ID:

dps_1656

 Coordinate:

4_group4:1436143-1436293 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.4 -13.0 -13.0 -12.9

Flybase annnotation

CDS [Dpse\GA17475-cds]; exon [dpse_GLEANR_9165:2]; Antisense to exon [Dpse\tRNA:GA29669:1]; Antisense to tRNA [Dpse\tRNA:GA29669-RA]; intron [Dpse\GA17475-in]

No Repeatable elements found

mature
  1. 3:6819457-6819477 -
  2. dps_1286  3:17720542-17720562 +
  3. 3:17721731-17721751 -
  4. 4_group1:1122841-1122861 -
  5. 4_group1:1123483-1123503 -
  6. 4_group1:1123741-1123761 -
  7. 4_group1:4587088-4587108 -
  8. 4_group1:4587878-4587898 +
  9. 4_group1:4588890-4588910 +
  10. 4_group3:5422091-5422111 +
  11. 4_group3:8696950-8696970 +
  12. dps_1656  4_group4:1436229-1436249 -
star
  1. 3:6819496-6819516 -
  2. dps_1286  3:17720503-17720523 +
  3. 3:17721770-17721790 -
  4. 4_group1:1122880-1122900 -
  5. 4_group1:1123522-1123542 -
  6. 4_group1:1123780-1123800 -
  7. 4_group1:4587127-4587147 -
  8. 4_group1:4587839-4587859 +
  9. 4_group1:4588851-4588871 +
  10. 4_group3:3532384-3532404 -
  11. 4_group3:5422052-5422072 +
  12. 4_group3:8696911-8696931 +
  13. dps_1656  4_group4:1436268-1436288 -
  14. XL_group1a:4383224-4383244 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAAAATGAAACCAAAAACAGCAAAAAATCCAAAAAGCATGATGCATCGGCCGGGAATCGAACCCGGGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACCGATGCTTGTGTGGGCTTGAAGGCCAAATGTTAAGTTAGAAAAATGGCCAACGAAGCAGATAGCAAATGTATGTATTTTTTCCCATTTTTCCAGCTATGTACCTCCGCGACTCTGGGGCTTTAGTGGTCATGTGCAAACGGTTT
*******************************************************((.((....(((((((((.((...)).)))).)).................))).)).))**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 V112
male body		 GSM343916
embryo
 M062
head
 SRR902011
testis
 SRR902010
ovaries
..................................AAGCATGATGCATCGGCCGGG.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGCTTTAGTGGTCATGTGC......... 19 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................GCGGCTTTAGTGGTCATGTGC......... 21 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................CCGCGACTCTGGGGCTTTAGTGGTC............... 25 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................GGGCTTTAGTGGTCATGTGC......... 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................AACCACCGAGGCTGGTGT.................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0 0 0
...................................................................................................................................................................................................................CTGCGAATCTGGGGGTTTAG.................... 20 3 4 0.25 1 0 0 1 0 0 0 0
..............................................................................................ACCACTGAACCACCGATGCTT........................................................................................................................................ 21 0 12 0.17 2 1 0 0 0 0 1 0
......................................................................................AGCATTCTACCACTGAACCAC................................................................................................................................................ 21 0 14 0.14 2 2 0 0 0 0 0 0
.....................................................................................................................GTAGGCTTGAAGCACAAATG.................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0
..........................................................................GCGTGACAGGAGAGCGTTC.............................................................................................................................................................. 19 3 20 0.10 2 2 0 0 0 0 0 0
.............................................................................................TACCACTGAACCACCGATGCTT........................................................................................................................................ 22 0 12 0.08 1 1 0 0 0 0 0 0
.......................................................AATCGAACCCGGGCCGCCCGC............................................................................................................................................................................... 21 0 14 0.07 1 0 0 0 0 1 0 0
.......................................................AATCGAACCCGGGCCGCCCG................................................................................................................................................................................ 20 0 14 0.07 1 1 0 0 0 0 0 0
....................................................................................CGAGCATTCTACCACTGAACC.................................................................................................................................................. 21 0 14 0.07 1 1 0 0 0 0 0 0
.........................................................................................ATTCTACCACTGAACCACCGA............................................................................................................................................. 21 0 14 0.07 1 0 0 0 0 1 0 0
........................................................................................CATTCTACCACTGAACCACCGA............................................................................................................................................. 22 0 14 0.07 1 1 0 0 0 0 0 0
..........................................................................................TTCTACCACTGAACCACCGATG........................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0
............................................................................................CTACCACTGAACCACCGATGC.......................................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0
...........................................................................................TCTACCACTGAACCACCGATGC.......................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0
.....................................................GTAATCGAACCCGGGCCGCCCA................................................................................................................................................................................ 22 2 14 0.07 1 1 0 0 0 0 0 0
....................................................................CCGCCCGCGTGGCAGGCGAGC.................................................................................................................................................................. 21 0 14 0.07 1 1 0 0 0 0 0 0
.................................................................................GGGCGAGCATTCTACCACTG...................................................................................................................................................... 20 1 14 0.07 1 1 0 0 0 0 0 0
........................................................ATCGAACGCGGGCGGCCCGGGT............................................................................................................................................................................. 22 3 14 0.07 1 1 0 0 0 0 0 0
............................................................................GTGATAGGCGAGCGTTCTA............................................................................................................................................................ 19 3 16 0.06 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................GGAGCTTTAGTGGTTATCT........... 19 3 19 0.05 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................CTTTGAGGCTTTAGTGG................. 17 2 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

------------------------------------------#######################################################################------------------------------------------------------------------------------------------------------------------------------------------
TTTTTTACTTTGGTTTTTGTCGTTTTTTAGGTTTTTCGTACTACGTAGCCGGCCCTTAGCTTGGGCCCGGCGGGCGCACCGTCCGCTCGTAAGATGGTGACTTGGTGGCTACGAACACACCCGAACTTCCGGTTTACAATTCAATCTTTTTACCGGTTGCTTCGTCTATCGTTTACATACATAAAAAAGGGTAAAAAGGTCGATACATGGAGGCGCTGAGACCCCGAAATCACCAGTACACGTTTGCCAAA
****************************************************************************************************************************************((.((....(((((((((.((...)).)))).)).................))).)).))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M059
embryo
 M040
female body
 V112
male body		 M062
head
 GSM444067
head
 SRR902012
CNS imaginal disc
 SRR902011
testis
 M022
male body		 SRR902010
ovaries
 GSM343916
embryo
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 0 14 36025.21 504353 437742 53289 1099 11220 5 74 97 820 0 7
.......................................................................................CGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 0 14 17081.50 239141 150984 55040 2416 17360 92 9444 3092 455 154 104
.......................................ACCACGTAGCCGGCCCTTTGCT.............................................................................................................................................................................................. 22 2 2 14880.00 29760 959 16987 7081 2285 866 175 1056 11 294 46
.......................................ACCACGTAGCCGGCCCTTAGCT.............................................................................................................................................................................................. 22 1 2 11325.00 22650 334 11011 9230 1159 708 7 26 5 8 162
.......................................................................................CGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 24 0 14 4116.79 57635 32743 9178 5100 6388 107 1498 327 1886 342 66
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 26 0 14 3829.07 53607 42686 7832 961 1434 39 167 61 370 5 52
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCTACG.......................................................................................................................................... 28 1 14 3241.86 45386 43469 880 52 950 0 4 5 26 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTAGG.......................................................................................................................................... 28 1 14 2282.14 31950 31295 2 0 653 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTT................................................................................................................................................................................................. 19 2 2 1559.00 3118 23 1717 954 198 182 9 20 1 13 1
.......................................ACCACGTAGCCGGCCCTTA................................................................................................................................................................................................. 19 1 2 1411.50 2823 16 1547 994 128 125 2 2 0 0 9
.......................................ACCACGTAGCCGGCCCTT.................................................................................................................................................................................................. 18 1 2 1377.50 2755 10 2212 403 100 20 1 1 6 0 2
......................................................................................TCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 27 0 14 1278.64 17901 12341 4693 130 584 1 5 139 2 0 6
.......................................ACCACGTAGCCGGCCCTTTGC............................................................................................................................................................................................... 21 2 2 1001.00 2002 20 1111 711 83 49 2 20 1 4 1
.......................................ACCACGTAGCCGGCCCTTGGCT.............................................................................................................................................................................................. 22 2 2 997.00 1994 52 1286 428 125 98 0 3 0 0 2
......................................................................................TCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 25 0 14 934.00 13076 11183 1262 363 156 11 12 31 26 4 28
.......................................................................................CGTAAGATGGTGACTTGGTGGCTAGG.......................................................................................................................................... 26 1 14 850.21 11903 10876 1 0 1025 0 1 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGATGGCTACG.......................................................................................................................................... 28 1 16 798.38 12774 11967 473 14 291 0 4 6 19 0 0
.....................................................................................CTCGTAAGATGGTGACTTGCTGGCTACG.......................................................................................................................................... 28 1 14 785.43 10996 9939 751 26 268 0 2 1 9 0 0
.......................................ACCACGTAGCCGGCCCTTAGC............................................................................................................................................................................................... 21 1 2 724.50 1449 6 590 761 44 40 1 0 0 0 7
.......................................................................................CGTAAGATGGTGACTTGGTGGCTAC........................................................................................................................................... 25 0 14 624.07 8737 510 8065 26 74 0 19 38 1 3 1
.......................................................................................CGTAAGATGGTGACTTGTTGGCTACG.......................................................................................................................................... 26 1 14 606.86 8496 6907 458 65 577 0 323 144 14 7 1
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTAC........................................................................................................................................... 27 0 14 567.00 7938 705 7028 20 166 1 1 15 2 0 0
..................................................................................CCGCTCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 29 0 14 506.93 7097 960 33 177 5918 0 0 0 9 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCGA............................................................................................................................................ 26 1 14 445.36 6235 6001 0 0 234 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCGA............................................................................................................................................ 24 1 14 424.43 5942 4987 1 3 951 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 23 0 14 419.21 5869 1512 1837 1646 507 29 58 69 165 35 11
.......................................ACCACGTAGCCGGCCCTTAG................................................................................................................................................................................................ 20 1 2 413.50 827 51 201 470 56 33 0 0 0 0 16
.......................................ACCACGTAGCCGGCCCTTTG................................................................................................................................................................................................ 20 2 2 372.00 744 73 210 313 89 42 1 2 0 6 8
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCGACG.......................................................................................................................................... 28 1 14 370.36 5185 5050 2 1 130 0 0 0 2 0 0
.......................................................................................CGTAAGATGGTGACTTGATGGCTACG.......................................................................................................................................... 26 1 16 364.75 5836 4457 350 37 414 0 449 124 2 3 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCCACG.......................................................................................................................................... 28 1 14 328.57 4600 4468 19 1 112 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCTA............................................................................................................................................ 26 1 14 322.07 4509 4127 171 73 127 0 0 0 11 0 0
