ID:

dps_161

 Coordinate:

Unknown_singleton_2029:2542-2608 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.5 -23.1 -22.9

Flybase annnotation

ultra_scaffold [Unknown_singleton_2029]

Repeatable elements

NameClassFamilyStrand
Gypsy1-I_Dpse-intLTRGypsy+
mature
  1. Unknown_group_371:9288-9312 -
  2. Unknown_group_592:4312-4336 +
  3. XL_group1a:4221110-4221134 +
  4. dps_161  Unknown_singleton_2029:2543-2567 -
star
  1. Unknown_group_464:2965-2987 +
  2. 3:5718-5740 +
  3. Unknown_group_666:1243-1265 -
  4. Unknown_group_134:2253-2275 -
  5. XL_group1a:4221063-4221085 +
  6. Unknown_singleton_3162:682-704 -
  7. dps_161  Unknown_singleton_2029:2586-2608 -

Sense Strand Reads

TTGCAGCAACTCGTCGCTTTATCGGCTTGTCGTCCTTCAGAGTGATGGTATGCTCAGCTATGTGAGACACGCCCTCCAATCCCTTGGCCAATTCTTGCTTCAAAAACTCGGCTACCCACGGCGGGAGGGGCGGCTCGGTGATGGGGGCTGTCGGTGGCGGGATTTCT
***********************************....(((....(((.((((((......)))).)).))))))...((((((.(((.......(((..........))).......)))..)))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902010
ovaries
 GSM343916
embryo
 SRR902011
testis
 M062
head
 V112
male body		 GSM444067
head
 M022
male body
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACC................................................... 25 0 4 106.75 427 261 145 13 3 1 4 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCC.................................................. 26 0 4 84.00 336 225 107 1 1 0 2 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTAC.................................................... 24 0 4 63.50 254 207 27 12 1 6 0 0 1 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTA..................................................... 23 0 4 44.50 178 174 0 2 0 2 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCA................................................. 27 0 4 14.25 57 51 1 3 1 1 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTACC................................................... 24 0 4 6.25 25 25 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCT...................................................... 22 0 6 6.17 37 35 0 0 0 0 1 0 0 1
............................................................................................TCTTGCTTCAAAAACTCGGCTACCC.................................................. 25 0 4 5.75 23 23 0 0 0 0 0 0 0 0
...........................................................................................TGCTTGCTTCAAAAACTCGGCTACC................................................... 25 1 4 5.00 20 0 19 0 0 0 1 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTAC.................................................... 23 0 4 4.75 19 18 0 0 1 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGAC................................................................................................... 26 0 6 4.50 27 19 8 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGA.................................................................................................... 25 0 6 3.83 23 20 1 0 1 0 0 1 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAC................................................ 28 0 4 3.25 13 11 1 0 0 0 1 0 0 0
................................................TATGCTCAGCTATGTGAGACACGCCC............................................................................................. 26 0 7 2.43 17 14 3 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGACA.................................................................................................. 27 0 5 2.40 12 11 0 0 0 1 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAG..................................................................................................... 24 0 6 2.33 14 13 1 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGA...................................................................................................... 23 0 6 2.17 13 13 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCA.................................................. 26 1 5 2.00 10 9 1 0 0 0 0 0 0 0
...........................................................................................TGCTTGCTTCAAAAACTCGGCTACCC.................................................. 26 1 4 2.00 8 0 8 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACA................................................... 25 1 4 1.75 7 7 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTACCCA................................................. 26 0 4 1.50 6 6 0 0 0 0 0 0 0 0
..................................................TGCTCAGCTATGTGAGACACGCC.............................................................................................. 23 0 7 1.43 10 6 0 0 4 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCTTCAGAG............................................................................................................................. 27 0 6 1.33 8 8 0 0 0 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCTTC................................................................................................................................. 23 0 20 1.30 26 26 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTA..................................................... 22 0 4 1.25 5 5 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCACG............................................... 29 0 4 1.25 5 4 1 0 0 0 0 0 0 0
...........................................................................................TGCTTGCTTCAAAAACTCGGCTAC.................................................... 24 1 4 1.25 5 0 5 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGAA................................................................................................... 26 1 6 1.17 7 7 0 0 0 0 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCCACGGC............................................. 23 0 6 1.00 6 1 1 4 0 0 0 0 0 0
...........................................................................................TTATTGCTTCAAAAACTCGGCTACC................................................... 25 1 6 1.00 6 0 6 0 0 0 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCCACGGCG............................................ 24 0 6 1.00 6 5 0 1 0 0 0 0 0 0
................................TCCTTCAGAGTGATGGTATGCTCAGC............................................................................................................. 26 0 7 1.00 7 5 1 0 1 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGA.................................................................................................... 22 0 6 1.00 6 4 0 0 2 0 0 0 0 0
....................................................................................TGGCCAATTCTTGCTTCAAAAACTCGGC....................................................... 28 0 4 1.00 4 4 0 0 0 0 0 0 0 0
................................................TATGCTCAGCTATGTGAGACACGCC.............................................................................................. 25 0 7 0.86 6 5 1 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTG....................................................................................................... 22 0 7 0.86 6 5 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGC....................................................... 21 0 6 0.83 5 5 0 0 0 0 0 0 0 0
...........................................................................................TTCGTGCTTCAAAAACTCGGCTACC................................................... 25 1 4 0.75 3 0 3 0 0 0 0 0 0 0
...........................................................................................TTCCTGCTTCAAAAACTCGGCTACC................................................... 25 1 4 0.75 3 1 2 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAA................................................ 28 1 4 0.75 3 1 2 0 0 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCT................................................................................................................................... 21 0 20 0.70 14 14 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGG........................................................ 20 0 6 0.67 4 4 0 0 0 0 0 0 0 0
...........................................GATGGTATGCTCAGCTATGTGAGA.................................................................................................... 24 0 6 0.67 4 4 0 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGACA.................................................................................................. 24 0 5 0.60 3 3 0 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGACACGCC.............................................................................................. 28 0 5 0.60 3 1 2 0 0 0 0 0 0 0
................................................TATGCTCAGCTATGTGAGACACGC............................................................................................... 24 0 7 0.57 4 4 0 0 0 0 0 0 0 0
.............................................................................................CTTGCTTCAAAAACTCGGCTACCC.................................................. 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0
.............................................................................................CTTGCTTCAAAAACTCGGCTAC.................................................... 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTACA................................................... 24 1 4 0.50 2 2 0 0 0 0 0 0 0 0
..........................................................................................................TACGGCTACCCACGGCGTGAGGGGC.................................... 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCCAAAACTCGGCTACCC.................................................. 26 1 4 0.50 2 0 2 0 0 0 0 0 0 0
..................................................................................................TTCAAAAACTCGGCTACCC.................................................. 19 0 6 0.50 3 2 1 0 0 0 0 0 0 0
..............................................................................................TTGCTTCAAAAACTCGGCTACCC.................................................. 23 0 6 0.50 3 2 1 0 0 0 0 0 0 0
...............................................................................................................CTACCCACGGCGTGAGGGGCTG.................................. 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................................................ATTCTTGCTTCAAAAACTCGGCTACC................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0 0 0
..........................................................................................CTTCTTGCTTCAAAAACTCGGCTACC................................................... 26 1 4 0.50 2 1 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTAA.................................................... 24 1 4 0.50 2 2 0 0 0 0 0 0 0 0
...........................................GATGGTATGCTCAGCTATGTGAGAC................................................................................................... 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCCACGGCGG........................................... 25 0 6 0.50 3 2 0 0 1 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACAC.................................................. 26 1 4 0.50 2 0 2 0 0 0 0 0 0 0
...................................................................................TTGGCCAATTCTTGCTTCAAAAACTC.......................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0 0 0
..................................................TGCTCAGCTATGTGAGACACGC............................................................................................... 22 0 7 0.43 3 3 0 0 0 0 0 0 0 0
..................................................TGCTCAGCTATGTGAGACACGCCCT............................................................................................ 25 0 7 0.43 3 3 0 0 0 0 0 0 0 0
....................................TCAGAGTGATGGTATGCTCAGCTA........................................................................................................... 24 0 7 0.43 3 3 0 0 0 0 0 0 0 0
......................................................CAGCTATGTGAGACACGCCCTCC.......................................................................................... 23 0 7 0.43 3 3 0 0 0 0 0 0 0 0
.................................................ATGCTCAGCTATGTGAGACACGCC.............................................................................................. 24 0 7 0.43 3 2 1 0 0 0 0 0 0 0
................................TCCTTCAGAGTGATGGTATGCTCAG.............................................................................................................. 25 0 7 0.43 3 3 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGGTA..................................................................................................................... 23 0 7 0.43 3 2 0 0 1 0 0 0 0 0
..................................................TGCTCAGCTATGTGAGACACG................................................................................................ 21 0 7 0.43 3 3 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACCAT................................................. 23 2 7 0.43 3 0 0 3 0 0 0 0 0 0
...........................................................................................CTCTTGCTTCAAAAACTCGGCTACCC.................................................. 26 1 5 0.40 2 0 2 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGACACGC............................................................................................... 27 0 5 0.40 2 0 1 0 1 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGACAC................................................................................................. 25 0 5 0.40 2 2 0 0 0 0 0 0 0 0
