ID:

dps_1528

 Coordinate:

4_group3:3121117-3121267 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.9 -16.7 -16.5 -16.4

Flybase annnotation

exon [dpse_GLEANR_2403:1]; CDS [Dpse\GA25929-cds]; intron [Dpse\GA25929-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCGGGACCAATCGAGAACCTCAGTGCGACAGACAAAATCGCAAACAATGGTAAATAGCCTAAGAGTATCCCCAGGGAGGTGGAGGTGGGGGCGGCAGCTTTCTAACTGCTTTGGCGCATTGAACTTTTCCTCTGTGACGTCACATTGACGCCTGCATTTGTATATGTAACAAAGACAAGTCGCTTGCCATTGTTGTTGGCCGAGTTTACCTGCTCCCCGCCCACTTCCCCCGACCCTGATGTCAGTAAAG
******************************************************....................((.....((((((....(((.((((.........))..)).))).....))))))))************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902011
testis
 V112
male body		 GSM343916
embryo
..............................................................................................................TTTGGCGCATTGAACTTTTCC........................................................................................................................ 21 0 1 2.00 2 0 0 2 0 0
....................................................................................................TTCTAACTGCTTTGGCGCATT.................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
......................................................ATAGCCTAAGAGTATCCCCA................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................TGTTGGCCGAGTTTACCTGCT.................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................ACAAGTCGCTTGCCATTGTTG....................................................... 21 0 1 1.00 1 1 0 0 0 0
........................................................................AAGGGAGGTTGAGGTGGGGG............................................................................................................................................................... 20 2 1 1.00 1 0 0 0 1 0
.................ACCTCAGTGCGACAGACAAAATC................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
...GGGACCAATCGAGAACCTCAGTGC................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TGTGACGTCACATTGACGCC.................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.............................................................................AGGTGGAGGTGGGGGCGGCAG......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................TTTCTAACTGGTTTGGCGAATCG................................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0
..........ATCGAGAACCTCAGTGCGACA............................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
............................................................TAAGAGTGTCCCCAGGGAGGT.......................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.....GACCAATCGAGAACCTCAGTGC................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1
.................................................................................................................GGCGCATTGAACTTTTCCTCT..................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................................TCCCCAGGGAGGTGGAGGTG................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CAGATTGACGCCTGCATTTG.......................................................................................... 20 1 1 1.00 1 0 1 0 0 0
...............................................................................................................ATGGCGCATGGAACTTTTC......................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GAGTTTACCTGCTCCCCGC.............................. 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CCGCCCACTTCCCCCGACCCC............. 21 1 1 1.00 1 1 0 0 0 0
....GGACCAATCGAGAACCTCAGT.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................TGGCGCATTGAACTTTTCCTC...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................GTTGTTGGCCGAGTTTACCT....................................... 20 0 1 1.00 1 1 0 0 0 0
...........................................................CTAAGAGTATCCCCAGGGAGG........................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................GTGTTGTTGGCCGAGTTT........................................... 18 1 2 0.50 1 1 0 0 0 0
.........................................................................AGGGAAGTGGAGGTGGGGG............................................................................................................................................................... 19 1 3 0.33 1 1 0 0 0 0
........................................................................................................................TGCACGTTTCCTCTGTGACGCC............................................................................................................. 22 3 3 0.33 1 1 0 0 0 0
.................................................................................................................GGCGCATGGAACTTTTCGT....................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0
..............................................................................................................CATGGCGCATGGAACTTTTC......................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0
...............................................................................................................................................................................................TGTTGTTGGCCGAGTTAAA......................................... 19 2 5 0.20 1 1 0 0 0 0
...................................................................................................TTTCTAACTGGGTTGGCG...................................................................................................................................... 18 2 6 0.17 1 1 0 0 0 0
...............................................................................ATGGTGGTGGGGGCGGCGGCTTT..................................................................................................................................................... 23 3 8 0.13 1 1 0 0 0 0
.........................................................................AGGGAAGTAGAGGTGGGGG............................................................................................................................................................... 19 2 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................TGCCAGTGTGGTTAGCCGA............................................... 19 3 11 0.09 1 0 0 0 1 0
........................................................................CAGGGTGGTGGATGTGGGG................................................................................................................................................................ 19 2 14 0.07 1 1 0 0 0 0
.........................................................................AGGGAGGTGAAGGTGGGT................................................................................................................................................................ 18 2 15 0.07 1 0 0 0 1 0
.............................................................................GGGTGGAGGTGGGGGCGG............................................................................................................................................................ 18 1 19 0.05 1 1 0 0 0 0
..........................................................................GGAAGGTGGAGGTGGGGT............................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TCGCCCTGGTTAGCTCTTGGAGTCACGCTGTCTGTTTTAGCGTTTGTTACCATTTATCGGATTCTCATAGGGGTCCCTCCACCTCCACCCCCGCCGTCGAAAGATTGACGAAACCGCGTAACTTGAAAAGGAGACACTGCAGTGTAACTGCGGACGTAAACATATACATTGTTTCTGTTCAGCGAACGGTAACAACAACCGGCTCAAATGGACGAGGGGCGGGTGAAGGGGGCTGGGACTACAGTCATTTC
************************************************************************************************************************....................((.....((((((....(((.((((.........))..)).))).....))))))))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 GSM444067
head
 V112
male body
