ID:

dps_1523

 Coordinate:

4_group3:3038433-3038583 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.8 -14.7 -14.6

Flybase annnotation

CDS [Dpse\GA14721-cds]; exon [dpse_GLEANR_2060:4]; intron [Dpse\GA14721-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCGCCGCAAATGCGATTGCTGTCTCCACAGCCATCTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGCAACCATAGTCAATATAAATGAGCATACGGCGACAGACTCGGACACACGCTAAAAATATGACACAAAAAAAAAAAAACAAGAACAGTAGCGAACGGACTGAACACGGACTGACCTGTACAAAAAAGACAACTTACGAATCACTTACAAAAATAATTAACTTACATTTGAGATCCGACT
**************************************************((.(((((...(((((....((((.......(((........((.((.....))..))......)))....))))....)))))......................((((.........)))).....))))).))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 V112
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 SRR902010
ovaries
....................................................................................................................................................AACAAGAACAGTAGCGAACGGACTG.............................................................................. 25 0 1 2.00 2 2 0 0 0 0 0
......................................................................................................................................................................................................................................ACTTACATTTGAGATCCGAC. 20 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................GACTGAACACGGACTGACCT............................................................... 20 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................AGCGAACGGACTGAACACGGACT.................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
.........................................GCCCAGGAAGTGAGCTCTTAT............................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................CTGAACACGGACTGACCT............................................................... 18 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................TAGCGAACGGACTGAACACGGACTGACC................................................................ 28 0 1 1.00 1 0 0 0 1 0 0
....................................CAAAGGCCCTGGATGTGAGTTCGT............................................................................................................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................GTAGCGAACGGACTGAACAC......................................................................... 20 0 1 1.00 1 0 0 0 0 1 0
...................................TCTAAGGGCCGGGAAGTGAG.................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0 0
....................................................................................................................................GACACAAAAAAAAAAAAA..................................................................................................... 18 0 10 0.10 1 0 0 0 1 0 0
.................................TCTCAAAGGCTGAGAAAGTG...................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 1 0 0 0
...........................................................................................................................TAATACTTTGACACAAAAAAA........................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

GGCGGCGTTTACGCTAACGACAGAGGTGTCGGTAGAGTTTCCGGGTCCTTCACTCAAGAATAGTATCAATATCGTTGGTATCAGTTATATTTACTCGTATGCCGCTGTCTGAGCCTGTGTGCGATTTTTATACTGTGTTTTTTTTTTTTTGTTCTTGTCATCGCTTGCCTGACTTGTGCCTGACTGGACATGTTTTTTCTGTTGAATGCTTAGTGAATGTTTTTATTAATTGAATGTAAACTCTAGGCTGA
**************************************************((.(((((...(((((....((((.......(((........((.((.....))..))......)))....))))....)))))......................((((.........)))).....))))).))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 M059
embryo
 M040
female body
..................GACAGAGGTGTCGGTAGAGTTTCCGGGT............................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0
......................................................................................................................................GGGTTTTTTTTTGTTTGTTCTCGT............................................................................................. 24 3 17 0.06 1 0 1 0
....................................................................................................................GTTTGAGATCTTTATACTGT................................................................................................................... 20 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group3:3038383-3038633 - dps_1523 CCG------------------------CCGCAAATGCGATTGCTGTCTCCACAGCCATCTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGCAACCATAGTCAATATAAATGA--GCATACGGCGACAGACTCGG-----------ACACACGCTAAAAATATGACACAAAAAAA----------AAAAAACAAG-----------------------AACAGTAGC-----------------------------GAACGGACTGAA-CACGGACTG--ACCTGTACAAA-AAAGACAA--C----------TTAC--------------------G----A-ATCACTTA----------CA--AAAA---------------------------------------T--------------------------------A------------------------------------------------ATTAACTTACATTTGAGATCCGACT
droPer2 scaffold_1:4525384-4525633 - dpe_556 CCG------------------------CCGCAAATGCGATTGCTGTCTCCACAGCCATCTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGCAACCATAGTCAATATAAATGA--GCATACGGCGACAGACTCGG-----------ACACACGCTAAAAATATGACACAA-AAAA----------AAAAAACAAG-----------------------AACAGTAAC-----------------------------GAACGGACTGAA-CACGGACTG--ACCTGTACAAA-AAAGACAA--C----------TTAC--------------------G----A-ATCACTTA----------CA--AAAA---------------------------------------T--------------------------------A------------------------------------------------ATTAACTTACATTTGAGATCCGACT
droWil2 scf2_1100000004577:1088572-1088799 + dwi_1556 CGGCTGCGGCAGCTGCTGCTGCGGCTGCCGCCAATGCGATAGCCGTCTCATCAGCCATCTCCAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACGAA-----------------------------------------------AGAG----------AAAAGAGAAG-----------------------GAGACGAAA-----------------------------GGACAGAATGAAAGG-ACACGG--ACTTGGA--CA-AAACAAAA--C----------A------------------------------------AAA--CGAAAA-GA--AACA---------------------------------------A--------------------------------A------------------------------------------------AGAGATTTACGTTT-----CTGTTT
droVir3 scaffold_12963:10086875-10087152 + dvi_11197 CCG------------------------CCGCGAACGCAATCGCTGTCAGCACGGCCATCTCCAAGGCACAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACGCAGACGCA---------------------------------------------------------------------------------------------------------------------------------CAGACACCGACA----TGG--ACTTGTA--CA-AAAGACAAAAACACACAGACATTGC--------------------G----A-AACACTTG----------CA--AC-ATTTAATACACACACACACATAT------------------------ATATATATA----T----------ATATACATATATATATTTATATATATATATGCATAACAATTCAGATGCAGATCTA-CAAAA---TTAACTGAGACT
droMoj3 scaffold_6500:2765401-2765672 + CCG------------------------CTGCGAACGCAATCGCTGTGAGCACGGCCATCTCCAAGGCACAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGAGAGTAGACGAAGACGAAGACGC------AG---ACGCA--------------------------------------------CA----GACAC----------------------------------------------------------T--GACA----TGG--ACTTGTA--CA-AAAGACAA--ACACACAGACA-TGC-ACACACGTACGCCACTACATACAGA-AACAGTTG----------CA--AC-A---------------------------------------TAATTCTATATATATA----T----------ATAT---TATATATAG-TTCAGATAA---------A-------------GATCTG-CTAAGT--TTTACTGAGACT
droGri2 scaffold_15252:13221418-13221694 + CCG------------------------CTGCGAATGCAATCGCTGTGAGCACGGCGATCTCCAAGGCACAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA-AGCAGACGG--ACAGAC-----------------GCA--------------------------------------------CAAAACGACAC--------------------------------------------------------CAC--GACA----CGGACCCCTGTACAAA-AAAGACAT---------------GCCACACACG------------------------CTG----------CAC-AC-ACTCACTACACACACACACACAACAATATACAGTTAAAGCTAGTTGCATACATACG----TA-------AAAGAA---AAT----ATTTACAGATTTA--------A-------------C----AATTCAATTTTGAAACGAGACT
