ID:

dps_1620

 Coordinate:

4_group3:8759234-8759384 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.9

Flybase annnotation

CDS [Dpse\GA18050-cds]; exon [dpse_GLEANR_1743:1]; intron [Dpse\GA18050-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGTTGAGCAATCGTGTGGCACCCTCGGCTGCCGCCGCTTTGCGTTGCAAGTAAGTATGGAGAGTGGAGAGATACGAGAGAGAGGAGGGGTTGTTGTTGTTGCTGTTATGGAACCACGTTGCAGATTGCAGCGGCGCAGTGTCATCTGTCAAGGTCATTGCAGTTGCCGGTCTCCAGTGACTGCGGCCCCCCAATGATGTTTTTTGTGTGCAATTACTGGTGCAATTTGTGGGCCAATGCGAATTCTGAGT
****************************************************************************************************************************************................((.....((((((((.((...)).))))))))....))************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 SRR902012
CNS imaginal disc
 GSM343916
embryo
 M062
head
CTGTTGAGCAATCGTGTGG........................................................................................................................................................................................................................................ 19 0 1 4.00 4 4 0 0 0 0 0
.........................................................................................................................................................................GTCTCCAGTGACTGCGGCCCC............................................................. 21 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................................CAGTGTCATCTGTCAAGGTCA.............................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.......................................TTGCGTTGCAAGTAGGTATGG............................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................CATTGCAGTTGCCGGTCTCC............................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
.......GCAATCGTGTGGCACCCTCGGCTGCC.......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...................CACCCTCGGCTGCCGCCGCTTTGCGTT............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
..........ATCGTGTGGCACCCTCGGCTGCC.......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.TGTTGAGCAATCGTGTGGCACCC................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................TGTGGGCCAATGCGAATTCTGAGT 24 0 1 1.00 1 0 0 0 1 0 0
.........AATCGTGTGGCACCCTCGGCTGCC.......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..................................................GTAAGTATGGAGAGTGGAG...................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
.........AATCGTGTGGCACCCTCGGCTGCCGCC....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1
................................................................................................................................................................CAGTTGCCGGTCTCCAGTGACT..................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...................................................TAAGTATGGAGAGAGGAGAG.................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................TCTCCAGTGACTGCGGCCCCC............................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................AGATTGCAGCGGCGCAGTGTC............................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
....................ACCCTCGGCTGCCGCCGCTTTGCGTT............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
........................................TGGGGTGGAAGTAAGTATGGAG............................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 1 0
......AGCAATCGTGTGGCACCCTCGGC.............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
........................................TGGGTTGCAAACAAGTATGGAG............................................................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0
.....................................................................................................GCTGTTATGGAACCACGTTT.................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0
CTGTTGAGCAACCGTGTGGC....................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.......GCAATCGTGTGGCACCCTCGGCTGC........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................TGGGTTGTAAGGAAGTATGGAG............................................................................................................................................................................................. 22 3 2 0.50 1 0 0 1 0 0 0
.............................................................................................................GGAACTACGGTGCAGATT............................................................................................................................ 18 2 2 0.50 1 1 0 0 0 0 0
........................................TGGAATGCAAGTAAGTATGGAG............................................................................................................................................................................................. 22 3 3 0.33 1 0 0 1 0 0 0
........................................TGGGATGCAAGGAAGTATGGAG............................................................................................................................................................................................. 22 3 3 0.33 1 0 0 1 0 0 0
........................................TGGATTGCAAGGAAGTATGGAG............................................................................................................................................................................................. 22 3 4 0.25 1 0 0 0 0 1 0
.................GGCGCCCTAGGCTTCCGCCGC..................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 1 0
....................................................................................................................................................................................................................AATACTGGTGCATTTTGTGCG.................. 21 3 6 0.17 1 1 0 0 0 0 0
........................................TGCAATGTAAGTAAGTATGGAG............................................................................................................................................................................................. 22 3 8 0.13 1 0 0 0 0 0 1
................................................................................................................................................................................................................TGAAATTACTGGTGGAAT......................... 18 2 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................CATTACAGTTGCCTGTCTCT............................................................................ 20 3 11 0.09 1 0 0 0 0 1 0
.................................................................................................................................................................................................................GCTATTATTGGTGCAATT........................ 18 2 13 0.08 1 0 0 0 0 0 1

Anti-sense strand reads