.....................................................................................CTCTTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 301.07 4215 4073 20 7 110 1 1 1 0 0 2
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTATG.......................................................................................................................................... 28 1 14 290.71 4070 3977 8 0 85 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGCTGGCTACG.......................................................................................................................................... 26 1 14 268.07 3753 2632 532 51 306 0 167 61 1 1 2
...........................................................................................AGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 22 0 14 260.86 3652 555 1566 43 15 0 1368 91 1 10 3
......................................................................................CCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 27 1 15 232.13 3482 3255 30 0 192 1 0 2 0 0 2
.......................................ACCACGTAGCCGGCCCTTTGCTTG............................................................................................................................................................................................ 24 2 2 228.00 456 20 90 287 35 19 0 2 1 0 2
......................................................................................CCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 25 1 15 226.80 3402 3311 10 4 76 0 0 0 1 0 0
........................................................................................GTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 25 0 14 223.00 3122 1389 1330 97 129 0 21 136 18 1 1
..................................................................................CCGCTCGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 28 0 14 218.36 3057 348 1008 398 1262 3 0 9 29 0 0
........................................CCACGTAGCCGGCCCTTA................................................................................................................................................................................................. 18 1 4 213.75 855 8 462 312 46 22 0 1 1 0 3
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCAACG.......................................................................................................................................... 28 1 14 199.29 2790 2718 2 0 70 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTTGCTT............................................................................................................................................................................................. 23 2 2 199.00 398 33 129 165 39 12 2 9 0 6 3
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCTAGG.......................................................................................................................................... 28 2 14 188.86 2644 2598 0 0 46 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTT............................................................................................................................................................................................. 23 1 2 173.00 346 23 92 186 20 14 0 0 0 0 11
.......................................................................................CGTAAGATGGTGACTTGTTGGCTA............................................................................................................................................ 24 1 14 159.57 2234 1406 102 426 236 0 33 6 22 3 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGATA............................................................................................................................................ 26 1 14 159.14 2228 2146 0 0 81 0 0 0 0 0 1
........................................CCACGTAGCCGGCCCTTT................................................................................................................................................................................................. 18 2 6 150.83 905 11 442 337 83 27 1 2 1 0 1
.......................................................................................CGTAAGATGGTGACTTGGTGGATA............................................................................................................................................ 24 1 14 149.93 2099 1766 2 2 328 0 0 0 1 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCGACG.......................................................................................................................................... 26 1 14 138.71 1942 1743 5 0 193 0 1 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGTCTACG.......................................................................................................................................... 28 1 14 134.14 1878 1827 7 0 44 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCCACG.......................................................................................................................................... 26 1 14 131.64 1843 1635 19 2 185 0 2 0 0 0 0
....................................................................................GCTCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 29 0 14 126.50 1771 1571 12 115 69 0 0 3 1 0 0
...................................................................................CGCTCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 28 0 14 125.21 1753 1131 431 56 123 0 3 4 5 0 0
......................................................................................TCGTAAGATGGTGACTTGGTGGCGA............................................................................................................................................ 25 1 14 122.86 1720 1691 1 0 28 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 25 0 14 121.86 1706 109 1096 360 63 7 0 17 51 1 2
.......................................................................................CTTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 117.21 1641 1385 12 3 189 14 7 6 0 0 25
...............................................................................................GGTGACTTGGTGGCTACG.......................................................................................................................................... 18 0 14 115.50 1617 200 1390 0 6 0 16 4 0 1 0
.......................................................................................CGTAAGATGGTGACTTGATGGCTA............................................................................................................................................ 24 1 16 111.94 1791 1170 61 83 198 0 173 41 24 41 0
.......................................ACCACGTAGCCGGCCCTTG................................................................................................................................................................................................. 19 2 2 107.00 214 2 127 53 13 17 0 1 1 0 0
.......................................ACCACGTAGCCGGCCCTTTGGT.............................................................................................................................................................................................. 22 3 2 105.50 211 63 0 2 146 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGATGGCTA............................................................................................................................................ 26 1 16 104.50 1672 1496 82 24 44 0 16 5 5 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCTATG.......................................................................................................................................... 26 1 14 104.43 1462 1324 9 1 127 0 0 0 0 0 1
.....................................................................................CTCGTAAGATGGTGACTTGGAGGCTACG.......................................................................................................................................... 28 1 14 104.07 1457 1395 14 0 47 0 0 0 1 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTTG............................................................................................................................................................................................ 24 1 2 103.00 206 3 53 130 13 6 0 0 0 0 1
...........................................................................................AGATGGTGACTTGGTGGCTA............................................................................................................................................ 20 0 14 102.64 1437 221 334 278 3 4 587 1 0 3 6
.....................................................................................CTCGTAAGATGGTGACTTGCTGGCTA............................................................................................................................................ 26 1 14 99.36 1391 1207 119 21 34 0 3 1 5 0 1
..........................................................................................AAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 23 0 14 98.93 1385 458 583 106 38 2 49 103 4 40 2
.....................................................................................CTCGTAAGATGGTGACTTGGCGGCTACG.......................................................................................................................................... 28 1 14 91.43 1280 1222 35 2 21 0 0 0 0 0 0
........................................................................................GTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 23 0 14 91.43 1280 898 215 59 52 1 23 21 3 1 7
.....................................................................................CTCGTAAGATGGTGAATTGGTGGCTACG.......................................................................................................................................... 28 1 14 90.07 1261 1234 2 1 24 0 0 0 0 0 0
.....................................................................................CTCGTACGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 81.79 1145 1119 1 0 25 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTTGCTACG.......................................................................................................................................... 28 1 14 81.29 1138 1108 0 1 29 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCAACG.......................................................................................................................................... 26 1 14 77.50 1085 981 5 1 98 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGCTGGCTA............................................................................................................................................ 24 1 14 76.07 1065 680 84 129 124 0 24 7 12 5 0
.....................................................................................CCCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 15 74.80 1122 1074 23 3 21 0 0 0 1 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGTTACG.......................................................................................................................................... 28 1 14 73.93 1035 1007 6 0 22 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTTGCTTGG........................................................................................................................................................................................... 25 2 2 73.50 147 9 109 5 20 1 1 0 1 1 0
....................................................................................GCTCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 27 0 14 72.64 1017 139 739 108 15 1 8 3 3 0 1
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTCCG.......................................................................................................................................... 28 1 14 71.93 1007 976 1 0 30 0 0 0 0 0 0
..................................................................................CCGCTCGTAAGATGGTGACTTGGTGGCGA............................................................................................................................................ 29 1 14 71.36 999 140 0 0 859 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTGGC............................................................................................................................................................................................... 21 2 2 71.00 142 2 76 55 2 7 0 0 0 0 0
......................................................................................TCGTAAGATGGTGACTTGTTGGCTACG.......................................................................................................................................... 27 1 14 67.50 945 837 65 7 32 0 0 4 0 0 0
......................................................................................TCGTAAGATGGTGACTTGGTGGCTAGG.......................................................................................................................................... 27 1 14 64.29 900 876 0 0 24 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTGG................................................................................................................................................................................................ 20 2 2 60.00 120 28 26 26 32 8 0 0 0 0 0
.....................................................................................CTCGTAAGATGGGGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 59.57 834 802 4 0 25 0 0 1 2 0 0
.......................................ACCACGTAGCCGGCCCTTTGCTTGGG.......................................................................................................................................................................................... 26 2 2 59.50 119 3 66 43 5 0 1 1 0 0 0
.............................................................................................ATGGTGACTTGGTGGCTACG.......................................................................................................................................... 20 0 14 59.14 828 18 784 7 2 0 4 8 0 5 0
......................................................................................TCGTAAGATGGTGACTTGTTGGCTA............................................................................................................................................ 25 1 14 58.86 824 770 14 32 5 0 0 2 1 0 0
.........................................................................................TAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 24 0 14 58.21 815 190 487 42 36 1 16 31 0 12 0
......................................................................................TCGTAAGATGGTGACTTGGTGGCTAC........................................................................................................................................... 26 0 14 55.36 775 109 625 9 17 0 0 12 0 3 0
.......................................................................................CATAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 53.43 748 694 6 1 43 1 2 1 0 0 0
........................................CCACGTAGCCGGCCCTTTGCT.............................................................................................................................................................................................. 21 2 4 52.50 210 9 110 39 34 6 1 9 0 2 0
