ID:

dps_1676

 Coordinate:

4_group4:3573836-3573986 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dpse_GLEANR_9416:1]; CDS [Dpse\GA29011-cds]; intron [Dpse\GA29011-in]; Antisense to intron [Dpse\GA10518-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAATTATCGTTCAGAGCTTTTCGTCGCCACCGCTGCACAGCAGAGAGAGAGAGCAAAACAACAAAAACATGTTTAAAAGCACCAACAAAAATAAGAAAACCAGCCCCCCATTTTATTGCGTGTATTGTGGTTGTTTTTGTGAGAATTTAAAAATAGACAGCCTGATTTGATGTCCATGTATTCGTTGTCCGTGGGAGTTC
**************************************************................((((((..((......(((....)))...))..))))))......(((((((((......((.(((((((.((((....................)))).))).)))).)).....)))))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM343916
embryo
 M059
embryo
 M062
head
.........ATCCTCATGTGCCGTCAAG............................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0
......................GTCAAGGATTCCTACAGTCGC................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
...................GCCGTCAAGGATTCCTACAGTCGC................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
............................GATTCCTACAGTCGCGTCCAAGAGAA..................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
............................GATTTCTACAGTCGCGTCCAAGAGA...................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 1 0
..............CATGTGCCGTCAAGGATTCCTAC...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
......ATCATCCTCATGTGCCGTCAAGGATTCC......................................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 1 0
..............CATGTGCCGTCAAGGATTCCT........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
........CATCCTCATGTGCCGTCAAG............................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
......AGCATCCTCATGTGCCGTC.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0
.........ATCCTCATGTGCCGTCAAGG.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
............................GATTCCTACAGTCGCGTCCAA.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.........ATCCTCATGTGCCGTCCAG............................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0
............CTCATGTGCCGTCAAGGATT........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.AGCGCAGCATCCTCATGTGC...................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.............................ATTCCTACAGTCGCGTCCAAGAGA...................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
............................GATTCCTACAGTCGCGTCCAAGAG....................................................................................................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0
......AGCATCCTCATGTGCCGTCAAGG.............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
...................GCCGTCAAGGATTCCTACAGTC.................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
.................GTGCCGTCAAGGATTCCTACAGTC.................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
......................GTCAAGGATTCCTACAGTCGCGTC............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..................................TGCAGTCGCGTCCAAGGTAA..................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................TATTGTGGTTGTTTTTGTGT.......................................................... 20 1 2 0.50 1 0 1 0 0 0
...............................................................................................................................................................................................................ACAGCCAGATTTGATGACC......................... 19 2 4 0.25 1 0 0 1 0 0
.............................AATCCAACAGTCGCGTCAAA.......................................................................................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0
.............................................................................................................................................................................................................TGACAGCCAGATTTGATGAC.......................... 20 3 10 0.10 1 0 0 0 0 1
..............................................................................................................................AAAGCTCCAACAAAAACAAGAT....................................................................................................... 22 3 12 0.08 1 1 0 0 0 0
......................................................TTATCGTACAGAGCGTATC.................................................................................................................................................................................. 19 3 18 0.06 1 1 0 0 0 0
..............................TTCCCACAGTCGCGCCAAA.......................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTCGCGTCGTAGGAGTACACGGCAGTTCCTAAGGATGTCAGCGCAGGTTCCATTAATAGCAAGTCTCGAAAAGCAGCGGTGGCGACGTGTCGTCTCTCTCTCTCGTTTTGTTGTTTTTGTACAAATTTTCGTGGTTGTTTTTATTCTTTTGGTCGGGGGGTAAAATAACGCACATAACACCAACAAAAACACTCTTAAATTTTTATCTGTCGGACTAAACTACAGGTACATAAGCAACAGGCACCCTCAAG
**************************************************................((((((..((......(((....)))...))..))))))......(((((((((......((.(((((((.((((....................)))).))).)))).)).....)))))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 GSM444067
head
 SRR902011
testis
.................................................................................................................................................................................................................TCGGACTAAACTACAGGTACA..................... 21 0 1 1.00 1 1 0 0 0
............................................................................................................................ATTTTCGTGGTGGTTATTATGC......................................................................................................... 22 3 1 1.00 1 0 1 0 0