GACAACTCGTTAGCACACCGTGGGAGCCGACGGCGGCGAAACGCAACGTTCATTCATACCTCTCACCTCTCTATGCTCTCTCTCCTCCCCAACAACAACAACGACAATACCTTGGTGCAACGTCTAACGTCGCCGCGTCACAGTAGACAGTTCCAGTAACGTCAACGGCCAGAGGTCACTGACGCCGGGGGGTTACTACAAAAAACACACGTTAATGACCACGTTAAACACCCGGTTACGCTTAAGACTCA
*************************************************************................((.....((((((((.((...)).))))))))....))**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM444067
head
 M059
embryo
 SRR902010
ovaries
 M022
male body		 GSM343916
embryo
..................CGTGGGAGCCGACGGCGGCG..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................CCTCTCACCTCTCTATGCTCT............................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................GCCAGAGGTCACTGACGCCGG............................................................... 21 0 1 1.00 1 1 0 0 0 0 0
............................................TACGGTCATTTATACCTCTCACCTCTC.................................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
.............................ACGGCGGCGAAACGCAACGT.......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................AGTAACGTCAACGGCCAGAGGTCA......................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................CGGGGGGTTACTACAAAAAA.............................................. 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................CCTCTCACCTCTCTATGCTC............................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................ACCCGGTTACGCTTAAGACTC. 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................ACAGTAGACAGTTCCAGTAAC........................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................CGTAAACGGCCAGAGGATACT....................................................................... 21 3 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................................................................................GGTTCCTGCAAAAAACACA.......................................... 19 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................CAACAACAACAACGACAATA.............................................................................................................................................. 20 0 6 0.17 1 1 0 0 0 0 0
........................................................................................CCAACAACAACAACGACTAT............................................................................................................................................... 20 1 8 0.13 1 0 0 1 0 0 0
.............................................................................................................................................................................................AGGTTACTACACAAAACA............................................ 18 2 9 0.11 1 0 0 0 1 0 0
..........................................................CCTCTCTCCTCTCTGTGCTCT............................................................................................................................................................................ 21 2 10 0.10 1 1 0 0 0 0 0
.................................................................................CTACTCCGCAACAACAACAA...................................................................................................................................................... 20 2 10 0.10 1 1 0 0 0 0 0
.....................................................................................................CAACAATACCTTGGTGCCC................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 1 0
...........................CGAGGGCGGCGAAACACCAC............................................................................................................................................................................................................ 20 3 15 0.07 1 1 0 0 0 0 0
..................................................................................................................GTGCAACCTCTAAAGTCCC...................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group3:8759184-8759434 - dps_1620 CTGTTGAGCAATCGTGTGGCACCCTCGGCTGC---CGCCGCTTTGCGTTGCAAGTAAGTATGGAGAG---TG---GAGAGA----TA-----------------------------CGAGAGAGAGGAGGG-----------------------GTTGTTGTTGTTGCTGTTATG--G-------AACCACGTTGCAGATTGCA----------------------GCGGCGCAGTGTCATCTGTCAAGGTCAT--TGCAGTTGCCGGTCTC----CAGTGACTGCGGCCC-------------------------------------------------------CC---CAATGATGTTTTTTGTGTGCAATTACTGGTGCAATTTGTGGGCCAATGCGAATTCTG------A----GT
droPer2 scaffold_1:10212071-10212303 - CTGTTGAGCAACCGTGTGGCACCCTCGGCTGC---CGCCGCTTTGCGTTGCAAGTAAGTATGGAG-A-GA-----GGA---------------GG-G---------------------------------------------------------GTTGTTGTTGTTGCTGTTATG--G-------AACCACGTTGCAGATTGCA----------------------GCGGCGCAGTGTCATCTGTCAAGGTCAT--TGCAGTTGCCGGTCTC----CAGTGACTGCGGCCC-------------------------------------------------------CC---CAATGATGTTTTTTGTGTGCAATTACTGGTGCAATTTGTGGGCCAATGCGAATTCTG------A----GT
droWil2 scf2_1100000004585:7684579-7684753 + TTGTCGGTTAATCGTTTGGC---------ACC---CGCCGCCTTGCGTTGCAAGTAAGTGGATCAAG---CT---GTGGTTAAACTTGT---GGT-TGTTTTTGTT----TTTGGTG------------------------------------------------------------G-------GAACACGTTGCACAT-AGACACACACACAGACACGTACAGAGCAATGCAGTGTCATTTGTCAAGGTCAT--TGCATTTGCCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:12617110-12617279 + TTGACAGCAAACCGAGTCGTCATTAATTCACC---AGCCGTTTTACGTTGCAAGTAAGTCTCAA------TCTTCGTTGT-----TTTC-CC-T--CT-TGTT---------------------------------------------------GTTTTTGTTATAGTTGTTGT--TGCGCTCCATTACACGTCAGAA-----A----------------------GCGATGCAGTGTCATTTGCCAAGGTCAT--CGCAAATGCCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:7448764-7449025 - TTGACTGCAAACCGCATCGCTATCAATGCACC---AGCAGTTTTACGTTGCAAGTAAGTCTTAA------TTTCAGTTTT-----ATTC-AC-T---------GTT-----------------GAAGGCAG---------------------------TTTTTTTCGC--------TGCACTATGTAACACGTCGCAG-T-GCA-------------------------CTGCAGTGTCATTTGTCAAGGTCATTTTGTAAATGCCGGTCTATTTGTGC-----------TCC-A----TGCATGCGTGAGAATAAGGTTGTGTTATGTGTGTGTATATATATTTATA---CATGTGTGTGTGTATGCGCC-T-GGCTG-GATAATTT---------------------------------
droGri2 scaffold_14978:1039982-1040221 - GTGGCAGCAAACCGAATTGCAATCAGCTCACCGGCTGCTGTTCTCCGCTGCAAGTAAGTCTTGA------TGTTTGT-----TGCACTC---AAT-TG-TGTTGTA----CTTGCTTAA----------------------------------------------------------------TGTAACACGTTGCAA-----G---------------------------GCAGTGTCATTTGCCAAGGTCAT--TGCAAATGCCGGTTTATTTGTTC-----------TTT-ACAACTGTATGCGTG---------------TGTGTGTATGTGTATGTGTTTATAATGCATGCAT-----TTGTGTCT-CATACTG-GATAATTTGATA-----------------------------
droAna3 scaffold_12916:6477639-6477892 + TTGCTGAGCAACCGTTTCGC---------CCC---CGCCGCGATTCGCGCCAAGTAAGTAGATAGGGAAA-----GAGAG--------------------------------------AGTGGGACAGGAAGTCGCT-CCAGATTTTGAGTGTGGTTGTTGCTGTTGTTGTTTTGTTACCCCCATGAACACGTTGCAGAT-GCA---------------------------GCAGGGTCATTCGTCAAGGTCAT--TGCAGTTGCCGGTCTAATTGCAC--------------------------------------------------------------------A---TGTTTGTGTTTATTTTCTCC-ATTACTG-CATAATTTTTTTATCATTGCAATTG--TT--CTTG----GG