droAna3 scaffold_12916:7302205-7302462 + CGT------------------------CCGCAAACGCGATTGCCGTGTCTACAGCCATTTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACCGCGACAGAAACGACTTAA-AGACG-----------------------------------------------------------CTGACATGACTTTGA-------GATGCGAAAAGCAGCCAACA---AGAACTACTCTGACTGAAA-T----CGG--ACTTGTA--AA-AAAGACAA--T----------TTGC--------------------CC----AATTTCTAAA--CGAAAAAA---AAAC---------------------------------------AAAT----------------T-TAA----AAATAA---A-----ACACTG-------------------------------------------------CTCTGACT
droBip1 scf7180000396566:472841-473088 + CGT------------------------CCGCAAACGCGATTGCCGTTTCTACAGCCATTTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACCTGGACAGATACGATTTAA-A-------------------------------------------------------------------------------------GATGCAAACAGCAGCTGAC-----CCTTAACTATGACTGAAA-T----CGG--ACTTGTA--AAAAAAGACAA--T----------TTGC--------------------CC----AATTTCTAAT--CGAAAAAA---ATAG---------------------------------------AACT------------AACCT-TA--------------AAC---ACACTGC-------------------------------TCTGACTC-------AACTCCGATT
droKik1 scf7180000302472:8495-8713 + CTG------------------------CCGCTAACGCGCTTGCCGTCTCCACAGCCATCTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAATCATAGTCAATATAAATGA--GCACACCGGGACACA--CGACGG-----ACG--------------AA---------TAACAAACGAAAGAA--------G-----------------------G--AAAAAC-----------------------------GGACGGACTGA-ACG----CGA--ACTTGTA--TA-AAAGACAA--T----------TTCC--------------------GA-----A-----A--AA-------A--AAGAA---------------------------------------A--------------------------------------------------------------------------------ATGTAACTTACTTTTA---TTTGACT
droFic1 scf7180000454078:670838-671085 + -----------------------------GCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCGCGACGGAAACGACTTTC-GGACG-----------------------------------------------------------AAGATAAAA-------------CTG-------------TAC-----AAACCCAGCGGACTGAAACG----CCG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------AG----AA-----A--AAA---------AAGAA---------------------------------------AAAT----------------T--------AAATAA---AAG----ATTTGCACCTACA--------A-------------AACCTGACTCAAACTTAAACGTCGACT
droEle1 scf7180000490579:598185-598456 - GCA------------------------TGGCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCTATACTGAAGCGACTTTC-AGACG-----------------------------------------------------------CTGAAATGACT-----------TTGAAAAACAGGAATTAAC-----AAACTTAACGAACTGAAACG----CGG--ACGTGTA--A--AAAGACAA--T----------TTTC--------------------CC----AA-----A--A-CAAA-------AAAC---------------------------------------AAAT----------------T--------AAATAA---AATAAATATTTGCACTTAAA--------A-------------AACCTGACTCACATTAAAATGTTGACT
droRho1 scf7180000768553:63817-64081 + GCA------------------------TGGCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCTGTACGGAAACGACTTCT-AGACG-----------------------------------------------------------CAGACATGAC------------CTAAAAAACAGAATTTAAC-----AAACTTAACGGACTAAAACA----CGG--ACGTGTA--A--AAAGACAA--T----------TTTC--------------------TC----AA-----A--AAA-------------A---------------------------------------AAAT----------------AATAA----AAATTA---A-----TTATGGCACATACA--------A-------------AACCTGACTCACATTTAAATTTCGACT
droBia1 scf7180000301468:911758-912013 + GCA------------------------TGGCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGCGACGGAAACGACTTCCAA-------------------------------------------------------------------------------------CAGATAAACAGGAATTAAC----AAAACGCAACGGACTGAAACG----CGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC--AGCA-----A--ATA------------------------------------------------------AAT----------------TA-------AAATAA---AATATACAATTGCACATACA--------A-------------AACTTGACTCACATTTGAATTTTGACT
droTak1 scf7180000415914:482563-482827 + GCA------------------------TGGCTAACGCGATTGTCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAAAAACAGACCGCGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATAAACAGGAATTA-C-AACCAAACGCAACGGACTGAAACG----CGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----AA-----A--A-CAAAA---------A---------------------------------------AAAT----------------TATAC----AAATAA---AATATACAATTGCACATACA--------A-------------AACTTGACTCACATTTGAATTTCGACT
droEug1 scf7180000408961:318109-318353 + GCA------------------------TGGCTAATGCGATTGCTGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACATACAGCGACAGAAACGACTTAC-ATACG-----------------------------------------------------------A------GACA-----------TTGATAAACAGGAATTAAT-----AAACATAACGGACTGAAATG----CGG--ACGTGTA--AA-AAAGACAA--C----------TTCC--------------------TC----AA-----A--AAA-------------------------------------------------------AT-----------------------------------------TAATGCACATACA--------A-------------AACCTGACTTACATTTAAATTTTGACT
dm3 chr2L:16745063-16745311 + -----------------------------GCTAACTCGATTGTCGTCTCCGCAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGTGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACAGGAAATGAC-----AAGCACAACGGACTGAAACG----AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA---------AAGAA---------------------------------------AAAT----------------AATGAAAGA--------ATAAATGTAATTGCACATAAA-------AA-------------AACCTGACCC-------AATTTCGACT
droSim2 2l:16311878-16312126 + dsi_19960 -----------------------------GCTAACTCGATTGCCGTCTCCGCAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGGGACAGAAACGACACCC-A-------------------------------------------------------------------------------------CTGATTAACAGTAAATGAC-----AAGCACAACGGACTGAAACG----AGG--ACGTGTA--AAGAAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA---------AAGAA---------------------------------------ATAT----------------AATGAAAGA--------ATAAATGTAATTTCACACACA--------A-------------AACCTGACCC-------AATTTCGACT
droSec2 scaffold_7:391991-392240 + -----------------------------GCTAACTCGATTGCCGTCTCCGCAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGGGACAGTAACGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACCGTAAATGAC-----AAGCACAACGGACTGAAACG----AGG--ACGTGTA--AAGAAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA------A--AAGAA---------------------------------------ATAT----------------AATGAAAGA--------ATAAATGTAATTTCACATACA--------A-------------AACCTGACC-------GAATTTCGACT
droYak3 2R:4357395-4357621 - -----------------------------GCTAACTCGATTGTCGTCTCCGCAGCCATGTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGTGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATGAACAGGAAATAAC-----AAACACAACGGACTGAAACG----AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA-----------GAA---------------------------------------AC-----------------------------ATAA---ATTATGTAACTGCACATACG--------A-------------ATC------------------CAGACC
droEre2 scaffold_4845:19816747-19816973 + -----------------------------GCTAACTCCATTATCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCGCGACGGAATCGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACAGGAAATAAC-----AAACACAACGGACTGAAACG----AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----CA-----A--AACGAAAA-------------------------------------------------------------------------------ATAA---ATGATGTAATTGCACATACG--------A-------------AACCT------------------GACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CCG------------------------CCGCAAATGCGATTGCTGTCTCCACAGCCATCTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGCAACCATAGTCAATATAAATGA--GCATACGGCGACAGACTCGG-----------ACACACGCTAAAAATATGACACAAAAAAA----------AAAAAACAAG-----------------------AACAGTAGC-----------------------------GAACGGACTGAA-CACGGACTG--ACCTGTACAAA-AAAGACAA--C----------TTAC--------------------G----A-ATCACTTA----------CA--AAAA---------------------------------------T--------------------------------A------------------------------------------------ATTAACTTACATTTGAGATCCGACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................AACAAG-----------------------AACAGTAGC-----------------------------GAACGGACTG..........................................................................................................................................................................................................................................................2512.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTACATTTGAGATCCGAC.2011.0010000001000
