGAACGCA--AGGA----TCTCAGAACCTATAAGAGCTAGAGACTAGAGAAATTTTAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................TAAGAGCTAGAGACTAGAGAAATTT....2520.501000000000000000000000000001000000000000000000000000000000000000
...............................................................................................TCCAAATGTATGTAACAGGCAGAAGGA-A............................................................................................................................................................................28200.306000000000000000000000000000000000000060000000000000000000000000
....................................................................................................................................................................................................................................................................GAACCTATAAGAGCTAGAGACTAGAGA.........2740.251001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GA----TCTCAGAACCTATAAGAGCT.....................22200.153000000000000000000003000000000000000000000000000000000000000000
.........................................................................................................TGTAACAGGCAGAAGGA-AGCATCTC.....................................................................................................................................................................25200.102000000000000000000000000000000000020000000000000000000000000000
...........................................................................................................................................................................AATAGCCGAGTCGATCTAGC.........................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGTATGTAACAGGCAGAAGGA-AGCA.........................................................................................................................................................................25200.102000000000000000000000000002000000000000000000000000000000000000
....................................................................................................................................................T----ATATTCTTGATCAGCATCAATAGCCG.....................................................................................................................27200.102002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GA----TCTCAGAACCTATAAGAGC......................21200.102000000000000000000000000002000000000000000000000000000000000000
................................................................................................................................................................TGATCAGCATCAATAGCCGAGTCGATC.............................................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
................................................................................................................................................................TGATCAGCATCAATAGCCGAGTCG................................................................................................................24200.102000000000000000000000000000002000000000000000000000000000000000
.......................................................TTAAAAT-TGGGTATAAGGGTATATTGT.....................................................................................................................................................................................................................27130.081000000000000000000000000001000000000000000000000000000000000000
.................................................AACCCATTAAAAT-TGGGTATAAGGGT............................................................................................................................................................................................................................26130.081000000000000000000000000000000000000100000000000000000000000000
.......................................................TTAAAAT-TGGGTATAAGGGTATATTG......................................................................................................................................................................................................................26130.081000000000000000000000000000000000010000000000000000000000000000
.......................................................TTAAAAT-TGGGTATAAGGGTATAT........................................................................................................................................................................................................................24140.071000000000000000000000000001000000000000000000000000000000000000
...............................................................................................TCCAAATGTATGTAACAGGCAGAAGG...............................................................................................................................................................................26200.051000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TCTCAGAACCTATAAGAGCTA....................21200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................TAGCCGAGTCGATCTAGCCATGT....................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................TCCGTCTGTCTGTCCGTCCGTC...............................................................................22200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................ATG----TATGAACGCA--AGGA----TCTCAGAAC................................26200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................T----ATATTCTTGATCAGCATCAAT..........................................................................................................................22200.051000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................GCCATGTCCGTCTGTCTGTCC......................................................................................21200.051000000000100000000000000000000000000000000000000000000000000000
..............................................................................................ATCCAAATGTATGTAACAGGCAGA..................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TCCGTATG----TATGAACGCA--AGGA----TCTCA....................................27200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................GTATAAGGGTATATTGTATTTGTGC.............................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
......................................................................................TGTGCAAAATCCAAATGTATG.............................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................TCGATCTAGCCATGTCCGTCTG.............................................................................................22200.051000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCAGAACCTATAAGAGCTAGAGACT..............25200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATCT............................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................GAAGGA-AGCATCTCCGACCCCATA...........................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................CAGGCAGAAGGA-AGCATCTCCGACC................................................................................................................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................CGCA--AGGA----TCTCAGAACCTAT............................21200.051000000000000000000000000000000000000001000000000000000000000000
.....................................................................TAAGGGTATATTGTATTTGTGC.............................................................................................................................................................................................................22200.051000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CTGTCTGTCCGTCCGTCCGTCC..........................................................................22200.051010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATTCTTGATCAGCATCAATAGCC......................................................................................................................24200.051000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................TGTATAT----ATATTCTTGATCAG.................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................AGCATCAATAGCCGAGTCGA...............................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................TAACAGGCAGAAGGA-AGCATCTCCGACC................................................................................................................................................................28200.051000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................TCTTGATCAGCATCAATAGCC......................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
AGAGATATT------TCAAT----------TC--AATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTAAATTGGTTTTGTGAAA-------AAGTATGTAACGGGCAGAAGGA-GGCGTGGCAGACTCCACAAAGTATAT----ATATTCTTGATCAGCGTGACGAGCTGAGTCGATATAGCCCTGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTCCG--------TATGAGTGCG--TCGA----TCTCAGAAGTTATAAGAGCTAGAGAGCT--GAAATTTGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
AGAGATATT------TCAAT----------TC--AATTTTTATA............................................................................................................................................................................................................................................................2630.331100000
..........................................................................................................................................................................................ATAGCCCTGTCCGTCTGTCCG.........................................................................................21200.153300000
.....................................................................................................................................................................................................CGTCTGTCCGTCCGTCCGTCC..............................................................................21200.153000003
.......................................................TTGAAAATGGGAAATCAGGG.............................................................................................................................................................................................................................20200.102200000
.......................................................TTGAAAATGGGAAATCAGGGTA...........................................................................................................................................................................................................................22200.102200000
.................................................................................................................................................................................TGAGTCGATATAGCCCTGTCCGTCTG.............................................................................................26200.102000020
..............................TC--AATTTTTATACCCTGAACCCATTG..............................................................................................................................................................................................................................................26190.051100000
........................................................................................................................................................................................................CTGTCCGTCCGTCCGTCCGTCC..........................................................................22200.051100000
.....................................................................................................................................................................AGCGTGACGAGCTGAGTCGATATAGCC........................................................................................................27200.051000010
..................................................................................................................................................................................GAGTCGATATAGCCCTGTCCGTCTG.............................................................................................25200.051100000
................................................................................................................................................................................................................................................GTGCG--TCGA----TCTCAGAAGTTA.............................21200.051100000
...........................................................................................................................................................................................................................TCCGTCCG--------TATGAGTGCG--TCGA----TCT......................................25200.051100000
................................................................................TGGTTTTGTGAAA-------AAGTATGTAACGG.......................................................................................................................................................................................26200.051100000
.........................................................................................................................................CACAAAGTATAT----ATATTCTTGATC...................................................................................................................................24200.051100000
droGri2
AATA---TA------GCAAG----CT----G---TCTTTTTATACCCTGAACCCATTAAAAATGGGTAAATAGGGTATAATGGTTTTGAGCAA-------ATGTATGTAACAGGCAGAAGAA-AGCATCTCCGACCCCATAAAGTATATATGTATATTCTAGATCAAGGTCAACAGCCGAGTCGATATAGCCATGTCCGCCTGTTCGTCCGTCAGTCT--------G--------AATGAACACG--CAGA----GCTCAGAGACAATAAGAGCTAGAGACTT--CAAATTTGGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AGAAG-CTT------GCCCCATG-CA----CG--CATTTTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGGTCAA-------AAGTGTGCAACGCAGTGAAGGA-GACATCTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCTGTCCG------------TTTCTACGCA--AACTAGTCTCTC----AGTTTTAAAGCTATCGAGTT--GAAACTTTGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................ACCTCCTGAGTCGATATGAGC........................................................................................................21201.35270000027
.......................................................................................................TGTGCAACGCAGTGAAGGA-GACAT........................................................................................................................................................................24200.80160000160
...........................................................................................................CAACGCAGTGAAGGA-GACA.........................................................................................................................................................................19200.459000009
...................................................................................................................TGAAGGA-GACATCTCCGACCCC..............................................................................................................................................................22200.306060000
..............................................................................................................................................................................TCCTGAGTCGATATGAGCATGTCCG.................................................................................................25200.306006000
...............................................................................................................................................................................CCTGAGTCGATATGAGCATGTCCGTCT..............................................................................................27200.153030000
..............................................................................................................CGCAGTGAAGGA-GACATCTCCGA..................................................................................................................................................................23200.153300000