.......................................ACCACGTAGCCGGCCCTTTGCTTGGGCCC....................................................................................................................................................................................... 29 2 2 49.50 99 7 6 67 17 0 0 0 2 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGTCTACG.......................................................................................................................................... 26 1 14 49.36 691 608 5 3 73 0 2 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTCT................................................................................................................................................................................................ 20 3 4 49.25 197 3 87 76 26 4 0 0 1 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCGA............................................................................................................................................ 26 2 14 46.57 652 632 0 0 20 0 0 0 0 0 0
.....................................................................................GTCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 46.21 647 605 14 0 28 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGG............................................................................................................................................... 21 0 14 45.93 643 168 207 56 13 3 162 19 5 2 8
.....................................................................................CTCGTAAGATGGCGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 45.36 635 584 33 2 16 0 0 0 0 0 0
......................................................................................TCGTAAGATGGTGACTTGGTGGATA............................................................................................................................................ 25 1 14 45.21 633 616 0 0 17 0 0 0 0 0 0
............................................................................................GATGGTGACTTGGTGGCTACG.......................................................................................................................................... 21 0 14 44.93 629 22 487 26 0 0 40 46 0 8 0
.....................................................................................CTCGTAAGATGGTGACTAGGTGGCTACG.......................................................................................................................................... 28 1 14 44.93 629 605 3 0 21 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGCTGGCTAGG.......................................................................................................................................... 28 2 14 43.36 607 599 0 0 8 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGGT.............................................................................................................................................................................................. 22 2 2 43.00 86 22 0 0 63 1 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTCGCT.............................................................................................................................................................................................. 22 2 2 41.00 82 12 26 20 21 3 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGATGGCTAGG.......................................................................................................................................... 28 2 16 40.50 648 638 0 0 10 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTTGG........................................................................................................................................................................................... 25 1 2 39.50 79 4 56 10 9 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGAGGCTACG.......................................................................................................................................... 26 1 14 38.36 537 467 14 1 55 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCGACG.......................................................................................................................................... 28 2 14 38.00 532 520 0 0 12 0 0 0 0 0 0
........................................CCACGTAGCCGGCCCTTAGCT.............................................................................................................................................................................................. 21 1 4 37.75 151 8 72 43 23 5 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTACT.......................................................................................................................................... 28 1 14 37.36 523 454 50 2 15 0 0 0 2 0 0
...................................................................................CGCTCGTAAGATGGTGACTTGGTGG............................................................................................................................................... 25 0 14 35.93 503 37 324 120 12 0 6 3 1 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCCACG.......................................................................................................................................... 28 2 14 35.93 503 493 1 0 9 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTCGGTGGCTACG.......................................................................................................................................... 28 1 14 35.36 495 451 26 0 18 0 0 0 0 0 0
..............................................................................CCGTCCGCTCGTAAGATGG.......................................................................................................................................................... 19 0 14 35.21 493 6 477 0 0 3 0 0 0 0 7
......................................................................................TCGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 24 0 14 34.86 488 44 234 176 23 4 0 1 5 0 1
............................................GTAGCCGGCCCTTTGCTTGGGCCCGGCGG.................................................................................................................................................................................. 29 1 14 34.79 487 19 464 0 4 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGAATTGGTGGCTACG.......................................................................................................................................... 26 1 14 34.07 477 425 1 1 45 0 1 0 3 0 1
.....................................................................................CACGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 33.50 469 456 3 0 10 0 0 0 0 0 0
..................................................................................CCGCTCGTAAGATGGTGAC...................................................................................................................................................... 19 0 14 32.93 461 17 294 102 11 13 1 0 5 0 18
......................................................................................CCGTAAGATGGTGACTTGGTGGCGA............................................................................................................................................ 25 2 15 32.87 493 483 0 0 10 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGCGGCTACG.......................................................................................................................................... 26 1 14 31.79 445 354 39 6 46 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTTGGGCCC....................................................................................................................................................................................... 29 1 2 31.50 63 0 0 57 6 0 0 0 0 0 0
.......................................................................................CGTACGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 31.14 436 384 2 2 48 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTTGCTACG.......................................................................................................................................... 26 1 14 31.14 436 381 2 2 49 0 2 0 0 0 0
......................................................................................TCGTAAGATGGTGACTTGATGGCTA............................................................................................................................................ 25 1 16 31.13 498 457 14 12 10 0 4 0 1 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTTGGG.......................................................................................................................................................................................... 26 1 2 31.00 62 0 22 33 1 3 0 0 0 0 3
..................................................................................CCGCTCGTAAGATGGTGACTTGTTGGCTA............................................................................................................................................ 29 1 14 30.86 432 80 1 12 339 0 0 0 0 0 0
.....................................................................................CTTGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 16 30.56 489 471 8 2 7 0 0 0 0 0 1
.....................................................................................CTCTTAAGATGGTGACTTGTTGGCTACG.......................................................................................................................................... 28 2 14 30.43 426 423 0 0 3 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGGGGCTACG.......................................................................................................................................... 28 1 14 30.00 420 393 19 0 8 0 0 0 0 0 0
....................................................................................GCTCGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 26 0 14 29.64 415 6 190 189 0 1 4 21 1 2 1
.......................................ACCACGTAGCCGGCCCTTACCT.............................................................................................................................................................................................. 22 2 2 29.50 59 13 4 7 32 3 0 0 0 0 0
.....................................................................................CTCGTAAGTTGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 29.07 407 390 2 0 15 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTAACTTGGTGGCTACG.......................................................................................................................................... 28 1 15 29.07 436 411 5 0 20 0 0 0 0 0 0
........................................CCACGTAGCCGGCCCTTAG................................................................................................................................................................................................ 19 1 4 29.00 116 31 25 39 5 0 0 0 0 0 16
.......................................................................................CGTAAGATGGGGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 28.64 401 269 9 0 37 1 60 18 5 2 0
.....................................................................................CTCGTAAGATGGTGACTTGGGGGCTA............................................................................................................................................ 26 1 14 28.50 399 388 0 0 11 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGTTGGCTAGG.......................................................................................................................................... 26 2 14 28.29 396 375 0 0 21 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGATGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 27.29 382 364 8 0 9 0 0 0 1 0 0
.....................................................................................CTCGTAAGATGGTGACCTGGTGGCTACG.......................................................................................................................................... 28 1 14 27.07 379 336 28 1 14 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCTCCG.......................................................................................................................................... 26 1 14 27.07 379 343 1 1 33 0 1 0 0 0 0
.....................................................................................CTCGTAAGAGGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 26.86 376 347 13 1 12 0 0 0 3 0 0
.......................................ACCACGTAGCCGGCCCTTTGCTC............................................................................................................................................................................................. 23 3 2 26.50 53 4 24 4 17 0 0 3 0 1 0
.......................................................................................CGTAAGATGGTGACTTGGTGGTTACG.......................................................................................................................................... 26 1 14 25.86 362 312 8 0 36 0 6 0 0 0 0
..........................................................................................AAGATGGTGACTTGGTGGCTA............................................................................................................................................ 21 0 14 25.50 357 141 110 48 17 0 13 6 19 3 0
.....................................................................................CTCGTAAGATGGTGATTTGGTGGCTACG.......................................................................................................................................... 28 1 14 25.21 353 338 8 0 6 0 0 0 0 0 1
......................................................................................TCGTAAGATGGTGACTTGATGGCTACG.......................................................................................................................................... 27 1 16 25.06 401 345 33 2 14 0 0 6 0 0 1
.......................................ACCACGTAGCCGGCCCTTC................................................................................................................................................................................................. 19 2 3 25.00 75 1 29 30 10 4 0 1 0 0 0
.....................................................................................CTCGTAAAATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 24.93 349 333 8 1 7 0 0 0 0 0 0
........................................CCACGTAGCCGGCCCTTTG................................................................................................................................................................................................ 19 2 4 24.75 99 40 26 25 5 1 0 0 0 0 2
.............................................................TGGGCCCGGCGGGCGCACCGTC........................................................................................................................................................................ 22 0 14 24.50 343 6 194 59 9 62 0 5 0 1 7
.....................................................................................CTCATAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 24.14 338 323 6 0 8 0 0 0 1 0 0
.........................................................................................TAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 22 0 14 23.93 335 211 57 49 8 0 4 3 0 1 2
.....................................................................................CTCGTAAGATGGTGACTTGGTGTCTA............................................................................................................................................ 26 1 14 23.57 330 312 1 6 11 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCTATG.......................................................................................................................................... 28 2 14 23.43 328 320 0 0 8 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGGGGCTA............................................................................................................................................ 24 1 14 23.29 326 263 3 0 55 1 1 0 3 0 0
...............................................................GGCCCGGCGGGCGCACCGTC........................................................................................................................................................................ 20 0 14 23.29 326 0 324 2 0 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTT............................................................................................................................................ 26 1 14 23.29 326 310 1 1 14 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCAACG.......................................................................................................................................... 28 2 14 22.86 320 315 0 0 4 0 0 0 1 0 0