.....GTCGTAGGAGTACACGGCAGTTC............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
......................................................................................GTGTCGTCTCTCTCTCTCGT................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
...........................................................................................................................................TTTGTTCTTTTGGTGGGCGGG........................................................................................... 21 3 10 0.10 1 0 0 1 0
...............................................................................................................................................................................................CCCTTAAAATTTTAGCTGTC........................................ 20 3 11 0.09 1 0 0 0 1
...............................................................................................................................................GTCTTTTGGTCGAGAGGTAA........................................................................................ 20 3 12 0.08 1 0 1 0 0
.........................................................................................................................................................................GTACATGACGCCAACAAAA............................................................... 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group4:3573786-3574036 + dps_1676 CAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAAT-TATCG--T-TCA--------------------------------------------------------------------------------------------------------GA-GCTTTTCGTCGCCACCGCTGCACAGCAGAGAGAGAGAGCAAAACAA----------------------------------------------------C----A--AAAACATGTTTAAAAGCACCAACAA-------------A-AAT--------AAG--AA-------------------------------------------AACCAG-----CCCCCCATT-------------------T----TATT----GCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATTTGATGTCCATGTATTCGTTG------------------TCCGTGG--------GAGTTC
droPer2 scaffold_10:2602826-2603076 + dpe_626 CAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAAT-TATCG--T-TCA--------------------------------------------------------------------------------------------------------GA-GCTTTTCGTCGCCACCGCTGCACAGCAGAGAGAGAGAGCAAAACAA----------------------------------------------------C----A--AAAACATGTTTAAAAGCACCAACAA-------------A-AAT--------AAG--AA-------------------------------------------AACCAG-----CCCCCCATT-------------------T----TATT----GCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATTTGATGTCCATGTATTCGTTG------------------TCCGTGG--------GAGTTC
droWil2 scf2_1100000004516:682958-683225 - dwi_1141 AACCA------CGCCTTTTGTCGTCAAGGATTCTTACAGTCGTGTCCAAGGTGAG-CAAAT----ACA--AAACC---GAAA---C--------CACAAAAATACAGTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACACGCAGCCATCACACACTTACACACA-ACT--------TAA--AA-------TCTGTGTGAACGTGCATGTTTGTATGTATGTGT--GCACCAG-----CCCCCA------CACTCC---GCGTAGTT----TGTT------TTTTGTTGT--TTTTGTTTTTGCAAGAATTTAAAAATAGCCCCAGGCTGATTTGCTGGT-------------TA-GTGTTGTTG---TTTTTCGCAT--------GAG---
droVir3 scaffold_12723:4619912-4619992 - TTAAT------ACCCGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT----GTGTTTTTGCAAGAATTTAAAAATAGCC--GCAA-TACTTATTGAA-------------AA-TTCTCTT--------TCTGTGT--------ATGTAC
droMoj3 scaffold_6500:10589459-10589528 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT----GCCCGCATTGTG-TGTTGTTTTTGCAAGAATTTAAAAATAGCC--ACAATGTTCTTTCTGT-------------GCATGGT------------------------------AC
droGri2 scaffold_15126:3572754-3572810 - AAGCAGCGCCAGTCCGTATTCAACTAAGGATTCATACAGCAGAGTGCAAGGTAAT-TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:8726785-8727096 + dan_609 CACCT------CGCCCTATGCGGTCAAGGACTGCTATAGCCGCGTCCAAGGTAAC-TATCA-------------------------------------------CCGGAAG---A----GACTC--CATCGGAGCTCCACTCCAGTC------G------TGTCATAGCCTCCA-GCTTTCAG--------------------------------------TCA--------------GTCA--GTCGC-----CATAATGCACTATTGGGTTA----A--AAAACATGTTTTG---------------------------------------------CATTCAGTATGTG----------TGTGTG--TGTGTGAGTGTGCCCCCA-----CCACCACCTCCCCACCCC---ACCACAGTTGTGAATT----GCGTGTATTAT--TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA-----------------TGT--------TTTTTTGCATACATATATAAATAC
droBip1 scf7180000396535:1267720-1268009 + CACAT------CGCCTTATGCGGTCAAGGACTGCTACAGCCGTGTCCAAGGTAAT-TATCT------------------------------------------CCCGAAAA---AA---GACTC---------------CTCCAGTCGCATCCACTTGAGTGGCATAGCCGACA-GCTTTTAG--------------------------------------TCA--------------GTCA--CTCGC-----CATAATGCATT---GGCTTTTAAGAAAAAAACATGTTTGG---------------------------------------------CAT----TATGG----------------G--TGTGTGAGT--GAACCCC---------CCCT-----GCTCCACCACCCCAGTTGTGAATT----GCGTGTATTGT--TGTTGTTTTTGAAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA-------------T--------------TTTTTTGCATGC------ATACAT
droKik1 scf7180000302382:931508-931817 - CACAT------CCCCGTATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAT-TGAC-------------------------------------------GGGGCCCC---AA---A------AAGTAGCGATTAGCG------ATAGTCAC-------TCGGAGCAGGCA-GCTTGCAG--------------------------------------TCA--------------GGGA--CTCGCAGTCG-TAAGTGCA---------GC----A--AAAACATGCTTTCGAGTAGAA----------------------AATAC--ATA-----CATACACTATGTGCA---ATACATATTCACACGTACGATG--GCACCCG-----CCCCCCTTTCGGAGCTCC---GCTCACTTTGTGAATT----GCGTGCGTTGTT-TGTTGTTTTTGCGAAAATTTATAAATAGCC--AGCCCGATTTTTCGTC-----------------TGTGAATA------------------------CG-
droFic1 scf7180000454082:584634-584889 - CACGT---CCTCTCCACACGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAACTTTTG--T-TCG--GAATCGGGGAAGCCTC--------CCCAAAAAGGGAGATAACTTAT---------A-CATAGCT---------------A---------------TATCAGTTA-GCTTTCAG--------------------------------------TCGCA--------------GT----CC-------CCAATGCACT---GAGCAAAA--AAAAAAA-------------------------------CAGAA---GAGAT--AAAC----------------------------------------------------AGCATGTT---------------------GGTGTTGGTGGACT----GCGTGTGTTGCT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CA-------------------------------------