droBip1 scf7180000396568:339693-339944 - TTGCTGAGCAACCGTTTCGC---------CCC---CGCCGCGATTCGCGCCAAGTAAGTAGACAGGAAAC-----GAGAG---------------------------------------GGGAGGCAGGAAGTCGCT-TCTAAATTCGAGTGTGGTTGTTGTTTTTGTTGT-----TACCCCCATGAACACGTTGCAGAT-GCA---------------------------GCAGGGTCGTTCGTCAAGGTCAT--TGCAGTTGCCGGTCTAATTGCAC--------------------------------------------------------------------A---TGTTTGTGTTTATTTTCTCC-ATTACTG-CATAATTTTTTTGTCATTGCAAGTTTGCT----GAGCGTCT
droKik1 scf7180000302408:206878-207040 - TTGATCAGCAATCGATTGAC---------CCC---CGCCGCCATCCGCCGCAAGTGAGTACAGAG-A-AA-----GAGA------------------------------------TGGAAAGAACGAAAAAAGCGCCG---T------------ATTGTTTTTGTTGTTTTTTTGC-C-------AAACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453949:140441-140672 + TTGATCAGCAATCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTAAGTAAGAGCGA-AA-----GCGAGGG-GCTA----AATCAG-GTGGGAGA----TAGGAGGAAAAGAGACGGAAGGCCGCCG------------------------------------------------AACACGTTGCAAAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTTCAATTGTGT--------------------------------------------------------------------T---TGTTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGTCCTCGCGAATTTTGT----------CA
droEle1 scf7180000491273:1325702-1325943 + TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCATCCGCTGCAAGTGAGTAAGAGCGA-GA-----GGGAGAA--CAA----A-T---------GTT------GGGCAGAAAGAGACAAAGAGCCGCCG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGACCTGGCA-----------CACAAAAAACGCACAC-----------------------------------------T---TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGCCCTTGCGAATTTTTTTTCTAC----AC
droRho1 scf7180000768710:13836-14067 + TTGATCAGCAACCGATGGGC---------GCC---CGCCGCCATCCGCTGCAAGTGAGTAAGATAGG-GA-----GAGGGGGAGCTA----A-T----CCGGTGTGGCAATGGGGTAGAAAGAGACAAAAAGCCACTG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TACAGTTGCCGGTCGAAAT------------------------CGCATACG---------------------------------------TA---TATTTGTGTTTGTTTTCTCC-ATCACTG-CATAATTTGTTTGTCCTTGCGAATT----------------
droBia1 scf7180000302408:194980-195200 - TTGATCAGCAACCGATGGGC---------GCC---CGCCGCCCTCCGCTGCAAGTAAGTGAGAGAGA-GA-----GATGGGGTGATA----AAGCAG-GGAAAGTA------GG--GGAAAGGGACGGAAGGCCGCCG------------------------------------------------AACACGTTGCAAGT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAG-TGCCGGTCGAATTGCGC--------------------------------------------------------------------C---TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGTCCTTGCGAAT-----------------
droTak1 scf7180000415779:455896-456112 - TTGATCAGCAACCGATTGGC---------GCCCGTCGCCGCCCTCCGCTGCAAGTGAGTAGGGGCGA-AA-----GGGAGGGAGATA----GATCGG-GT-----------------AAAAGAGACGACAAATCGCTG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAATTGCGC--------------------------------------------------------------------T---TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGTCCTTGCGAATT----------------
droEug1 scf7180000407253:195160-195379 - TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGTTGCAAGTGAGTAAGAGAGA-AA-----GAAACAGAGATTTTA-AAAC-G-------------------GAAAAGAGACAAAAAGCCGCTG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAATTGCACTTA----------------------------------------------------------------T----TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGCCCTTGTAATCT--------------GT
dm3 chr2L:1987393-1987625 - TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GAGAGAGGGCTCCC---AGC-GGCCAGCGTG----CGTGCTGGAAAGAGACAGCAGGCCGACG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCAGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAGCTGCAGTGA----------------------------------------------------------------CA---CATTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTTGCGGGCTC---------------
droSim2 2l:1897914-1898151 - TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GAGAGACGGCTCCC---AGC-GGCCGGCGTG----CGTGCTTGAAAGAGACGGCAGGCTGCCG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAGCTGCAGTGA----------------------------------------------------------------CA---CATTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTTGCGGGCTCGTT----------CT
droSec2 scaffold_2763:2672-2909 - TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GTAAGAGGGCTCCC---AGC-GGCCGGCGTG----CGTGCTGGAAAGAGACGGCAGGCCGCCG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCAGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAGCCGCAGTGA----------------------------------------------------------------CA---CATTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTTGCGGGCTCGTT----------CT
droYak3 2L:1969042-1969274 - TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GAGCGAGTGCTCCCT--AGCCGGGCAGCGTG----C--GCTGGAAAGAGACGGCAGCACGCGG------------------------------------------------TACACGTTGCAAAT-GCA---------------------------GCAGTGTCATTTGCCAAGGTCAT--TCCAGTTGCCGGTCGCACTGCAGCGA----------------------------------------------------------------CA---CACTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTCGCGGACTC---------------
droEre2 scaffold_4929:2033281-2033496 - TTGATCAGCAACCGATTGGC---------GCC---TGCCGCCCTCCGTTGCAAGTGAGTAAGCGGGA---CG---GAGCGAGCGCTCCC---AGCGGGCCAGCGTG----C--GCTGGAAAGAGACGGCAGGCCGGGG-----------------------------------------------GTACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGCACTGCAGCGA----------------------------------------------------------------CA---CACTTGTGTTTGTTTTCACC-AGCACTG-CATAATTTG--------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTGTTGAGCAATCGTGTGGCACCCTCGGCTGC---CGCCGCTTTGCGTTGCAAGTAAGTATGGAGAG---TG---GAGAGA----TA-----------------------------CGAGAGAGAGGAGGG-----------------------GTTGTTGTTGTTGCTGTTATG--G-------AACCACGTTGCAGATTGCA----------------------GCGGCGCAGTGTCATCTGTCAAGGTCAT--TGCAGTTGCCGGTCTC----CAGTGACTGCGGCCC-------------------------------------------------------CC---CAATGATGTTTTTTGTGTGCAATTACTGGTGCAATTTGTGGGCCAATGCGAATTCTG------A----GTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
CTGTTGAGCAATCGTGTGG..................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040400000000
...........................................................................................................................................................................................................................................................................GTCTC----CAGTGACTGCGGCCC-------------------------------------------------------C..........................................................................2112.0020200000000
........................................................................................................................................................................................................................................CAGTGTCATCTGTCAAGGTCA........................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................CAT--TGCAGTTGCCGGTCTC----C................................................................................................................................................2011.0010100000000