........................................................................................GTCAA-------AAGTGTGCAACGCAGT....................................................................................................................................................................................21200.102020000
..................................................................................................................................................TAT----ATATTCTTGATCAGGATCACCT.........................................................................................................................25200.102020000
...........................................................................................AA-------AAGTGTGCAACGCAGTGA..................................................................................................................................................................................20200.051010000
..............................................................................................................................................................................................GCATGTCCGTCTGTCCGTCTGTCC..................................................................................24200.051010000
.............................................................................................................................................................................................................................................TCTACGCA--AACTAGTCTCTC----AGTTTT...........................26200.051010000
...........................................................................................................................................................................................................................TCCG------------TTTCTACGCA--AACTAGTCTC.......................................24200.051100000
.............................................................................................................ACGCAGTGAAGGA-GACATCTCCGACCCC..............................................................................................................................................................28200.051010000
.....................................................................................................................................................................AGGATCACCTCCTGAGTCGATA.............................................................................................................22200.051010000
...............................................................................................................................................................................................CATGTCCGTCTGTCCGTCTGTCCGT................................................................................25200.051010000
..........................................................................................................................................................................................................GTCCGTCTGTCCGTCTGTCCG------------TT...........................................................23200.051100000
............................................................................................................................................................................................................................................................................TAAAGCTATCGAGTT--GAAACT.....21200.051010000
.............................................................................................................................CATCTCCGACCCCATAAAGT.......................................................................................................................................................20200.051010000
..........................................................................................................GCAACGCAGTGAAGGA-GACA.........................................................................................................................................................................20200.051000010
.................................................................................................................................................................................................................................................................................CTATCGAGTT--GAAACTTTGCA21200.051000010
..............................................................................................................CGCAGTGAAGGA-GACATCTCCGACCC...............................................................................................................................................................26200.051000001
......................................................GC-------------AGAGGGTATTATAATTTTGGTC.............................................................................................................................................................................................................24200.051001000
...............................................................................................................................................................TTGATCAGGATCACCTCC.......................................................................................................................18200.051100000
........................................................................................................................................................................................................................................................ACTAGTCTCTC----AGTTTTAAAGCTATC..................26200.051010000
droBip1
T-------TTCAATTA-GAT----CC----AC--CATTTTTATATCCGGTACTCCT-------AGAGTACAAGGGTATATTGTAGTCGTATGT-------ATGTATGTAACATCGAGAAGGA-ATC------------ATAAATTTTAT----ATATTCTTGATCAGCATCAACAGCCTAGTCGATATAGCCATGTCCGTCTGTCCGTCCGTCCGTCTGTCTG------------TATGAACGCG--TGGA----TCTCAGAGACTATAAGAGATAGAGCTAT--AGGATTTGGCASizeHit CountTotal NormTotal
No Reads
droKik1
AAAAT-GT--------AATG----AA----AC--TCTTTTTATACCCTT--------------------GCAGGGTATTATAATTTCAGTCAG-------AAGTTTGCAACGCAGTGAAGGA-GACGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGCATCAACAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCCGTCCGTCTGTCCG--------TTTCTACGCA--AACT----AGTCCCTCAGTTTTTAAGCTATCTGAAT--GAAACTTTGCASizeHit CountTotal NormTotal
No Reads
droFic1
AGAT----T------TGATG----CTGTTTAG--CCTTTTTATACCCT-----TGC-------AGGGCAAAAGGGTATTATAATTTCAGTCAG-------AAGTTTGCAACGCAGTGAAGGA-GACACCTCAGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCACGAGCAGAATCGAAATATGTATGTACGTCTGTCCGTCTGTCCGTCTGTCCGTCTGTCCG----TTTCCGCGCA--AACT----AGTCTCTCACTTTTAAAGCTATCGTGCT--GAAACTTT---SizeHit CountTotal NormTotal
No Reads
droEle1
A------TT------CCAAA----AC----AA--AGTATTTATACAAGTTACTCGC-------AGAGTAAAAGGGTAT--TGTATTCGATGAA-------AATTGTGTAAAAAGTAGAAGGA-AGTGTTTCCGAACCTATAAAGTATAT----ATATTCTTGATCAGGATCAA---CCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGCCTGTCCATCTG--------TATGAACGTC--GAGA----TCTCGGAAATTATTAAAGCAAGAGATTT--GAGACTTGGCASizeHit CountTotal NormTotal
No Reads
droRho1
AGTAT-ATT------GCAATCA---A----TT--CATATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATATTGTATTCGTGCAA-------AAGTATGTAACAGCTAGAAGGA-AGCGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCCGTCTGTCTGTCCG--------TATGAACGCT--GAGA----TCTCGGAAACTATAAAAGCTAGAAGATT--GGCATTTTGCASizeHit CountTotal NormTotal
No Reads
droBia1
AAAAT-GT--------CA------------TA--CATTTTTATACCCGTTAGTCGT-------AGAATAAAAGGGTATACTACATTCGTCGGA-------AAGTATGTAACAGGTAAAATGAAAGCGTTTCCGATTCCAAAAAGTATAT----ATATCCTTGATCAGGATCACTAGCCGAATCGATCTTGCCATGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTCCGTCCG-----CTGAACGTT--GAGA----TCTTGGAAACTATAAGAGCTAGAACAGT--CGAACTTGGCASizeHit CountTotal NormTotal
No Reads
droTak1
GAACA-GTT------C-AAG-----------G--CGTTTTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGATTCGTGCAA-------AAGTATGTAACAGCTAGAAGGA-AGCGTTTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCTGTCCGTCTG--------TATGAACGCT--GAGA----TCTCAGAAACTACAAAAGCTAGAAGATT--GAGATTTCCCASizeHit CountTotal NormTotal
No Reads
droEug1
AGAGA-ATT------TA--G----CA----AC--AGTTTTTATACCCGTTACTCGT-------AAAGTAAAAGGGTATACTAGATTCGTTGAA-------AAGTATGTAACAGATAGAAGAA-AGCGTTTGCGACCCTATAAAGTATAT----ATATTCTTGATCAGGATAAATAGCGAAGTTGATTGAGCCATGTCCGTCTATCCGTCCGTCCGTCCGTCCGTCCG--------TATGAACGCT--GAGA----TCTCAGGAACTATAACAGATACAAAATT--GAGATTAACCASizeHit CountTotal NormTotal
No Reads
dm3
TC---------------AAA----TT----GC--TATATTTATACCCGTTACTCGT-------ATAGTA-AAGGGTATAGTAGATTCGTTGAA-------AAATATGTAACAGGCAGAGGGA-AGAGTTTCCGATTATGTAAAGTATAC----ATATTCTTGATAAGGGTCAATAGCCGAGACGATCTAGCCATGTCCGTCTGTCCGCCCGTCCGACAGTACG------------TATGAACGTGTCGAGA----TCTCAGA-ACTATAAAAGCTAGAAGGTT--GAGATTAAGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--GAG........242016.15323000000000000000000000000000001000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000003302200660000000000000000000000000000000000000000000000000000000000000000000000000300000000000000300000000000000000000000000000000000000000000000000000000000000019300000000000000000000000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--GAGAT......26207.45149000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025000000000000000000000000000000000000000000000000000000030000000000280006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001500000012
...........................................................................................................................................................................................................................................................................TAAAAGCTAGAAGGTT--GAGATTAAGC.26204.30860000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001000002923000000191210000000000000002966000000
.....................................................................................TCGTTGAA-------AAATATGTAACAGGCAGA..................................................................................................................................................................................2623.5070000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--GA.........23203.2064000000000000000000000000000000000000000001000010000000000002400000000000000000000001003040001000000000000000100000000000000000000000000000000000000000060005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000007000000000000000000000000
.........................................................................................................................................................................................................................................................................TATAAAAGCTAGAAGGTT--GAGATTAAGC.28182.50450000000000000000000000100000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000300100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001528000000201000000000000004463000000
.............................................................................................................................................................................................................................................TGAACGTGTCGAGA----TCTCAGA-AC...............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGAACGTGTCGAGA----TCTCAGA-ACTA.............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TATGAACGTGTCGAGA----TCTCAGA-AC...............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCAGA-ACTATAAAAGCTAGAAGGT..............2432.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002020000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATTCTTGATAAGGGTCAATAGC.......................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGGGTCAATAGCCGAGACGATCTAG..........................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000
........................................................................................................................................................................................................................CAGTACG------------TATGAACGTGTCGAGA----TC.......................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TAGCCGAGACGATCTAGCCATGTC...................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--GAGA.......25201.7535000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000100020000000000000000000000000000011000000020000000000000000000000000000000000000000000000000000000000000000100000001000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCCGCC.......................................................................................2431.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
...........................................................................................................................................................................................................................................................................TAAAAGCTAGAAGGTT--GAGATTAAG..25201.65330000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101031000000000000000000000001000000000000002000000000000000010000000100000000000000000000000000000000000000000000000000000000000000100000000000000013000000051000000000000003060000010
...............................................................................................................................................................................................................................................................TCTCAGA-ACTATAAAAGCTAGAAGGT..............2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCCATGTCCGTCTGTCCGC........................................................................................2141.5060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000200000000000000000000000000
.........................................................................................................................................................................................................................................................................TATAAAAGCTAGAAGGTT--GAGATTAAG..27201.40280000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000612000000502000000000000001200000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGG...............19201.152300000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
................................................................................................................................................................................................................................................ACGTGTCGAGA----TCTCAGA-ACT..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................ATAGCCGAGACGATCTAGCCATGTCCG.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................TGTCCGTCTGTCCGCCCGTC...................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TAAGGGTCAATAGCCGAGACG................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GTAAAGTATAC----ATATTCTTGATAAGGGT..............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................ATAGTAGATTCGTTGAA-------AAAT................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTTACTCGT-------ATAGTA-AAGGGT............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TAGCCGAGACGATCTAGCCATGTCC..................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCGTTGAA-------AAATATGTAACAGGCAGAGG................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GAGGGA-AGAGTTTCCGATTATGTAAAG........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................TCGTTGAA-------AAATATGTAACAGGCAGAGGG...............................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCCGCCC......................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TAC----ATATTCTTGATAAGGGTCAATA.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AGACGATCTAGCCATGTCCGT................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................TCGTTGAA-------AAATATGTAACAGGCAGAG.................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................T-------ATAGTA-AAGGGTATAGTAGATT..................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................GCCGAGACGATCTAGCCATGT....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................C----ATATTCTTGATAAGGGTCAATAGCC......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AAATATGTAACAGGCAGAGGGA-AGAG.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAAAAGCTAGAAGGTT--GAGATTAAGC.27190.89170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104000000500000000000000000111000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--...........21200.751500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000100000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCCGC........................................................................................2340.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000