droEle1 scf7180000491028:1868764-1869016 - CACAT------CCCCTCATGCGGTCAAAGATTGCTACAGTCGAGTGCAAGGTAAT-TTTTT--T-------------TG----GTCAGACCATCTCC-ATAA-GGCGGTAATCCAA---------ACCATAGTTAAA-----------------------------AGCG-TTAAACTTTGAA--------------------------------------TCGTA--------------TA---CGCG-----C-AAATGCACT---GGGGAA----AA--A---------------------------------AACAA---GAGAT--AAAGAAAA-----------------------------------------------AAGCACGTTCCTCAGT--------------TGTATTTGTGAATT----GCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCTTGGT-------------C--------------------------------------
droRho1 scf7180000780252:578-805 + CACAT------CCCCTCATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAT-TTTTG--T-GGATAGCATC-------------------TGT-----------AAA---TG---G---------------------------AGA---------------TAGCGGTTA-AACTACTG--------------------------------------TCGCA--------------TA---CCCT-----C-AAATGCACT---GGGGAA----AA--A---------------------------------A-CAA---GAGAT--AAAG--AA-----------------------------------------------AAGCACGTTCCGTAGT--------------TGTATTTGTGAATT----GCGTGTGGTGTT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATTTCTTGGC-------------C--------------------------------------
droBia1 scf7180000302408:995103-995314 - CAGTT------CCCCCCATGCGGTCAAGGATTGCTACAGCCGAGTGCAAGGTAAT-TTG--------------------------------------------GGCGATAAC---C---T---------------------------GCA------------------------------GGG--------------------------------------TCGCA--------------TA--GCACC-----CAAAATGCACT---GCGCGGAA--AA--C---------------------------------G--TA---GAGAT-AAAAC--CA-----------------------------------------------GGGCACGTTCCGCGCC--------------TGTATTTGTGAATT----GCGTGTGTTGTT-CGTTGTTTTTGCAAGCACTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CCCATG---------------------------------
droTak1 scf7180000415115:403650-403888 + CAATT------CCCCGCATGCTGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAA-AATAT---------------GGG----GTC--------CCTAAAAA-GGCGATAAC---C---T---------------------------ATA---------------GACCACTGA-GCTTTTCG--------------------------------------TCA--------------TCCT--GTGGG-----TAGAATGCACT---GGGGAA----AA--A---------------------------------A--TA---GAGAT-AAAAC--CA-----------------------------------------------GAGCACGTTCCTTGGT--------------GGTATTTGTGAATT----GCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCTTGGT-------------CGCAT----------------------------------
droEug1 scf7180000409752:1078915-1079168 - CACAA---CCTCTCAGCATGCGGTCAAGGATTGTTACAGTCGAGTGCAAGGTAAT-TTACTTTTCCTTTAGTATTTGGG-------------------ATGA-GGCGACAAC---CTCCT----ACTGACTGCT-------------ATA---------------TAGCACATA-GCTTTCAG--------------------------------------TCG--------------TTTA--TCAGA-----T-AAATGCACT---GGGGAA----AA--A---------------------------------G--AA---GACA--AAAAC--CA-----------------------------------------------GAGCACGTTTCTCAGA--------------TGTATTTGTGAGTT----GCGTGTGTTGTT-TGTGTTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCTTA------------------------------------------------------
dm3 chr2L:20084413-20084621 - CACTT------CCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGAAAA---AA---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCGCT-----CAGAATGCACT---GGCAAA----AA--A---------------------------------GGGGC---GAGATTGAAAG--CA------------------------------------------------GACGCGTTTCTCACT--------------TGTTTTTGTGTATT----GCGTGTGTTGTTTTGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATTTCTTAGC-------------CCCATGTGC------------------------------
droSim2 2l:19576268-19576474 - dsi_23906 CACCT------CCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTT--------------------------------------------GGCGAAAA---AC---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCACT-----CAGAATGCACT---GGCAAA----AA--G---------------------------------GGGGC---GAGATTAAAA---CC-----------------------------------------------GGGCGCGTTTCTCACT--------------TGTTTTCGTGTATT----GCGTGTGTTGTT-TGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CCCATGTGC------------------------------
droSec2 scaffold_7:3696977-3697187 - CACCT------CCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGAAAA---AC---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCACT-----CAGAATGCACT---GGCAAA----AA--G---------------------------------GGGGC---GAGTTTAAAAC---C-----------------------------------------------AGGCGCGTTTCTCACT--------------TGTTTTCGTGTATT----GCGTGTGTTGTT-TTTTGTTTTTGCAACCATTTATAAATACCC--AGCCTGATTTCTTGGC-------------CCCATGTGCATA---------------------------
droYak3 2R:6556253-6556486 - CACCT------CCTCACATGCGGTCAAGGACTGTTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGACAA---GC---A---------------------------AGA----------------------------------------------------------------------------TAGCTCCGTACACATATCGCGCA-----CAGAATGCACT---GTCAAA----AA--A---------------------------------GGAGC---GAGAT--AAG---CA-----------------------------------------------AGGCGCGTTTCCAACT--------------TGTATTCAAGTATTGCGTGCGTGTGTTGTT-TGTTGTTTTTGCAACAATTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CC-ATGTGCATTAGT------GTG---------------