........................................................................................................................................................................................................................GGGCGGGTGAAGGGGGCTGGGAC............ 23 0 1 3.00 3 2 0 0 1
................TTGGAGTCACGCTGTCTGTT....................................................................................................................................................................................................................... 20 0 1 3.00 3 0 3 0 0
.......................................................................................................................................................................................................................GGGGCGGGTGAAGGGGGCTGGGAC............ 24 0 1 2.00 2 1 0 0 1
...................GAGTCACGCTGTCTGTTTTA.................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................GTAACAACAACCGGCTCAAAT.......................................... 21 0 1 1.00 1 1 0 0 0
...............CTTGGAGTCACGCTGTCTGTT....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................GGGGCGGGTGAAGGGGGC.................. 18 0 1 1.00 1 0 0 1 0
.....................................................................................................................................................................ACATTGTTTCTGTTCAGCGAA................................................................. 21 0 1 1.00 1 1 0 0 0
.................................................................................................CGAAAGATTGACGAAACCGCGT.................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
............................................................................................................CGAAACCGCGTAACTTGAAA........................................................................................................................... 20 0 1 1.00 1 1 0 0 0
............................TGTCTGTTTTAGCGTTTGTTA.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.CGCCCTGGTTAGCTCTTGGAG..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................GGGGCGGGTGAAGGGGGCTGGG.............. 22 0 1 1.00 1 1 0 0 0
.............................GTCTGTTTTAGCGTTTGTTAC......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...........AGCTCTTGGAGTCACGCTGTC........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................AGATTGACGAAACCGCGTAAC................................................................................................................................. 21 0 1 1.00 1 0 0 1 0
..........................................................................................................................................................................................................................GCGGGTGAAGGGGGCTGGGA............. 20 0 1 1.00 1 1 0 0 0
..........................GCTGTCTGTTTTAGCGTTT.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0
...................................................................................................................................................CTGCGGACGTAAACATATACA................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................AGGTTGGCGAGACCGCGTAAC................................................................................................................................. 21 3 1 1.00 1 0 0 1 0
.......................................................................................................................................................................................................................GGGGCGGGTGAAGGGGGCTGGGA............. 23 0 1 1.00 1 0 0 0 1
...............................................................................................................................................GTAACTGCGGACGTGAACATAT...................................................................................... 22 1 1 1.00 1 1 0 0 0
..........TAGCTCTTGGAGTCACGCTG............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................TACATTGTTTCTGTTCAGCGA.................................................................. 21 0 1 1.00 1 1 0 0 0
............................................................................................................................................AGTGTAACTGCGGACGTAAAC.......................................................................................... 21 0 1 1.00 1 1 0 0 0
..................GGAGTCACGCTGTCTGTTTTA.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...........................CTGCCTGTGTTAGCGTTTGTA........................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
....................................................................................................................................................................................................................CGAAGGGCGGATGAAGGG..................... 18 2 10 0.20 2 2 0 0 0
..................................................................................................................................................................................TCATCGAACGGGTACAACAA..................................................... 20 3 10 0.20 2 2 0 0 0
..............................................................................................................................................................................................................................GTGAAGCGGGCTTGGACTAG......... 20 3 8 0.13 1 1 0 0 0
............................................................................................................................................................................................................GAAATGTTCGAGGGGCGGGT........................... 20 3 10 0.10 1 0 0 1 0
............................................................ATTCTCATAGTGGTCCTTA............................................................................................................................................................................ 19 3 20 0.10 2 2 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group3:3121067-3121317 + dps_1528 AGCGGG------------ACCAATCGAGAACCTCAGTGCGA---CAGACAAAATC---GCAAACAATGGTAAATAGCCTAAGAGTATCCCCAGGGAGGTGGAGGTGGGG-GCGGCAGCT----TT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGCTTTGGCGCATTGAACTT--TT-----------------------CCTCTGTGACGTCACAT--TGACGCCTGCATTTGTATAT-GTAACAAAGACAAGTCGCTTGCCATTGTTGTTGGC---------------------------------------------------------------------------CGAGTT--TACCTGCTCCCCGCCCACTTCCCCCGACCCTGA-----------T-----------GTCAG----TAAAG-----
droPer2 scaffold_1:4603472-4603722 + dpe_561 AGCGGG------------ACCAATCGAGAACCTCAGTGCGA---CAGACAAAATC---GCAAACAATGGTAAATAGCCTAAGAGTATCCCCAGGGAGGTGGAGGTGGGG-GCGGCAGCT----TT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGCTTTGGCGCATTGAACTT--TT-----------------------CATCTGTGACGTCACAT--TGACGCCTGCATTTGTATAT-GTAACAAAGACAAGTCGCTTGCCATTGTTGTTGGC---------------------------------------------------------------------------CGAGTT--TACCTGCTCCCCGCCCACTTCCCCCGACCCTGA-----------T-----------GTCAG----TAAAG-----
droWil2 scf2_1100000004521:10184369-10184664 + AGCGCC------------CATTATTGAAAGCATAAACTCATCAACGGATAAAATT---ACTAACAATGGTAAAAGGAG-----------------TGGCGGGGGCGGGTTGCGG--GCTCATTG-AAC-----TTTCCCACTTACAT------G---------------------------CACACTTCCATACATACATATGTATATTTACAGTT---ATGTGTCTTGCGTTTGCATGTGCTTTGCCGCCCCCTA--------CTCT-CCCTCCCACCCTTATCCTATAA---------------------------------------------------TTG---TGT----------------------------GTAACAAAGAC-----AA---TTTTTGCCTTTACC------------------CTGCC----------------------------------------------------AGAGCTTTCACCTGGCCCCCGCCCCCTACATCTATTCTAAC-----------T-----------AACTA----CCTAA-----
droVir3 scaffold_13246:1624955-1625200 + dvi_21779 AGCGGC------------GCCAATTGAACAGCTAAATGCGG---CGGACAAAATAACAGCAAACAATGGTAAATATAA---------------------------------------AG----G-G-----------------A----------------GA-------TTCT---------ATATATGTACATATGCATGTT------TAGTGTTTGCCTGTGT-------------------------------GTGTGTGTGTGGGCGCCCTGGGGGTAGTTTAGCAAATG-TTGGGCACATTGAACTT--TT-----------------------GCATTGTGACGTCACGTGTCGCTACGTGCATATTAGAACCAAAGTAAAGACAACCGGCTAGCTA-------------------------------------------------------------------------------------------------------------------------------AACTG-------------------TTATT----GTTG-----