.......................................................................................................TATGTAACAGGCAGAGGGA-AG...........................................................................................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000
.................................................................................................................................................................................................................................................................TCAGA-ACTATAAAAGCTAGAAGG...............2330.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TTGAA-------AAATATGTAACAGGCAG...................................................................................................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................ACTATAAAAGCTAGAAGGTT--GAGAT......25200.65130000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000004000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--G..........22200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050002000000000000000000500000000000000000000000000000000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGT............................................................................................19200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000020000000
................................................................................................................................................................................................................................................................CTCAGA-ACTATAAAAGCTAGAAGGT..............2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CTCAGA-ACTATAAAAGCTAGAAGGTT--GA.........2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TCTCAGA-ACTATAAAAGCTAGAAGGTT--...........2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TTCGTTGAA-------AAATATGTAACAGGC.....................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAAGGTT--GAGATTAAGCG1820.5010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................A-ACTATAAAAGCTAGAAGGTT--GAGATT.....27200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000020000000000400000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000
.................................................................................AGATTCGTTGAA-------AAATATGTAA..........................................................................................................................................................................................2270.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................GAA-------AAATATGTAACAGGCAGA..................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTC...........................................................................................20200.3570000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAAAAGCTAGAAGGTT--GAGAT......22200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
..................................................................................................................................................................................................................................................................CAGA-ACTATAAAAGCTAGAAG................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................TTGAA-------AAATATGTAACAGGCAGA..................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGCCATGTCCGTCTGTCCGCC.......................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CAGA-ACTATAAAAGCTAGAAGGT..............2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCCATGTCCGTCTGTCCGCC.......................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................CAGA-ACTATAAAAGCTAGAAGG...............2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................CAGA-ACTATAAAAGCTAGAAGGTT--...........2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AAAAGCTAGAAGGTT--GAGATTAAGC.25200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000100000000000000000010000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCC..........................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................TAGATTCGTTGAA-------AAATATGT............................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGA-ACTATAAAAGCTAGAAGGTT--GAG........2670.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CGATCTAGCCATGTCCGTCTG.............................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000400000
......................................................................................CGTTGAA-------AAATATGTAACAGG......................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCAGA-ACTATAAAAGCTAGAAGGTA--TC.........2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TAGATTCGTTGAA-------AAATATGTA...........................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....................................................................................TTCGTTGAA-------AAATATGTAACAGGCAT...................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TATAAAAGCTAGAAGGTT--GAG........21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGA-ACTATAAAAGCTAGAAGGTT--GAGA.......2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCCATGTCCGTCTGTCCGCCA......................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................ATCTAGCCATGTCCGTCTGTC...........................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000
....................................................................................TTCGTTGAA-------AAATATGTAACAGGCATC..................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TAAAAGCTAGAAGGTT--GAGATTAA...24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000
............................................................................................................................................................................................................................................................................AAAAGCTAGAAGGTT--GAGATTAAG..24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................GATTCGTTGAA-------AAATATGTA...........................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGA-ACTATAAAAGCTAGAAGG...............2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................TCTAGCCATGTCCGTCTGTCCG.........................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................GA-ACTATAAAAGCTAGAAGGT..............21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATAAAAGCTAGAAGGTT--GAGATTAAG..26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AAAGCTAGAAGGTT--GAGATTAAG..23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TATAAAAGCTAGAAGGTT--GAGATT.....24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................CGATCTAGCCATGTCCGTCTGTC...........................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AAAAGCTAGAAGGTT--GAGATT.....21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TAAAAGCTAGAAGGTT--GAGAT......21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGCCATGTCCGTCTGTCCG.........................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AAGCTAGAAGGTT--GAGATTA....20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...................................ATATTTATACCCGTTACTCGT-------.........................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TAGATTCGTTGAA-------AAATATGTT...........................................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................TATGTAACAGGCAGAGGT...............................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TTGAA-------AAATATGTAACAGGCAA...................................................................................................................................................................................22180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAAAA-CTT------TAAGTCAGAT-----CGCATTTTGTTATACCCATTAGTCGT-------AGAGTAAAAGGGTATACTAGATTCGTTGAA-------AAGTATGTAACAGGCAGAAGAA-AGCGTTACCCACCATATTACGTATAT----ATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTAGCCATGTC-ATCTGTCCGTCCGGCC------------G--------TATGAACGTC--GAGA----TCTCAGGAACTA--GAAGCTAGAGAGTT--GATATTAAGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................TATGTAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................251745.597750001100319091116431320000
.......................................................................................................TATGTAACAGGCAGAAGAA-AGCGT........................................................................................................................................................................241813.062350002390312816153101000
..................................................................................................................................................................................................................................................................CAGGAACTA--GAAGCTAGAGAGTT--G..........2415.00500000010300010000
.........................................................................................................................................................................................................TGTCCGTCCGGCC------------G--------TATGAACGTC--GA...............................................2615.00500400000001000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTAGA..................2614.00400200010100000000
.....................................TGTTATACCCATTAGTCGT-------AGAGTAAA.................................................................................................................................................................................................................................2713.00300000020100000000
.........................................................................................................................................................................................................................................................GA----TCTCAGGAACTA--GAAGCTAGAGAGT..............2713.00300000000003000000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAGGAACTA--GA.........................2643.001200400020600000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCT.....................2313.00300000030000000000
.......................................................................................................TATGTAACAGGCAGAAGAA-.............................................................................................................................................................................19202.7054000054000000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-.............................................................................................................................................................................24202.50500000004717114052000
...................................................................TAAAAGGGTATACTAGATTCGTTGAA-------A...................................................................................................................................................................................................27202.1042000000042000000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTA....................2412.00200100010000000000
..................................................................................................................................................................................................................................................................CAGGAACTA--GAAGCTAGAGAGTT--GA.........2512.00200000000000020000
...................................................................TAAAAGGGTATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................29201.95390000002019000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-A............................................................................................................................................................................25171.9433000100225217040000
.......................................................................................................TATGTAACAGGCAGAAGA...............................................................................................................................................................................18201.7034000028000006000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGC.....................................................................................................................................................................................24201.6032000000000001031000
........................................................................GGGTATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................24201.5030000000030000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGA..................................................................................................................................................................................20201.4529000000000128000000
.......................................................................................................TATGTAACAGGCAGAAGAA-A............................................................................................................................................................................20201.3026000002200004000000
......................................................................................................GTATGTAACAGGCAGAAGA...............................................................................................................................................................................19201.2024000002300001000000
.............................................................................................................ACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................19201.1523000000000023000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGA...............................................................................................................................................................................23201.1022000000642010000000
.......................................................................................................TATGTAACAGGCAGAAGAA-AG...........................................................................................................................................................................21201.0521000002100000000000
.AAAA-CTT------TAAGTCAGAT-----CGCATT....................................................................................................................................................................................................................................................................2311.00100000000100000000
.......................................................................................................................................................................................................TCTGTCCGTCCGGCC------------G--------TATGAACGTC--.................................................2611.00100100000000000000
...................................................................................................................................................................................................................................................................AGGAACTA--GAAGCTAGAGAG...............2011.00100000010000000000
..................................................................................................................................................................................................................................................................CAGGAACTA--GAAGCTAGAGAGTT--GAT........2611.00100000010000000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTAGT..................2611.00100000010000000000