...........................................................................................................................................................................................................................................................................GACTGAA-CACGGACTG--ACCT........................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................AGC-----------------------------GAACGGACTGAA-CACGGACT...............................................................................................................................................................................................................................................2311.0010000001000
.............................................................................................................................................................................................................................................................................CTGAA-CACGGACTG--ACCT........................................................................................................................................................................................................................................1811.0010000100000
.....................................................................................................................................................................................................................................TAGC-----------------------------GAACGGACTGAA-CACGGACTG--ACC.........................................................................................................................................................................................................................................2811.0010010000000
....................................................................................................................................................................................................................................GTAGC-----------------------------GAACGGACTGAA-CAC....................................................................................................................................................................................................................................................2011.0010000000001
.........................................................................................................................................................................GACACAAAAAAA----------AAAAAA.....................................................................................................................................................................................................................................................................................................................................18100.1010010000000
droPer2
CCG------------------------CCGCAAATGCGATTGCTGTCTCCACAGCCATCTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGCAACCATAGTCAATATAAATGA--GCATACGGCGACAGACTCGG-----------ACACACGCTAAAAATATGACACAA-AAAA----------AAAAAACAAG-----------------------AACAGTAAC-----------------------------GAACGGACTGAA-CACGGACTG--ACCTGTACAAA-AAAGACAA--C----------TTAC--------------------G----A-ATCACTTA----------CA--AAAA---------------------------------------T--------------------------------A------------------------------------------------ATTAACTTACATTTGAGATCCGACTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACATTTGAGATCCGAC.1817.007700000
..................................................................................................................................GACAGACTCGG-----------ACACACGCTAAAA.....................................................................................................................................................................................................................................................................................................................................................................2414.004400000
....................................................................................................................................................................................................................................GTAAC-----------------------------GAACGGACTGAA-CACGGACT...............................................................................................................................................................................................................................................2512.002200000
.................................................................................................................................................................................................AAAACAAG-----------------------AACAGTAAC-----------------------------GAACGGACT...........................................................................................................................................................................................................................................................2612.002200000
.......................................................................................................................................................................................................................................................................AACGGACTGAA-CACGGACTG--ACCT........................................................................................................................................................................................................................................2412.002200000
...................................................................................................................................................................................................................................AGTAAC-----------------------------GAACGGACTGAA-CA.....................................................................................................................................................................................................................................................2012.002200000
..................................................................................................................................................................................................AAACAAG-----------------------AACAGTAAC-----------------------------GAACGGACT...........................................................................................................................................................................................................................................................2512.002200000
...........................................................................................................................................................................................................................................................................GACTGAA-CACGGACTG--ACCTGT......................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................C-----------------------------GAACGGACTGAA-CACGGACTG--ACCT........................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................C-----------------------------GAACGGACTGAA-CACGGACT...............................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................AAC-----------------------------GAACGGACTGAA-CACGGACT...............................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................GGACTGAA-CACGGACTG--ACCTGTAC....................................................................................................................................................................................................................................2511.001001000
droWil2