droMoj3 scaffold_6500:4291878-4291937 - AGCAGC------------ACCAATTGAGCATATAAATGTGG---CGGACAAAATAACGGCAAACAATGGTAAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:15609605-15609799 - AGCGGT------------GCCCATTGAGAATATTATTGCAG---CGGACAAAATATCAGCCAACAATGGTAAATATAA---------------------------------------AT----A-GGG--------GGAAGACACAT------A---------------------------CATATATGTATATACA--CGAA---------------CCTGTGA-------------------------------ATGTGTGTGTG---------GGGGTAGTTTAGCAAATG-TTAGGCGCATTGAACTT--TTACATTTGGCTGTTGCTGCTGTCGTCTTTGTGACGTCA-----------------------------CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:12958527-12958720 - GGCTGC------------TCCCGTGGAGAACATAAACTCGT---CGGACAAAATC---GCAAACAATGGTAAATAGCA---------------------------------------TT----G-CCC--------TC--------T------C---------------------------CCCCCTGTGAATTCCTGCTTCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACCC--TT-----------------------CCACTGTGACGTCA-----------------------------ACAAAGA--------GTGTTATTGTTGCTACCTGCTGGAAGAC-AAAGT------AG--ATAC-----GGCGA---------------------AAAGAAA---------------------------------------------------------------------GAGAAGT----GAAG-----
droBip1 scf7180000396580:566763-566938 + GGCGGC------------TCCCGTGGAGAACATCAATTCAT---CGGACAAAACT---GCAAACAATGGTAAATAGCC------------------------------------------------------------GACCCCACT------C---------------------------GCCCCCTCCACATTCCTACTCC--------------------------------------------------------------------------------------------CCACGTCCGTTGAACCC--TT-----------------------CCACTGTGACGTCA-----------------------------ACAAAGAA--------TGTTATTGTTGCTACCTGCTGGAACAT-AAAG--------TAGACAC---------------------------------------------------------------------------------------------------------------------GAAAA-----
droKik1 scf7180000302472:792107-792334 + AGCGAC------------GCCCGTGGAGAACCTCAAC---------------------GCAAACAATGGTAAATAGCA---------------------------------------G-------CCA--------GC--CCCAAATGTACCAACC----AA-------CCCG-AC-ACAACCCCCT-CCCAATCCCTACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGCA-----GCGTGTTATTGTTGCTACCTGCTGGCACGCAG-------------------CGAGCGACAGCAGGGAGGTGAGAGGTCAGCGG-----------------------------------------------------------------CCCAGAGGATGG--G----TAAATGGGGG
droFic1 scf7180000454015:320718-320936 + -------------------CCCGTCGAAGGTCTCAACCCCA---CGGACAAAATC---GCAAACAATGGTAAATAGAT---------------------------------------CC----C-CC-------------------T------TC-GGGAAAACCCAAACTC----------------TCCAACACACATACC--------------------------------------------------------------------------------CCCCATAAATA-CCACGTCCATTGAACTC--TTT-TTTTGTCT------------CCCCCTGTGACGTCA-----------------------------ACAAAGGA-----GCGTGTTATTGTTGCTACCTGCTGGCATGAAAGACT------AGAA--AA-----TAAGA---------------------GGGGAAA---------------------------------------------------------------------AGGGCAC----AAAG-----
droEle1 scf7180000491028:2677868-2678088 - GGCAGC---AGCTCCAACGCCCATCGAAGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CC----C-CC---------------------------------GAACCCAAACTCCCAAA-AAACCCCCCTCCGAAA-CCCACCGT--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------CCCCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGTTGGGG-AGACCAGTGTGAAAG-----------------------------GAAAGAGGGGA-----------------------------------------------------------------------AGG--G----TAAAA-----
droRho1 scf7180000780043:297332-297535 + GGCTGC---TGCTCCAACGCCCGTCGAAGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CC----C-CCA-----------ACCCAAAC-----------------------TCCCTT--TAACCCCTCGCCGAAC-CTCACCGC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------TCCCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGGAA-AGACC------AGAAA---------G------------------------------------------------------------------------------------------------------AAAG----AAAAG-----
droBia1 scf7180000302422:536001-536196 - AGC---------TCCAACACCCGTCGAAGACCCCAACCCCT---CGGACAAAGTC---GCAAACAATGGTAAATAGAG---------------------------------------CT----AGCTA--------AGCCCCTGAA------------------------------------CCCCTGCC-AGTCCACACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------CCCCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGCAG---AGCGCCT--AGAGG---------G----------------------------------------------------------------------------------------------------AGGGCGC---AACGG-----
droTak1 scf7180000415865:160392-160640 - AGCGGCGGCAGCTCCAACGCCCATCGAAGGTCTCAACCCCC---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----G-GGCCAAAAACCCC--------T------T-----------------CG-AA-AAAGCCCCCTGCCCAATCCACACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TTT-ATT------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGCAAAGGG--GTCT--AG-------CGAAAGAGA---------------------GGGGAAGCGGGAA-----------------------------------------GAGGGCCTAGCCAG------------CGG---AAGGG-----
droEug1 scf7180000409122:821655-821889 + AGCGGC---GGCTCCAACGCCCATTGAAGGTCTCAACCCCC---CGGATAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----A----------------GCGAAAT-----------------------CCCCTTG-TGACCCCCTTCCAAATCTCCACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTTTATT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGGAG-AA-----------AGACACGCGAAAGAAA---------------------GTAGA-GTAGGGA-----------------------------------------AAGGGTCATGCTGA------------CAT----AGGG-----
dm3 chr2L:12435368-12435576 + GGCGGA------TCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----TGCTA--------GCTACCTAAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CTTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTCGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AACAAT----GGGG-----
droSim2 2l:12091548-12091761 + dsi_24044 AGCGTCGGCGGCTCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----G-CTA--------GCTATCAAAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTCGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------GCCAGT----GGGG-----
droSec2 scaffold_16:625666-625879 + AGCGGCGGCGGCTCCAACGCCCATCGATGGTCTCAACCCCT---CGGATAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----G-CTA--------GCTACCTAAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTCGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------GCCAGT----GGGG-----
droYak3 2L:8871736-8871947 + GGCGGC------TCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------GT----G-CTA--------GCCAGCTAAAT------A---------------------------CCCCCTGCCAAATACACACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGCTATTGTTGCTACCTGATGGTCGCA-AGACCGCCGACAGAGACAC------------------------------------------------------------------------------------------------------------GAACGTGGGGAAAG-----
droEre2 scaffold_4929:12980881-12981098 - AGCGGCGGCGGCTCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----A-CTA--------GCCACCTAAAT------A---------------------------CCCCCTGCCAAATACACACGAC--------------------------------------------------------------------------------------------CCACGACCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGCTCGCT-AGACCGCTGACAGAGACTC------------------------------------------------------------------------------------------------------------GCGAGTGGGGAAAG-----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGCGGG------------ACCAATCGAGAACCTCAGTGCGA---CAGACAAAATC---GCAAACAATGGTAAATAGCCTAAGAGTATCCCCAGGGAGGTGGAGGTGGGG-GCGGCAGCT----TT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGCTTTGGCGCATTGAACTT--TT-----------------------CCTCTGTGACGTCACAT--TGACGCCTGCATTTGTATAT-GTAACAAAGACAAGTCGCTTGCCATTGTTGTTGGC---------------------------------------------------------------------------CGAGTT--TACCTGCTCCCCGCCCACTTCCCCCGACCCTGA-----------T-----------GTCAG----TAAAG-----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................TTTGGCGCATTGAACTT--TT-----------------------CC.......................................................................................................................................................................................................................................2112.0020000000020