..................................................................................................................................................................................................................................................................CAGGAACTA--GAAGCTAGAGAGTT--GATA.......2711.00100000010000000000
...........................................................................................................................................................................................TAGCCATGTC-ATCTGTCCGTCCGGC...................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................GA----TCTCAGGAACTA--GAAGCTAGAGA................2511.00100000000001000000
..AAA-CTT------TAAGTCAGAT-----CGCATTTTGT................................................................................................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................CGAGTCGATCTAGCCATGTC-ATCTG.............................................................................................2511.00100000000001000000
.........................................................................................................................................TATTACGTATAT----ATATTCTTGATCAGGAT..............................................................................................................................2911.00100010000000000000
.......................................................................................................................................................................................................TCTGTCCGTCCGGCC------------G--------TATGAACGTC--GA...............................................2811.00100000000001000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTAGAC.................2711.00100000010000000000
.........................................................................................................................................................................................TCTAGCCATGTC-ATCTGTCCGTCCGGC...................................................................................2711.00100100000000000000
............................................................................................................................................TACGTATAT----ATATTCTTGATCAGGA...............................................................................................................................2511.00100010000000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AG...........................................................................................................................................................................26171.0017000000002014010000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTAGAG.................2711.00100000010000000000
.........................................................................................................................................................................................................................................................GA----TCTCAGGAACTA--GAAGCTAGAT.................2411.00100000000001000000
...........................................................................................................................................................................................TAGCCATGTC-ATCTGTCCGTCCGG....................................................................................2411.00100000010000000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTAG...................2511.00100000000100000000
..................................................................................................................................................................................................................................................................CAGGAACTA--GAAGCTAGAGAGTT--...........2311.00100000010000000000
.......................................................................................................TATGTAACAGGCAGAAGAA-AGCGTTA......................................................................................................................................................................2611.00100000000001000000
.......................................................T-------AGAGTAAAAGGGTATACTAGATT..................................................................................................................................................................................................................24201.0020000000000020000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTA--GAAGCTAGAGA................2811.00100000010000000000
..................................TTTTGTTATACCCATTAGTCGT-------AGA......................................................................................................................................................................................................................................2511.00100000000100000000
.........................................................................................................................................................................................................TGTCCGTCCGGCC------------G--------TATG.........................................................1811.00100000000001000000
.............................................................................................................................................................................................GCCATGTC-ATCTGTCCGTCCGGCC------------G--------TA...........................................................2711.00100000010000000000
.......................................................................................................................................................................................................TCTGTCCGTCCGGCC------------G--------TATGAACGT....................................................2511.00100000000100000000
...............................................................................................................AGGCAGAAGAA-AGCGTT.......................................................................................................................................................................17200.9018000000000018000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCAGA..................................................................................................................................................................................27200.851700290000002004000
..................................................................................................................................................TAT----ATATTCTTGATCAGGATCAGTAGC.......................................................................................................................2780.75600000010401000000
...............................................................................................................AGGCAGAAGAA-AGCGT........................................................................................................................................................................16200.7014000000000014000000
.......................................................................................................TATGTAACAGGCAGAAGAA-AGCG.........................................................................................................................................................................23190.6813000000102010000000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCAGT..........................................................................................................................2790.67600200040000000000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGCA....................................................................................................................................................................................24200.6513000000020000110000
............................................................................................................................................................TTCTTGATCAGGATCAGTAGCCGAGT..................................................................................................................2650.60300000010200000000
...................................................................TAAAAGGGTATACTAGATTCGTTGA............................................................................................................................................................................................................25200.551100000009020000000
.................................................................AGTAAAAGGGTATACTAGATTCGTTGAA-------....................................................................................................................................................................................................28200.501000000090000010000
..........................................................................................................................................................................CAGTAGCCGAGTCGATCTAGCCAT......................................................................................................2420.50100100000000000000
...................................................................................................................................................................TCAGGATCAGTAGCCGAGTCGATCTA...........................................................................................................2620.50100000000100000000
...................................................................................................................................................................................................................GCC------------G--------TATGAACGTC--GAGA----TCTCAGG..................................2520.50100000010000000000
......................................................................................................GTATGTAACAGGCAGAAGAA-AGCGT........................................................................................................................................................................25160.50800000000008000000
....................................................TCGT-------AGAGTAAAAGGGTATACTAG.....................................................................................................................................................................................................................24200.5010000000000010000000
....................................................................................................................................................T----ATATTCTTGATCAGGATCAGTAGC.......................................................................................................................2580.50400000040000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................30110.45500000041000000000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCA............................................................................................................................25200.45900000000610020000
.....................................................................AAAGGGTATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................27200.45900000072000000000
.............................................................................................................................................................................TAGCCGAGTCGATCTAGCCATGTC-..................................................................................................24200.45900000033030000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCAG...................................................................................................................................................................................26200.45900010005001002000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCAGAA.................................................................................................................................................................................28200.45900010010600010000
.............................................................................................................ACAGGCAGAAGAA-AGCGT........................................................................................................................................................................18200.40800000000008000000
...............................................................................................................................................................................GCCGAGTCGATCTAGCCATGTC-..................................................................................................22200.40800000006002000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCA....................................................................................................................................................................................25200.40800000080000000000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGCAGA..................................................................................................................................................................................26200.40800000000070001000
.................................................................................................................GCAGAAGAA-AGCGTT.......................................................................................................................................................................15200.40800000000008000000
.............................................................................................................................................................TCTTGATCAGGATCAGTAGCCGAGT..................................................................................................................2550.40200000010100000000
........................................................................................................ATGTAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................24180.39700010000006000000
................................................................................................................GGCAGAAGAA-AGCGT........................................................................................................................................................................15200.35700000000007000000
.................................................TAGTCGT-------AGAGTAAAAGGGTATACTAG.....................................................................................................................................................................................................................2760.33200000000200000000
............................................................................................................................................................................................................................................ATGAACGTC--GAGA----TCTCAGGAACTA--GA.........................2730.33100000010000000000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCAGTA.........................................................................................................................2890.33300000020100000000
.................................................................AGTAAAAGGGTATACTAGATTCGTTGAA-------A...................................................................................................................................................................................................29200.30600000042000000000
......................................................................AAGGGTATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................26200.30600000000006000000
.......................................................................................GTTGAA-------AAGTATGTAACAGGCAGA..................................................................................................................................................................................24200.30600000003300000000
....................................................................................................................................................................................................................CC------------G--------TATGAACGTC--GAGA----TCTCAGGA.................................25200.30600000005001000000