................CTTTATCGGCTTGTCGTCCTT.................................................................................................................................. 21 0 20 0.40 8 8 0 0 0 0 0 0 0 0
.........................................ATGATGGTATGCTCAGCTATGTGAGACA.................................................................................................. 28 1 5 0.40 2 0 0 2 0 0 0 0 0 0
................................................TATGCTCAGCTATGTTTGACACACCCTC........................................................................................... 28 3 8 0.38 3 2 1 0 0 0 0 0 0 0
...........................................GATGGTATGCTCAGCTATGTGAG..................................................................................................... 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGC....................................................... 20 0 6 0.33 2 2 0 0 0 0 0 0 0 0
................................................................................................GCTTCAAAAACTCGGCTACCCACGG.............................................. 25 0 6 0.33 2 2 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACCC.................................................. 22 0 6 0.33 2 2 0 0 0 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCTTCAGA.............................................................................................................................. 26 0 6 0.33 2 2 0 0 0 0 0 0 0 0
..............................................................................................TTGCTTCAAAAACTCGGCTACCCA................................................. 24 0 6 0.33 2 2 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTA..................................................... 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGAA................................................................................................... 23 1 6 0.33 2 2 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACCCACGG.............................................. 26 0 6 0.33 2 2 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCT...................................................... 21 0 6 0.33 2 2 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAA..................................................................................................... 24 1 6 0.33 2 2 0 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGAC................................................................................................... 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TCGGCTACCCACGGCGGGAGG....................................... 21 0 20 0.30 6 6 0 0 0 0 0 0 0 0
.....................................CAGAGTGATGGTATGCTCAGCTATG......................................................................................................... 25 0 7 0.29 2 2 0 0 0 0 0 0 0 0
....................................TCAGAGTGATGGTATGCTCAGC............................................................................................................. 22 0 7 0.29 2 1 0 0 1 0 0 0 0 0
..................................................TGCTCAGCTATGTGAGACACGCCC............................................................................................. 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGCCCTCC.......................................................................................... 24 0 7 0.29 2 1 1 0 0 0 0 0 0 0
.............................TCGTCCTTCAGAGTGATGGTATGC.................................................................................................................. 24 0 7 0.29 2 0 0 2 0 0 0 0 0 0
.................................................ATGCTCAGCTATGTGAGACACG................................................................................................ 22 0 7 0.29 2 2 0 0 0 0 0 0 0 0
......................................................CAGCTATGTGAGACACGCCCTCCA......................................................................................... 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATG......................................................................................................... 20 0 7 0.29 2 2 0 0 0 0 0 0 0 0
...................TATCGGCTTGTCGTCCTTCAGAG............................................................................................................................. 23 0 7 0.29 2 2 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCCAAAACTCGGCTACC................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0
.......................................................................................GAAATTCTTGCTTCAAAAACTCGGCTAC.................................................... 28 2 4 0.25 1 1 0 0 0 0 0 0 0 0
.............................................................................................CTTGCTTCAAAAACTCGGCTACC................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0
................................................TATGCTCAGCTATGTGAGAC................................................................................................... 20 0 8 0.25 2 0 0 0 2 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAATTCGGCTACC................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................................................TGGCCAATTCTTGCTTCAAAAACTA.......................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................GTCTTGCTTCAAAAACTCGGCTACC................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0
.........................................................................................AATTCTTGCTTCAAAAACTCGGCTACCC.................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TCCTTGCTTCAAAAACTCGGCTACCC.................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCT.................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAACCTCGGCTAC.................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TGCTTGCTTCAAAAACTTGGCTACC................................................... 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0
...................................................................................TTGGCCAATTCTTGCTTCAAAAAC............................................................ 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTACCCACG............................................... 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.......................................................................................................AAACTCGGCTACCCACGGCGGGAGG....................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAATTCGGCTACCC.................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0
..........................................................................................CTTCTTGCTTCAAAAACTCGGCTACCCA................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCCTGCTTCAAAAACTCGGCTACCC.................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTCCAAAAACTCGGCTACC................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGTCTACC................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAAA............................................... 29 2 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGCCTGCTTCAAAAACTCGGCTACC................................................... 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0
...................................................................................TTGGCCAATTCTTGCTTCAAAAACT........................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCATGCTTCAAAAACTCGGCTACC................................................... 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0
...........................................................................................TTCTTGCTTCAAAAGCTCGGCTAC.................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...................................................................................TTGGCCAATTCTTGCTTCAAAAACTCG......................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0
....................................................................................TGGCCAATTCTTGCTTCAAAAACT........................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCC................................................. 27 1 4 0.25 1 0 0 0 0 0 0 1 0 0
...........................................................................................TGCTTGCTTCAAAAACTCGGCTACCCA................................................. 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCGA................................................. 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCTGCTACC................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTAG.................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAT................................................ 28 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...................................................................................TTGGCCAATTCTTGCTTCAAAAACTCGGC....................................................... 29 0 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................................................TGGCCAATTCTTGCTTCAAAAACTC.......................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCAA..................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGCTTGCCTCAAAAACTCGGCTACCC.................................................. 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGGTTCAAAAACTCGGCTACCC.................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGGTTCAAAAACTCGGCTACCCA................................................. 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGC............................................................................................... 19 0 9 0.22 2 2 0 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGCCCTC........................................................................................... 23 0 9 0.22 2 2 0 0 0 0 0 0 0 0
............................................................................................TCTTGCTTCAAAAACTCGGCTACCA.................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGCGAGACAC................................................................................................. 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACT................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.............................................TTGTATGCTCAGCTATGTGAGACACGC............................................................................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0
..............................................GGTATGCTCAGCTATGTGAGACACGA............................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCAA................................................. 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCCACCC.................................................. 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACCAC................................................. 27 2 5 0.20 1 1 0 0 0 0 0 0 0 0
............................................ATGGTATGCTCAGCTATGTGAGACA.................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGACAA................................................................................................. 28 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGAAA.................................................................................................. 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGACACG................................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCGGCTACAA.................................................. 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................TCCTTGCTTCAAAAACTCGGCT...................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................GATGGTATGCTCAGCTATGTGAA..................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0
................................................................................................GCTTCAAAAACTCGGCTACCC.................................................. 21 0 6 0.17 1 0 0 0 0 1 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCCACG............................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................GATGGTATGCTCAGCTATGTGAGAA................................................................................................... 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTATTGCTTCAAAAACGCGGCTACC................................................... 25 2 6 0.17 1 0 1 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGACT.................................................................................................. 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCTTCAGAA............................................................................................................................. 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTAATGCTTCAAAAACTCGGCTACC................................................... 25 2 6 0.17 1 0 1 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGT.................................................................................................... 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
............................................ATGGTATGCTCAGCTATGTGAGAC................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGAG................................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
..................................................................................................TTCAAAAACTCGGCTACCCAC................................................ 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCCACGG.............................................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTATTGCTTCAAAAACTCGGCTACCC.................................................. 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0