...........................................................................................................................TT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGCTTTGGCGCATT..........................................................................................................................................................................................................................................................................2112.0020200000000
........................................................................ATAGCCTAAGAGTATCCCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGC---------------------------------------------------------------------------CGAGTT--TACCTGCT...................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACAAGTCGCTTGCCATTGTTG...................................................................................................................................................................2111.0010100000000
.............................ACCTCAGTGCGA---CAGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...GGG------------ACCAATCGAGAACCTCAGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................TGTGACGTCACAT--TGACGCC...............................................................................................................................................................................................................2011.0010100000000
...............................................................................................AGGTGGAGGTGGGG-GCGGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................ATCGAGAACCTCAGTGCGA---CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....G------------ACCAATCGAGAACCTCAGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
..........................................................................................................................................................................................................................................................................................................GGCGCATTGAACTT--TT-----------------------CCTCT....................................................................................................................................................................................................................................2111.0010100000000
......................................................................................TCCCCAGGGAGGTGGAGGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTT--TACCTGCTCCCCGC.............................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCCACTTCCCCCGACCCC............................................2111.0010100000000
....GG------------ACCAATCGAGAACCTCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................TGGCGCATTGAACTT--TT-----------------------CCTC.....................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGGC---------------------------------------------------------------------------CGAGTT--TACCT......................................................................2011.0010100000000
.............................................................................CTAAGAGTATCCCCAGGGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
AGCGGG------------ACCAATCGAGAACCTCAGTGCGA---CAGACAAAATC---GCAAACAATGGTAAATAGCCTAAGAGTATCCCCAGGGAGGTGGAGGTGGGG-GCGGCAGCT----TT------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTGCTTTGGCGCATTGAACTT--TT-----------------------CATCTGTGACGTCACAT--TGACGCCTGCATTTGTATAT-GTAACAAAGACAAGTCGCTTGCCATTGTTGTTGGC---------------------------------------------------------------------------CGAGTT--TACCTGCTCCCCGCCCACTTCCCCCGACCCTGA-----------T-----------GTCAG----TAAAG-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................TAACAAAGACAAGTCGCTTGC...........................................................................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................................................................................GAACTT--TT-----------------------CATCTGTGAC...............................................................................................................................................................................................................................1811.001100000
.....G------------ACCAATCGAGAACCTCAGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................CGAGAACCTCAGTGCGA---CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................CTCAGTGCGA---CAGACAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droWil2
AGCGCC------------CATTATTGAAAGCATAAACTCATCAACGGATAAAATT---ACTAACAATGGTAAAAGGAG-----------------TGGCGGGGGCGGGTTGCGG--GCTCATTG-AAC-----TTTCCCACTTACAT------G---------------------------CACACTTCCATACATACATATGTATATTTACAGTT---ATGTGTCTTGCGTTTGCATGTGCTTTGCCGCCCCCTA--------CTCT-CCCTCCCACCCTTATCCTATAA---------------------------------------------------TTG---TGT----------------------------GTAACAAAGAC-----AA---TTTTTGCCTTTACC------------------CTGCC----------------------------------------------------AGAGCTTTCACCTGGCCCCCGCCCCCTACATCTATTCTAAC-----------T-----------AACTA----CCTAA-----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................G-----------------TGGCGGGGGCGGGTTGCGG--GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300102
...............................................................................................TGGCGGGGGCGGGTTGCGG--GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................GAAAGCATAAACTCATCAACGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...........................AAGCATAAACTCATCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................................................................................................................................................................................................................................................TGCCGCCCCCTA--------CTCT-CCCT...........................................................................................................................................................................................................................................................................................................2011.00101000
.......................................................................................................................................................................................................................T---ATGTGTCTTGCGTTTGCAT..............................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
AGCGGC------------GCCAATTGAACAGCTAAATGCGG---CGGACAAAATAACAGCAAACAATGGTAAATATAA---------------------------------------AG----G-G-----------------A----------------GA-------TTCT---------ATATATGTACATATGCATGTT------TAGTGTTTGCCTGTGT-------------------------------GTGTGTGTGTGGGCGCCCTGGGGGTAGTTTAGCAAATG-TTGGGCACATTGAACTT--TT-----------------------GCATTGTGACGTCACGTGTCGCTACGTGCATATTAGAACCAAAGTAAAGACAACCGGCTAGCTA-------------------------------------------------------------------------------------------------------------------------------AACTG-------------------TTATT----GTTG-----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................T--TT-----------------------GCATTGTGACGTCACGTG.......................................................................................................................................................................................................................2113.003000000000000000000000010010000000000001000000000000000000000000
.....................AATTGAACAGCTAAATGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TT--TT-----------------------GCATTGTGACGTCACGT........................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGTTTAGCAAATG-TTGGGCA..............................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.............................AGCTAAATGCGG---CGGACAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....................AATTGAACAGCTAAATGCGG---CGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