......................................................................................................GTATGTAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................26150.27400000000004000000
................................................................................................................................................................TGATCAGGATCAGTAGCCGAGTCGATC.............................................................................................................2740.25100000000000010000
...........................................................................................................TAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................21200.25500000000005000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AGCG.........................................................................................................................................................................28130.23300000000000030000
.........................................................................................................TGTAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................23200.20400000001102000000
....................................................TCGT-------AGAGTAAAAGGGTATACTAGA....................................................................................................................................................................................................................25200.20400000000020020000
....................................................................................................................................................................CAGGATCAGTAGCCGAGTCGAT..............................................................................................................2250.20100000010000000000
....................................................................................................................................................................CAGGATCAGTAGCCGAGTCGATCT............................................................................................................2450.20100000010000000000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATC.............................................................................................................................24200.20400010030000000000
....................................................................AAAAGGGTATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................28200.20400000004000000000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAGGAACTA--G..........................2550.20100000001000000000
...........................................................................................................................................................ATTCTTGATCAGGATCAGTAGCCGAGT..................................................................................................................2750.20100100000000000000
..............................................................................................................................................................CTTGATCAGGATCAGTAGCCGAGT..................................................................................................................2450.20100000000100000000
............................................................................................................................................................................................................................................ATGAACGTC--GAGA----TCTCAGGAACT..............................24200.20400000004000000000
............................................................................................................AACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................20200.20400000000004000000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGCAG...................................................................................................................................................................................25200.20400000000000040000
.............................................................................................................................................................................TAGCCGAGTCGATCTAGCCATG.....................................................................................................22200.20400300000001000000
..........................................................................................................................................................TATTCTTGATCAGGATCAGTAGCCGAG...................................................................................................................2750.20100000000010000000
..................................................................................................................................................................................................................................G--------TATGAACGTC--GAGA----TCTCAGGA.................................23200.20403000000000010000
.......................................................T-------AGAGTAAAAGGGTATACT.......................................................................................................................................................................................................................19200.20400000000004000000
....................................................TCGT-------AGAGTAAAAGGGTATACTAGATT..................................................................................................................................................................................................................27200.20400000000004000000
................................................TTAGTCGT-------AGAGTAAAAGGGTATACTAGA....................................................................................................................................................................................................................2960.17100000001000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AGCGT........................................................................................................................................................................29120.17200000001001000000
................................................TTAGTCGT-------AGAGTAAAAGGGTATACTA......................................................................................................................................................................................................................2760.17100000010000000000
......................................................................................................GTATGTAACAGGCAGA..................................................................................................................................................................................16200.15300000000003000000
.....................................................................AAAGGGTATACTAGATTCGTTGAA-------A...................................................................................................................................................................................................25200.15300000001002000000
.................................................................................................................................................ATAT----ATATTCTTGATCAGGATC.............................................................................................................................22200.15300010001001000000
......................................................................................CGTTGAA-------AAGTATGTAACAGGCAGA..................................................................................................................................................................................25200.15300000000300000000
....................................................................AAAAGGGTATACTAGATTCGTTGAA-------A...................................................................................................................................................................................................26200.15300000000003000000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGC.....................................................................................................................................................................................23200.15300000000030000000
............................................................................ATACTAGATTCGTTGAA-------AAGT................................................................................................................................................................................................21200.15300300000000000000
.................................................................................................................................................ATAT----ATATTCTTGATCAGGATCA............................................................................................................................23200.15300000000002001000
..........................................................................................................GTAACAGGCAGAAGAA-AGCGTT.......................................................................................................................................................................22200.15300000000003000000
......................................................................AAGGGTATACTAGATTCGTTGAA-------AAGT................................................................................................................................................................................................27200.15300000000003000000
.................................................................................................................................................................................CGAGTCGATCTAGCCATGTC-..................................................................................................20200.15300000000003000000
................................................TTAGTCGT-------AGAGTAAAAGGGTATA.........................................................................................................................................................................................................................2480.13100000010000000000
........................................................................................TTGAA-------AAGTATGTAACAGGCAGAAGA...............................................................................................................................................................................26170.12200000000200000000
.........................................................................................TGAA-------AAGTATGTAACAGGCAGAAGAA-.............................................................................................................................................................................26170.12200000000011000000
..............................................................................................................................................................CTTGATCAGGATCAGTA.........................................................................................................................1790.11100000000001000000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCAGTAG........................................................................................................................2990.11100000000100000000
.................................................................................................................................................ATAT----ATATTCTTGATCAGGATCAGTAG........................................................................................................................2790.11100000000000010000
....................................................................................................................................................................................................................CC------------G--------TATGAACGTC--GAGA----TCTCAGG..................................24200.10200000010010000000
.................................................................................................................................................................................CGAGTCGATCTAGCCATG.....................................................................................................18200.10200200000000000000
..............................................................................ACTAGATTCGTTGAA-------AAGTAT..............................................................................................................................................................................................21200.10200000000200000000
....................................................................................................................................................................................GTCGATCTAGCCATGTC-A.................................................................................................18100.10100000001000000000
......................................................................AAGGGTATACTAGATTCGT...............................................................................................................................................................................................................19200.10200000000002000000
...................................................................TAAAAGGGTATACTAGATTCGTTG.............................................................................................................................................................................................................24200.10200000000000020000
..................................................................................................................................................................................................................................G--------TATGAACGTC--GAGA----TCT......................................18200.10200000020000000000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAGGAACTA--...........................24200.10200010000100000000
......................................................................................................GTATGTAACAGGCAGAAGAA-AG...........................................................................................................................................................................22200.10200000000002000000
...........................................................................TATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................21200.10200000000002000000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACT..............................16200.10200000002000000000
................................................................GAGTAAAAGGGTATACTAG.....................................................................................................................................................................................................................19200.10200000000002000000
.......................................................T-------AGAGTAAAAGGGTATACTAGATTCG................................................................................................................................................................................................................26200.10200000000002000000
.............................................................................................................................................................................TAGCCGAGTCGATCTAGCCATGT....................................................................................................23200.10200000011000000000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGAT..............................................................................................................................23200.10200000000000020000
...................................................GTCGT-------AGAGTAAAAGGGTATA.........................................................................................................................................................................................................................21100.10100000000100000000