..........................................TTAGGGTATGCTCAGCTATGTGAGAC................................................................................................... 26 2 6 0.17 1 0 1 0 0 0 0 0 0 0
.............................................TGGTATGCTCAGCTATGTGAGT.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................TCGGTGATGGGGGCTGTCGGTG........... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.................................................................................................ATTCAAAAACTCGGCTACCCACGGCG............................................ 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................TCGGTGATGGGGGCTGTCGAA............ 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACCCACGGC............................................. 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTACGCTCAGCTATGTGAG..................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCCACGGCGGGA......................................... 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTC.......................................................... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................GATGGTATGCTCAGCTATGTGA...................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................................................................TCAAAAACTCGGCTACCC.................................................. 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0
............................................................................................TGCTTCTTCAAAAACTCGGCTACC................................................... 24 3 6 0.17 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................TCGGTGATGGGGGCTGTCGG............. 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAGAT................................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTATGTGAAAA................................................................................................... 26 2 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTATGATCAGCTATGTGAGAA................................................................................................... 26 2 6 0.17 1 1 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACC................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................TTATGTTATGCTCAGCTATGTGAGAC................................................................................................... 26 2 6 0.17 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTCTTGCTTCAAAAACTCG......................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................AAACTCGGCTACCCACGGCGGGA......................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACCCACGGCGG........................................... 29 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................TGGAATGCTCAGCTATGTGAGAT................................................................................................... 23 2 6 0.17 1 0 0 0 1 0 0 0 0 0
..........................................TTATGGTATGCTCAGCTATGTGAGAC................................................................................................... 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAAACTCGGCTACCCACG............................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................TCGGCTTGTCGTCCTTCAGAGTGATGG....................................................................................................................... 27 0 7 0.14 1 0 1 0 0 0 0 0 0 0
................................TCCTTCAGAGTGATGGTATGCTCAGT............................................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................TATGCTCAGCTATGTGAGACACG................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................TTTGAGACACGCCCTCCAATCCCT................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0 0 0 0
...................TATCGGCTTGTCGTCCTTCAGAGA............................................................................................................................ 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................TGCTCAGCTATGTGAGACACGCCA............................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.................................CCTTCAGAGTGATGGTATGCTCAGC............................................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................GCTCAGCTATGTGAGACACGCCC............................................................................................. 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................TGATGATATGCTCAGCTATGTT....................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGGTATGC.................................................................................................................. 26 0 7 0.14 1 0 0 0 0 0 0 1 0 0
..........................................TTACGGTATGCTCAGCTATGTG....................................................................................................... 22 2 7 0.14 1 0 1 0 0 0 0 0 0 0
..........................................................TATGTGAGACACGCCCTCCAATCCC.................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
....................ATCGGCTTGTCGTCCTTCAGAAA............................................................................................................................ 23 2 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................ATCCTTCAGAGTGATGGTATGCTCAGC............................................................................................................. 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................CTCGGTGATGGTGGATGT................ 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................................CTATGTGAGACACGCCCTCCAATCCC.................................................................................... 26 0 7 0.14 1 0 0 0 0 0 1 0 0 0
.................................................ATGCTCAGCTATGTGAGACACGCCC............................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................TATGCTCAGCTATGTGAGACACGAC.............................................................................................. 25 1 7 0.14 1 0 1 0 0 0 0 0 0 0
.........................................................CTATGTGAGACACGCCCTCCAATCC..................................................................................... 25 0 7 0.14 1 0 1 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGCCCTCCAA........................................................................................ 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGGTATG................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................TGATGGTATGCTCAGCTAA.......................................................................................................... 19 1 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................TGTGAGACACGCCCTCCAATCC..................................................................................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................TTCAGAGTGATGGTATGCTCAGCTA........................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGGTAT.................................................................................................................... 24 0 7 0.14 1 0 0 1 0 0 0 0 0 0
....................................TCAGAGTGATGGTATGCTCAGCTATG......................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................................................ATGTGAGACACGCCCTCCAATCCC.................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................TTCAGAGTGATGGTATGCTCAGC............................................................................................................. 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................................................AGGGGAGACACGCCCTCCAATCC..................................................................................... 23 2 7 0.14 1 0 1 0 0 0 0 0 0 0
................................................TATGCTCAGCTATGTGAGACACGCCA............................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
................................TCCTTCAGAGTGATGGTATGCTC................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................TCGGTGATGGGGGCTGTAAG............. 20 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................................................AAACTCGGCTACCCACGGC............................................. 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGGT...................................................................................................................... 22 0 7 0.14 1 0 0 0 0 0 0 0 1 0
.................................................................................................CTTCAAAAACTCGGCTACCA.................................................. 20 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGCCCTCCAATC...................................................................................... 28 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................TCGGCTTGTCGTCCTTCAGAGTGATGA....................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGGTATA................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................TCAGAGTGATGGTATGCA................................................................................................................. 18 1 7 0.14 1 0 0 0 1 0 0 0 0 0
....................................TCAGAGTGATGGTATGCTCAGCTATTA........................................................................................................ 27 2 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................................TATGTGAGACACGCCCTCCAATCCCT................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................TGTCCTTCAGAGTGATGGTATGCTCAGC............................................................................................................. 28 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................................TGCTTCAAAGACTCGGCTACCCACG............................................... 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................ATATGCTCAGCTATGTGAGACACGCC.............................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................TGTGAGACACGCCCTCCAATCCC.................................................................................... 23 0 7 0.14 1 0 1 0 0 0 0 0 0 0
.....................................CAGAGTGATGGTATGCTCAGCT............................................................................................................ 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................TGTCGTCCTTCAGAGTGATGG....................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................GAGTGATGGTATGCTCAGCTATG......................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................TGCTCAGCTATGTTTGACACACCCTC........................................................................................... 26 3 8 0.13 1 1 0 0 0 0 0 0 0 0
.....................................................GTAGCTATGTGAGACACGCCCTC........................................................................................... 23 2 9 0.11 1 1 0 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGA............................................................................................... 19 1 9 0.11 1 1 0 0 0 0 0 0 0 0
......................................................CAGCTATGTGAGACACGCCC............................................................................................. 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0
........................................................................................................AACTCGGCTACCCACGGCGGGAGG....................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..................TTATCGGCTTGTCGTCCTTCAAA.............................................................................................................................. 23 1 10 0.10 1 0 1 0 0 0 0 0 0 0
.....................................................TCAGCTATGTGAGACACGT............................................................................................... 19 1 10 0.10 1 1 0 0 0 0 0 0 0 0
................CTTTATCGGCTTGTCGTCCTTC................................................................................................................................. 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TCGGCTACCCACGGCGGGAGGGG..................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................TCGGCTTGTCGTCCTTCAG............................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................CAGCGTGATGGTATGGGCA............................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCTTCAC............................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............GCTTTATCGGCTTGTCGTCCTTCT................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................CGGCTACCCACGGCGGGAG........................................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AACGTCGTTGAGCAGCGAAATAGCCGAACAGCAGGAAGTCTCACTACCATACGAGTCGATACACTCTGTGCGGGAGGTTAGGGAACCGGTTAAGAACGAAGTTTTTGAGCCGATGGGTGCCGCCCTCCCCGCCGAGCCACTACCCCCGACAGCCACCGCCCTAAAGA
************************************....(((....(((.((((((......)))).)).))))))...((((((.(((.......(((..........))).......)))..)))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 SRR902010
ovaries
 M062
head
....TCGTTGAGCAGCGGGATA................................................................................................................................................. 18 2 1 29.00 29 29 0 0 0 0