droEre2 scaffold_4845:4245714-4245945 + CAACT------CCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGACAA---AC---A---------------------------ATA----------------------------------------------------------------------------TAGCTTCGTACACAAA--GCGCG-----CAAAATGCACT---GTCAAA----AA--A-G-------------------------------GGGGA---GAGAT--AAAC---A-----------------------------------------------AGGCGCGTTCC-CAAT--------------TGTATTCGCGTATT----GCGTGTGTTGTT-TGTTGTTTTTGTAACCATCTATAAATAGCC--AGCCAGATTTCTTGCC-------------C-CATGTGAATAAGT-G-CCTGTG---------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAAT-TATCG--T-TCA--------------------------------------------------------------------------------------------------------GA-GCTTTTCGTCGCCACCGCTGCACAGCAGAGAGAGAGAGCAAAACAA----------------------------------------------------C----A--AAAACATGTTTAAAAGCACCAACAA-------------A-AAT--------AAG--AA-------------------------------------------AACCAG-----CCCCCCATT-------------------T----TATT----GCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATTTGATGTCCATGTATTCGTTG------------------TCCGTGG--------GAGTTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........ATCCTCATGTGCCGTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
......................GTCAAGGATTCCTACAGTCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................GCCGTCAAGGATTCCTACAGTCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............CATGTGCCGTCAAGGATTCCTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............CATGTGCCGTCAAGGATTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
........CATCCTCATGTGCCGTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......AGCATCCTCATGTGCCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.........ATCCTCATGTGCCGTCAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................GATTCCTACAGTCGCGTCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............CTCATGTGCCGTCAAGGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.AGCGCAGCATCCTCATGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................GATTCCTACAGTCGCGTCCAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
......AGCATCCTCATGTGCCGTCAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................GCCGTCAAGGATTCCTACAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................GTGCCGTCAAGGATTCCTACAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................GTCAAGGATTCCTACAGTCGCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGT--GGTTGTTTTTGTGT......................................................................................2020.5010000001000
droPer2
CAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAAT-TATCG--T-TCA--------------------------------------------------------------------------------------------------------GA-GCTTTTCGTCGCCACCGCTGCACAGCAGAGAGAGAGAGCAAAACAA----------------------------------------------------C----A--AAAACATGTTTAAAAGCACCAACAA-------------A-AAT--------AAG--AA-------------------------------------------AACCAG-----CCCCCCATT-------------------T----TATT----GCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATTTGATGTCCATGTATTCGTTG------------------TCCGTGG--------GAGTTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................ATTCCTACAGTCGCGTCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
..............CATGTGCCGTCAAGGATTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATTTGATGTCCATGTATT............................................2111.001001000
......................GTCAAGGATTCCTACAGTCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droWil2
AACCA------CGCCTTTTGTCGTCAAGGATTCTTACAGTCGTGTCCAAGGTGAG-CAAAT----ACA--AAACC---GAAA---C--------CACAAAAATACAGTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACACGCAGCCATCACACACTTACACACA-ACT--------TAA--AA-------TCTGTGTGAACGTGCATGTTTGTATGTATGTGT--GCACCAG-----CCCCCA------CACTCC---GCGTAGTT----TGTT------TTTTGTTGT--TTTTGTTTTTGCAAGAATTTAAAAATAGCCCCAGGCTGATTTGCTGGT-------------TA-GTGTTGTTG---TTTTTCGCAT--------GAG---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................CGTCAAGGATTCTTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000
......................GTCAAGGATTCTTACAGTCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210100
................................CTTACAGTCGTGTCCAAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.50301200
.................TTGTCGTCAAGGATTCTTACAGTCGTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
.................................................................................................................................................................................................................................................................................................................................................AA-------TCTGTGTGAACGTGCA.........................................................................................................................................................................................1811.00100010
............................GATTCTTACAGTCGTGTCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
.............................ATTCTTACAGTCGTGTCCAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...................GTCGTCAAGGATTCTTACAGTCGTGTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.......................TCAAGGATTCTTACAGTCGTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................GTCAAGGATTCTTACAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.............................ATTCTTACAGTCGTGTCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
AACCA------CGCCTTTTGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
........................CAAGGATTCTTACAGTCGTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.............................ATTCTTACAGTCGTGTCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............CTTTTGTCGTCAAGGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
droVir3