.................................................................................................................................................................................CGAGTCGATCTAGCCATGT....................................................................................................19200.10200000000002000000
.............................................................................................................ACAGGCAGAAGAA-AGCG.........................................................................................................................................................................17200.10200000000002000000
..........................................................................................................GTAACAGGCAGAAGA...............................................................................................................................................................................15200.10200000000002000000
...........................................................................................................TAACAGGCAGAAGAA-A............................................................................................................................................................................16200.10200000000002000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCAGAAGA...............................................................................................................................................................................30110.09100000001000000000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGCAGAAGA...............................................................................................................................................................................29120.08100000010000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AGC..........................................................................................................................................................................27140.07100010000000000000
.............................................................................................................................................................................................................................................................................GAAGCTAGAGAGTT--G..........15150.07100000000001000000
............................................................................................A-------AAGTATGTAACAGGCAGAAGAA-AGCG.........................................................................................................................................................................27150.07100000000001000000
......................................................................................................GTATGTAACAGGCAGAAGAA-AGCG.........................................................................................................................................................................24170.06100000000001000000
......................................................................................................GTATGTAACAGGCAGAAGAA-AGCGTC.......................................................................................................................................................................26170.06100000000001000000
.........................................................................................TGAA-------AAGTATGTAACAGGCAGAAGA...............................................................................................................................................................................25170.06100000000100000000
.......................................................................................................TATGTAACAGGCAGAAGAA-AGCGTTG......................................................................................................................................................................26170.06100000000100000000
............................................................................................A-------AAGTATGTAACAGGCAGAAGAA-AG...........................................................................................................................................................................25190.05100000000001000000
.......................................................................................................TATGTAACAGGCAGAAGAA-AGCGTC.......................................................................................................................................................................25190.05100000000010000000
..................................................................................................................................................................................................................................G--------TATGAACGTC--GAGA----TCTCAC...................................21200.05110000000000000000
........................................................................................................ATGTAACAGGCAGAAGAA-AG...........................................................................................................................................................................20200.05100000000001000000
....................................................................................................................................................................................................................CC------------G--------TATGAACGTC--GAGA----TCTCA....................................22200.05101000000000000000
..................................................................................................................................................................................................................................................GTC--GAGA----TCTCAGGAACTA--...........................19200.05100000001000000000
.......................................................................AGGGTATACTAGATTCGTTGA............................................................................................................................................................................................................21200.05100000000001000000
...........................................................................................................................................................................................................................................TATGAACGTC--GAGA----TCTCAGGAACT..............................25200.05100100000000000000
...................................................................TAAAAGGGTATACTAGATTCGTTGAA-------AA..................................................................................................................................................................................................28200.05100000000001000000
..............................................................................................................................................................................AGCCGAGTCGATCTAGCCATG.....................................................................................................21200.05101000000000000000
........................................................................................................ATGTAACAGGCAGAAGAA-A............................................................................................................................................................................19200.05100000000001000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAG................................................................................................................................................................................22200.05100010000000000000
............................................................................................................................................................................................................................................ATGAACGTC--GAGA----TCTCAGGAACTA--...........................25200.05100000000100000000
......................................................GT-------AGAGTAAAAGGGTATACTA......................................................................................................................................................................................................................21200.05100000000001000000
............................................................................................................................................................................................................................................ATGAACGTC--GAGA----TCTCAGGA.................................21200.05100000000000001000
......................................................................AAGGGTATACTAGATTCGTTGAA-------A...................................................................................................................................................................................................24200.05100000000001000000
..........................................................................................................GTAACAGGCAGAAGAA-AGCGT........................................................................................................................................................................21200.05100000000001000000
................................................................GAGTAAAAGGGTATACTAGATTCGTT..............................................................................................................................................................................................................26200.05100000010000000000
...................................................................TAAAAGGGTATACTAGATTCGTTGAA-------AAGTA...............................................................................................................................................................................................31200.05100000010000000000
.......................................................T-------AGAGTAAAAGGGTATACTAGATTCGT...............................................................................................................................................................................................................27200.05100000010000000000
................................................................................................................................................................................CCGAGTCGATCTAGCCATGT....................................................................................................20200.05100000000001000000
............................................................................................A-------AAGTATGTAACAGGCAGAAGA...............................................................................................................................................................................22200.05100000010000000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCAGAC.................................................................................................................................................................................28200.05100000001000000000
..............................................................................................................................................................CTTGATCAGGATCAGTAGCCGAGTTA................................................................................................................26200.05100000010000000000
..........................................................................................................GTAACAGGCAGAAGAA-.............................................................................................................................................................................16200.05100000000001000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AA...........................................................................................................................................................................26200.05100000000000010000
.......................................................T-------AGAGTAAAAGGGTA...........................................................................................................................................................................................................................15200.05100000000100000000
.....................................................................AAAGGGTATACTAGATTCGTTGAA-------AAGTA...............................................................................................................................................................................................29200.05100000010000000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAG.......................................................................................................................................................................................22200.05100000000001000000
...............................................................................................................................................................................GCCGAGTCGATCTAGCCATG.....................................................................................................20200.05100000000001000000
..............................................................................................................................................................................AGCCGAGTCGATCTAGCCATGT....................................................................................................22200.05100000000001000000
.......................................................................................................................................................................................................................................................GAGA----TCTCAGGAACT..............................15200.05100000000001000000
.............................................................................TACTAGATTCGTTGAA-------AAGTATG.............................................................................................................................................................................................23200.05100000010000000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAG-.............................................................................................................................................................................24200.05100000000001000000
..................................................................................................................................................................................................................................G--------TATGAACGTC--GAGA----.........................................15200.05100000000100000000
....................................................................................................................................................................................GTCGATCTAGCCATGT....................................................................................................16200.05100000000001000000
.............................................................................................................ACAGGCAGAAGAA-AG...........................................................................................................................................................................15200.05100000000001000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-CA...........................................................................................................................................................................26200.05100000000000010000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAGGAACT..............................23200.05100000001000000000
..................................................................................................................................................TAT----ATATTCTTGATCAGGAT..............................................................................................................................20200.05100000001000000000
