ID:

dps_1515

 Coordinate:

4_group3:2723261-2723411 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.3 -10.0 -9.7 -9.5

Flybase annnotation

exon [dpse_GLEANR_2082:22]; CDS [Dpse\GA25805-cds]; intron [Dpse\GA25805-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATAACTTCAGTCATTACTACAACAGTTGTGACCAAAACTGATACCACTCGTAAGGCTAATACTTTGGATGAACCGAAGCAGGAAATCGTTCAGCCGAAAACATCTCCACCTGTGGCACAACCTGTTGTGCATAATGTTTGGGAACTGCATTCGTCTTATGCTGATGTTCTGAGGCACACTGTCGATTTTATTGACTTGGAGAAGAAAAATGTGCACGTCGAAATTGAGCCTAAATCAACCAAGAACACAG
****************************************************************............((.((((..........(((....(((........))))))....))))))**************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
 M022
male body		 V112
male body		 GSM444067
head
 SRR902011
testis
................................................................TTGGATGAACCGAAGCAGGA....................................................................................................................................................................... 20 0 1 7.00 7 0 0 7 0 0 0 0 0
....................................AACTGATACCACTCGTAAGGC.................................................................................................................................................................................................. 21 0 1 2.00 2 0 1 0 0 1 0 0 0
.......................................................................................................................................................................................................GAGAAGAAAAATGTGCACGT................................ 20 0 1 2.00 2 0 0 2 0 0 0 0 0
........................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAAA........................................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0
................................................................TTGGATGAACCGAAGCAGG........................................................................................................................................................................ 19 0 1 2.00 2 0 0 2 0 0 0 0 0
..........GTCATTACTACAACAGTTGT............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCACGTCGAAATTGAGCCTAAAT............... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TACTTTGGATGAACCGAAGCAGG........................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................AATGTGCACGTCGAAATTGAGCC.................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0
..................................AAAACTGATACCACTCGTAAG.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GTGCACGTCGAAATTGAGCCTAAAT............... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................ATCAGGAAATCGTTAAGCCGAAAAC..................................................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACGTCGAAATTGAGCCTAAATCAACCAAG....... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................TCTCCACCTGTGGCACAACCTGTT............................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................CTTATGCTGATGTTCTGAGGCA.......................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................GAAGCAGGAAATCGTTCAGC............................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................TTTATTGACTTGGAGAAGA............................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGAGCCTAAATCAACCAAGA...... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................GACTTGGAGAAGAAAAAT........................................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0
....................................AACTGATACCACTCGTAAGGCT................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................CATCTTATGCTGATGTTCTGAGGC........................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
.ATAACTTCAGTCATTACTACGAC................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................CCACCTGTGGCACAACCTGTC............................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................AGAAGAAAAATGTGCACGTCGA............................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................TCTGAGGCACACTGTCGATT............................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................GACTTGGAGAAGAAAAATGTGC.................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................AACTGATACCACTCGTAAGGCTA................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAATGTGCACGTCGAAATTGAGCCT................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...AACTTCAGTCATTACTACAACAGTTGT............................................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................TGACTTAGAGAAGAAAAA......................................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0
...................................................................................................AACATCTCCACCTGTGGCACAAC................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0
...............TACTACAACAGTTGTGACCAAAAC.................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................AATACTTTGGATGAACCGA.............................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................GACCAAAACTGATACCACTCGC....................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0
...................................AAACTGATACCACTCGTAAGGC.................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0
......................................................................................................................................................TTCATCTTATGCTGATGTTCTGAG............................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 1 0