.......GCAATCGTGTGGCACCCTCGGCTGC---C.................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................CACCCTCGGCTGC---CGCCGCTTTGCGTT....................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........ATCGTGTGGCACCCTCGGCTGC---C.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.TGTTGAGCAATCGTGTGGCACCC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCCAATGCGAATTCTG------A----GT2411.0010000000001
.........AATCGTGTGGCACCCTCGGCTGC---C.................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................GTAAGTATGGAGAG---TG---GAG.......................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
.........AATCGTGTGGCACCCTCGGCTGC---CGCC..............................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
..................................................................................................................................................................................................................................................................CAGTTGCCGGTCTC----CAGTGACT.........................................................................................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................TCTC----CAGTGACTGCGGCCC-------------------------------------------------------CC---......................................................................2111.0010100000000
....................................................................................................................................................................................................AGATTGCA----------------------GCGGCGCAGTGTC......................................................................................................................................................................................2111.0010100000000
....................ACCCTCGGCTGC---CGCCGCTTTGCGTT....................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......AGCAATCGTGTGGCACCCTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
......................................................................................................................................................................GCTGTTATG--G-------AACCACGTTT..................................................................................................................................................................................................................................2011.0010100000000
.......GCAATCGTGTGGCACCCTCGGCTGC---..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
droPer2
CTGTTGAGCAACCGTGTGGCACCCTCGGCTGC---CGCCGCTTTGCGTTGCAAGTAAGTATGGAG-A-GA-----GGA---------------GG-G---------------------------------------------------------GTTGTTGTTGTTGCTGTTATG--G-------AACCACGTTGCAGATTGCA----------------------GCGGCGCAGTGTCATCTGTCAAGGTCAT--TGCAGTTGCCGGTCTC----CAGTGACTGCGGCCC-------------------------------------------------------CC---CAATGATGTTTTTTGTGTGCAATTACTGGTGCAATTTGTGGGCCAATGCGAATTCTG------A----GTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGGCCAATGCGAATTCTG------A----GT2712.002200000
.............GTGTGGCACCCTCGGCTG......................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCCAATGCGAATTCTG------A----..2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCCAATGCGAATTCTG------G----..2211.001100000
...TTGAGCAACCGTGTGGCACC..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................TCGGCTGC---CGCCGCTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................GGAG-A-GA-----GGA---------------GG-G---------------------------------------------------------GTTGTTGTTGTTGC.............................................................................................................................................................................................................................................................2711.001000001
.....................................................GTAAGTATGGAG-A-GA-----GGA---------------GG-.....................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................................................................................AGGTCAT--TGCAGTTGCCGGTC.......................................................................................................................................................2111.001010000
droWil2
TTGTCGGTTAATCGTTTGGC---------ACC---CGCCGCCTTGCGTTGCAAGTAAGTGGATCAAG---CT---GTGGTTAAACTTGT---GGT-TGTTTTTGTT----TTTGGTG------------------------------------------------------------G-------GAACACGTTGCACAT-AGACACACACACAGACACGTACAGAGCAATGCAGTGTCATTTGTCAAGGTCAT--TGCATTTGCCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................GTTTTTGTT----TTTGGTG------------------------------------------------------------G-------GAA.........................................................................................................................................................................................................................................2011.00100010
..................GC---------ACC---CGCCGCCTTGCGTTG...................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
......................................................................................................................................................................................................................GACACGTACAGAGCAATGCAGTGT.......................................................................................................................................................................................2411.00100010
..................GC---------ACC---CGCCGCCTTGCGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................................................................................................................................................................................................................CACGTACAGAGCAATGCAGT.........................................................................................................................................................................................2011.00100010
...................C---------ACC---CGCCGCCTTGCGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................................................GTAAGTGGATCAAG---CT---GTG.......................................................................................................................................................................................................................................................................................................................................................1911.00100010