...GTCGTTGAGCAGCGGGATA................................................................................................................................................. 19 2 1 22.00 22 18 4 0 0 0
..GGTCGTTGAGCAGCGGGATA................................................................................................................................................. 20 3 6 2.50 15 13 2 0 0 0
....TCGTTGAGCAGCGGGATAA................................................................................................................................................ 19 3 14 2.21 31 15 16 0 0 0
...GTCGTTGAGCAGCGGGATAA................................................................................................................................................ 20 3 5 1.40 7 6 1 0 0 0
..............................GCAGGAAGTCTCACTACCATACGAGT............................................................................................................... 26 0 7 0.57 4 3 0 1 0 0
................................................................................GGGAACCGGTTAAGAACGAAG.................................................................. 21 0 2 0.50 1 0 1 0 0 0
...........................ACAGCAGGAAGTCTCACTACCATAC................................................................................................................... 25 0 7 0.43 3 0 0 1 2 0
....TCGTTGAGCAGCGAGATAA................................................................................................................................................ 19 2 3 0.33 1 0 1 0 0 0
...................................................................................................AGTTTTTGAGCCGATGGGTGCCGC............................................ 24 0 6 0.33 2 0 0 2 0 0
.....CGTTGAGCAGCGGGATAA................................................................................................................................................ 18 3 20 0.30 6 6 0 0 0 0
..................................GAAGTCTCACTACCATACGAGTCGAT........................................................................................................... 26 0 7 0.29 2 1 1 0 0 0
.............................AGCAGGAAGTCTCACTACCATAC................................................................................................................... 23 0 7 0.29 2 2 0 0 0 0
............................CAGCAGGAAGTCTCACTACCATACGAGT............................................................................................................... 28 0 7 0.29 2 0 0 2 0 0
.............................AGCAGGAAGTCTCACTACCATACGAGT............................................................................................................... 27 0 7 0.29 2 2 0 0 0 0
...................................................CGAGTCGATACACTCTGTGCGGGAGGTT........................................................................................ 28 0 5 0.20 1 1 0 0 0 0
.........................................CACTACCATACGAGTCGATACACTCTGT.................................................................................................. 28 0 5 0.20 1 1 0 0 0 0
...............CGAAATAGCCGAACAGCAGGAAGTCT.............................................................................................................................. 26 0 6 0.17 1 0 0 1 0 0
............................CAGCAGGAAGTCTCACTACCATAC................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
........................................TCACTACCATACGAGTCGATACAC....................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
...............................AAAAAAGTCTCACTACCATACGAGT............................................................................................................... 25 3 7 0.14 1 0 0 1 0 0
................................................ATACGAGTCGATACACTCTGTG................................................................................................. 22 0 7 0.14 1 1 0 0 0 0
........................CGAACAGCAGGAAGTCTCACTACCATAC................................................................................................................... 28 0 7 0.14 1 0 0 0 1 0
................................AGGAAGTCTCACTACCATACG.................................................................................................................. 21 0 7 0.14 1 1 0 0 0 0
.....................AGCCGAACAGCAGGAAGTCTCACT.......................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
.................................GGAAGTCTCACTACCATACGAGTCGAT........................................................................................................... 27 0 7 0.14 1 1 0 0 0 0
................................AGGAAGTCTCACTACCATACGAGTCGAT........................................................................................................... 28 0 7 0.14 1 0 0 0 1 0
......................................TCTCACTACCATACGAGTCGAT........................................................................................................... 22 0 7 0.14 1 1 0 0 0 0
.....................AGCCGAACAGCAGGAAGTCTCACTAC........................................................................................................................ 26 0 7 0.14 1 0 0 0 1 0
........................................................CGATACACTCTGTGCGGGAGGTT........................................................................................ 23 0 7 0.14 1 1 0 0 0 0
..........................AACAGCAGGAAGTCTCACTACCATAC................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
.........................................CACTACCATACGAGTCGATACAC....................................................................................................... 23 0 7 0.14 1 1 0 0 0 0
...............................CAGGAAGTCTCACTACCATACGAGT............................................................................................................... 25 0 7 0.14 1 0 0 0 0 1
..............................GCAGGAAGTCTCACTACCATACG.................................................................................................................. 23 0 7 0.14 1 0 0 1 0 0
.............................AGCAGGAAGTCTCACTACCAT..................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
......................................................GTCGATACACTCTGTGCGGGAGGTT........................................................................................ 25 0 7 0.14 1 0 1 0 0 0
...........................ACAGCAGGAAGTCTCACTACCATACGAGT............................................................................................................... 29 0 7 0.14 1 1 0 0 0 0
.......................................................TCGATACACTCTGTGCGGGAGGTT........................................................................................ 24 0 7 0.14 1 1 0 0 0 0
..................................................................................GAACCGGTTAAGAACGAAG.................................................................. 19 0 20 0.10 2 2 0 0 0 0
........................................................................................................TTATGCCGATGGGTGCCGCACTCCCC..................................... 26 3 20 0.05 1 1 0 0 0 0
.........................................................................................................TAAGGGGATGGGTGCCGCC........................................... 19 3 20 0.05 1 1 0 0 0 0
........................CGAACAGCAGGAAGTC............................................................................................................................... 16 0 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_2029:2492-2658 - dps_161 TTG-CAGCAAC------TCG-------------------------TCGCTTTATCGGCTTGTCGTCCTTCAGAGTGATGGTATGCTCAGCTATGTG------AGACACGCCCTCCAATCCCTTGGCCAATTCTTGCTTCAAAAACTCGGCTACCCACGGCGGGA------------------------------GGGGCGGC---------TC-----------GGTGATGGGG-----------------------------------GCTGTCGGTGGCGGGATTT--CT
droPer2 scaffold_1208:772-953 - TTTGCACTGGCTGCGCCGCACGGCTGGGCGTGTCTGATTTGGCTC--------------------GCGTCTATCGTGTTATATTTTTAGCGCCGCC------GGGTCCGTCTCGTTGTCCTTGCATCGTT-----------------------------------------------------GCTGGGTC--TGGCGTGGTCGAGGCTTAGA-----------AGCGTTGTCCTTGTATTGCGGCTGGGTTC------TAGCGTGGTC------------GAGGCTTAGCT
droKik1 scf7180000301070:681-837 - TGC--TCGAGGTGAGGTGCTTGGCTGGTAGTCGAGTTCGGAGATT--------------------GGCTC-------------------------------------------------------------------------CCTTGGCTGCCCTCGATGGGTAGCTCCTTGGGCTGTCGTCGGTGGCTTCTCGGCGTGGGTGGAGTGTGACTCCGGTGCCGTGCTTCG---CTGATC-------------------------------------AGAGTGTGACTTTGAG
droEle1 scf7180000490623:9543-9575 + CGC-------------CGCACGGGTGGCTGGGCCTGGTTCGGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droRho1 scf7180000778811:497-570 + TTG-G-----------------------------------------------------------------------------------------------------------------------ATCGCC-----------------------------------------------------GATGAATC--AGGGGCGGGCAAAGCT--GT-----------GGTGATGTGGTCACGCTGCGGTTGTGCTC------GT--GGAGCC----------------------G
droTak1 scf7180000415751:522-688 - GATGTGGCTGCTGGAGCCCT-------------------------TGGCGTTGCCGGCGATGCGGCTT------------------CGGTAGCCCGTGGCGCTGATGTGGCTGCTGGAGCCCTTGGCGTTGCCGGCGATGCGGCTTCGGTAGCCCGTGGCG------------------------------------------------------------------------CTGATGTGGCTGCTGGAGCCCTTGGC----------GTTGCCGGCGATGCGGCTTCGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTG-CAGCAAC------TCG-------------------------TCGCTTTATCGGCTTGTCGTCCTTCAGAGTGATGGTATGCTCAGCTATGTG------AGACACGCCCTCCAATCCCTTGGCCAATTCTTGCTTCAAAAACTCGGCTACCCACGGCGGGA------------------------------GGGGCGGC---------TC-----------GGTGATGGGG-----------------------------------GCTGTCGGTGGCGGGATTT--CTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACC..........................................................................................................................................254106.75427026114543001310
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCC.........................................................................................................................................26484.0033602251072100100
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTAC...........................................................................................................................................24463.5025402072701101260
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTA............................................................................................................................................23444.50178017400000220
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCA........................................................................................................................................27414.255705110100310
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTACC..........................................................................................................................................2446.252502500000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCT.............................................................................................................................................2266.173713501000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTACCC.........................................................................................................................................2545.752302300000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTAC...........................................................................................................................................2344.751901800100000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGAC..........................................................................................................................................................................................2664.502701980000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGA...........................................................................................................................................................................................2563.832302010101000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAC.......................................................................................................................................2843.251301111000000
................................................................................TATGCTCAGCTATGTG------AGACACGCCC....................................................................................................................................................................................2672.431701430000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGACA.........................................................................................................................................................................................2752.401201100000010
..........................................................................TGATGGTATGCTCAGCTATGTG------AG............................................................................................................................................................................................2462.331401310000000
..........................................................................TGATGGTATGCTCAGCTATGTG------A.............................................................................................................................................................................................2362.171301300000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCA.........................................................................................................................................2652.00100910000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACA..........................................................................................................................................2541.7570700000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTACCCA........................................................................................................................................2641.5060600000000