.................CTACAACAGTTGTGACCAAAAC.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................TTGGATGAACCGAAGCAG......................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAA............................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAAAAAT........................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0
.......................................................................AACCGAAGCAGGAAATCGTTCAGCCGA......................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................GTTTGGGAACTGCATTCGTCT.............................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................TTGGATGAACCGAAGCAGGAAATC................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................CTGATGTTCTGAGGCACA........................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0
..........................................................................................................................................TTGGGAACTGCATTCGTCTTATGCT........................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................ATGCTGATGTTCTGAGGCACACTGTC................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................TCGTAAGGCTAATACTTTGGATGAACC................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 1
...................................................................................................AACATCTCCACCTGAGGCACA................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0
...............................................................................................CGAAAACATCTCCACCTGTGGCA..................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GATGTTCTGAGGCACACTGTCGATT............................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TGGAGAAGAAAAATGTGCACGTCGAA............................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................TGAACCGAAGCAGGAAATCGTC................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................ATTCATCTTATGCTGATGTTCTGAGGCA.......................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................CTCGTAAGGCTAATACTTTGGATG.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................AATGTGCACGTCGAAATTGAGC..................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................CAGCCGAAAACATCTCCACCTGTGGCACA................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................AACCGAAGCAGGAAATCGTTCAGCCG.......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GAAGAAAAATGTGCACGTCGAA............................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................ACTGCATTCGTCTTATGC......................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................CTTTGGATGAACCGAAGCAGGAAATCGT................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................GGATGAACCGAAGCAGGAA...................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................AAAACATCTCCACCTGTGGCAC.................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................ATCTTATGCTGATGTTCTGAGGCAC......................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................TTCATCTTATGCTGATGTTCTGAGG............................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................TGAACCGAAGCAGGAAATCGTT................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................ATCTCCACCTGTGGCACAACCTGTTGT.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................GACTTTATTGCCTTGGAGAAGAAAAAT........................................ 27 2 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................AGAACCTGTTGTGCATAATGTTTGGGAA.......................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................CTGATGTTCTGAGGCACACTGTC................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0
...............................................................TTTGGATGAACCGAAGCAGGAAATC................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................CTAATACTTTGGATGAACCGA.............................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................CAGCCGAAAACATCTCCACCTGTGGCAC.................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................AGCAGGAAATCGTTCAGCCGA......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................GATGAACCGAAGCAGGAAATC................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................TTGGATGAACCGAAGCAGGAA...................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.............ATTACTACAACAGTTGTGACCAAAACT................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................AACCGAAGCAGGAAATCGTT................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................AAAACTGATACCACTCGTAAGGC.................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................AGCAGGAAATCGTTCAGCCGAAAACAT................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................CAAAACTGATACCACTCGTAAG.................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................GACCAAAACTGATACCACT.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TTATTGACTTGGAGAAGAAAA.......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................AAGGCTAATACTTTGGATGA................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAAAATGTGCACGTCGAAATTGAGC..................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................AACTGCATTCGTCTTATGCTGATGTT.................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................GACCAAAACTGATACCACTCGTAAGGCC................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGAGCCTAAATCAACCAAGA...... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