..................................................................................CCGCTCGTAAGATGGTGACTTGGTGGATA............................................................................................................................................ 29 1 14 22.57 316 47 0 0 269 0 0 0 0 0 0
.....................................................................................CTCGTAAGACGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 22.07 309 283 19 3 4 0 0 0 0 0 0
..................................................................................CCGCTCGTAAGATGGTGACTT.................................................................................................................................................... 21 0 14 22.00 308 14 162 101 8 11 1 0 0 0 11
..................................................................................CCGCTCGTAAGATGGTGA....................................................................................................................................................... 18 0 14 21.86 306 15 222 7 9 13 0 0 17 0 23
..................................................................................CCGCTCGTAAGATGGTGACT..................................................................................................................................................... 20 0 14 21.79 305 11 170 98 5 11 0 0 1 0 9
............................................................................CACCGTCCGCTCGTAAGATG........................................................................................................................................................... 20 0 14 21.71 304 0 302 2 0 0 0 0 0 0 0
................................................CCGGCCCTTTGCTTGGGCCCGGCGGGCG............................................................................................................................................................................... 28 1 14 21.43 300 122 76 9 91 0 0 1 1 0 0
.....................................................................................CTCGGAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 21.14 296 290 0 0 6 0 0 0 0 0 0
.....................................................................................CTCGTAGGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 21.00 294 270 18 0 6 0 0 0 0 0 0
........................................CTACGTAGCCGGCCCTTAGC............................................................................................................................................................................................... 20 0 1 21.00 21 1 7 8 2 2 1 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGTTGGCGA............................................................................................................................................ 24 2 14 20.64 289 253 0 0 36 0 0 0 0 0 0
.....................................................................................TTCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 20.57 288 260 24 1 3 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTACA.......................................................................................................................................... 28 1 14 20.50 287 271 8 2 4 0 0 0 2 0 0
......................................................................................TCGTAAGATGGTGACTTGCTGGCTA............................................................................................................................................ 25 1 14 20.36 285 249 17 15 3 0 0 1 0 0 0
......................................................................................TCGTAAGATGGTGACTTGCTGGCTACG.......................................................................................................................................... 27 1 14 20.36 285 225 42 3 11 0 0 4 0 0 0
.....................................................................................CGCGTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 26 1 14 20.29 284 271 0 0 13 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCTT............................................................................................................................................ 24 1 14 20.29 284 235 4 3 42 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGCTACT.......................................................................................................................................... 26 1 14 20.21 283 204 39 5 29 0 1 2 3 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGG............................................................................................................................................... 23 0 14 20.00 280 77 136 52 8 0 0 0 3 0 4
.......................................................................................CGTAAGATGGTGACTAGGTGGCTACG.......................................................................................................................................... 26 1 14 19.36 271 237 3 0 30 1 0 0 0 0 0
...................................................................................CGCTCGTAAGATGGTGACTT.................................................................................................................................................... 20 0 14 19.29 270 24 123 51 3 14 16 31 0 0 8
.....................................................................................CTCGTGAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 19.21 269 252 12 1 4 0 0 0 0 0 0
.......................................................................................CGTAAGATGGCGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 19.21 269 197 28 3 36 0 2 2 1 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGTCTA............................................................................................................................................ 24 1 14 19.07 267 218 2 2 44 1 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTC............................................................................................................................................................................................. 23 2 2 19.00 38 0 24 6 8 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGACTACG.......................................................................................................................................... 28 1 14 18.64 261 239 15 2 5 0 0 0 0 0 0
.....................................................................................CTCGTAAGGTGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 18.50 259 233 22 1 3 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTCGGTGGCTACG.......................................................................................................................................... 26 1 14 18.07 253 198 28 2 19 1 3 0 1 0 1
...................................................................................CGCTCGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 27 0 14 17.86 250 18 108 48 17 1 14 41 1 2 0
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTGCG.......................................................................................................................................... 28 1 14 17.64 247 219 22 0 6 0 0 0 0 0 0
.......................................................................................CGTAAAATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 17.64 247 199 29 1 15 1 2 0 0 0 0
.................................................CGGCCCTTTGCTTGGGCCCGGCGGGCG............................................................................................................................................................................... 27 1 14 17.50 245 49 68 97 21 2 3 2 3 0 0
.....................................................................................CTCGTAAGATGGTGACTTGATGGCGA............................................................................................................................................ 26 2 16 17.31 277 270 0 0 7 0 0 0 0 0 0
...........................................................................................AGATGGTGACTTGGTGG............................................................................................................................................... 17 0 14 17.07 239 0 0 0 0 0 239 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTTCCT.............................................................................................................................................................................................. 22 3 3 17.00 51 10 0 4 36 1 0 0 0 0 0
......................................TACCACGTAGCCGGCCCTT.................................................................................................................................................................................................. 19 1 1 17.00 17 0 11 1 3 2 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGATA............................................................................................................................................ 26 2 14 16.07 225 221 0 0 4 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTTGCTTGGGC......................................................................................................................................................................................... 27 2 2 16.00 32 1 7 24 0 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGCTTGGGC......................................................................................................................................................................................... 27 1 2 16.00 32 0 5 26 0 0 0 0 0 0 1
.......................................ACCACGTAGCCGGCCCTTTGTT.............................................................................................................................................................................................. 22 3 2 15.50 31 8 1 2 19 0 0 1 0 0 0
.....................................................................................CTCGTAATATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 15.50 217 206 5 1 5 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTG................................................................................................................................................... 19 0 14 15.36 215 39 153 4 7 3 0 0 1 0 8
.......................................................................................CGTAAGATGGTGACTTGTTGGCT............................................................................................................................................. 23 1 14 15.29 214 54 17 114 21 0 3 3 2 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGGCTAC........................................................................................................................................... 27 1 14 15.21 213 62 139 0 11 0 0 0 1 0 0
.....................................................................................CTCGTAAGATGGAGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 15.07 211 193 6 1 10 0 0 0 1 0 0
............................................GTAGCCGGCCCTTAGCTTGGGCCCGGCGG.................................................................................................................................................................................. 29 0 14 15.00 210 1 207 0 2 0 0 0 0 0 0
...........................................................CTTGGGCCCGGCGGGCGCACC........................................................................................................................................................................... 21 0 14 14.93 209 10 195 0 0 1 0 0 0 0 3
.......................................................................................CATAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 24 1 14 14.79 207 179 2 0 24 0 0 0 2 0 0
.....................................................................................CGCGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 14.79 207 201 2 0 4 0 0 0 0 0 0
...........................................................CTTGGGCCCGGCGGGCGCA............................................................................................................................................................................. 19 0 14 14.71 206 1 205 0 0 0 0 0 0 0 0
......................................................................................CCGTAAGATGGTGACTTGTTGGCTACG.......................................................................................................................................... 27 2 15 14.60 219 207 0 0 12 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTTGTCTACG.......................................................................................................................................... 28 2 14 14.50 203 194 1 0 8 0 0 0 0 0 0
......................................................................................CCGTAAGATGGTGACTTGGTGGCTAGG.......................................................................................................................................... 27 2 15 14.47 217 206 0 0 11 0 0 0 0 0 0
.............................................................TGGGCCCGGCGGGCGCACCG.......................................................................................................................................................................... 20 0 14 14.43 202 0 183 1 0 18 0 0 0 0 0
.................................................CGGCCCTTAGCTTGGGCCCGGCGGGCG............................................................................................................................................................................... 27 0 14 14.36 201 28 54 105 12 0 1 0 1 0 0
........................................CCACGTAGCCGGCCCTTG................................................................................................................................................................................................. 18 2 4 14.25 57 0 31 20 2 4 0 0 0 0 0
........................................................................................GTAAGATGGTGACTTGGTGGCTAC........................................................................................................................................... 24 0 14 14.14 198 6 187 1 0 0 0 4 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGTGGGCTACG.......................................................................................................................................... 28 2 14 14.07 197 190 4 0 3 0 0 0 0 0 0
.....................................................................................CTCTTAAGATGGTGACTTGGTGGCTAGG.......................................................................................................................................... 28 2 14 14.07 197 194 0 0 3 0 0 0 0 0 0
.......................................................................................CGTAAGAGGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 14.07 197 142 7 1 13 3 16 2 1 2 10
.....................................................................................CTCGTAAGATGGTGAATTGGTGGCTA............................................................................................................................................ 26 1 14 14.00 196 187 0 1 8 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGCC.............................................................................................................................................................................................. 22 2 2 14.00 28 2 11 11 2 2 0 0 0 0 0
.......................................ACTACGTAGCCGGCCCTTTGCT.............................................................................................................................................................................................. 22 1 1 14.00 14 1 3 1 8 1 0 0 0 0 0
......................................................................................TTGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 27 1 16 13.94 223 208 15 0 0 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGATGGCTAGG.......................................................................................................................................... 26 2 16 13.88 222 203 0 0 19 0 0 0 0 0 0