..................................................................................TGCTCAGCTATGTG------AGACACGCC.....................................................................................................................................................................................2371.43100600400000
...............................................GCTTTATCGGCTTGTCGTCCTTCAGAG..........................................................................................................................................................................................................................2761.3380800000000
...............................................GCTTTATCGGCTTGTCGTCCTTC..............................................................................................................................................................................................................................23201.302602600000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTA............................................................................................................................................2241.2550500000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCACG......................................................................................................................................2941.2550410000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGAA..........................................................................................................................................................................................2661.1770700000000
.........................................................................................................................................TCAAAAACTCGGCTACCCACGGC....................................................................................................................................2361.0060110000400
.........................................................................................................................................TCAAAAACTCGGCTACCCACGGCG...................................................................................................................................2461.0060500000100
................................................................TCCTTCAGAGTGATGGTATGCTCAGC..........................................................................................................................................................................................................2671.0070510100000
.............................................................................TGGTATGCTCAGCTATGTG------AGA...........................................................................................................................................................................................2261.0060400200000
..........................................................................................................................TGGCCAATTCTTGCTTCAAAAACTCGGC..............................................................................................................................................2841.0040400000000
................................................................................TATGCTCAGCTATGTG------AGACACGCC.....................................................................................................................................................................................2570.8660510000000
..........................................................................TGATGGTATGCTCAGCTATGTG------..............................................................................................................................................................................................2270.8660510000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGC..............................................................................................................................................2160.8350500000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAA.......................................................................................................................................2840.7530120000000
...............................................GCTTTATCGGCTTGTCGTCCT................................................................................................................................................................................................................................21200.701401400000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGG...............................................................................................................................................2060.6740400000000
...........................................................................GATGGTATGCTCAGCTATGTG------AGA...........................................................................................................................................................................................2460.6740400000000
.............................................................................TGGTATGCTCAGCTATGTG------AGACA.........................................................................................................................................................................................2450.6030300000000
.............................................................................TGGTATGCTCAGCTATGTG------AGACACGCC.....................................................................................................................................................................................2850.6030120000000
................................................................................TATGCTCAGCTATGTG------AGACACGC......................................................................................................................................................................................2470.5740400000000
...................................................................................................................................CTTGCTTCAAAAACTCGGCTACCC.........................................................................................................................................2440.5020200000000
...................................................................................................................................CTTGCTTCAAAAACTCGGCTAC...........................................................................................................................................2240.5020200000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTACA..........................................................................................................................................2440.5020200000000
........................................................................................................................................TTCAAAAACTCGGCTACCC.........................................................................................................................................1960.5030210000000
....................................................................................................................................TTGCTTCAAAAACTCGGCTACCC.........................................................................................................................................2360.5030210000000
................................................................................................................................ATTCTTGCTTCAAAAACTCGGCTACC..........................................................................................................................................2640.5020200000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTAA...........................................................................................................................................2440.5020200000000
...........................................................................GATGGTATGCTCAGCTATGTG------AGAC..........................................................................................................................................................................................2560.5030300000000
.........................................................................................................................................TCAAAAACTCGGCTACCCACGGCGG..................................................................................................................................2560.5030200100000
.........................................................................................................................TTGGCCAATTCTTGCTTCAAAAACTC.................................................................................................................................................2640.5020200000000
..................................................................................TGCTCAGCTATGTG------AGACACGC......................................................................................................................................................................................2270.4330300000000
..................................................................................TGCTCAGCTATGTG------AGACACGCCCT...................................................................................................................................................................................2570.4330300000000
....................................................................TCAGAGTGATGGTATGCTCAGCTA........................................................................................................................................................................................................2470.4330300000000
......................................................................................CAGCTATGTG------AGACACGCCCTCC.................................................................................................................................................................................2370.4330300000000
.................................................................................ATGCTCAGCTATGTG------AGACACGCC.....................................................................................................................................................................................2470.4330210000000
................................................................TCCTTCAGAGTGATGGTATGCTCAG...........................................................................................................................................................................................................2570.4330300000000
...........................................................TGTCGTCCTTCAGAGTGATGGTA..................................................................................................................................................................................................................2370.4330200100000
..................................................................................TGCTCAGCTATGTG------AGACACG.......................................................................................................................................................................................2170.4330300000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACCAT........................................................................................................................................2370.4330000000300
.............................................................................TGGTATGCTCAGCTATGTG------AGACACGC......................................................................................................................................................................................2750.4020010100000
.............................................................................TGGTATGCTCAGCTATGTG------AGACAC........................................................................................................................................................................................2550.4020200000000
................................................CTTTATCGGCTTGTCGTCCTT...............................................................................................................................................................................................................................21200.4080800000000
...........................................................................GATGGTATGCTCAGCTATGTG------AG............................................................................................................................................................................................2360.3320200000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGC..............................................................................................................................................2060.3320200000000
......................................................................................................................................GCTTCAAAAACTCGGCTACCCACGG.....................................................................................................................................2560.3320200000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACCC.........................................................................................................................................2260.3320200000000