CGGCTGCGGCAGCTGCTGCTGCGGCTGCCGCCAATGCGATAGCCGTCTCATCAGCCATCTCCAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACGAA-----------------------------------------------AGAG----------AAAAGAGAAG-----------------------GAGACGAAA-----------------------------GGACAGAATGAAAGG-ACACGG--ACTTGGA--CA-AAACAAAA--C----------A------------------------------------AAA--CGAAAA-GA--AACA---------------------------------------A--------------------------------A------------------------------------------------AGAGATTTACGTTT-----CTGTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................AATGA--GCAGACGAA-----------------------------------------------AGAG----------AAAAGA.....................................................................................................................................................................................................................................................................................................................................2412.00200020
......................................................................................................ATAGTCAATATAAATGA--GCAGA............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
............................................................................................................................................................................................................................................................................................................................................................................AAA-GA--AACA---------------------------------------A--------------------------------A------------------------------------------------AGAGATTTACGTT............2411.00100010
..............................................................AAGGCCCAGGAAGTGAGTTCTTATCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.............................................................................................................ATATAAATGA--GCAGACGAA-----------------------------------------------AGAG----------A..........................................................................................................................................................................................................................................................................................................................................2411.00100001
.................................................................................................................................................................................................................................................................................................................................................................................A--AACA---------------------------------------A--------------------------------A------------------------------------------------AGAGATTTACGTTT-----......2111.00100010
.................................................................................................................................................................................................AAGAGAAG-----------------------GAGACGAAA-----------------------------GGAC................................................................................................................................................................................................................................................................2111.00100100
...............................CAATGCGATAGCCGTCTCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................................................................................................................................................................................................................................................................................................GGA--CA-AAACAAAA--C----------A------------------------------------AAA--CGAAAA-GA--......................................................................................................................................................2611.00100010
..........AGCTGCTGCTGCGGCTGCCGCCAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................AGACGAA-----------------------------------------------AGAG----------AAAAGAGA...................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................GCAGACGAA-----------------------------------------------AGAG----------AAAAGAGA...................................................................................................................................................................................................................................................................................................................................2111.00100100
....................................CGATAGCCGTCTCATCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................GCAGACGAA-----------------------------------------------AGAG----------AAAAGAGAAG-----------------------..........................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................................................................................................ACACGG--ACTTGGA--CA-AAACAAAA--C----------A------------------------------------......................................................................................................................................................................2511.00101000
...............................................................AGGCCCAGGAAGTGAGTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
droVir3
CCG------------------------CCGCGAACGCAATCGCTGTCAGCACGGCCATCTCCAAGGCACAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACGCAGACGCA---------------------------------------------------------------------------------------------------------------------------------CAGACACCGACA----TGG--ACTTGTA--CA-AAAGACAAAAACACACAGACATTGC--------------------G----A-AACACTTG----------CA--AC-ATTTAATACACACACACACATAT------------------------ATATATATA----T----------ATATACATATATATATTTATATATATATATGCATAACAATTCAGATGCAGATCTA-CAAAA---TTAACTGAGACTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTCAGATGCAGATC.......................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................A--GCAGACGCAGACGCA---------------------------------------------------------------------------------------------------------------------------------CA...............................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CGCAGACGCA---------------------------------------------------------------------------------------------------------------------------------CAGACACCGACA----T................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGACACCGACA----TGG--ACTT........................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................G----A-AACACTTG----------CA--AC-ATTTAATACACA.......................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CAATATAAATGA--GCAGACGCAGAC.....................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
..................................CGCAATCGCTGTCAGCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
...................................................CGGCCATCTCCAAGGCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AACACACAGACATTGC--------------------G----A-A...........................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTA-CAAAA---TTAACTGAGACT2211.001000000000000001000000000000000000000000000000000000000000000000
..................................CGCAATCGCTGTCAGCACGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
............................................GTCAGCACGGCCATCTCCAAGGCACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATTCAGATGCAGATCT......................1911.001000000000000000000000000000000000001000000000000000000000000000
.......................................................CATCTCCAAGGCACAGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................CACAGGAAGTGAGTTCTTATCATAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000001000000000000000000000000000000000000000000000000000
................................................................GGCACAGGAAGTGAGTTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................ACAGACATTGC--------------------G----A-AACAC.......................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................G--ACTTGTA--CA-AAAGACAAAAACACAC................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CAGACACCGACA----TGG--AC..........................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CACACACACACATAT------------------------ATATATA.............................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CACACACACATAT------------------------ATATATAT............................................................................................21200.051000000000000000000010000000000000000000000000000000000000000000
droMoj3
CCG------------------------CTGCGAACGCAATCGCTGTGAGCACGGCCATCTCCAAGGCACAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGAGAGTAGACGAAGACGAAGACGC------AG---ACGCA--------------------------------------------CA----GACAC----------------------------------------------------------T--GACA----TGG--ACTTGTA--CA-AAAGACAA--ACACACAGACA-TGC-ACACACGTACGCCACTACATACAGA-AACAGTTG----------CA--AC-A---------------------------------------TAATTCTATATATATA----T----------ATAT---TATATATAG-TTCAGATAA---------A-------------GATCTG-CTAAGT--TTTACTGAGACTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................GCAATCGCTGTGAGCACGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100010
..............................................................................................................................................................................................................................................................................................................................................................AACAGTTG----------CA--AC-A---------------------------------------TAATTCT....................................................................................................2011.001100000
...................................................................ACAGGAAGTGAGTTCTTATCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTG-CTAAGT--TTTACTG.....1911.001100000
......................................................................................................................................................................................................................................................................................................................ACACAGACA-TGC-ACACACGTACGCCAC.......................................................................................................................................................................................2711.001100000
............................................................................GAGTTCTTATCATAGTTATAGAAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
..................................................................CACAGGAAGTGAGTTCTTATCATAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................AGTAGACGAAGACGAAGA................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
droGri2
CCG------------------------CTGCGAATGCAATCGCTGTGAGCACGGCGATCTCCAAGGCACAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA-AGCAGACGG--ACAGAC-----------------GCA--------------------------------------------CAAAACGACAC--------------------------------------------------------CAC--GACA----CGGACCCCTGTACAAA-AAAGACAT---------------GCCACACACG------------------------CTG----------CAC-AC-ACTCACTACACACACACACACAACAATATACAGTTAAAGCTAGTTGCATACATACG----TA-------AAAGAA---AAT----ATTTACAGATTTA--------A-------------C----AATTCAATTTTGAAACGAGACTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................ACAC--------------------------------------------------------CAC--GACA----CGGACCCCTGTACAAA-................................................................................................................................................................................................................................2711.00110
droAna3
CGT------------------------CCGCAAACGCGATTGCCGTGTCTACAGCCATTTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACCGCGACAGAAACGACTTAA-AGACG-----------------------------------------------------------CTGACATGACTTTGA-------GATGCGAAAAGCAGCCAACA---AGAACTACTCTGACTGAAA-T----CGG--ACTTGTA--AA-AAAGACAA--T----------TTGC--------------------CC----AATTTCTAAA--CGAAAAAA---AAAC---------------------------------------AAAT----------------T-TAA----AAATAA---A-----ACACTG-------------------------------------------------CTCTGACTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................GAAGGCCCAGGAAGTGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAA---A-----ACACTG-------------------------------------------------CTCTGACT1911.001100000
.............................................................................................................................................................................................................................TTTGA-------GATGCGAAAAGCAGCC.................................................................................................................................................................................................................................................................................2111.001010000
..............................................GTCTACAGCCATTTCGAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.GT------------------------CCGCAAACGCGATTGCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............................................................................AGTTCTTATCATAGTTATAGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.................................................................................CTTATCATAGTTATAGAAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................ATGACTTTGA-------GATGCGAAAAGC.....................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................AGTTATAGAAACCATAGTCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................GAAACCATAGTCAATATAAATGA--GC...............................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................CATGACTTTGA-------GATGCGAAAAGC.....................................................................................................................................................................................................................................................................................2311.001010000
.......................................................CATTTCGAAGGCCCAGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
droBip1
CGT------------------------CCGCAAACGCGATTGCCGTTTCTACAGCCATTTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--GCAGACCTGGACAGATACGATTTAA-A-------------------------------------------------------------------------------------GATGCAAACAGCAGCTGAC-----CCTTAACTATGACTGAAA-T----CGG--ACTTGTA--AAAAAAGACAA--T----------TTGC--------------------CC----AATTTCTAAT--CGAAAAAA---ATAG---------------------------------------AACT------------AACCT-TA--------------AAC---ACACTGC-------------------------------TCTGACTC-------AACTCCGATTSizeHit CountTotal NormTotal
No Reads
droKik1
CTG------------------------CCGCTAACGCGCTTGCCGTCTCCACAGCCATCTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAATCATAGTCAATATAAATGA--GCACACCGGGACACA--CGACGG-----ACG--------------AA---------TAACAAACGAAAGAA--------G-----------------------G--AAAAAC-----------------------------GGACGGACTGA-ACG----CGA--ACTTGTA--TA-AAAGACAA--T----------TTCC--------------------GA-----A-----A--AA-------A--AAGAA---------------------------------------A--------------------------------------------------------------------------------ATGTAACTTACTTTTA---TTTGACTSizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------GCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCGCGACGGAAACGACTTTC-GGACG-----------------------------------------------------------AAGATAAAA-------------CTG-------------TAC-----AAACCCAGCGGACTGAAACG----CCG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------AG----AA-----A--AAA---------AAGAA---------------------------------------AAAT----------------T--------AAATAA---AAG----ATTTGCACCTACA--------A-------------AACCTGACTCAAACTTAAACGTCGACTSizeHit CountTotal NormTotal
No Reads
droEle1