................TGGC---------ACC---CGCCGCCTTGCGTTGC..................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..................GC---------ACC---CGCCGCCTTGCGTTGC..................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..GTCGGTTAATCGTTTGGC---------ACC---CGCC..............................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
droVir3
TTGACAGCAAACCGAGTCGTCATTAATTCACC---AGCCGTTTTACGTTGCAAGTAAGTCTCAA------TCTTCGTTGT-----TTTC-CC-T--CT-TGTT---------------------------------------------------GTTTTTGTTATAGTTGTTGT--TGCGCTCCATTACACGTCAGAA-----A----------------------GCGATGCAGTGTCATTTGCCAAGGTCAT--CGCAAATGCCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............GTCGTCATTAATTCACC---AGCC..............................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000001000
..GACAGCAAACCGAGTCGTCATTA............................................................................................................................................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
............................CACC---AGCCGTTTTACGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000010000000000000000000000000000000
........AAACCGAGTCGTCATTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000010000010000000000000000000000000000000000000000000
........................AATTCACC---AGCCGTTTTACGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
........................AATTCACC---AGCCGTTTTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
...ACAGCAAACCGAGTCGTCATT.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..GACAGCAAACCGAGTCGTCATTAATTC........................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............AGTCGTCATTAATTCACC---AGCC..............................................................................................................................................................................................................................................................................................................................................................................................2211.001000001000000000000000000000000000000000000000000000000000000000
......................TTAATTCACC---AGCCGTTTTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
.........AACCGAGTCGTCATTAATTCACC---..................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
.....................ATTAATTCACC---AGCCGTTTTAC.......................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
................TCGTCATTAATTCACC---AGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...ACAGCAAACCGAGTCGTCATTAATT.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
....................CATTAATTCACC---AGCCGTTTTACGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..GACAGCAAACCGAGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.........................ATTCACC---AGCCGTTTTACGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.....AGCAAACCGAGTCGTCATTAATTCACC---..................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
........................AATTCACC---AGCCGTTTTAC.......................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
........AAACCGAGTCGTCATTAATTCACC---AGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.....................ATTAATTCACC---AGCCGTTTTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.................CGTCATTAATTCACC---AGCCGTT...........................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
........AAACCGAGTCGTCATTAATT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...............GTCGTCATTAATTCACC---AGCCGTT...........................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................CACC---AGCCGTTTTACGTTGC..................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TTGACTGCAAACCGCATCGCTATCAATGCACC---AGCAGTTTTACGTTGCAAGTAAGTCTTAA------TTTCAGTTTT-----ATTC-AC-T---------GTT-----------------GAAGGCAG---------------------------TTTTTTTCGC--------TGCACTATGTAACACGTCGCAG-T-GCA-------------------------CTGCAGTGTCATTTGTCAAGGTCATTTTGTAAATGCCGGTCTATTTGTGC-----------TCC-A----TGCATGCGTGAGAATAAGGTTGTGTTATGTGTGTGTATATATATTTATA---CATGTGTGTGTGTATGCGCC-T-GGCTG-GATAATTT---------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........AAACCGCATCGCTATCAA...........................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................ATGTAACACGTCGCAG-T-G...........................................................................................................................................................................................................................1811.001001000
........................................................................................................................................................................................................................................................................................................................ATAAGGTTGTGTTATGTGTGT........................................................................................2111.001100000
TTGACTGCAAACCGCATCGCC................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GTGGCAGCAAACCGAATTGCAATCAGCTCACCGGCTGCTGTTCTCCGCTGCAAGTAAGTCTTGA------TGTTTGT-----TGCACTC---AAT-TG-TGTTGTA----CTTGCTTAA----------------------------------------------------------------TGTAACACGTTGCAA-----G---------------------------GCAGTGTCATTTGCCAAGGTCAT--TGCAAATGCCGGTTTATTTGTTC-----------TTT-ACAACTGTATGCGTG---------------TGTGTGTATGTGTATGTGTTTATAATGCATGCAT-----TTGTGTCT-CATACTG-GATAATTTGATA-----------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................CCGGCTGCTGTTCTCCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.........................GCTCACCGGCTGCTGTTCTCCGCTGCA.................................................................................................................................................................................................................................................................................................................................................................................2711.00110
............................CACCGGCTGCTGTTCTCCGCTG...................................................................................................................................................................................................................................................................................................................................................................................2211.00110
droAna3
TTGCTGAGCAACCGTTTCGC---------CCC---CGCCGCGATTCGCGCCAAGTAAGTAGATAGGGAAA-----GAGAG--------------------------------------AGTGGGACAGGAAGTCGCT-CCAGATTTTGAGTGTGGTTGTTGCTGTTGTTGTTTTGTTACCCCCATGAACACGTTGCAGAT-GCA---------------------------GCAGGGTCATTCGTCAAGGTCAT--TGCAGTTGCCGGTCTAATTGCAC--------------------------------------------------------------------A---TGTTTGTGTTTATTTTCTCC-ATTACTG-CATAATTTTTTTATCATTGCAATTG--TT--CTTG----GGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................TTACCCCCATGAACACGTTGCA................................................................................................................................................................................................................................2211.001100000