...............................................GCTTTATCGGCTTGTCGTCCTTCAGA...........................................................................................................................................................................................................................2660.3320200000000
....................................................................................................................................TTGCTTCAAAAACTCGGCTACCCA........................................................................................................................................2460.3320200000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTA............................................................................................................................................1960.3320200000000
.............................................................................TGGTATGCTCAGCTATGTG------AGAA..........................................................................................................................................................................................2360.3320200000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACCCACGG.....................................................................................................................................2660.3320200000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCT.............................................................................................................................................2160.3320200000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AA............................................................................................................................................................................................2460.3320200000000
.............................................................................TGGTATGCTCAGCTATGTG------AGAC..........................................................................................................................................................................................2360.3320200000000
.................................................................................................................................................TCGGCTACCCACGGCGGGA------------------------------GG................................................................................................21200.3060600000000
.....................................................................CAGAGTGATGGTATGCTCAGCTATG......................................................................................................................................................................................................2570.2920200000000
....................................................................TCAGAGTGATGGTATGCTCAGC..........................................................................................................................................................................................................2270.2920100100000
..................................................................................TGCTCAGCTATGTG------AGACACGCCC....................................................................................................................................................................................2470.2920200000000
.....................................................................................TCAGCTATGTG------AGACACGCCCTCC.................................................................................................................................................................................2470.2920110000000
.............................................................TCGTCCTTCAGAGTGATGGTATGC...............................................................................................................................................................................................................2470.2920000000200
.................................................................................ATGCTCAGCTATGTG------AGACACG.......................................................................................................................................................................................2270.2920200000000
......................................................................................CAGCTATGTG------AGACACGCCCTCCA................................................................................................................................................................................2470.2920200000000
..........................................................................TGATGGTATGCTCAGCTATG......................................................................................................................................................................................................2070.2920200000000
...................................................TATCGGCTTGTCGTCCTTCAGAG..........................................................................................................................................................................................................................2370.2920200000000
...................................................................................................................................CTTGCTTCAAAAACTCGGCTACC..........................................................................................................................................2340.2510100000000
................................................................................TATGCTCAGCTATGTG------AGAC..........................................................................................................................................................................................2080.2520000200000
..........................................................................................................................TGGCCAATTCTTGCTTCAAAAACTA.................................................................................................................................................2540.2510100000000
...............................................................................................................................AATTCTTGCTTCAAAAACTCGGCTACCC.........................................................................................................................................2840.2510100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCT.........................................................................................................................................2640.2510100000000
.........................................................................................................................TTGGCCAATTCTTGCTTCAAAAAC...................................................................................................................................................2440.2510100000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTACCCACG......................................................................................................................................2840.2510100000000
.............................................................................................................................................AAACTCGGCTACCCACGGCGGGA------------------------------GG................................................................................................2540.2510100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAAA......................................................................................................................................2940.2510100000000
.........................................................................................................................TTGGCCAATTCTTGCTTCAAAAACT..................................................................................................................................................2540.2510100000000
.........................................................................................................................TTGGCCAATTCTTGCTTCAAAAACTCG................................................................................................................................................2740.2510100000000
..........................................................................................................................TGGCCAATTCTTGCTTCAAAAACT..................................................................................................................................................2440.2510100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCC........................................................................................................................................2740.2510000001000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTAG...........................................................................................................................................2440.2510100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCCAT.......................................................................................................................................2840.2510010000000
.........................................................................................................................TTGGCCAATTCTTGCTTCAAAAACTCGGC..............................................................................................................................................2940.2510010000000
..........................................................................................................................TGGCCAATTCTTGCTTCAAAAACTC.................................................................................................................................................2540.2510100000000
.....................................................................................TCAGCTATGTG------AGACACGC......................................................................................................................................................................................1990.2220200000000
.....................................................................................TCAGCTATGTG------AGACACGCCCTC..................................................................................................................................................................................2390.2220200000000
..................................................................................................................................TCTTGCTTCAAAAACTCGGCTACCA.........................................................................................................................................2550.2010100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACT..........................................................................................................................................2550.2010100000000
..............................................................................GGTATGCTCAGCTATGTG------AGACACGA......................................................................................................................................................................................2650.2010100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACCAC........................................................................................................................................2750.2010100000000
............................................................................ATGGTATGCTCAGCTATGTG------AGACA.........................................................................................................................................................................................2550.2010100000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGACAA........................................................................................................................................................................................2850.2010000000100
.............................................................................TGGTATGCTCAGCTATGTG------AGACACG.......................................................................................................................................................................................2650.2010100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCGGCTACAA.........................................................................................................................................2650.2010100000000
...........................................................................GATGGTATGCTCAGCTATGTG------AA............................................................................................................................................................................................2360.1710100000000
......................................................................................................................................GCTTCAAAAACTCGGCTACCC.........................................................................................................................................2160.1710000000010
.........................................................................................................................................TCAAAAACTCGGCTACCCACG......................................................................................................................................2160.1710100000000