.......................................................................................TGTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 16 13.81 221 176 13 1 16 1 6 0 0 0 8
.......................................................................................CGTAAGATGGTGACTTGATGGCGA............................................................................................................................................ 24 2 16 13.75 220 184 0 0 36 0 0 0 0 0 0
........................................................................GGCGCACCGTCCGCTCGTA................................................................................................................................................................ 19 0 14 13.64 191 3 175 0 0 0 0 0 0 0 13
......................................................................................CCGTAAGATGGTGACTTGTTGGCTA............................................................................................................................................ 25 2 15 13.60 204 201 0 0 3 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGCTGGCGA............................................................................................................................................ 26 2 14 13.43 188 180 0 0 8 0 0 0 0 0 0
.....................................................................................CTCGTAAGAAGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 13.29 186 178 3 0 5 0 0 0 0 0 0
...........................................................................................AGATGGTGACTTGGTGGCTAC........................................................................................................................................... 21 0 14 13.29 186 2 178 4 0 0 1 1 0 0 0
.............................................................TGGGCCCGGCGGGCGCACCGT......................................................................................................................................................................... 21 0 14 13.21 185 0 121 33 0 28 0 0 0 0 3
........................................................................................GTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 22 0 14 13.07 183 14 79 61 4 1 6 14 2 2 0
..............................................................................CCGTCCGCTCGTAAGATG........................................................................................................................................................... 18 0 14 13.07 183 1 175 0 3 0 0 0 3 0 1
.......................................ACCGCGTAGCCGGCCCTTAGCT.............................................................................................................................................................................................. 22 2 2 13.00 26 0 11 12 2 1 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACCTGGTGGCTACG.......................................................................................................................................... 26 1 14 13.00 182 138 23 4 17 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGAATTGGTGGCTA............................................................................................................................................ 24 1 14 12.93 181 154 2 1 22 0 0 0 1 0 1
...................................................................................CGCTCGTAAGATGGTGACTTGGTGGCGA............................................................................................................................................ 28 1 14 12.86 180 163 0 0 17 0 0 0 0 0 0
.....................................................................................CTCGTACGATGTTGACTTGGTGGCTACG.......................................................................................................................................... 28 2 14 12.86 180 176 0 0 4 0 0 0 0 0 0
..................................................................................CCGCTCGTAAGATGGTGACTTG................................................................................................................................................... 22 0 14 12.64 177 9 106 51 4 3 0 0 0 0 4
..............................................................................CCGTCCGCTCGTAAGATGGTG........................................................................................................................................................ 21 0 14 12.64 177 2 166 2 4 1 0 1 0 0 1
..................................................................................CCGCTCGTAAGATGGTGACTTGATGGCTA............................................................................................................................................ 29 1 16 12.50 200 35 1 1 163 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTGGCTT............................................................................................................................................................................................. 23 2 2 12.50 25 1 8 13 2 1 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTAGTT.............................................................................................................................................................................................. 22 2 2 12.50 25 1 1 8 15 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGG.................................................................................................................................................. 20 0 14 12.29 172 40 114 7 6 0 0 0 5 0 0
.....................................................................................CTCGTAAGATGGTGGCTTGGTGGCTACG.......................................................................................................................................... 28 1 14 12.14 170 154 13 0 3 0 0 0 0 0 0
..................................................................................CCGCTCGTAAGATGGTGACTTGCTGGCTA............................................................................................................................................ 29 1 14 12.07 169 25 0 5 138 0 0 0 1 0 0
...........................................................CTTGGGCCCGGCGGGCGC.............................................................................................................................................................................. 18 0 14 12.07 169 10 151 2 0 0 0 0 1 0 5
................................................CCGGCCCTTTGCTTGGGCCCGGCGGGCGC.............................................................................................................................................................................. 29 1 14 12.00 168 23 17 5 123 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGGGGCTACG.......................................................................................................................................... 26 1 14 12.00 168 127 23 0 18 0 0 0 0 0 0
......................................TACCACGTAGCCGGCCCTTT................................................................................................................................................................................................. 20 2 1 12.00 12 0 5 3 2 1 0 1 0 0 0
.......................................ACCACGTAGCCGGCCCTTGGCTTG............................................................................................................................................................................................ 24 2 2 12.00 24 2 7 10 1 4 0 0 0 0 0
......................................................................................CCGTAAGATGGTGACTTGGTGGATA............................................................................................................................................ 25 2 15 11.93 179 176 0 0 3 0 0 0 0 0 0
..................................................................................CCGCTCGTAAGATGGTGACTTGTTGGCT............................................................................................................................................. 28 1 14 11.93 167 23 13 33 98 0 0 0 0 0 0
.................................................................................TCCGCTCGTAAGATGGTGACTTGGTGGCT............................................................................................................................................. 29 0 14 11.86 166 25 2 72 42 0 0 0 25 0 0
.......................................................................................CGTAAGATGGTGACTTGCTGGCTAGG.......................................................................................................................................... 26 2 14 11.71 164 150 0 0 14 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTCGGTGGCTA............................................................................................................................................ 24 1 14 11.71 164 117 7 5 30 1 0 1 2 0 1
...........................................................CTTGGGCCCGGCGGGCGCACCG.......................................................................................................................................................................... 22 0 14 11.64 163 16 131 3 3 3 0 0 0 0 7
.......................................ACCGCGTAGCCGGCCCTTTGCT.............................................................................................................................................................................................. 22 3 2 11.50 23 0 12 7 2 1 0 0 0 1 0
.......................................ACCACGTCGCCGGCCCTTAGCT.............................................................................................................................................................................................. 22 2 2 11.50 23 0 1 10 1 9 0 0 0 0 2
.....................................................................................CTCGTAAGATGGTGACTTGGTGGCTACGC......................................................................................................................................... 29 1 14 11.50 161 85 65 1 10 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTGGGTGGCTACG.......................................................................................................................................... 26 1 14 11.43 160 36 5 0 3 2 84 17 0 1 12
.........................................................................GCGCACCGTCCGCTCGTAAG.............................................................................................................................................................. 20 0 14 11.43 160 0 154 3 0 0 0 0 0 0 3
........................................CCACGTAGCCGGCCCTTAGC............................................................................................................................................................................................... 20 1 4 11.25 45 2 14 27 2 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGATTTGGTGGCTACG.......................................................................................................................................... 26 1 14 11.21 157 133 5 1 14 0 2 0 0 0 2
..................................................................................CCGCTCGTAAGATGGTGACTTGGTGG............................................................................................................................................... 26 0 14 11.14 156 29 68 44 8 1 0 4 2 0 0
.....................................................................................CTCGTAAGATGGTGACTCGGTGGCTA............................................................................................................................................ 26 1 14 11.07 155 142 4 2 6 1 0 0 0 0 0
.....................................................................................CTCGTAAGATTGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 10.93 153 148 3 0 2 0 0 0 0 0 0
......................................................................................TCGTAAGATGGTGACTTGGTGGCCACG.......................................................................................................................................... 27 1 14 10.93 153 137 3 0 12 0 0 0 0 0 1
.......................................................................................CGTGAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 10.86 152 122 19 2 9 0 0 0 0 0 0
.....................................................................................CTCTTAAGATGGTGACTTGGTGGCTA............................................................................................................................................ 26 1 14 10.86 152 123 6 5 5 3 0 0 0 0 10
.....................................................................................CTCCTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 10.79 151 133 9 3 6 0 0 0 0 0 0
.....................................................................................CTCGTAAGATGGTGACTTGGTAGCTACG.......................................................................................................................................... 28 1 14 10.79 151 139 8 0 3 0 0 0 1 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGTCGA............................................................................................................................................ 24 2 14 10.71 150 127 0 0 23 0 0 0 0 0 0
.......................................................................................CGTAAGTTGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 10.64 149 126 1 0 22 0 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGG.................................................................................................................................................. 18 0 14 10.64 149 17 116 0 11 2 0 1 0 0 2
.......................................................................................CGTAAGATGGTGACTTGCTGGCGA............................................................................................................................................ 24 2 14 10.57 148 128 0 0 20 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTTGCTG............................................................................................................................................................................................. 23 3 2 10.50 21 0 20 1 0 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTTGCGT............................................................................................................................................................................................. 23 3 2 10.50 21 11 0 0 10 0 0 0 0 0 0
.....................................................................................CTCGTAAGATAGTGACTTGGTGGCTACG.......................................................................................................................................... 28 1 14 10.50 147 137 7 1 2 0 0 0 0 0 0
.......................................ACCACGTAGCCGGCCCTTATCT.............................................................................................................................................................................................. 22 2 2 10.50 21 0 6 14 1 0 0 0 0 0 0
.......................................ACCACTTAGCCGGCCCTTTGCT.............................................................................................................................................................................................. 22 3 2 10.50 21 2 14 4 0 1 0 0 0 0 0
.......................................................................................CGTAAGATGGTGACTTGGTGGC.............................................................................................................................................. 22 0 14 10.43 146 0 142 4 0 0 0 0 0 0 0
................................................CCGGCCCTTAGCTTGGGCCCGGCGGGCG............................................................................................................................................................................... 28 0 14 10.36 145 54 45 9 37 0 0 0 0 0 0