..GCTGAGCAACCGTTTCGC---------CCC---CGC...............................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......AGCAACCGTTTCGC---------CCC---CGCC..............................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................TTATTTTCTCC-ATTACTG-C........................................1911.001010000
.................CGC---------CCC---CGCCGCGATTCGCG....................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
TTGCTGAGCAACCGTTTCGC---------CCC---CGCCGCGATTCGCGCCAAGTAAGTAGACAGGAAAC-----GAGAG---------------------------------------GGGAGGCAGGAAGTCGCT-TCTAAATTCGAGTGTGGTTGTTGTTTTTGTTGT-----TACCCCCATGAACACGTTGCAGAT-GCA---------------------------GCAGGGTCGTTCGTCAAGGTCAT--TGCAGTTGCCGGTCTAATTGCAC--------------------------------------------------------------------A---TGTTTGTGTTTATTTTCTCC-ATTACTG-CATAATTTTTTTGTCATTGCAAGTTTGCT----GAGCGTCTSizeHit CountTotal NormTotal
No Reads
droKik1
TTGATCAGCAATCGATTGAC---------CCC---CGCCGCCATCCGCCGCAAGTGAGTACAGAG-A-AA-----GAGA------------------------------------TGGAAAGAACGAAAAAAGCGCCG---T------------ATTGTTTTTGTTGTTTTTTTGC-C-------AAACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTGATCAGCAATCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTAAGTAAGAGCGA-AA-----GCGAGGG-GCTA----AATCAG-GTGGGAGA----TAGGAGGAAAAGAGACGGAAGGCCGCCG------------------------------------------------AACACGTTGCAAAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTTCAATTGTGT--------------------------------------------------------------------T---TGTTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGTCCTCGCGAATTTTGT----------CASizeHit CountTotal NormTotal
No Reads
droEle1
TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCATCCGCTGCAAGTGAGTAAGAGCGA-GA-----GGGAGAA--CAA----A-T---------GTT------GGGCAGAAAGAGACAAAGAGCCGCCG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGACCTGGCA-----------CACAAAAAACGCACAC-----------------------------------------T---TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGCCCTTGCGAATTTTTTTTCTAC----ACSizeHit CountTotal NormTotal
No Reads
droRho1
TTGATCAGCAACCGATGGGC---------GCC---CGCCGCCATCCGCTGCAAGTGAGTAAGATAGG-GA-----GAGGGGGAGCTA----A-T----CCGGTGTGGCAATGGGGTAGAAAGAGACAAAAAGCCACTG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TACAGTTGCCGGTCGAAAT------------------------CGCATACG---------------------------------------TA---TATTTGTGTTTGTTTTCTCC-ATCACTG-CATAATTTGTTTGTCCTTGCGAATT----------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTGATCAGCAACCGATGGGC---------GCC---CGCCGCCCTCCGCTGCAAGTAAGTGAGAGAGA-GA-----GATGGGGTGATA----AAGCAG-GGAAAGTA------GG--GGAAAGGGACGGAAGGCCGCCG------------------------------------------------AACACGTTGCAAGT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAG-TGCCGGTCGAATTGCGC--------------------------------------------------------------------C---TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGTCCTTGCGAAT-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTGATCAGCAACCGATTGGC---------GCCCGTCGCCGCCCTCCGCTGCAAGTGAGTAGGGGCGA-AA-----GGGAGGGAGATA----GATCGG-GT-----------------AAAAGAGACGACAAATCGCTG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAATTGCGC--------------------------------------------------------------------T---TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGTCCTTGCGAATT----------------SizeHit CountTotal NormTotal
No Reads
droEug1
TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGTTGCAAGTGAGTAAGAGAGA-AA-----GAAACAGAGATTTTA-AAAC-G-------------------GAAAAGAGACAAAAAGCCGCTG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAATTGCACTTA----------------------------------------------------------------T----TATTTGTGTTTGTTTTCTCC-ATTACTG-CATAATTTGTTTGCCCTTGTAATCT--------------GTSizeHit CountTotal NormTotal
No Reads
dm3
TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GAGAGAGGGCTCCC---AGC-GGCCAGCGTG----CGTGCTGGAAAGAGACAGCAGGCCGACG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCAGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAGCTGCAGTGA----------------------------------------------------------------CA---CATTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTTGCGGGCTC---------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................AGTTGCCGGTCGAGCTGCAGT.............................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GATCAGCAACCGATTGGC---------GC......................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GTTGCCGGTCGAGCTGCAGTG............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000
..............ATTGGC---------GCC---CGCCGCCCTCCGCT....................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GTTGCCGGTCGAGCTGCAGT.............................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000
.............................................................................................................................................................................................................................................................T--TGCAGTTGCCGGTCGAGCTG.................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................AGTTGCCGGTCGAGCTGCAGTG............................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................................................AGCGGGA---CG---GAGAGAGGG.................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000
..........ACCGATTGGC---------GCC---CGCCGCCCTCC.......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CAGTGTCATTTGCCAAGG...........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CG---GAGAGAGGGCTCCC---AGC-GGCCAGC..............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTG----CGTGCTGGAAAGAGACAG.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................................................................................................................................................................................................................GTCAT--TGCAGTTGCCGGTCGAGC...................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GCTGCAAGTGAGTAAGCGGGA---C..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................A---CG---GAGAGAGGGCTCCC---AGC-GGCATC...............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATCAGCAACCGATTGGC---------GCC---..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................GTCAT--TGCAGTTGCCGGTCGAGCT..................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGTTGCCGGTCGAGCTGCA...............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAGCAACCGATTGGC---------GCC---CGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................T--TGCAGTTGCCGGTCGAG....