...........................................................................GATGGTATGCTCAGCTATGTG------AGAA..........................................................................................................................................................................................2560.1710100000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGACT.........................................................................................................................................................................................2760.1710100000000
...............................................GCTTTATCGGCTTGTCGTCCTTCAGAA..........................................................................................................................................................................................................................2760.1710100000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGT...........................................................................................................................................................................................2560.1710100000000
............................................................................ATGGTATGCTCAGCTATGTG------AGAC..........................................................................................................................................................................................2460.1710100000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGAG..........................................................................................................................................................................................2660.1710100000000
........................................................................................................................................TTCAAAAACTCGGCTACCCAC.......................................................................................................................................2160.1710100000000
.........................................................................................................................................TCAAAAACTCGGCTACCCACGG.....................................................................................................................................2260.1710100000000
.............................................................................TGGTATGCTCAGCTATGTG------AGT...........................................................................................................................................................................................2260.1710100000000
...................................................................................................................................................................................................................TC-----------GGTGATGGGG-----------------------------------GCTGTCGGTG.............2260.1710100000000
...................................................................................................................................................................................................................TC-----------GGTGATGGGG-----------------------------------GCTGTCGAA..............2160.1710100000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACCCACGGC....................................................................................................................................2760.1710100000000
.........................................................................................................................................TCAAAAACTCGGCTACCCACGGCGGGA------------------------------..................................................................................................2760.1710100000000
.................................................................................................................................TTCTTGCTTCAAAAACTC.................................................................................................................................................1860.1710100000000
...........................................................................GATGGTATGCTCAGCTATGTG------A.............................................................................................................................................................................................2260.1710100000000
.........................................................................................................................................TCAAAAACTCGGCTACCC.........................................................................................................................................1860.1710100000000
...................................................................................................................................................................................................................TC-----------GGTGATGGGG-----------------------------------GCTGTCGG...............2060.1710100000000
..........................................................................TGATGGTATGCTCAGCTATGTG------AGAT..........................................................................................................................................................................................2660.1710100000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACC..........................................................................................................................................2160.1710100000000
.................................................................................................................................TTCTTGCTTCAAAAACTCG................................................................................................................................................1960.1710100000000
.............................................................................................................................................AAACTCGGCTACCCACGGCGGGA------------------------------..................................................................................................2360.1710100000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACCCACGGCGG..................................................................................................................................2960.1710100000000
.....................................................................................................................................TGCTTCAAAAACTCGGCTACCCACG......................................................................................................................................2560.1710100000000
.....................................................TCGGCTTGTCGTCCTTCAGAGTGATGG....................................................................................................................................................................................................................2770.1410010000000
................................................................TCCTTCAGAGTGATGGTATGCTCAGT..........................................................................................................................................................................................................2670.1410100000000
................................................................................TATGCTCAGCTATGTG------AGACACG.......................................................................................................................................................................................2370.1410100000000
...................................................TATCGGCTTGTCGTCCTTCAGAGA.........................................................................................................................................................................................................................2470.1410100000000
..................................................................................TGCTCAGCTATGTG------AGACACGCCA....................................................................................................................................................................................2470.1410100000000
.................................................................CCTTCAGAGTGATGGTATGCTCAGC..........................................................................................................................................................................................................2570.1410100000000
...................................................................................GCTCAGCTATGTG------AGACACGCCC....................................................................................................................................................................................2370.1410100000000
...........................................................TGTCGTCCTTCAGAGTGATGGTATGC...............................................................................................................................................................................................................2670.1410000001000
..........................................................................................TATGTG------AGACACGCCCTCCAATCCC...........................................................................................................................................................................2570.1410100000000
....................................................ATCGGCTTGTCGTCCTTCAGAAA.........................................................................................................................................................................................................................2370.1410100000000
.........................................................................................CTATGTG------AGACACGCCCTCCAATCCC...........................................................................................................................................................................2670.1410001000000
.................................................................................ATGCTCAGCTATGTG------AGACACGCCC....................................................................................................................................................................................2570.1410100000000
.........................................................................................CTATGTG------AGACACGCCCTCCAATCC............................................................................................................................................................................2570.1410010000000
.....................................................................................TCAGCTATGTG------AGACACGCCCTCCAA...............................................................................................................................................................................2670.1410100000000
...........................................................TGTCGTCCTTCAGAGTGATGGTATG................................................................................................................................................................................................................2570.1410100000000
..........................................................................TGATGGTATGCTCAGCTAA.......................................................................................................................................................................................................1970.1410100000000
............................................................................................TGTG------AGACACGCCCTCCAATCC............................................................................................................................................................................2270.1410100000000
...................................................................TTCAGAGTGATGGTATGCTCAGCTA........................................................................................................................................................................................................2570.1410100000000
...........................................................TGTCGTCCTTCAGAGTGATGGTAT.................................................................................................................................................................................................................2470.1410000000100
....................................................................TCAGAGTGATGGTATGCTCAGCTATG......................................................................................................................................................................................................2670.1410100000000
...........................................................................................ATGTG------AGACACGCCCTCCAATCCC...........................................................................................................................................................................2470.1410100000000
...................................................................TTCAGAGTGATGGTATGCTCAGC..........................................................................................................................................................................................................2370.1410100000000
................................................................................TATGCTCAGCTATGTG------AGACACGCCA....................................................................................................................................................................................2670.1410100000000