..................GCCAATTGAACAGCTAAATGCGG---CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
...............................CTAAATGCGG---CGGACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGACGTCACGTGTCGCTACGT..............................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
..................GCCAATTGAACAGCTAAATGCGG---C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
......................................CGG---CGGACAAAATAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
.....C------------GCCAATTGAACAGCTAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000100000000000000000000000000000000000
.....................AATTGAACAGCTAAATGCGG---C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................AACAGCTAAATGCGG---CGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGTGGGCGCCCTGGGGGTAG.................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................TGT-------------------------------GTGTGTGTGTGGGCGC............................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................GT-------------------------------GTGTGTGTGTGGGCGC............................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000001000
droMoj3
AGCAGC------------ACCAATTGAGCATATAAATGTGG---CGGACAAAATAACGGCAAACAATGGTAAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGCGGT------------GCCCATTGAGAATATTATTGCAG---CGGACAAAATATCAGCCAACAATGGTAAATATAA---------------------------------------AT----A-GGG--------GGAAGACACAT------A---------------------------CATATATGTATATACA--CGAA---------------CCTGTGA-------------------------------ATGTGTGTGTG---------GGGGTAGTTTAGCAAATG-TTAGGCGCATTGAACTT--TTACATTTGGCTGTTGCTGCTGTCGTCTTTGTGACGTCA-----------------------------CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................CAG---CGGACAAAATATCAGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..................................ATTGCAG---CGGACAAAATATCAGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
...........................................................................................................................................................................................................................................................................................................................TACATTTGGCTGTTGCTGCTG............................................................................................................................................................................................................................................2111.00101
..................................ATTGCAG---CGGACAAAATATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...............................................................CAATGGTAAATATAA---------------------------------------AT----A-GGG--------....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
droAna3
GGCTGC------------TCCCGTGGAGAACATAAACTCGT---CGGACAAAATC---GCAAACAATGGTAAATAGCA---------------------------------------TT----G-CCC--------TC--------T------C---------------------------CCCCCTGTGAATTCCTGCTTCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACCC--TT-----------------------CCACTGTGACGTCA-----------------------------ACAAAGA--------GTGTTATTGTTGCTACCTGCTGGAAGAC-AAAGT------AG--ATAC-----GGCGA---------------------AAAGAAA---------------------------------------------------------------------GAGAAGT----GAAG-----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGTTGCTACCTGCTGGA.......................................................................................................................................................2111.001100000
........................................................................ATAGCA---------------------------------------TT----G-CCC--------TC--------T------C---------------------------CCCCC..................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................CTGCTTCC--------------------------------------------------------------------------------------------CCACGTCCATTGA........................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGCTACCTGCTGGAAGT....................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................CACGTCCATTGAACCC--TT-----------------------CCA......................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-----GGCGA---------------------AAAGAAA---------------------------------------------------------------------GAGAAG..............2111.001000010
..........................................................................................................................................................................................TGTGAATTCCTGCTTCC--------------------------------------------------------------------------------------------CCACG................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................A--------GTGTTATTGTTGCTACCTGC...........................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-----GGCGA---------------------AAAGAAA---------------------------------------------------------------------GAGA................1911.001000010
droBip1
GGCGGC------------TCCCGTGGAGAACATCAATTCAT---CGGACAAAACT---GCAAACAATGGTAAATAGCC------------------------------------------------------------GACCCCACT------C---------------------------GCCCCCTCCACATTCCTACTCC--------------------------------------------------------------------------------------------CCACGTCCGTTGAACCC--TT-----------------------CCACTGTGACGTCA-----------------------------ACAAAGAA--------TGTTATTGTTGCTACCTGCTGGAACAT-AAAG--------TAGACAC---------------------------------------------------------------------------------------------------------------------GAAAA-----SizeHit CountTotal NormTotal
No Reads
droKik1
AGCGAC------------GCCCGTGGAGAACCTCAAC---------------------GCAAACAATGGTAAATAGCA---------------------------------------G-------CCA--------GC--CCCAAATGTACCAACC----AA-------CCCG-AC-ACAACCCCCT-CCCAATCCCTACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGCA-----GCGTGTTATTGTTGCTACCTGCTGGCACGCAG-------------------CGAGCGACAGCAGGGAGGTGAGAGGTCAGCGG-----------------------------------------------------------------CCCAGAGGATGG--G----TAAATGGGGGSizeHit CountTotal NormTotal
No Reads
droFic1
-------------------CCCGTCGAAGGTCTCAACCCCA---CGGACAAAATC---GCAAACAATGGTAAATAGAT---------------------------------------CC----C-CC-------------------T------TC-GGGAAAACCCAAACTC----------------TCCAACACACATACC--------------------------------------------------------------------------------CCCCATAAATA-CCACGTCCATTGAACTC--TTT-TTTTGTCT------------CCCCCTGTGACGTCA-----------------------------ACAAAGGA-----GCGTGTTATTGTTGCTACCTGCTGGCATGAAAGACT------AGAA--AA-----TAAGA---------------------GGGGAAA---------------------------------------------------------------------AGGGCAC----AAAG-----SizeHit CountTotal NormTotal
No Reads
droEle1
GGCAGC---AGCTCCAACGCCCATCGAAGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CC----C-CC---------------------------------GAACCCAAACTCCCAAA-AAACCCCCCTCCGAAA-CCCACCGT--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------CCCCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGTTGGGG-AGACCAGTGTGAAAG-----------------------------GAAAGAGGGGA-----------------------------------------------------------------------AGG--G----TAAAA-----SizeHit CountTotal NormTotal
No Reads
droRho1
GGCTGC---TGCTCCAACGCCCGTCGAAGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CC----C-CCA-----------ACCCAAAC-----------------------TCCCTT--TAACCCCTCGCCGAAC-CTCACCGC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------TCCCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGGAA-AGACC------AGAAA---------G------------------------------------------------------------------------------------------------------AAAG----AAAAG-----SizeHit CountTotal NormTotal
No Reads
droBia1