............................................GTAGCCGGCCCTTTGCTTGGGCCCGGCG................................................................................................................................................................................... 28 1 14 10.36 145 10 131 0 4 0 0 0 0 0 0
................................................................................GTCCGCTCGTAAGATGGTG........................................................................................................................................................ 19 0 14 10.29 144 1 142 0 0 0 0 0 0 0 1
.................................................................................TCCGCTCGTAAGATGGTGAC...................................................................................................................................................... 20 0 14 10.21 143 3 64 50 1 2 0 0 3 0 20
...............................................................................CGTCCGCTCGTAAGATGGT......................................................................................................................................................... 19 0 14 10.14 142 5 127 1 1 4 0 2 0 0 2
...................................................................................CGCTCGTAAGATGGTGACT..................................................................................................................................................... 19 0 14 10.07 141 15 105 10 1 2 1 3 0 0 4
.....................................................................................CTCTTAATATGGTGACTTGGTGGCTACG.......................................................................................................................................... 28 2 14 10.07 141 136 0 0 5 0 0 0 0 0 0
......................................................................................TCTTAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 27 1 14 10.07 141 134 1 0 4 1 0 0 0 0 1
.................................................................................TCCGCTCGTAAGATGGTGA....................................................................................................................................................... 19 0 14 10.00 140 1 108 13 0 9 0 0 2 0 7
.......................................ACCACGTAGTCGGCCCTTTGCT.............................................................................................................................................................................................. 22 3 2 10.00 20 0 6 10 1 2 0 1 0 0 0
.......................................................................................CGTAAGATGGTGACTTGCTGGCT............................................................................................................................................. 23 1 14 10.00 140 43 17 62 11 0 1 4 1 1 0
.......................................................................................CGAAAGATGGTGACTTGGTGGCTACG.......................................................................................................................................... 26 1 14 9.86 138 9 2 0 2 5 84 34 0 1 1
..................................................................................CCGCTCGTAAGATGGTGACTTGGTGGC.............................................................................................................................................. 27 0 14 9.86 138 5 107 23 2 0 0 0 1 0 0
...............................................................................CGTCCGCTCGTAAGATGG.......................................................................................................................................................... 18 0 14 9.86 138 3 127 0 4 1 0 0 1 0 2
.......................................................................................CGTAAGATGGGGACTTGGTGGCTA............................................................................................................................................ 24 1 14 9.79 137 91 1 0 20 1 6 0 16 2 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group4:1436093-1436343 - dps_1656 AAAAAA--TGAAA--------------------CCAAAAA--CAGCAAA--------------AA---------A--TC-CAA-A-AA-G--CATG----ATGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTG-GGCT-------------------------------------------------------------------------------------------------------TGAAGGCCAA--------------------------------------ATGTT-----------------AAG-TTAG-----------------------------------------------------------------------------AA----AAATGGCCAACGAAG------CAGATA---------------------------------------------------------GCAAATGT---------------------------------ATGTA-TTTTTTCCC-ATTTTTCCAGCTATGTACCTCCGCGACTCTGGGGCTTTAGTGGTCATGTGCAAACGGTTT
droPer2 scaffold_10:440930-441182 - AAAAAA--TGAAA--------------------CCAAAAA--CAGCAAA--------------AA---------A--TCCAAA-A-AA-G--CATG----ATGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTA-GGTT-------------------------------------------------------------------------------------------------------TGAAGGCCAA--------------------------------------ATGTG-----------------AAC-TTAG-----------------------------------------------------------------------------AA----AAATGGCCAACGAAG------CAGATA---------------------------------------------------------GAAAATGT---------------------------------ATGTATTTTTTTCCG-ATTTTTCCAGCTATGTACCTCCGCGACTCTGGGGCTTTAGTGGTCATGTGCAAACGGTTT
droWil2 scf2_1100000004521:11966283-11966543 + dwi_1372 ATAAAA--ATAAAAGTTTTG-------------------G--C-----------------AGAC----------------AA-AAAAA---TTAAG----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTC-GAAA-------------------------------------------------------------------------------------------------------TTAAGA--------------------------------------------CTC-------------------------CAG-------------------------------------------------------CTCCATAAGGGCA----------------------CACAA------CTAGTG---------------------------------------------------------AAAACGATTTGTTTATAATGCTGAATTTAA---TCAATT--------TACTGTTAATTGTTTTGCAGTTATATACCGCCACGTTTGTGGGGCTTCAGTGGACATGTGCAGACTGTAT
droVir3 scaffold_12963:5575431-5575585 + AAAAAA--TGATA------C-TACTTTGCATTAATA---------------------------AG---ATAT--------AA-AATAA---TTGTT----CTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCTATA-AATT-------------------------------------------------------------------------------------------------------GAG-G---------------------------------------------ATC-------------------------AAA-------------------------------------------------------ATTTATAGTGTTA----------------------AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droMoj3 scaffold_6500:24989194-24989561 + AAAAAA--AAAAA--------------------ATAGAAA--AAGTTA--------------------AAAAATAA-TTGAAA-A-AA-G--TGGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGAG-TGCT-------------------------------------------------------------------------------------------------------GGGGAACAGGCAGTCAACTTTATGCGCTCACACGCAGCTGTTTGCGTAGTGCCGCTCTTAACATTATTACTGCTGTTAAAGTGCAACAGTTTGTTGCTGTT-AAGTTAGTCATATTTATATTTGAAA---------------------------------------------------------------------------------TGAATTAACAGCTGTTTATCTT----------------------------------AAATATTTTTTTATATCAT-GC----A-ATTATTATA-CAATTTGCAGCTATGTTCCACCACGTCTATGGGGATTCAGCGGTCATGTTCAGACCGTAT
droGri2 scaffold_7425:325-487 + AGATAA--TGTAA--------------------AAAAAAATCAAGAAAA--------------A-------T--ATTTTTAAA-A-AAGGATTGTT----ATGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTTGC-GATC-------------------------------------------------------------------------------------------------------GGATGTTCAA--------------------------------------TTATC-----------------AAA-TAAG-----------------------------------------------------------------------------AG----CATTGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12913:389269-389538 + AAAAAA--AAAAA---------------------TAA-----------------------ATAA----------------AAA-A-AA-G-TGAGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTT-TGAG-------------------------------------------------------------------------------------------------------TTGCGGCAAA--------------------------------------GTGAA-----------------TAC-TTAATTG-ATAAGTTCTTCC-------------------------------------------------------------AA----CTATCACCAGTGAAGTTTTCTCAGATC---------------------------------------------------------TCATAAA------------------TATTA---ACATTTTT----ATTTTTATTTT-TATTTTTTAGATATATTCCACCACGGCTTTGGGGGTTCAGTGGTCATGTCCAGACCGTTT
droBip1 scf7180000394771:15959-16087 - AAAAAA--TAAAA--------------------TTTTCAA--GGGCCA-A-------------A-----------------AA-A-AA-G--ATGG----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTCTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTTTGGAGTCAAA---------------------
droKik1 scf7180000302476:2919988-2920180 + AGAAAA--GTAAA--------------------ATAAAAA--GAGGAA------------------------------------AAAA---AGTAC----TTGGAGATGCCGGGGATTGAA-------------------------------------CCCGGGGCCTCTCACATGCAAAGCGAGCGCTCTACCACTGAGCTACATCCCCTGTGCCGGCAATGTCCGCTAAATGCTGTTACA-AGCC-------------------------------------------------------------------------------------------------------AAG-A---------------------------------------------GCC-------------------------CAA-------------------------------------------------------GACGAAATGGTGA----------------------CGCAG------CAGTTA---------------------------------------------------------GTAAATGT---------------------------------TTGTA-T------------------------------------------------------------------GTT
droFic1 scf7180000453924:1151228-1151569 + CAAAACCGAAACG--CCATGTCGG----------------------AA-AAAAACTTGTAGCCAAACGAAAT---------------------------------------------------TAAATAGCACAATAAGCAAACG--GAAAA--GAAATTAAGGGTTTTT-------------------------------------------------------------------------------------------------TGAAAGATAAGCAATTTGCTGATAAAAAGAATTAACTTGTGTTATGAAATTTCTGTTTTGTATTCACTTTTAAATAATGCGATAAGAAGCCAA--------------------------------------GTGAA-----------------AGC-TTCATAAAATAAAATTTTACTTTTGTTTTCGTTGATTCTTTTTGTAGTTAAGATATGAATATATTTATTATATTA----------------------A-----------------CTTAAAC------------------------------------------------------------------------------------A---------A----TTTCTT-ACTCCTTTAGCTACATTCCACCACGTCTTTGGGGCTTCAGTGGTCATGTCCAGACAGTTT
droEle1 scf7180000491046:965773-965973 + AAAAAA--TAAAT--------------------ATAAATA--TAAATAA--------------T-------C--ATTTT-TAA-A-AA-G-TTCGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCATGGG-TGTACATGTCAAAA------------------------------------------------------------------------------------------------TACCCA--------------------------------------GTGAT-----------------ATT-TTTA-----------------------------------------------------------------------------AA----AACAGGCCATTGAAT------AAGGGAGATAAAAAGATT-----------------------------------------------------------------------T------TTTAT---------------------T------------------------------------------------------CCT
droRho1 scf7180000780078:51455-51567 + AATATA--TGAAA------C-CAC----------------------AA-AAAAATTTAC---------------------AA-AAAAA---TTGAT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302188:2233823-2234151 + AAATAT--TGGAA--------------------A---------------------------AACAAAAAAATG--------------------TAT----TTTTATATGTGGCCAAAAGACAACAAATCGCGCAATCAGCAAGTCCGGCAAAATAAAAATGA-------------------------------------------------------------------------------------------------CGGCTTTTTGACTGATAAGAAGTTTGCTGATAAAAGAATTTAACTTGAGCTGTGAACTTTTGGTTTT-TATACATTTCTGAATGAT----------------------------------------------------------------------------------------------TT------------------------------------------------------------------------------------C------AAGGGTGATAAGCAAGTTTTTTAATTAAAATCATCATTTATTCACCTTATGGCCAAACTTCCA----C------------AGCTTTTCT---A---ATGAACCC----A-CTACTTTCA-CCCCTTCCAGTTACATTCCTCCGCGTCTTTGGGGCTTCAGTGGTCATGTCCAGACGGTTT
droTak1 scf7180000415399:723427-723582 + ATAAAA--AGAAA--------------------ATAAAG----------------------TAA----------------AA-ATAAA---TCCGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCATGTA-GGCCCGCGGCAGAATTT-------------CCCGGCAATAACTGAGTTACAAATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409452:1084229-1084386 + AATAAT--TTA----------------------------------------------------------------------AA-A-AA-G--CAAT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCATGAA-AATGACCGTCGAAA------------------------------------------------------------------------------------------------TATCCA--------------------------------------GT-----------------------------------------------------------------------------------------------CATAAGCTTAAAGCTAAATAG---------G------CTGATA---------------------------------------------------------GTAATTCT---------------------------------A---------------------------------------------------------------------------
dm3 chr2L:3166812-3167019 + AACAAG------------------------------------------------ATCGGAATAAAATGAAATA--------------------TAT----TCATATAGCTTGCCAACGGAAAAGAAGTAGCTTAATCAACATTTATAA---------------------------------------------------------------------------------------------------------------TAGGTTTACGACCCATGCAATAATTGCTGATTAAAGAATCTAAAGTACGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------A---ATAATCCC----A-TTCTTTTCA-CTCTTTCCAGATACATTCCCCCGCGACTTTGGGGCTTTAGTGGCCATGTGCAGACGGTCT
droSim2 2l:3040984-3041206 + AGAGTG--CAATG--TCAAG-GGC----------------------AA-ACAAGTTCGGAATAAAATGAAATA--------------------TATCTA---CCATAGGTGGCCAACGGAAGAGAAGTAGCTTAATCAACATTTATAG---------------------------------------------------------------------------------------------------------------TA-------------TACCGTAATTGCTGATTAAAGAATCTAAAGTACGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTACTT------TTAATCCC----A-TTCTCTTCA-CTCTTTTCAGATACGTTCCCCCGCGACTTTGGGGCTTTAGTGGCCACGTGCAGACGGTCT
droSec2 scaffold_5:1318323-1318548 + AGAGTG--CAATG--TCAAG-GGC----------------------AA-ACAAGTTCGGAATAAAATGAAATA--------------------TATCTA---ACATAGGTGGCCAACGGAAGAGAAGTAGCTTAATCAACATTTATAG---------------------------------------------------------------------------------------------------------------TA-------------CACGATAATTGCTGATTAAAGAATCTAAAGTACGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTACTTTTA---AAAATCCC----A-TTCTATTCA-CTCTTTTCAGATACGTTCCCCCGCGACTTTGGGGCTTTAGTGGCCATGTGCAGACGGTCT
droYak3 2L:3162649-3162865 + AATGTC-----------AAG-GGC----------------------AA-ACAAGTTCAGAATAAAATAAAATG--------------------TATGCATGTACATAGGTGGCCAACGGAAAGCCAGTTGCTTAATCAGCATTCATAG---------------------------------------------------------------------------------------------------------------TAGGTTTTTGACCCATACGCTATTTGCTGACTTAAGAATATAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------T------GTAAT-CC----A-TTCTTTCCA-CACATTTCAGGTACATTCCCCCGCGACTCTGGGGCTTTAGTGGCCATGTCCAAACAGTTT
droEre2 scaffold_4929:3210175-3210382 + AATGTC-----------AAG-GGC----------------------AA-ACAAGTTCAGAATAAAATAAAATG--------------------TATCTACGTACATACGT------------ACAAATAGCAGTATCAGCATTTATAG---------------------------------------------------------------------------------------------------------------TAGGATTTTGACCCATACGATATTTGCTGATTAAGGGGAATA---TACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------TTAATAC-AC--GTCTCTTTCCA-CACTTTTCAGATACATTCCCCCGAGACTTTGGGGCTTCAGTGGCCATGTCCAGACAGTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AAAAAA--TGAAA--------------------CCAAAAA--CAGCAAA--------------AA---------A--TC-CAA-A-AA-G--CATG----ATGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTG-GGCT-------------------------------------------------------------------------------------------------------TGAAGGCCAA--------------------------------------ATGTT-----------------AAG-TTAG-----------------------------------------------------------------------------AA----AAATGGCCAACGAAG------CAGATA---------------------------------------------------------GCAAATGT---------------------------------ATGTA-TTTTTTCCC-ATTTTTCCAGCTATGTACCTCCGCGACTCTGGGGCTTTAGTGGTCATGTGCAAACGGTTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................AA-G--CATG----ATGCATCGGCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTTAGTGGTCATGTGC.........1911.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGACTCTGGGGCTTTAGTGGTC...............2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTTAGTGGTCATGTGC.........2011.0010100000000