TTAAT------ACCCGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT----GTGTTTTTGCAAGAATTTAAAAATAGCC--GCAA-TACTTATTGAA-------------AA-TTCTCTT--------TCTGTGT--------ATGTACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATTTAAAAATAGCC--....................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAAGAATTTAAAAAT..........................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT----GCCCGCATTGTG-TGTTGTTTTTGCAAGAATTTAAAAATAGCC--ACAATGTTCTTTCTGT-------------GCATGGT------------------------------ACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAGCAGCGCCAGTCCGTATTCAACTAAGGATTCATACAGCAGAGTGCAAGGTAAT-TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........CCAGTCCGTATTCAACTAAGGATTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
......................ACTAAGGATTCATACAGCAGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
droAna3
CACCT------CGCCCTATGCGGTCAAGGACTGCTATAGCCGCGTCCAAGGTAAC-TATCA-------------------------------------------CCGGAAG---A----GACTC--CATCGGAGCTCCACTCCAGTC------G------TGTCATAGCCTCCA-GCTTTCAG--------------------------------------TCA--------------GTCA--GTCGC-----CATAATGCACTATTGGGTTA----A--AAAACATGTTTTG---------------------------------------------CATTCAGTATGTG----------TGTGTG--TGTGTGAGTGTGCCCCCA-----CCACCACCTCCCCACCCC---ACCACAGTTGTGAATT----GCGTGTATTAT--TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA-----------------TGT--------TTTTTTGCATACATATATAAATACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................GTTA----A--AAAACATGTTTTG---------------------------------------------CATTCAGT........................................................................................................................................................................................................2611.001000010
.....................GGTCAAGGACTGCTATAGCCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............GCCCTATGCGGTCAAGGACTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
........................CAAGGACTGCTATAGCCGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGTTGTGAATT----GCGT.............................................................................................................2011.001000010
...........................................................................................................................C--CATCGGAGCTCCACTCCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................GGTCAAGGACTGCTATAGCCGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................TG----------TGTGTG--TGTGTGAGTGT......................................................................................................................................................................19200.102000002
.........................................................................................................................................................................................................................................................................................................................................................GTATGTG----------TGTGTG--TGTGTGAG.........................................................................................................................................................................21160.061100000
............................................................................................................................................................................................................................................................................................................................................................TGTG----------TGTGTG--TGTGTGAGT........................................................................................................................................................................19200.051000001
.............................................................................................................................................................................................................................................................................................................................................................GTG----------TGTGTG--TGTGTGAGTGTG.....................................................................................................................................................................21200.051000001
..............................................................................................................................................................................................................................................................................................................................................................TG----------TGTGTG--TGTGTGAGTGTG.....................................................................................................................................................................20200.051100000
droBip1
CACAT------CGCCTTATGCGGTCAAGGACTGCTACAGCCGTGTCCAAGGTAAT-TATCT------------------------------------------CCCGAAAA---AA---GACTC---------------CTCCAGTCGCATCCACTTGAGTGGCATAGCCGACA-GCTTTTAG--------------------------------------TCA--------------GTCA--CTCGC-----CATAATGCATT---GGCTTTTAAGAAAAAAACATGTTTGG---------------------------------------------CAT----TATGG----------------G--TGTGTGAGT--GAACCCC---------CCCT-----GCTCCACCACCCCAGTTGTGAATT----GCGTGTATTGT--TGTTGTTTTTGAAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA-------------T--------------TTTTTTGCATGC------ATACATSizeHit CountTotal NormTotal
No Reads
droKik1
CACAT------CCCCGTATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAT-TGAC-------------------------------------------GGGGCCCC---AA---A------AAGTAGCGATTAGCG------ATAGTCAC-------TCGGAGCAGGCA-GCTTGCAG--------------------------------------TCA--------------GGGA--CTCGCAGTCG-TAAGTGCA---------GC----A--AAAACATGCTTTCGAGTAGAA----------------------AATAC--ATA-----CATACACTATGTGCA---ATACATATTCACACGTACGATG--GCACCCG-----CCCCCCTTTCGGAGCTCC---GCTCACTTTGTGAATT----GCGTGCGTTGTT-TGTTGTTTTTGCGAAAATTTATAAATAGCC--AGCCCGATTTTTCGTC-----------------TGTGAATA------------------------CG-SizeHit CountTotal NormTotal