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AAGCGGGA---CG---GAGAGAGGG.................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCCAAGGTCAT--TGCAGTTGCC...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................TCGAGCTGCAGTGA----------------------------------------------------------------CA---CATTTGTGT.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAACCGATTGGC---------GCC---CGCCGCCC..........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AT--TGCAGTTGCCGGTCGA.....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................TTTGCCAAGGTCAT--TGCAGTTGCCGGTATC.....................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGCCGCCCTCCGCTGCAA................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCCC---AGC-GGCCAGCGTG----CGTG...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..GATCAGCAACCGATTGGC---------GCC---CGC...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................CCC---AGC-GGCCAGCGTG----CGTGCTG................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TGCCGGTCGAGCTGCAGTGA----------------------------------------------------------------CA---CAT...................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TTGCAGAT-GCA---------------------------GCAGTGTCAT....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........AACCGATTGGC---------GCC---CGCCGC............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GACG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GAGGGCTCCC---AGC-GGCCAGCGTG----CG.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................CAAGGTCAT--TGCAGTTGCC...........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................AGTAAGCGGGA---CG---GAGAGAGGGC................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................TGGC---------GCC---CGCCGCCCTCCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AACCGATTGGC---------GCC---CGCCGCCCTC........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................G----CGTGCTGGAAAGAGACAGCA...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................CCAAGGTCAT--TGCAGTTGCC...........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................GCAGTTGCCGGTCGAGCTGCAG..............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................CGTG----CGTGCTGGAAAGAGACAG.....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.............................GCC---CGCCGCCCTCCGCTGC..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................AGTTGCCGGTCGAGCTGC................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............TTGGC---------GCC---CGCCGCCCTCCGCT....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCCAAGGTCAT--TGCAGTTGC............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCGATTGGC---------GCC---CGCCG.............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CCAAGGTCAT--TGCAGTTGCCGGTC.......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAACCGATTGGC---------GCC---CGC...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAACCGATTGGC---------GCC---CGCCGCCCTC........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCCAAGGTCAT--TGCAGTTGCCG..........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................GCAAGTGAGTAAGCGGGA---CG---..........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................AGCGGGA---CG---GAGAGAGGGCTCCC---AAT-C....................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AT--TGCAGTTGCCGGTCGAGCTT.................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................CGTGCTGGAAAGAGACAG.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTGATCAGCAACCGATTG...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
........................................................................................C---AGC-GGCCAGCGTG----CGTAA..................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droSim2
TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GAGAGACGGCTCCC---AGC-GGCCGGCGTG----CGTGCTTGAAAGAGACGGCAGGCTGCCG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAGCTGCAGTGA----------------------------------------------------------------CA---CATTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTTGCGGGCTCGTT----------CTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................GGCCGGCGTG----CGTGCT.................................................................................................................................................................................................................................................................................................................1612.00200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................TTTGTTTTCCCC-AGCACTG-.........................................1911.00110000000000000000
.............................................................................................................................CGGCAGGCTGCCG------------------------------------------------AACACGTTGCAGAT-G...........................................................................................................................................................................................................................2811.00101000000000000000
...ATCAGCAACCGATTGGC---------GCC---..................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................CATAATTTGTTTGTCCTTGCGGGCT................2511.00110000000000000000
....................................................................................................................................................................................................................................................................GTTGCCGGTCGAGCTGCA...............................................................................................................................................1811.00101000000000000000
..............................................................................................................CGTGCTTGAAAGAGAAC......................................................................................................................................................................................................................................................................................................17130.08100000000010000000
droSec2
TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GTAAGAGGGCTCCC---AGC-GGCCGGCGTG----CGTGCTGGAAAGAGACGGCAGGCCGCCG------------------------------------------------AACACGTTGCAGAT-GCA---------------------------GCAGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGAGCCGCAGTGA----------------------------------------------------------------CA---CATTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTTGCGGGCTCGTT----------CTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...ATCAGCAACCGATTGGC---------GC......................................................................................................................................................................................................................................................................................................................................................................................................1930.3310010