...............................................................................................................................................................................................ACCACTGAACCACC-------------------------GATGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.1720100000010
.......................................................................................................................................................................................AGCATTCTACCACTGAACCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.1420200000000
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810100000000
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710001000000
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710100000000
.....................................................................................................................................................................................CGAGCATTCTACCACTGAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710100000000
..........................................................................................................................................................................................ATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710001000000
.........................................................................................................................................................................................CATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.0710100000000
...........................................................................................................................................................................................TTCTACCACTGAACCACC-------------------------GATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.0710100000000
.............................................................................................................................................................................................CTACCACTGAACCACC-------------------------GATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710100000000
............................................................................................................................................................................................TCTACCACTGAACCACC-------------------------GATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.0710100000000
.....................................................................................................................................................................CCGCCCGCGTGGCAGGCGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0710100000000
droPer2
AAAAAA--TGAAA--------------------CCAAAAA--CAGCAAA--------------AA---------A--TCCAAA-A-AA-G--CATG----ATGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTA-GGTT-------------------------------------------------------------------------------------------------------TGAAGGCCAA--------------------------------------ATGTG-----------------AAC-TTAG-----------------------------------------------------------------------------AA----AAATGGCCAACGAAG------CAGATA---------------------------------------------------------GAAAATGT---------------------------------ATGTATTTTTTTCCG-ATTTTTCCAGCTATGTACCTCCGCGACTCTGGGGCTTTAGTGGTCATGTGCAAACGGTTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTACCTCCGCGACT................................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTTAGTGGTCATGTGCAAACGGT..2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTACCTCCGCGACTCTGG............................2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTGGGGCTTTAGTGGTCATGTGC.........2711.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTGGGGCTTTAGTGGTCATGT...........2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGGGGCTTTAGTG..................2011.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTGGGGCTTTAGTG..................1811.001000001
.............................................................................................................................................................................................CTACCACTGAACCACC-------------------------GAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071100000
droWil2
ATAAAA--ATAAAAGTTTTG-------------------G--C-----------------AGAC----------------AA-AAAAA---TTAAG----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTC-GAAA-------------------------------------------------------------------------------------------------------TTAAGA--------------------------------------------CTC-------------------------CAG-------------------------------------------------------CTCCATAAGGGCA----------------------CACAA------CTAGTG---------------------------------------------------------AAAACGATTTGTTTATAATGCTGAATTTAA---TCAATT--------TACTGTTAATTGTTTTGCAGTTATATACCGCCACGTTTGTGGGGCTTCAGTGGACATGTGCAGACTGTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................CATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2291.781685030
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCTTCAGTGGACATGTGC.........2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGGGCTTCAGTGGACATGTGC.........2711.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACATGTGCAGACTGT..1911.00100010
....................................................................................................TTGCATCGGCCGGGAATCGAA-------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.80870100
.........................................................................................................................................................................................CATTCTACCACTGAACCACC-------------------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.56503011
.....................................................................................................TGCATCGGCCGGGAATCGAA-------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.42521002
.............................................................................................................................................................................................CTACCACTGAACCACC-------------------------GATGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.33321000
.................................................................................................................GAATCGAA-------------------------------------CCCG-GGCCGCCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.25311010
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.25320001
.................................................................................................................GAATCGAA-------------------------------------CCCG-GGCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.25312000
..........................................................................................................................................................................................ATTCTACCACTGAACCACC-------------------------GAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.22202000
.........................................................................................................................................................................................CATTCTACCACTGAACCACC-------------------------GG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.22220000
.....................................................................................................................................................................................CGAGCATTCTACCACTGAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.22200101
..........................................................................................................................................................................................ATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.22211000
...........................................................................................................................................................................................TTCTACCACTGAACCACC-------------------------GATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.22210100
....................................................................................................TTGCATCGGCCGGGAATCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.20211000
......................................................................................................GCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.17220000
................................................................................................................GGAATCGAA-------------------------------------CCCG-GGCCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.17202000
........................................................................................................................................................................................GCATTCTACCACTGAACCACC-------------------------GATGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14101000
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGCTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.11101000
............................................................................................................................................................................CGTGGCAGGCGAGCATTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.11101000
............................................................................................................................................................................CGTGGCAGGCGAGCATTCTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11101000
...............................................................................................................................................................................................ACCACTGAACCACC-------------------------GATGCTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.11101000
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCCCGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.11110000
............................................................................................................................................................................................TCTACCACTGAACCACC-------------------------GATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11110000
...................................................................................................................ATCGAA-------------------------------------CCCG-GGCCGCCCGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11101000
....................................................................................................................TCGAA-------------------------------------CCCG-GGCCGCCCGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11100010
...............................................................................................................................................................................GGCAGGCGAGCATTCTACCACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.11101000
.........................................................................................................TCGGCCGGGAATCGAA-------------------------------------CCCG-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.11202000
....................................................................................................TTGCATCGGCCGGGAATCGAA-------------------------------------CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10110000
....................................................................................................TTGCATCGGCCGGGAATCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.10110000
....................................................................................................TTGCATCGGCCGGGAATCGAA-------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.10110000
................................................................................................................GGAATCGAA-------------------------------------CCCG-GGCCGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.08101000
..............................................................................................................CGGGAATCGAA-------------------------------------CCCG-GGCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08110000
.....................................................................................................TGCATCGGCCGGGAATCGAA-------------------------------------CC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.08101000
................................................................................................................GGAATCGAA-------------------------------------CCCG-GGCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08101000
...................................................................................................................ATCGAA-------------------------------------CCCG-GGCCGCCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08101000
......................................................................................................GCATCGGCCGGGAATCGAA-------------------------------------CC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.08101000
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.08101000
........................................................................................................ATCGGCCGGGAATCGAA-------------------------------------CCCG-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.08101000
.....................................................................................................TGCATCGGCCGGGAATCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.08101000
..............................................................................................................CGGGAATCGAA-------------------------------------CCCG-GGCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.08100010
......................................................................................................GCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.08110000
........................................................................................................ATCGGCCGGGAATCGAA-------------------------------------CCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08110000
..........................................................................................................CGGCCGGGAATCGAA-------------------------------------CCCG-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.06101000
droVir3
AAAAAA--TGATA------C-TACTTTGCATTAATA---------------------------AG---ATAT--------AA-AATAA---TTGTT----CTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCTATA-AATT-------------------------------------------------------------------------------------------------------GAG-G---------------------------------------------ATC-------------------------AAA-------------------------------------------------------ATTTATAGTGTTA----------------------AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................CCACC-------------------------GATGCTTCTATA-AATT-------------------------------------------------------------------------------------------------------GAG-G---------------------------------------------........................................................................................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CCACC-------------------------GATGCTTCTATA-AATT-------------------------------------------------------------------------------------------------------GA........................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................CGAGCATTCTACCACTGAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.294001000000000001000000000000000000000000000000000000000000000020