..................................................GTAAGGCTAATACTTTGGAT..................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................AAACTGATACCACTCGTAAGG................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................GACCAAGACTGATACCACTCGTAA..................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................CTAATACTTTGGATGAACCGAAGCA.......................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................TTGTCTTGGAGAAGAAAAA......................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................TTATGCTGATGTTCTGAGGCACACTGTC................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................GGCTAATACTTTGGATGAACCGA.............................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...AACTTCAGTCATTACTACAACAGTT............................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................CATAATGTTTGGGAACTGC...................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGAAAAATGTGCACGTCGAAATTGAGC..................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................TCCACCTGTGGCACAACCTGC............................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................TGTTTGGGAACTGCATTCGTCC.............................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0
...............................ACCAAAACTGATACCACTCGT....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
............................GTGACCAAAACTGATACCACTCGTA...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................TGATACCACTCGTAAGGCT................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................CTAATACTTTGGATGAACC................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................TTGTCTTGGAGAAGGAAAA......................................... 19 2 4 0.50 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................TCCTTGTCTTGGAGAAGAAAAA......................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................AACCTGTTGTGCATATGG.................................................................................................................. 18 2 3 0.33 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................TTGTCTTGGAGAAAAAAAA......................................... 19 2 15 0.13 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTCTTGGAGAAGAAAAAA........................................ 19 2 8 0.13 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTATCTTGGAGAAGAAAAA......................................... 19 2 9 0.11 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGGACTTGGAGATGAAAAA......................................... 19 2 11 0.09 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCTGGACTTTGAGAAGAAAAA......................................... 21 3 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTTGACTGGGATAAGAAAAA......................................... 20 3 20 0.05 1 0 0 0 0 0 1 0 0
.................................................CGTAAGGTTTATACTTTGA....................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

TTATTGAAGTCAGTAATGATGTTGTCAACACTGGTTTTGACTATGGTGAGCATTCCGATTATGAAACCTACTTGGCTTCGTCCTTTAGCAAGTCGGCTTTTGTAGAGGTGGACACCGTGTTGGACAACACGTATTACAAACCCTTGACGTAAGCAGAATACGACTACAAGACTCCGTGTGACAGCTAAAATAACTGAACCTCTTCTTTTTACACGTGCAGCTTTAACTCGGATTTAGTTGGTTCTTGTGTC
****************************************************************************************************************************............((.((((..........(((....(((........))))))....))))))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 V112
male body
..................................................................................................................................................ACGTAAGGAGAATACAACTA..................................................................................... 20 2 1 1.00 1 1 0 0
.....................TTGCCAACAGTAGTTTTGACT................................................................................................................................................................................................................. 21 3 2 0.50 1 0 1 0
...........AGGTATGATCTTGTCAACAC............................................................................................................................................................................................................................ 20 3 2 0.50 1 1 0 0
.....................................................................................................................................................................................................................................GAATTTAGTTGGTGCTTG.... 18 2 6 0.17 1 1 0 0
.........................................................................................AAGTGTGCTTTTGAAGAGGT.............................................................................................................................................. 20 3 13 0.15 2 0 0 2
.......................................................................................................................................................................................................................................ATTTAGTTGGTGCTTGATTC 20 3 8 0.13 1 0 0 1