...........................................................................................................................................................................................................................................TATGAACGTC--GAGA----TCTCAGGAA................................23200.05100000000001000000
........................................................................................................ATGTAACAGGCAGAAGAA-AGCG.........................................................................................................................................................................22200.05100000000001000000
....................................................TCGT-------AGAGTAAAAGGGTATACTAGATA..................................................................................................................................................................................................................27200.05100010000000000000
...............................................................................................................................................................................GCCGAGTCGATCTAGCCA.......................................................................................................18200.05100000010000000000
.................................................................................AGATTCGTTGAA-------AAGTATGTAACAGGC.....................................................................................................................................................................................27200.05100000000000010000
.....................................................CGT-------AGAGTAAAAGGGTATACTAGATT..................................................................................................................................................................................................................26200.05100000010000000000
..................................................................GTAAAAGGGTATACTAGATTCGTTGA............................................................................................................................................................................................................26200.05100000000000001000
.............................................................................................................................................................................TAGCCGAGTCGATCTAGCCAT......................................................................................................21200.05100000000001000000
..................................................................................................................................................................................GAGTCGATCTAGCCATGT....................................................................................................18200.05100000000001000000
....................................................................AAAAGGGTATACTAGATTCGTTGAA-------AA..................................................................................................................................................................................................27200.05100000000010000000
.....................................................CGT-------AGAGTAAAAGGGTATACTAGA....................................................................................................................................................................................................................24200.05100000000001000000
.......................................................................................GTTGAA-------AAGTATGTAACAGGCAGAAG................................................................................................................................................................................26200.05100000000010000000
...........................................................................................AA-------AAGTATGTAACAGGCAGAAGAA-AGA..........................................................................................................................................................................27200.05100000000100000000
.....................................................................AAAGGGTATACTAGATTCGTT..............................................................................................................................................................................................................21200.05100000000001000000
................................................................................................................................................................................CCGAGTCGATCTAGCCAT......................................................................................................18200.05100000000001000000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGG......................................................................................................................................................................................22200.05100000010000000000
.............................................................................................................................................................................TAGCCGAGTCGATCTAGCC........................................................................................................19200.05100000000001000000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCAGAAG................................................................................................................................................................................29200.05100000000100000000
...................................................................................................................................................................................AGTCGATCTAGCCATGT....................................................................................................17200.05100000000001000000
...................................................................................................................................................AT----ATATTCTTGATCAGGATC.............................................................................................................................20200.05101000000000000000
.....................................................................................................................................................................................TCGATCTAGCCATGT....................................................................................................15200.05100000000001000000
droSec2
GAAAA-CTT------TAAGTCAGAT-----CTCATTTTGTTATACCCATTAGTCGT-------AGAGTAAAAGGGTATACTAGATTCGTTGAA-------AAGTATGTAACAGGCAGAAGAA-AGCGTTACCCACCATATTACGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTC-ATCTGTCCGTCCGGCC------------G--------TATGAACGTC--GAGA----TCTCAGGAACTATAGAAGCTAGAGAGTT--GATATTAAGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................TTCGTTGAA-------AAGTATGTAACAGG......................................................................................................................................................................................23201.402828000
....................................................................................TTCGTTGAA-------AAGTATGTAACAGGCA....................................................................................................................................................................................25200.751515000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATC.............................................................................................................................24200.701414000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCA............................................................................................................................25200.551110001
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGAT..............................................................................................................................23200.3577000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCAA...........................................................................................................................26200.3066000
............................................................................................................................................................TTCTTGATCAGGATCAATAGCCGAGT..................................................................................................................26200.2044000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTATAGAAGCT.....................2550.2011000
....................................................................................................................................................................................................................................................C--GAGA----TCTCAGGAACTATAGAAGC......................2450.2010001
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGC.....................................................................................................................................................................................23200.1533000
.............................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGT..................................................................................................................25200.1533000
...............................................................................................................................................GTATAT----ATATTCTTGATCAGGATCAAT..........................................................................................................................27200.1022000
..................................................................................................................................................TAT----ATATTCTTGATCAGGATCAATAGC.......................................................................................................................27200.1022000
.....................................................................................TCGTTGAA-------AAGTATGTAACAGGCA....................................................................................................................................................................................24200.1022000
..............................................................................ACTAGATTCGTTGAA-------AAGTAT..............................................................................................................................................................................................21200.1020200
..........................................................................................................GTAACAGGCAGAAGAA-AGCG.........................................................................................................................................................................20180.0610001
.....................................................CGT-------AGAGTAAAAGGGTATACTAGATTCG................................................................................................................................................................................................................28200.0510100
..........................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGAGT..................................................................................................................28200.0511000
......................................................................................CGTTGAA-------AAGTATGTAACAGG......................................................................................................................................................................................21200.0511000
...............................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGA...............................................................................................................26200.0511000
.................................................................................................................................................ATAT----ATATTCTTGATCAGGATC.............................................................................................................................22200.0510010
...........................................................................TATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................21200.0510001
.............................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTC.................................................................................................................26200.0511000
......................................................................................CGTTGAA-------AAGTATGTAACAGGCAGA..................................................................................................................................................................................25200.0511000
.....................................................................AAAGGGTATACTAGATTCGT...............................................................................................................................................................................................................20200.0510100
...................................................................TAAAAGGGTATACTAGATTCGTTGAA-------....................................................................................................................................................................................................26200.0511000
............................................................................................................................................................TTCTTGATCAGGATCAATAGCC......................................................................................................................22200.0511000
.................................................................AGTAAAAGGGTATACTAGATTCGTT..............................................................................................................................................................................................................25200.0511000
...................................................................................................................................................................TCAGGATCAATAGCCGAGTCG................................................................................................................21200.0510100
................................................................................................................................................TATAT----ATATTCTTGATCAGGATCAATA.........................................................................................................................27200.0511000
....................................................................................................................................................T----ATATTCTTGATCAGGATCAATAGCCGAG...................................................................................................................29200.0510100
....................................................................AAAAGGGTATACTAGATTCGTTGA............................................................................................................................................................................................................24200.0511000
...............................................................AGAGTAAAAGGGTATACTAGATTCGT...............................................................................................................................................................................................................26200.0510100
..................................................................................................................................................................ATCAGGATCAATAGCCGAGTCGAT..............................................................................................................24200.0511000