No Reads
droFic1
CACGT---CCTCTCCACACGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAACTTTTG--T-TCG--GAATCGGGGAAGCCTC--------CCCAAAAAGGGAGATAACTTAT---------A-CATAGCT---------------A---------------TATCAGTTA-GCTTTCAG--------------------------------------TCGCA--------------GT----CC-------CCAATGCACT---GAGCAAAA--AAAAAAA-------------------------------CAGAA---GAGAT--AAAC----------------------------------------------------AGCATGTT---------------------GGTGTTGGTGGACT----GCGTGTGTTGCT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CACAT------CCCCTCATGCGGTCAAAGATTGCTACAGTCGAGTGCAAGGTAAT-TTTTT--T-------------TG----GTCAGACCATCTCC-ATAA-GGCGGTAATCCAA---------ACCATAGTTAAA-----------------------------AGCG-TTAAACTTTGAA--------------------------------------TCGTA--------------TA---CGCG-----C-AAATGCACT---GGGGAA----AA--A---------------------------------AACAA---GAGAT--AAAGAAAA-----------------------------------------------AAGCACGTTCCTCAGT--------------TGTATTTGTGAATT----GCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCTTGGT-------------C--------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CACAT------CCCCTCATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAT-TTTTG--T-GGATAGCATC-------------------TGT-----------AAA---TG---G---------------------------AGA---------------TAGCGGTTA-AACTACTG--------------------------------------TCGCA--------------TA---CCCT-----C-AAATGCACT---GGGGAA----AA--A---------------------------------A-CAA---GAGAT--AAAG--AA-----------------------------------------------AAGCACGTTCCGTAGT--------------TGTATTTGTGAATT----GCGTGTGGTGTT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATTTCTTGGC-------------C--------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAGTT------CCCCCCATGCGGTCAAGGATTGCTACAGCCGAGTGCAAGGTAAT-TTG--------------------------------------------GGCGATAAC---C---T---------------------------GCA------------------------------GGG--------------------------------------TCGCA--------------TA--GCACC-----CAAAATGCACT---GCGCGGAA--AA--C---------------------------------G--TA---GAGAT-AAAAC--CA-----------------------------------------------GGGCACGTTCCGCGCC--------------TGTATTTGTGAATT----GCGTGTGTTGTT-CGTTGTTTTTGCAAGCACTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CCCATG---------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CAATT------CCCCGCATGCTGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAA-AATAT---------------GGG----GTC--------CCTAAAAA-GGCGATAAC---C---T---------------------------ATA---------------GACCACTGA-GCTTTTCG--------------------------------------TCA--------------TCCT--GTGGG-----TAGAATGCACT---GGGGAA----AA--A---------------------------------A--TA---GAGAT-AAAAC--CA-----------------------------------------------GAGCACGTTCCTTGGT--------------GGTATTTGTGAATT----GCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCTTGGT-------------CGCAT----------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CACAA---CCTCTCAGCATGCGGTCAAGGATTGTTACAGTCGAGTGCAAGGTAAT-TTACTTTTCCTTTAGTATTTGGG-------------------ATGA-GGCGACAAC---CTCCT----ACTGACTGCT-------------ATA---------------TAGCACATA-GCTTTCAG--------------------------------------TCG--------------TTTA--TCAGA-----T-AAATGCACT---GGGGAA----AA--A---------------------------------G--AA---GACA--AAAAC--CA-----------------------------------------------GAGCACGTTTCTCAGA--------------TGTATTTGTGAGTT----GCGTGTGTTGTT-TGTGTTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCTTA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CACTT------CCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGAAAA---AA---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCGCT-----CAGAATGCACT---GGCAAA----AA--A---------------------------------GGGGC---GAGATTGAAAG--CA------------------------------------------------GACGCGTTTCTCACT--------------TGTTTTTGTGTATT----GCGTGTGTTGTTTTGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATTTCTTAGC-------------CCCATGTGC------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................GGTCAAGGACTGCTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000001000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GC---GAGATTGAAAG--CA------------------------------------------------GACGCG..........................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000100000000000000000000000000000000000
..............................CTGCTACAGTCGAGTGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGCTACAGTCGAGTGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................TCAAGGACTGCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCGCT-----CAGAATGCAC...........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
....................CGGTCAAGGACTGCTACAGTCGAGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................AAA---AA---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCGCT-----CAGA.................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GATTGAAAG--CA------------------------------------------------GACGCGTTTCT.....................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GAGATTGAAAG--CA------------------------------------------------GACGCGTT........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................CACGCGGTCAAGGACTGCTACAGTCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCTCACACGCGGTCAAGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGGACTGCTACAGTCGAGTGCAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AT-TTTT-------------------------------------------GGCGAAAA---AA---C---------------------------AGA----------------------------------------------------------------------------T--------------..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGAAAG--CA------------------------------------------------GACGCGTTT.......................