........................................................................................................................................................................................GCATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.142200000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ATTCTACCACTGAACCACC-------------------------GATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.142020000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CATCGGCCGGGAATCGAA-------------------------------------CCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.142110000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.111010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CACTGAACCACC-------------------------GATGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.081000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................CATTCTACCACTGAACCACC-------------------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................ATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ACCACTGAACCACC-------------------------GATGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................CCG-GGCCGCCCGCGTGGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CATTCTACCACTGAACCACC-------------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGCATCGGCCGGGAATCGAA-------------------------------------CC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................CCACTGAACCACC-------------------------GATGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.071010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.071000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................TCTACCACTGAACCACC-------------------------GATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................TTCTACCACTGAACCACC-------------------------GATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGCATTCTACCACTGAACCACC-------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.071010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CGAGCATTCTACCACTGAACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GAA-------------------------------------CCCG-GGCCGCCCGCGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................CTACCACTGAACCACC-------------------------GATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TCGGCCGGGAATCGAA-------------------------------------CCCG-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAAAAA--AAAAA--------------------ATAGAAA--AAGTTA--------------------AAAAATAA-TTGAAA-A-AA-G--TGGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGAG-TGCT-------------------------------------------------------------------------------------------------------GGGGAACAGGCAGTCAACTTTATGCGCTCACACGCAGCTGTTTGCGTAGTGCCGCTCTTAACATTATTACTGCTGTTAAAGTGCAACAGTTTGTTGCTGTT-AAGTTAGTCATATTTATATTTGAAA---------------------------------------------------------------------------------TGAATTAACAGCTGTTTATCTT----------------------------------AAATATTTTTTTATATCAT-GC----A-ATTATTATA-CAATTTGCAGCTATGTTCCACCACGTCTATGGGGATTCAGCGGTCATGTTCAGACCGTATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................CTGAACCACC-------------------------GATGCTTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
...............................................................................................................................................................CCG-GGCCGCCCGCGTGGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071001000
droGri2
AGATAA--TGTAA--------------------AAAAAAATCAAGAAAA--------------A-------T--ATTTTTAAA-A-AAGGATTGTT----ATGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTTGC-GATC-------------------------------------------------------------------------------------------------------GGATGTTCAA--------------------------------------TTATC-----------------AAA-TAAG-----------------------------------------------------------------------------AG----CATTGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AAAAAA--AAAAA---------------------TAA-----------------------ATAA----------------AAA-A-AA-G-TGAGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTGTGTT-TGAG-------------------------------------------------------------------------------------------------------TTGCGGCAAA--------------------------------------GTGAA-----------------TAC-TTAATTG-ATAAGTTCTTCC-------------------------------------------------------------AA----CTATCACCAGTGAAGTTTTCTCAGATC---------------------------------------------------------TCATAAA------------------TATTA---ACATTTTT----ATTTTTATTTT-TATTTTTTAGATATATTCCACCACGGCTTTGGGGGTTCAGTGGTCATGTCCAGACCGTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................CCACC-------------------------GATGCTTGTGTT-TGAG-------------------------------------------------------------------------------------------------------TTG.......................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................AACCACC-------------------------GATGCTTGTGTT-TGAG-------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGCTTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
..........................................................................................................................................................................................ATTCTACCACTGAACCACC-------------------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.132000002
...............................................................................................T----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.081000001
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.081100000
..............................................................................................................................................................................................TACCACTGAACCACC-------------------------GATGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071100000
...............................................................................................................................................................................................ACCACTGAACCACC-------------------------GATGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071100000
..................................................................................................................AATCGAA-------------------------------------CCCG-GGCCGCCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061000001
.....................................................................................................................................................................................CGAGCATTCTACCACTGAACCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.061100000
.......................................................................................................................................................................................AGCATTCTACCACTGAACCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061000001
...........................................................................................................................................................................GCGTGGCAGGCGAGCATTCTACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.061000001
..........................................................................................................................................................................CGCGTGGCAGGCGAGCATTCTACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.061000001
...................................................................................................................ATCGAA-------------------------------------CCCG-GGCCGCCCGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061000001
droBip1
AAAAAA--TAAAA--------------------TTTTCAA--GGGCCA-A-------------A-----------------AA-A-AA-G--ATGG----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTCTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTTTGGAGTCAAA---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGAAAA--GTAAA--------------------ATAAAAA--GAGGAA------------------------------------AAAA---AGTAC----TTGGAGATGCCGGGGATTGAA-------------------------------------CCCGGGGCCTCTCACATGCAAAGCGAGCGCTCTACCACTGAGCTACATCCCCTGTGCCGGCAATGTCCGCTAAATGCTGTTACA-AGCC-------------------------------------------------------------------------------------------------------AAG-A---------------------------------------------GCC-------------------------CAA-------------------------------------------------------GACGAAATGGTGA----------------------CGCAG------CAGTTA---------------------------------------------------------GTAAATGT---------------------------------TTGTA-T------------------------------------------------------------------GTTSizeHit CountTotal NormTotal
No Reads
droFic1
CAAAACCGAAACG--CCATGTCGG----------------------AA-AAAAACTTGTAGCCAAACGAAAT---------------------------------------------------TAAATAGCACAATAAGCAAACG--GAAAA--GAAATTAAGGGTTTTT-------------------------------------------------------------------------------------------------TGAAAGATAAGCAATTTGCTGATAAAAAGAATTAACTTGTGTTATGAAATTTCTGTTTTGTATTCACTTTTAAATAATGCGATAAGAAGCCAA--------------------------------------GTGAA-----------------AGC-TTCATAAAATAAAATTTTACTTTTGTTTTCGTTGATTCTTTTTGTAGTTAAGATATGAATATATTTATTATATTA----------------------A-----------------CTTAAAC------------------------------------------------------------------------------------A---------A----TTTCTT-ACTCCTTTAGCTACATTCCACCACGTCTTTGGGGCTTCAGTGGTCATGTCCAGACAGTTTSizeHit CountTotal NormTotal
No Reads
droEle1
AAAAAA--TAAAT--------------------ATAAATA--TAAATAA--------------T-------C--ATTTT-TAA-A-AA-G-TTCGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCATGGG-TGTACATGTCAAAA------------------------------------------------------------------------------------------------TACCCA--------------------------------------GTGAT-----------------ATT-TTTA-----------------------------------------------------------------------------AA----AACAGGCCATTGAAT------AAGGGAGATAAAAAGATT-----------------------------------------------------------------------T------TTTAT---------------------T------------------------------------------------------CCTSizeHit CountTotal NormTotal
No Reads
droRho1
AATATA--TGAAA------C-CAC----------------------AA-AAAAATTTAC---------------------AA-AAAAA---TTGAT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAATAT--TGGAA--------------------A---------------------------AACAAAAAAATG--------------------TAT----TTTTATATGTGGCCAAAAGACAACAAATCGCGCAATCAGCAAGTCCGGCAAAATAAAAATGA-------------------------------------------------------------------------------------------------CGGCTTTTTGACTGATAAGAAGTTTGCTGATAAAAGAATTTAACTTGAGCTGTGAACTTTTGGTTTT-TATACATTTCTGAATGAT----------------------------------------------------------------------------------------------TT------------------------------------------------------------------------------------C------AAGGGTGATAAGCAAGTTTTTTAATTAAAATCATCATTTATTCACCTTATGGCCAAACTTCCA----C------------AGCTTTTCT---A---ATGAACCC----A-CTACTTTCA-CCCCTTCCAGTTACATTCCTCCGCGTCTTTGGGGCTTCAGTGGTCATGTCCAGACGGTTTSizeHit CountTotal NormTotal
No Reads
droTak1
ATAAAA--AGAAA--------------------ATAAAG----------------------TAA----------------AA-ATAAA---TCCGT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCATGTA-GGCCCGCGGCAGAATTT-------------CCCGGCAATAACTGAGTTACAAATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AATAAT--TTA----------------------------------------------------------------------AA-A-AA-G--CAAT----TTGCATCGGCCGGGAATCGAA-------------------------------------CCCG-GGCCGCCCGCGTGGCAGGCGAGCATTCTACCACTGAACCACC-------------------------GATGCTTCATGAA-AATGACCGTCGAAA------------------------------------------------------------------------------------------------TATCCA--------------------------------------GT-----------------------------------------------------------------------------------------------CATAAGCTTAAAGCTAAATAG---------G------CTGATA---------------------------------------------------------GTAATTCT---------------------------------A---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AACAAG------------------------------------------------ATCGGAATAAAATGAAATA--------------------TAT----TCATATAGCTTGCCAACGGAAAAGAAGTAGCTTAATCAACATTTATAA---------------------------------------------------------------------------------------------------------------TAGGTTTACGACCCATGCAATAATTGCTGATTAAAGAATCTAAAGTACGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------A---ATAATCCC----A-TTCTTTTCA-CTCTTTCCAGATACATTCCCCCGCGACTTTGGGGCTTTAGTGGCCATGTGCAGACGGTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGGCTTTAGTGGCG...............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGCTTTAGTGGCCATGTGC.........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCCATGTGCAGACGGTC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCCGCGACTTTGGGGCTTTAGT...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGGGCTTTAGTGGCCATGTGCAG.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGCGACTTTGGGGCTTTAGT...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGGGCTTTAGTGGC................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTTTGGGGCTTTAGTGGCCATGT...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGCTTTAGTGGCCATG............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGCTTTAGTGGCCAT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGGGCTTTAGTGGCGC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AACGGAAAAGAAGTAGCTTAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTGGGGCTTTAGTGGCCATGT...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGGCTTTAGTGGCCATGTGCAGA......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATTCCCCCGCGACTTTGGGGCTTTAG....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TATAGCTTGCCAACGGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGGGCTTTAGTGGCCA..............2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCGACTTTGGGGCTTTAGTGG.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGCTTTAGTGGCCATGTG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGGCTTTAGTGGCGC..............1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGGGCTTTAGTGGCGCA.............2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGGCTTTAGTGGCGT..............1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGAGTG--CAATG--TCAAG-GGC----------------------AA-ACAAGTTCGGAATAAAATGAAATA--------------------TATCTA---CCATAGGTGGCCAACGGAAGAGAAGTAGCTTAATCAACATTTATAG---------------------------------------------------------------------------------------------------------------TA-------------TACCGTAATTGCTGATTAAAGAATCTAAAGTACGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTACTT------TTAATCCC----A-TTCTCTTCA-CTCTTTTCAGATACGTTCCCCCGCGACTTTGGGGCTTTAGTGGCCACGTGCAGACGGTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AGAGTG--CAATG--TCAAG-GGC----------------------AA-ACAAGTTCGGAATAAAATGAAATA--------------------TATCTA---ACATAGGTGGCCAACGGAAGAGAAGTAGCTTAATCAACATTTATAG---------------------------------------------------------------------------------------------------------------TA-------------CACGATAATTGCTGATTAAAGAATCTAAAGTACGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTTACTTTTA---AAAATCCC----A-TTCTATTCA-CTCTTTTCAGATACGTTCCCCCGCGACTTTGGGGCTTTAGTGGCCATGTGCAGACGGTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTGGGGCTTTAGTGGCCATGTGCA........2811.0010010
droYak3
AATGTC-----------AAG-GGC----------------------AA-ACAAGTTCAGAATAAAATAAAATG--------------------TATGCATGTACATAGGTGGCCAACGGAAAGCCAGTTGCTTAATCAGCATTCATAG---------------------------------------------------------------------------------------------------------------TAGGTTTTTGACCCATACGCTATTTGCTGACTTAAGAATATAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------T------GTAAT-CC----A-TTCTTTCCA-CACATTTCAGGTACATTCCCCCGCGACTCTGGGGCTTTAGTGGCCATGTCCAAACAGTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................CATAGGTGGCCAACGGAAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
AATGTC-----------AAG-GGC----------------------AA-ACAAGTTCAGAATAAAATAAAATG--------------------TATCTACGTACATACGT------------ACAAATAGCAGTATCAGCATTTATAG---------------------------------------------------------------------------------------------------------------TAGGATTTTGACCCATACGATATTTGCTGATTAAGGGGAATA---TACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------TTAATAC-AC--GTCTCTTTCCA-CACTTTTCAGATACATTCCCCCGAGACTTTGGGGCTTCAGTGGCCATGTCCAGACAGTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................G---------------------------------------------------------------------------------------------------------------TAGGATTTTGACCCATACGATATTTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000

Generated: 05/18/2015 at 01:15 AM