GCA------------------------TGGCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCTATACTGAAGCGACTTTC-AGACG-----------------------------------------------------------CTGAAATGACT-----------TTGAAAAACAGGAATTAAC-----AAACTTAACGAACTGAAACG----CGG--ACGTGTA--A--AAAGACAA--T----------TTTC--------------------CC----AA-----A--A-CAAA-------AAAC---------------------------------------AAAT----------------T--------AAATAA---AATAAATATTTGCACTTAAA--------A-------------AACCTGACTCACATTAAAATGTTGACTSizeHit CountTotal NormTotal
No Reads
droRho1
GCA------------------------TGGCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCTGTACGGAAACGACTTCT-AGACG-----------------------------------------------------------CAGACATGAC------------CTAAAAAACAGAATTTAAC-----AAACTTAACGGACTAAAACA----CGG--ACGTGTA--A--AAAGACAA--T----------TTTC--------------------TC----AA-----A--AAA-------------A---------------------------------------AAAT----------------AATAA----AAATTA---A-----TTATGGCACATACA--------A-------------AACCTGACTCACATTTAAATTTCGACTSizeHit CountTotal NormTotal
No Reads
droBia1
GCA------------------------TGGCTAACGCGATTGCCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGCGACGGAAACGACTTCCAA-------------------------------------------------------------------------------------CAGATAAACAGGAATTAAC----AAAACGCAACGGACTGAAACG----CGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC--AGCA-----A--ATA------------------------------------------------------AAT----------------TA-------AAATAA---AATATACAATTGCACATACA--------A-------------AACTTGACTCACATTTGAATTTTGACTSizeHit CountTotal NormTotal
No Reads
droTak1
GCA------------------------TGGCTAACGCGATTGTCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAAAAACAGACCGCGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATAAACAGGAATTA-C-AACCAAACGCAACGGACTGAAACG----CGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----AA-----A--A-CAAAA---------A---------------------------------------AAAT----------------TATAC----AAATAA---AATATACAATTGCACATACA--------A-------------AACTTGACTCACATTTGAATTTCGACTSizeHit CountTotal NormTotal
No Reads
droEug1
GCA------------------------TGGCTAATGCGATTGCTGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACATACAGCGACAGAAACGACTTAC-ATACG-----------------------------------------------------------A------GACA-----------TTGATAAACAGGAATTAAT-----AAACATAACGGACTGAAATG----CGG--ACGTGTA--AA-AAAGACAA--C----------TTCC--------------------TC----AA-----A--AAA-------------------------------------------------------AT-----------------------------------------TAATGCACATACA--------A-------------AACCTGACTTACATTTAAATTTTGACTSizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------GCTAACTCGATTGTCGTCTCCGCAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGTGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACAGGAAATGAC-----AAGCACAACGGACTGAAACG----AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA---------AAGAA---------------------------------------AAAT----------------AATGAAAGA--------ATAAATGTAATTGCACATAAA-------AA-------------AACCTGACCC-------AATTTCGACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................AACG----AGG--ACGTGTA--AA-AAAGACAA--T----------T..........................................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................C-----AAGCACAACGGACTGAAACG----AGG--............................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TAA--ACAGACCGTGACGGAAACGACT...........................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
..........................................................................................................................................CGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACAGGAAATGAC-----A........................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATTAA.........................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------...................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGTCGAAGGCCCAGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000002000000000000000000000000
...........................................................................................................................AGACCGTGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CT...............................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AAGGCCCAGGAAGTGAGTTCTTATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CGGACTGAAACG----AGG--ACGTGT......................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................C-----AAGCACAACGGACTGAAACG----AGG--ACG.........................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AGACCGTGACGGAAACGACTTCC-.......................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ACGGACTGAAACG----AGG--ACG.........................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AGCACAACGGACTGAAACG----AGG--ACGTGT......................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAACGGACTGAAACG----AGG--ACGTGT......................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ACAGACCGTGACGGAAAC...............................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
..........................................................................................................TCAATATAAATAA--ACAGACCGTGACGGA..................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................AACG----AGG--ACGTGTA--AA-AAAGA...........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAACGGACTGAAACG----AGG--ACG.........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CACAACGGACTGAAACG----AGG--ACGTG.......................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGAAACG----AGG--ACGTGTA--AA-AAAGACA.........................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000
.....................................................................................................................AA--ACAGACCGTGACGGAAA................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
..................................................................................................................................................................................................................................................................AGCACAACGGACTGAAACG----A................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAACGGACTGAAACG----AGG--A...........................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AACGGACTGAAACG----AGG--ACGTGT......................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CACAACGGACTGAAACG----AGG--ACGTGT......................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GGACTGAAACG----AGG--ACGTGT......................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CACAACGGACTGAAACG----AGG--ACGTGTA--T..................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCACATAAA-------AA-------------AACCTGACCC-------AAT.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GATTGTCGTCTCCGCAGCCATGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................CCCAGGAAGTGAGTTCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCTCCGCAGCCATGTCGAAGGCCCAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AAGGCCCAGGAAGTGAGTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GAC-----AAGCACAACGGACTGAAACA----TC...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGATTGTCGTCTCCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AAATAA--ACAGACCGTGACGGAAACGACT...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................C-----AAGCACAACGGACTGAAACG----A................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................AA--ACAGACCGTGACGGAAACGACTTC.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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............................................................CGAAGGCCCAGGAAGTGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