................................................................TCCTTCAGAGTGATGGTATGCTC.............................................................................................................................................................................................................2370.1410100000000
.............................................................................................................................................AAACTCGGCTACCCACGGC....................................................................................................................................1970.1410100000000
...........................................................TGTCGTCCTTCAGAGTGATGGT...................................................................................................................................................................................................................2270.1410000010000
.......................................................................................................................................CTTCAAAAACTCGGCTACCA.........................................................................................................................................2070.1410100000000
.....................................................................................TCAGCTATGTG------AGACACGCCCTCCAATC.............................................................................................................................................................................2870.1410100000000
.....................................................TCGGCTTGTCGTCCTTCAGAGTGATGA....................................................................................................................................................................................................................2770.1410100000000
...........................................................TGTCGTCCTTCAGAGTGATGGTATA................................................................................................................................................................................................................2570.1410100000000
....................................................................TCAGAGTGATGGTATGCA..............................................................................................................................................................................................................1870.1410000100000
....................................................................TCAGAGTGATGGTATGCTCAGCTATTA.....................................................................................................................................................................................................2770.1410100000000
..........................................................................................TATGTG------AGACACGCCCTCCAATCCCT..........................................................................................................................................................................2670.1410100000000
............................................................................................TGTG------AGACACGCCCTCCAATCCC...........................................................................................................................................................................2370.1410010000000
.....................................................................CAGAGTGATGGTATGCTCAGCT.........................................................................................................................................................................................................2270.1410100000000
...........................................................TGTCGTCCTTCAGAGTGATGG....................................................................................................................................................................................................................2170.1410100000000
.......................................................................GAGTGATGGTATGCTCAGCTATG......................................................................................................................................................................................................2370.1410100000000
.....................................................................................TCAGCTATGTG------AGACACGA......................................................................................................................................................................................1990.1110100000000
......................................................................................CAGCTATGTG------AGACACGCCC....................................................................................................................................................................................2090.1110100000000
..............................................................................................................................................AACTCGGCTACCCACGGCGGGA------------------------------GG................................................................................................24200.1020200000000
.....................................................................................TCAGCTATGTG------AGACACGT......................................................................................................................................................................................19100.1010100000000
................................................CTTTATCGGCTTGTCGTCCTTC..............................................................................................................................................................................................................................22200.1020200000000
.................................................................................................................................................TCGGCTACCCACGGCGGGA------------------------------GGGG..............................................................................................23200.0510100000000
.....................................................TCGGCTTGTCGTCCTTCAG............................................................................................................................................................................................................................19200.0510100000000
...............................................GCTTTATCGGCTTGTCGTCCTTCAC............................................................................................................................................................................................................................25200.0510100000000
...............................................GCTTTATCGGCTTGTCGTCCTTCT.............................................................................................................................................................................................................................24200.0510100000000
..................................................................................................................................................CGGCTACCCACGGCGGGA------------------------------G.................................................................................................19200.0510100000000
droPer2
TTTGCACTGGCTGCGCCGCACGGCTGGGCGTGTCTGATTTGGCTC--------------------GCGTCTATCGTGTTATATTTTTAGCGCCGCC------GGGTCCGTCTCGTTGTCCTTGCATCGTT-----------------------------------------------------GCTGGGTC--TGGCGTGGTCGAGGCTTAGA-----------AGCGTTGTCCTTGTATTGCGGCTGGGTTC------TAGCGTGGTC------------GAGGCTTAGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTGGGTT........................................2312.002020000
...................................................................................................................TGTCCTTGCATCGTT-----------------------------------------------------GCTGGGTC--...................................................................................................2311.001010000
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTGGG..........................................21200.408080000
......................................................................................................................................................................................................TGGTCGAGGCTTAGA-----------AGCGTTGTC...........................................................24100.202020000
..............................................................................................................................................................................................C--TGGCGTGGTCGAGGCTTAGA-----------AGCGT...............................................................26100.101010000
......................................................................................................................................................................................................................................GTCCTTGTATTGCGGCTGGGT.........................................21200.102020000
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTGG...........................................20200.102000002
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTGGA..........................................21200.102001001
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTG............................................19200.102020000
.............................................................................................................................................................................................TC--TGGCGTGGTCGAGGCTTAGA-----------AGCGTA..............................................................28100.101010000
.............................................................................................................................................................................................TC--TGGCGTGGTCGAGGCTTAGA-----------A...................................................................23100.101010000
.................................................................................................................................T-----------------------------------------------------GCTGGGTC--TGGCGTGGTCGAGG.....................................................................................23120.081010000
..............................................................................TATATTTTTAGCGCCGCC------GGGTCCGTC.....................................................................................................................................................................................27150.071000001
..TGCACTGGCTGCGCCGCACGGCTGGG........................................................................................................................................................................................................................................................................26180.061010000
..TGCACTGGCTGCGCCGCACGGCT...........................................................................................................................................................................................................................................................................23180.061010000
.............................................................................................................................TCGTT-----------------------------------------------------GCTGGGTC--TGGCGTGGTC.........................................................................................23190.051000001
...................................................................................TTTTAGCGCCGCC------GGGTCCGTCTC...................................................................................................................................................................................24200.051010000
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTGGGT.........................................22200.051001000
.....................................................................................................................................................................................................................................TGTCCTTGTATTGCGGCTGGAA.........................................22200.051010000
...................................................................................TTTTAGCGCCGCC------GGGTCCGTCT....................................................................................................................................................................................23200.051010000
droKik1
TGC--TCGAGGTGAGGTGCTTGGCTGGTAGTCGAGTTCGGAGATT--------------------GGCTC-------------------------------------------------------------------------CCTTGGCTGCCCTCGATGGGTAGCTCCTTGGGCTGTCGTCGGTGGCTTCTCGGCGTGGGTGGAGTGTGACTCCGGTGCCGTGCTTCG---CTGATC-------------------------------------AGAGTGTGACTTTGAGSizeHit CountTotal NormTotal
No Reads
droEle1
CGC-------------CGCACGGGTGGCTGGGCCTGGTTCGGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droRho1
TTG-G-----------------------------------------------------------------------------------------------------------------------ATCGCC-----------------------------------------------------GATGAATC--AGGGGCGGGCAAAGCT--GT-----------GGTGATGTGGTCACGCTGCGGTTGTGCTC------GT--GGAGCC----------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
GATGTGGCTGCTGGAGCCCT-------------------------TGGCGTTGCCGGCGATGCGGCTT------------------CGGTAGCCCGTGGCGCTGATGTGGCTGCTGGAGCCCTTGGCGTTGCCGGCGATGCGGCTTCGGTAGCCCGTGGCG------------------------------------------------------------------------CTGATGTGGCTGCTGGAGCCCTTGGC----------GTTGCCGGCGATGCGGCTTCGGTSizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 02:54 PM