............................................................................................................................................................................................................................................GTCATTTGCCAAGGTCAT--TGC..................................................................................................................................................................2130.3311000
....................................................................................CTCCC---AGC-GGCCGGCGTG----.......................................................................................................................................................................................................................................................................................................................1830.3310001
........CAACCGATTGGC---------GCC---CGCCGCCCT.........................................................................................................................................................................................................................................................................................................................................................................................2430.3311000
..........................................................................................................................AGACGGCAGGCCGCCG------------------------------------------------AACA.......................................................................................................................................................................................................................................2030.3311000
TTGATCAGCAACCGATTGGC---------GCC---..................................................................................................................................................................................................................................................................................................................................................................................................2330.3310100
...........................................................AAGCGGGA---CG---GTAAGAGGGCTCC.............................................................................................................................................................................................................................................................................................................................................2330.3310100
......................................................................................................CGTG----CGTGCTGGAAAGAGAC.......................................................................................................................................................................................................................................................................................................2030.3311000
droYak3
TTGATCAGCAACCGATTGGC---------GCC---CGCCGCCCTCCGCTGCAAGTGAGTAAGCGGGA---CG---GAGCGAGTGCTCCCT--AGCCGGGCAGCGTG----C--GCTGGAAAGAGACGGCAGCACGCGG------------------------------------------------TACACGTTGCAAAT-GCA---------------------------GCAGTGTCATTTGCCAAGGTCAT--TCCAGTTGCCGGTCGCACTGCAGCGA----------------------------------------------------------------CA---CACTTGTGTTTGTTTTCCCC-AGCACTG-CATAATTTGTTTGTCCTCGCGGACTC---------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..GATCAGCAACCGATTGGC---------........................................................................................................................................................................................................................................................................................................................................................................................................1812.00201100000000
.......................................................................................................................................................................................................................................................................................................................................................................TTTGTTTTCCCC-AGCACTG-CATAATTTG................................2811.00101000000000
TTGATCAGCAACCGATTGGC---------GC......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....CAGCAACCGATTGGC---------GCC---CGCCGC............................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
.....CAGCAACCGATTGGC---------GCC---CGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..GATCAGCAACCGATTGGC---------GCC---..................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................AGCACGCGG------------------------------------------------TACACGTTGCAAAT-GCA---------------------------..............................................................................................................................................................................................2611.00101000000000
.....CAGCAACCGATTGGC---------GCC---..................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
....TCAGCAACCGATTGGC---------GCC---CGCCGCCC..........................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
TTGATCAGCAACCGATTGGC---------GCC---..................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEre2
TTGATCAGCAACCGATTGGC---------GCC---TGCCGCCCTCCGTTGCAAGTGAGTAAGCGGGA---CG---GAGCGAGCGCTCCC---AGCGGGCCAGCGTG----C--GCTGGAAAGAGACGGCAGGCCGGGG-----------------------------------------------GTACACGTTGCAGAT-GCA---------------------------GCGGTGTCATTTGCCAAGGTCAT--TGCAGTTGCCGGTCGCACTGCAGCGA----------------------------------------------------------------CA---CACTTGTGTTTGTTTTCACC-AGCACTG-CATAATTTG--------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..GATCAGCAACCGATTGGC---------........................................................................................................................................................................................................................................................................................................................................................................................................1812.0021100000
..............ATTGGC---------GCC---TGCCGCCCTCCGT.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.TGATCAGCAACCGATTGGC---------........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000

Generated: 05/18/2015 at 01:03 AM