AGC---------TCCAACACCCGTCGAAGACCCCAACCCCT---CGGACAAAGTC---GCAAACAATGGTAAATAGAG---------------------------------------CT----AGCTA--------AGCCCCTGAA------------------------------------CCCCTGCC-AGTCCACACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TT-----------------------CCCCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGCAG---AGCGCCT--AGAGG---------G----------------------------------------------------------------------------------------------------AGGGCGC---AACGG-----SizeHit CountTotal NormTotal
No Reads
droTak1
AGCGGCGGCAGCTCCAACGCCCATCGAAGGTCTCAACCCCC---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----G-GGCCAAAAACCCC--------T------T-----------------CG-AA-AAAGCCCCCTGCCCAATCCACACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC--TTT-ATT------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGCAAAGGG--GTCT--AG-------CGAAAGAGA---------------------GGGGAAGCGGGAA-----------------------------------------GAGGGCCTAGCCAG------------CGG---AAGGG-----SizeHit CountTotal NormTotal
No Reads
droEug1
AGCGGC---GGCTCCAACGCCCATTGAAGGTCTCAACCCCC---CGGATAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----A----------------GCGAAAT-----------------------CCCCTTG-TGACCCCCTTCCAAATCTCCACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTTTATT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTGGAG-AA-----------AGACACGCGAAAGAAA---------------------GTAGA-GTAGGGA-----------------------------------------AAGGGTCATGCTGA------------CAT----AGGG-----SizeHit CountTotal NormTotal
No Reads
dm3
GGCGGA------TCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----TGCTA--------GCTACCTAAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CTTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTCGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AACAAT----GGGG-----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................AACCCCT---CGGACAAAATC---GCAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................ACAATGGTAAATAGAG---------------------------------------CT----TGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000010
...............................................................CAATGGTAAATAGAG---------------------------------------CT----TGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010001000000000010000010000
.................................................................ATGGTAAATAGAG---------------------------------------CT----TGCTA--------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001101000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................AGAA-----GCGTGTTATTGTTGCTA................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................AACCCCT---CGGACAAAATC---GCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AACCCCT---CGGACAAAATC---GCAAACAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAAGAA-----GCGTGTTATTGTTGC..................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
...........................................................CAAACAATGGTAAATAGAG---------------------------------------CT----.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
..............................................................ACAATGGTAAATAGAG---------------------------------------CT----TGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAGAA-----GCGTGTTATTGTTGC..................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTCGCA-AGACCGTTGGC.......................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................GTGACGTCA-----------------------------ACAAAGAA-----GCGT.............................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................ACGTCCATTGAACTCGCTT-----------------------CT.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AACAAT----.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AACAATGGTAAATAGAG---------------------------------------CT----TG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
.............CCAACGCCCATCGATGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CGTCA-----------------------------ACAAAGAA-----GCGTGTTA.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGCA-AGACCGTTGGCAGAGAC.................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTTATTGTTGCTACCTGCTGG........................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACCCCT---CGGACAAAATC---GCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGCTACCTGCTGGTCGC....................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGCCCATCGATGGTCTCAACCCCT---C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGGTAAATAGAG---------------------------------------CT----TGCTA--------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CTTCTGTGACGTCA-----------------------------ACAAAGA.......................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................................................................TGGTAAATAGAG---------------------------------------CT----TGCTA--------GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ACTCGCTT-----------------------CTTCTGTGACGTC............................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000
......................................CCT---CGGACAAAATC---GCAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................CCCT---CGGACAAAATC---GCAAACAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GACAAAATC---GCAAACAATGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010
..................................AACCCCT---CGGACAAAATC---GCAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGCTA--------GCTACCTAAAT------A---------------------------CCCC...................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCT---CGGACAAAATC---GCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
...............................CTCAACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CAAAGAA-----GCGTGTTATTGTTG...................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....A------TCCAACGCCCATCGATGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GACAAAATC---GCAAACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GCTT-----------------------CTTCTGTGACGTCA-----------------------------ACA...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................CC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGT..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGCTACCTGCTGGTCGCA-A.................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................TCGATGGTCTCAACCCCT---CGGACAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCGGA------TCCAACGCCCATCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGACAC------------------------------------------------------------------------------------------------------------AACAAT----GGGG-----2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGGTCTCAACCCCT---CGGACAAAATC---GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CTGTGACGTCA-----------------------------ACAAAGAA-----GGC..............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGTCTCAACCCCT---CGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CCACGTCCATTGAACTCGCTT-----------------------.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............CCAACGCCCATCGATGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGGTCTCAACCCCT---CGGACAAAATC---GCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CTGTGACGTCA-----------------------------ACAAAGAA-----G................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..CGGA------TCCAACGCCCATCGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGGTCTCAACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGGTCTCAACCCCT---CGGACAAAATC---GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCA..................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGTCTCAACCCCT---CGGACAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGCTACCTGCTGGTCGCA-..................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................CTCAACCCCT---CGGACAAAATC---GCAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCA-AGACCGTTGGCAGAGA..