....................................................................................................................................................................CAGGATCAATAGCCGAGTCGAT..............................................................................................................22200.0510001
.......................................................................AGGGTATACTAGATTCGTTGAA-------AAGTA...............................................................................................................................................................................................27200.0511000
.........................................................................................................................................................................TCAATAGCCGAGTCGATCTG...........................................................................................................20200.0511000
...............................................................AGAGTAAAAGGGTATACTAGA....................................................................................................................................................................................................................21200.0511000
.............................................................................TACTAGATTCGTTGAA-------AAGT................................................................................................................................................................................................20200.0510001
............................................................................ATACTAGATTCGTTGAA-------AAG.................................................................................................................................................................................................20200.0510100
..................................................................................................................................................................ATCAGGATCAATAGCCGAGTCGA...............................................................................................................23200.0510100
droYak3
AAATA-ATT------TCAAG----CA----G----ACATATATACCCGTTACTCGT-------AGAGTAAAGGGGTATACTAGATTTGTTGAA-------AAGTATGTAACAGGCAGAAGGA-AGCGTTTCCGACCATATAAAGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTCCGTCTGTCCGTCCGTCTGTCTGTCCG------------TATGAACGTC--GAGA----TCTCAAGAACTACAAAATCTAGAAAGTT--CAGATTAAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................TTCTTGATCAGGATCAATAGCCGAG...................................................................................................................25201.5030003000000000
...................................................................................................................................................................................................................................................TC--GAGA----TCTCAAGAACTACAAAATCC.....................2611.00100100000000
....................................................................................................................................................................................................................CTGTCTGTCCG------------TATGAACGTC--GAGA----TC.......................................27200.9519000000000019
.................................................................................................................................................................GATCAGGATCAATAGCCGAGTCGAT..............................................................................................................25200.9018000000000018
.............................................................................................................ACAGGCAGAAGGA-AGCGTTTCCGACC................................................................................................................................................................26200.5511001100000000
........................................................................................................................................................................................................................................................................CTACAAAATCTAGAAAGTT--CAGAT......2420.50100000010000
.....................................................................................................................................................................................TCGATTTGGCCATGTCCGTCTGTCCG.........................................................................................26200.45909000000000
..........................................................................................................................................................................................TTGGCCATGTCCGTCTGTCCGTCCGT....................................................................................26200.45909000000000
.........................................................................................TGAA-------AAGTATGTAACAGGCAGAAGGA-A............................................................................................................................................................................27200.25500500000000
................................................................................................................................................................TGATCAGGATCAATAGCCGAGTCGATT.............................................................................................................27200.20400000000004
....................................................TCGT-------AGAGTAAAGGGGTATACTAGA....................................................................................................................................................................................................................25200.15303000000000
...........................................................................................................................................................................................................TCCGTCCGTCTGTCTGTCCG------------TATGAACG.....................................................28200.15303000000000
...................................................................................................................................................................................................TCCGTCTGTCCGTCCGTCTGTC...............................................................................22200.15300030000000
.........................................................................................TGAA-------AAGTATGTAACAGGCAGAAGGA-AGCG.........................................................................................................................................................................30200.15300000000003
.................................................................................................................................................ATAT----ATATTCTTGATCAGGATCAAT..........................................................................................................................25200.15303000000000
....................................................TCGT-------AGAGTAAAGGGGTATACTAGAT...................................................................................................................................................................................................................26200.10201000000001
............................................................................ATACTAGATTTGTTGAA-------AAGT................................................................................................................................................................................................21200.10200000020000
...........................................................................................................................AGCGTTTCCGACCATATAAAGTATAT----A..............................................................................................................................................27200.10200200000000
...........................................................................................................................................................................................................................................TATGAACGTC--GAGA----TCTCAAGAAC...............................24200.10201100000000
..............................................................................................................................................................................................................................................GAACGTC--GAGA----TCTCAAGAACTACAAAA........................28190.05100100000000
....................................................................................................AAGTATGTAACAGGCAGAAGGA-AGC..........................................................................................................................................................................25200.05101000000000
........................................................................GGGTATACTAGATTTGTTGAA-------AAGTA...............................................................................................................................................................................................26200.05100010000000
..........................................TACCCGTTACTCGT-------AGAGT....................................................................................................................................................................................................................................19200.05100100000000
...................................................................................................................................................AT----ATATTCTTGATCAGGA...............................................................................................................................18200.05101000000000
...........................................................................................................................................................................................................................................TATGAACGTC--GAGA----TCTCAAGAACTAC............................27200.05100100000000
.............................................................................................................................................................................TAGCCGAGTCGATTTGGCCATGTCCGT................................................................................................27200.05101000000000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAAGAACTACAAA.........................28200.05101000000000
............................................................................................................................................................................................................CCGTCCGTCTGTCTGTCCG------------TATGA........................................................24200.05100010000000
..........................................................................GTATACTAGATTTGTTGAA-------AAGT................................................................................................................................................................................................23200.05101000000000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAAGAAC...............................22200.05100100000000
.............................................................................TACTAGATTTGTTGAA-------AAGTATGTAAC.........................................................................................................................................................................................27200.05100100000000
.............................................................................................................ACAGGCAGAAGGA-AGCGTTTCCGA..................................................................................................................................................................24200.05100000010000
...........................................................................TATACTAGATTTGTTGAA-------AAGT................................................................................................................................................................................................22200.05100000010000
................................................................................TAGATTTGTTGAA-------AAGTATGTAACAGGC.....................................................................................................................................................................................28200.05100100000000
.................................................................................................................................................................................................................CGTCTGTCTGTCCG------------TATGAACGTC--GAG..............................................27200.05100100000000
.............................................................................................................................................................................TAGCCGAGTCGATTTGGCCATG.....................................................................................................22200.05100100000000
.........................................................................................................................................................................TCAATAGCCGAGTCGATTTG...........................................................................................................20200.05101000000000
................................................................................................................................TTCCGACCATATAAAGTATAT----AT.............................................................................................................................................23200.05100010000000
...........................................................................................................................................................................................................................TCCG------------TATGAACGTC--GAGA----TCTCAAGAAC...............................28200.05101000000000
.................................................................................................................GCAGAAGGA-AGCGTTTCC....................................................................................................................................................................18200.05100010000000
...............................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGATT.............................................................................................................28200.05100100000000
......................................................GT-------AGAGTAAAGGGGTATACTA......................................................................................................................................................................................................................21200.05101000000000
.............................................................................................................................................................................................................................................TGAACGTC--GAGA----TCTCAAGAACTACC...........................26200.05100100000000
droEre2
TC---------------AAG-TGGC-----TG--CATTTTTATACCCGCTACTCCT-------AGAGTAAAAGGGCATGCTAGATTCGTTGAA-------AAGTATGTAACAGGCAGAAGGA-AGCGTTTCCGACCATGTAAAGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTCGAACTGGCCATGTTTGTCTGTCCGTCCGTCCGCCTGTCCG------------TATGAACGGACATGGA----TCTCAGGAACTACAAAAGTTAGAATGTT--GAGATTAAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................TTGATCAGGATCAATAGCCG.....................................................................................................................20200.1020000002
.................................................................................................................GCAGAAGGA-AGCGTTTCCGACCAT..............................................................................................................................................................24200.0510001000

Generated: 05/18/2015 at 01:17 AM