-----------------------------GCTAACTCGATTGCCGTCTCCGCAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGGGACAGAAACGACACCC-A-------------------------------------------------------------------------------------CTGATTAACAGTAAATGAC-----AAGCACAACGGACTGAAACG----AGG--ACGTGTA--AAGAAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA---------AAGAA---------------------------------------ATAT----------------AATGAAAGA--------ATAAATGTAATTTCACACACA--------A-------------AACCTGACCC-------AATTTCGACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................CACAACGGACTGAAACG----AGG--ACG.........................................................................................................................................................................................................................................2314.00401300000000000000
.....................................................................................................................................................................................................................................................AAATGAC-----AAGCACAACGGACT...........................................................................................................................................................................................................................................................2112.00200200000000000000
..............................................................................................................................................................................................................................................................................TGAAACG----AGG--ACGTGTA--AAGAAAGACAA--T----------T..........................................................................................................................................................................................................3012.00200000002000000000
......................................................................................................................................................................................................................................................................CAACGGACTGAAACG----AGG--AC..........................................................................................................................................................................................................................................2012.00202000000000000000
..............................................................................................................................CCGGGACAGAAACGA.............................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
.............................................................................................................................................................................................................................................TTAACAGTAAATGAC-----AAGCACAACGGA.............................................................................................................................................................................................................................................................2711.00100000000100000000
..................................................................................................................................................................................................................................................................AGCACAACGGACTGAAACG----AGG--ACGTG.......................................................................................................................................................................................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................AAATGAC-----AAGCACAACGGACG...........................................................................................................................................................................................................................................................2111.00100100000000000000
........................................................................................................................................................................................................................................................TGAC-----AAGCACAACGGACTGAAACG----A................................................................................................................................................................................................................................................2511.00100000010000000000
.................................................................................................................................................................................................................................................................AAGCACAACGGACTGAAACG----AGG--ACG.........................................................................................................................................................................................................................................2611.00100000000001000000
......................................................................................................................................................................................................................................................................CAACGGACTGAAACG----AGG--ACGT........................................................................................................................................................................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................AACAGTAAATGAC-----AAGCACAACGGACT...........................................................................................................................................................................................................................................................2711.00101000000000000000
.........................................................................................................................................................................................................................................................GAC-----AAGCACAACGGACTGAAACG----AGG--AC..........................................................................................................................................................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................GGACTGAAACG----AGG--ACGT........................................................................................................................................................................................................................................1811.00100010000000000000
...................................................................................TATCATAGTTATAGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
.......................................................................................................................................................................................................................................................................AACGGACTGAAACG----AGG--ACGT........................................................................................................................................................................................................................................2111.00100100000000000000
....................................................................................................................................................................................................................................................TAAATGAC-----AAGCACAACGGACTGAAACG----A................................................................................................................................................................................................................................................2911.00100000010000000000
.......................................TTGCCGTCTCCGCAGCCATGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