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCATCGATGGTCTCAACCCCT---CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGCTGGTCGCA-AGACCGT...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....GA------TCCAACGCCCATCGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CATCGATGGTCTCAACCCCT---C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................AACAATGGTAAATAGAG---------------------------------------CT----T................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............CAACGCCCATCGATGGTCTCAACCCCT---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................TGCTA--------GCTACCTAAAT------A---------------------------CCCCC..................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCAACCCCT---CGGACAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................A-----GCGTGTTATTGTTGCTACCTG............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GA------TCCAACGCCCATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CT---CGGACAAAATC---GCAAACAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGGTAAATAGAG---------------------------------------CT----TGCTA--------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................T----TGCTA--------GCTACCTAAAT------A---------------------------CCC....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................ACAAAATC---GCAAACAATGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CT---CGGACAAAATC---GCAAACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CAATGGTAAATAGAG---------------------------------------CT----TGCTA--------....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGCTACCTGCTGGTCGCA-AGA...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGTTGCTACCTGCTGGT.......................................................................................................................................................2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCA..................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACT.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GGACAAAATC---GCAAACAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................TGGTAAATAGAG---------------------------------------CT----TGCTA--------GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................T---CGGACAAAATC---GCAAACAATGGTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AAACAATGGTAAATAGAG---------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................TGCCAAATACACATGCC--------------------------------------------------------------------------------------------C....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGGTAAATAGAG---------------------------------------CT----TGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCT---CGGACAAAATC---GCAAACAATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CTGTGACGTCA-----------------------------ACAAAGAA-----GC...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AACA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AAC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................ACGCCCATCGATGGTCTCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGGTAAATAGAG---------------------------------------CT----TGCTA--------....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................CTA--------GCTACCTAAAT------A---------------------------CCCCCT.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAAT------A---------------------------CCCCCTGCCAAATAC........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTCGCA-AGACCGTTGGCA......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................TCTCAACCCCT---CGGACAAAATC---GCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCGATGGTCTCAACCCCT---CGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CA-----------------------------ACAAAGAA-----GCGTGTTATTG......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AACTCGCTT-----------------------CTTCTGTGACGT.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................AACCCCT---CGGACAAAATC---GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................TCAACCCCT---CGGACAAAATC---G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAACCCCT---CGGACAAAATC---GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CCCT---CGGACAAAATC---GCAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACCCCT---CGGACAAAATC---GCAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGCCCATCGATGGTCTCAACCCCT---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................A-----------------------------ACAAAGAA-----GCGTGTTATTG......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................GTAAATAGAG---------------------------------------CT----TGCTA--------GCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................T---CGGACAAAATC---GCAAACAATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACCCCT---CGGACAAAATC---GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................AACCCCT---CGGACAAAATC---GCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTCGCA-AGACCGTTGGC.......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGTCGCA-AGACCGTTG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGCA-AGACCGTTGGCAGAGACC................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTCGCA-AGACCGTTGG........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-AGACCGTTGGCAGAGACA................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGTCTCAACCCCT---CGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GAA-----GCGTGTTATTGTTGCTAC...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGGTAAATAGAG---------------------------------------CT----TGCTA--------....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................ATCGATGGTCTCAACCCCT---CGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AACA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................TGGTCTCAACCCCT---CGGACAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCCATCGATGGTCTCAACCCCT---CGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................CTA--------GCTACCTAAAT------A---------------------------CCCCC..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------AAC................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGCTACCTGCTGGTCG.....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................AAATAGAG---------------------------------------CT----TGCTA--------GCTACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAACGCCCATCGATGGTCTCAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................CTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CC...................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................TCTCAACCCCT---CGGACAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTTATTGTTGCTACCTGCTG.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGGTAAATAGAG---------------------------------------CT----TCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
AGCGTCGGCGGCTCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----G-CTA--------GCTATCAAAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTCGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------GCCAGT----GGGG-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................AACAATGGTAAATAGAG---------------------------------------CT----G-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00310000000200000000
.................................CAACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300300000000000000
..................................AACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------G..................2412.00220000000000000000
...............................CTCAACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00211000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGCTACCTGCTGGTCGCA-..................................................................................................................................................2211.00100000000001000000