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAATAGCC--AGCCTGATTTCTTAGC-------------.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTATT----GCGTGTGTTG.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATAGCC--AGCCTGATTTCT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATAAATAGCC--AGCCTG..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....T------CCTCACACGCGGTCAAGGACTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................A----AA--A---------------------------------GGGGC---GAGATTGAAAG--C.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCC--AGCCTGATTTCTTA......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGTCAAGGACTGCTACAGTCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATT----GCGTGTGTTGTTTTGTTG...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................CGCGGTCAAGGACTGCTACAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCACACGCGGTCAAGGACTGCTACAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TACAGTCGAGTGCAAGGTAAT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGTATT----GCGTGTGTTG.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACTT------CCTCACACGCGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GTCAAGGACTGCTACAGTCGAGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AG--CA------------------------------------------------GACGCGTTTCTCACT--------------T..................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................A----------------------------------------------------------------------------T--------------A--GCGCT-----CAGAATGCACT---GG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTCACACGCGGTCAAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCAAGGACTGCTACAGTCGAGTGCAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................T-------------------------------------------GGCGAAAA---AA---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCGC...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CACACGCGGTCAAGGACTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................A---------------------------------GGGGC---GAGATTGAAAG--CA------------------------------------------------GACGCG..........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTTTTGTTGTTTTTGCAAC.....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CGCGTTTCTCACT--------------TGTTTTT............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................AGA----------------------------------------------------------------------------T--------------A--GCGCT-----CAGAATGCA............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCACACGCGGTCAAGGACTGCTACAGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAA----AA--A---------------------------------GGGGC---GAGATTGA.......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCTACAGTCGAGTGCAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................A---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCGCT-----CAGAATGCC............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CACACGCGGTCAAGGACTATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CACCT------CCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTT--------------------------------------------GGCGAAAA---AC---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCACT-----CAGAATGCACT---GGCAAA----AA--G---------------------------------GGGGC---GAGATTAAAA---CC-----------------------------------------------GGGCGCGTTTCTCACT--------------TGTTTTCGTGTATT----GCGTGTGTTGTT-TGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CCCATGTGC------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............CGCACGCGGTCAAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00411200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-TGTTGTTTTTGCAACC....................................................................................1913.00300300000000000000
...............GCACGCGGTCAAGGACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00321000000000000000
......................GTCAAGGACTGCTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00303000000000000000
..............CGCACGCGGTCAAGGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201100000000000000
...............GCACGCGGTCAAGGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
........................CAAGGACTGCTACAGTCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.........................AAGGACTGCTACAGTCGAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..............CGCACGCGGTCAAGGACTGCTACAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.ACCT------CCTCGCACGCGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.....................GGTCAAGGACTGCTACAGTCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........................CAAGGACTGCTACAGTCGAGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
.......................................................................................................................................................................................................................................................................................................................................ATTAAAA---CC-----------------------------------------------GGGCGCGTT........................................................................................................................................................1811.00100001000000000000
............................GACTGCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
....T------CCTCGCACGCGGTCAAGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
................................GCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTT-TGTTGTTTTTGCAA......................................................................................2111.00100000001000000000
.............................ACTGCTACAGTCGAGTGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
......................GTCAAGGACTGCTACAGTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..............CGCACGCGGTCAAGGACTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.....................GGTCAAGGACTGCTACAGTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..............CGCACGCGGTCAAGGACTGCTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.....................GGTCAAGGACTGCTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.....................GGTCAAGGACTGCTACAGTCGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............CTCGCACGCGGTCAAGGACTGCTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
............CTCGCACGCGGTCAAGGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
droSec2
CACCT------CCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGAAAA---AC---C---------------------------AGA----------------------------------------------------------------------------T--------------A--GCACT-----CAGAATGCACT---GGCAAA----AA--G---------------------------------GGGGC---GAGTTTAAAAC---C-----------------------------------------------AGGCGCGTTTCTCACT--------------TGTTTTCGTGTATT----GCGTGTGTTGTT-TTTTGTTTTTGCAACCATTTATAAATACCC--AGCCTGATTTCTTGGC-------------CCCATGTGCATA---------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............GCACGCGGTCAAGGACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.....................GGTCAAGGACTGCTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................GAGTGCAAGGTAAT-TTTT-------------------------------------------GGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
................................GCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..............CGCACGCGGTCAAGGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
CACCT------CCTCGCACGCGGTCAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
....T------CCTCGCACGCGGTCAAGGACTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.....................GGTCAAGGACTGCTACAGTCGAGTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
..............CGCACGCGGTCAAGGACTGCTACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
droYak3
CACCT------CCTCACATGCGGTCAAGGACTGTTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGACAA---GC---A---------------------------AGA----------------------------------------------------------------------------TAGCTCCGTACACATATCGCGCA-----CAGAATGCACT---GTCAAA----AA--A---------------------------------GGAGC---GAGAT--AAG---CA-----------------------------------------------AGGCGCGTTTCCAACT--------------TGTATTCAAGTATTGCGTGCGTGTGTTGTT-TGTTGTTTTTGCAACAATTTATAAATAGCC--AGCCTGATTTCTTGGC-------------CC-ATGTGCATTAGT------GTG---------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCGTGCGTGTGTTGTT-T...................................................................................................2212.00202000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................T--------------TGTATTCAAGTATTGCGTGCGTGTGTT........................................................................................................2811.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCGTGCGTGTGTTG.......................................................................................................1911.00100000010000
...............................................................................................................................................................................................................................................................................AAA----AA--A---------------------------------GGAGC---GAGAT--AAG---CA-----------------------------------------------AGGCGC...........................................................................................................................................................2711.00100000010000
...................................ACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATAAATAGCC--AGCCTG..............................................................2111.00101000000000
....................................CAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..CCT------CCTCACATGCGGTCAAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTATTGCGTGCGTGTGTTGTT-TGTT................................................................................................2811.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCAAGTATTGCGTGCGTGTGTT........................................................................................................2611.00100000010000
.....................GGTCAAGGACTGTTACAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...........CCTCACATGCGGTCAAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTCAAGTATTGCGTGCGTGTGTTGT......................................................................................................2911.00100000010000
.....................GGTCAAGGACTGTTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
droEre2
CAACT------CCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAAT-TTTT-------------------------------------------GGCGACAA---AC---A---------------------------ATA----------------------------------------------------------------------------TAGCTTCGTACACAAA--GCGCG-----CAAAATGCACT---GTCAAA----AA--A-G-------------------------------GGGGA---GAGAT--AAAC---A-----------------------------------------------AGGCGCGTTCC-CAAT--------------TGTATTCGCGTATT----GCGTGTGTTGTT-TGTTGTTTTTGTAACCATCTATAAATAGCC--AGCCAGATTTCTTGCC-------------C-CATGTGAATAAGT-G-CCTGTG---------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................GGTCAAGGACTGCTACAGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................................GCTACAGTCGAGTGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..ACT------CCTCACACGCGGTCAAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100

Generated: 05/18/2015 at 01:12 AM