....................................................................................................................................................................................................................................................TAAATGAC-----AAGCACAACGGAAC...........................................................................................................................................................................................................................................................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................TGAAACG----AGG--ACGTGTA--AAGAAAGACAA--T----------...........................................................................................................................................................................................................2911.00100000000100000000
.....................................................................................................................................................................................................................................................AAATGAC-----AAGCACAACGGACTGAAACG----AG...............................................................................................................................................................................................................................................2911.00100000010000000000
...........................................................................................................................AGACCGGGACAGAAACGACACCC-A-------------------------------------------------------------------------------------CTG..............................................................................................................................................................................................................................................................................................2711.00100010000000000000
..................................................................................................................AATAA--ACAGACCGGGACAGAAACGACACC.........................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..............................................................................................................TATAAATAA--ACAGACCGGGACAGAAA................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...................................................................................................................................................................................................................................................................GCACAACGGACTGAAACG----AGG--ACGTG.......................................................................................................................................................................................................................................2611.00110000000000000000
.........................................GCCGTCTCCGCAGCCATGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................................................................................AA--ACAGACCGGGACAGG..................................................................................................................................................................................................................................................................................................................................................................................................1720.50100000001000000000
.........................................................................................................GTCAATATAAATAA--A................................................................................................................................................................................................................................................................................................................................................................................................................15110.09100000000001000000
droSec2
-----------------------------GCTAACTCGATTGCCGTCTCCGCAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGGGACAGTAACGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACCGTAAATGAC-----AAGCACAACGGACTGAAACG----AGG--ACGTGTA--AAGAAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA------A--AAGAA---------------------------------------ATAT----------------AATGAAAGA--------ATAAATGTAATTTCACATACA--------A-------------AACCTGACC-------GAATTTCGACTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
-----------------------------GCTAACTCGATTGTCGTCTCCGCAGCCATGTCAAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATAA--ACAGACCGTGACGGAAACGACTTCC-A-------------------------------------------------------------------------------------CTGATGAACAGGAAATAAC-----AAACACAACGGACTGAAACG----AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----CA-----A--AAA-----------GAA---------------------------------------AC-----------------------------ATAA---ATTATGTAACTGCACATACG--------A-------------ATC------------------CAGACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................AATAAC-----AAACACAACGGACTGAAACG----.................................................................................................................................................................................................................................................2612.00210000010000
.................................................................................................................................................................................................................................................................AAACACAACGGACTGAAACG----AGG--ACGT........................................................................................................................................................................................................................................2711.00101000000000
...........................................................................................................CAATATAAATAA--ACAGACCGTGACG....................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000100000
...................................................................................................................................................................................................................................................................ACACAACGGACTGAAACG----AGG--ACGT........................................................................................................................................................................................................................................2511.00100000010000
........................................................ATGTCAAAGGCCCAGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.............................GCTAACTCGATTGTCGTCTCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
....................................................................................................................TAA--ACAGACCGTGACGGAAA................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
-----------------------------GCTAACTCCATTATCGTCTCCACAGCCATGTCGAAGGCCCAGGAAGTGAGTTCTTATCATAGTTATAGAAACCATAGTCAATATAAATGA--ACAGACCGCGACGGAATCGACTTCC-A-------------------------------------------------------------------------------------CTGATTAACAGGAAATAAC-----AAACACAACGGACTGAAACG----AGG--ACGTGTA--AA-AAAGACAA--T----------TTCC--------------------TC----CA-----A--AACGAAAA-------------------------------------------------------------------------------ATAA---ATGATGTAATTGCACATACG--------A-------------AACCT------------------GACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................AATAAC-----AAACACAACGGACTG..........................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................CTGAAACG----AGG--ACGTGTA--AA-AAA.............................................................................................................................................................................................................................2311.0010000100

Generated: 05/18/2015 at 12:52 AM