................................TCAACCCCT---CGGACAAAATC---G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................................................................................................................................................................................................................................................................................................CGTCCATTGAACTCGCTT-----------------------CCT......................................................................................................................................................................................................................................2111.00110000000000000000
..............................TCTCAACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................TT-----------------------CCTCTGTGACGTCA-----------------------------ACAA..........................................................................................................................................................................................2011.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------...................1911.00100000100000000000
.......................................................................................................................................................................................................TGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTC....................................................................................................................................................................................................................................................................2111.00110000000000000000
..............................................................ACAATGGTAAATAGAG---------------------------------------CT----G-CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................C--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGC..................................................................................................................................................................................................................................................................2011.00100000000001000000
....................CCATCGATGGTCTCAACCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
..............................TCTCAACCCCT---CGGACAAAATC---GCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................CTCGCTT-----------------------CCTCTGTGACGTC............................................................................................................................................................................................................................2011.00100000000010000000
droSec2
AGCGGCGGCGGCTCCAACGCCCATCGATGGTCTCAACCCCT---CGGATAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----G-CTA--------GCTACCTAAAT------A---------------------------CCCCCTGCCAAATACACATGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGGTCGCA-AGACCGTTGGCAGAGACAC------------------------------------------------------------------------------------------------------------GCCAGT----GGGG-----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............CCAACGCCCATCGATGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
............................................................AAACAATGGTAAATAGAG---------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................ATGGTAAATAGAG---------------------------------------CT----G-CTA--------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................GTGACGTCA-----------------------------ACAAAGAA-----GCGT.............................................................................................................................................................................2111.0010001
.....................................................................TAAATAGAG---------------------------------------CT----G-CTA--------GCTACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..........................ATGGTCTCAACCCCT---CGGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.......GCGGCTCCAACGCCCATCGATGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
....................................................................................................................................................................................................................................................................................................................ACTCGCTT-----------------------CCTCTGTGACGTC............................................................................................................................................................................................................................2111.0010100
...............................CTCAACCCCT---CGGATAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
............................................................................................................................................................................................................................................................................................................TCCATTGAACTCGCTT-----------------------CCTCTT...................................................................................................................................................................................................................................2211.0011000
................................................................AATGGTAAATAGAG---------------------------------------CT----G-CTA--------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................CTCAACCCCT---CGGATAAAATC---GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...........................TGGTCTCAACCCCT---CGGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.........GGCTCCAACGCCCATCGATGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
......................................................................AAATAGAG---------------------------------------CT----G-CTA--------GCTACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
droYak3
GGCGGC------TCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------GT----G-CTA--------GCCAGCTAAAT------A---------------------------CCCCCTGCCAAATACACACGCC--------------------------------------------------------------------------------------------CCACGTCCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGCTATTGTTGCTACCTGATGGTCGCA-AGACCGCCGACAGAGACAC------------------------------------------------------------------------------------------------------------GAACGTGGGGAAAG-----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACAC------------------------------------------------------------------------------------------------------------GAACGTGGGGAAAG-----2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................TGTGACGTCA-----------------------------ACAAAGAA-----GCG..............................................................................................................................................................................2111.00100000000010
.................................CAACCCCT---CGGACAAAATC---GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
AGCGGCGGCGGCTCCAACGCCCATCGATGGTCTCAACCCCT---CGGACAAAATC---GCAAACAATGGTAAATAGAG---------------------------------------CT----A-CTA--------GCCACCTAAAT------A---------------------------CCCCCTGCCAAATACACACGAC--------------------------------------------------------------------------------------------CCACGACCATTGAACTCGCTT-----------------------CCTCTGTGACGTCA-----------------------------ACAAAGAA-----GCGTGTTATTGTTGCTACCTGCTGCTCGCT-AGACCGCTGACAGAGACTC------------------------------------------------------------------------------------------------------------GCGAGTGGGGAAAG-----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................GCCCATCGATGGTCTCAACCCCT---C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
...............................CTCAACCCCT---CGGACAAAATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000

Generated: 05/18/2015 at 12:52 AM