........................................................................................................................................................................................CTAAGATAACTCAACCTATT............................................... 20 3 11 0.09 1 1 0 0
....................................................................TATTTGGGTTCGTCCCTTA.................................................................................................................................................................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group3:2723211-2723461 - dps_1515 AAT-----AACTTCA-GTCATTACTA---CAACAG---TTGTGACCAAAACTGATACCACTCGTAAGGCTAATACTTTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GAAAACAT----------------------------C------TCCACCTGTGGCACAACCTGTTGTGCATAATGTTTGGGAACTGCATTCGTCTTATGCTGATGTTCTGAGGCACACTGTCGATTTTATTGACTTGGAGAAGAAAAATGTGCACGTCGAAATTGAGCCTAAATCAACCAAGAACAC----------A---------------------G
droPer2 scaffold_1:4208784-4209034 - AAT-----AACTTCA-GTCATTACTA---CAACAG---TTGTGACCAAAACTGATACCACTCGTAAGGCTAATACTTTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GAAAACAT----------------------------C------CCCACCTGTGGCACAACCTGTTGTGCAAAATGTTTGGGAACTGCATTCATCTTATGCTGATGTTCTGAGGCACACTGTCGATTTTATTGACTTGGAGAAGAAAAATGTGCACGTCGAAATTGAGCCTAAATCAACCAAGAACAC----------A---------------------G
droWil2 scf2_1100000004585:1105652-1105874 - AAC-----TACAACA-GTCACAACGA---CAACTA---CACTGACGGAAAAA------ATTTCTGCAAATCCTGTTTCG-----------------------------------------------------------------------------------ACCATTGAGA--------------------------------------------------------------------------------------------------AATCTAATCCA----------GACGTGTCAAATGTGTGGGAGCGACATTCGTCATATGCTGATGTCCTTAAACACACACTTGATTTTATTGCCATCGAGAAAAATAATGTTGAAACCCCAAGAGATGA---------------TCAAT-TGACA-AAACAATCGTTTGAAGACGCTGAG
droVir3 scaffold_12963:6423022-6423136 - AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTTGGGATCAAAATTCATCATATGCAAATGTACTCAAGCACACAATTAATTTCATAGATGGTGAAAAGAAAAACGTTGAAAAAATCACGGATA------------ATAGTACCC-CAACCACA---------------------G
droGri2 scaffold_15252:9652019-9652268 - TGT-----AAATGCA-CCTGCTACAGAAAGGATTACATCAACTACTGAAACA------GTCA------------CTGTGA---------GGGATATTGT-----------------T-------------CAACCAGCTGAACCCGAGATGAAGGAGTCT------------------T------------------CTCAGCTTATGCCAACCGATCTGGCTTCATTT-------------------------------------------------GAT----------ATACCTATCAACGTTTGGGATCAGAATTCATCGTATGCAGACGTATTGAAGCATACAACGAGTTTTATAGAGGGTGAGAAGCAAAACGTTGAGAGAGTTCCTGAAGTTA----------GAACAC----------A---------------------A
droAna3 scaffold_12916:9988344-9988594 - CAT-----CAAAACT-GTTACCACCA---CCATAG---TCACCGCTGAAACG------GTCAACAATTT---GATTCCCA---------AGGATGTCAA-----------------A----------------------------------AAGCATAGCAAAGTG---------A------------------TT--TCAGAAGAT--------------------------------------------------GTTAAAATT------TCTACATGT----------AAGGCGCCTAATGTCTGGGAATTACATTCATCGTATGCTGAGGTTGTCAAACATACAGAGGACTTTATTGATTTGGAAAAGAAAAATGTGGAAAAACCGCATTCTTCAAAAACTTTGTATGTCCAATCTA-AGGAA---------------------G
droBip1 scf7180000396580:1041773-1042041 + GAT-----TACAAGT-GTAACCATCA---CCACAG---ATTCCACTGAAACT------GCCAACAATGT---TATTTTCA---------CAGACATAAA-----------------G----------------------------------AAGCCTGTGGAAGCGCAGAAAAAATTGGTTACCG---------TT--TCAGAAGAT--------------------------------------------------ATCCAAAT------ACTGACACCC----------AAGCCGACTAATGTCTGGGAATTACATTCATCTTATGCTGATGTTGTTAAACACACAGAAGATTTTATTGATTTGGAAAAGAAAAATGTAGACAAACTCCACCATTCAAAAATCTCCAGTATTGAACCCA-AGGAA---------------------G
droKik1 scf7180000302643:690722-690942 - CAT-----TACTATA-GTTACGACCG---CAACAG---TAACTACTGC------------------------------------------GGAACAACA-----------------G----------------------------------AAA---CTAGAGTCTCAAGAGAAACTTCAGGAATCCAA------------------------------------------AACA-------------------------------GCCGTTTC------A----------GCCGTTCCAAATGTTTGGGAACGGCATTCTTCTTACGCAGACGTTTTGAGGCATACTGTTGACTTTATTGACTTAGAAAAGAAAAATGTGGAAATCCCAACTGATTCAAAACCTACCAAGAATTT----------A---------------------A
droFic1 scf7180000453842:1069942-1070180 - AAC-----CACAACC-AC------------TACTA---TAACCTCTGAGCCA------ACCAGTCAACTCTCTATTCCAT---------CA------------------------------------------------AATGATAAG---CCTTCTGACAAAAC------------TG-------------------------------------------------------------AAAAATTATTTTTGGAGGCTGAGGAGTTACCTTCAAAATCA----------ATCCCCAAAAATGTGTGGGAACTTCATTCATCGTATGCTGATGTCTTGAGACACACTGTGGACTTTATTAGCTTAGAGAAGAAAAATGTTGAAATTCCTGTTGAACCGAAAATAA-------------------AA---------------------G
droEle1 scf7180000491273:42524-42824 - AGA-----CACTTCC-AGCTCTAAGT---CTAAGC---CAACTGTTGAAGCT------CCTA------------CTGTGC---------TTAAAACGAAGAATACGACTAAGTCAGACAAGGAAATTTCTTACCCGTCGGAAGTCGAA---CAACTTAAAAAACC------------AG-------------------------------------------------------------AAGAATTTCCAGTGGAAGCCAGGGCAATACCTATGAAATCA----------TCGCCTCCTAATGTGTGGGAACTGCATTCATCGTATGCTGATGTCTTAAGGCACACTGTTGACTTTATAAGCTTGGAAAAGAAAAATGTAGAAATCCCATCTAAACCCAAAACTGGTAAACCTCATT-TAACA-AA---------------------A
droRho1 scf7180000779577:42289-42415 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGGGAACTGCATTCATCATACGCTGATGTTCTAAGGCACACTGTGGACTTTATTAGCTTGGAAAAGAAGAATGTAGAAATCCCAAATGAACCCAAACCTGATAAAGGCAATT-CAACAAGA---------------------G
droBia1 scf7180000302261:613420-613678 + AATAGCATTGAAACA-GTTACCGCCA---CAGTTG---TTACTACGAAGTCT------ACTATAGAAACTGTTCCTTCTG---------AGGAGCCCAG-----------------GCAAATG----------------GATTTCAAG---CCCTC---------------------------------------------------GGAAGTAAATGATGCTAAAAAC-------------------------------------------------CGA----------AAACCTGCCAATATGTGGGAATTGCATTCTTCATATGCCGATGTTTTGAGGCACACTGTTGATTTCATAAATTTGGAACAGAAAAATGTAGAAATCCCAACTGAGCCAAAAGCAGTAAAAGGTCAAC-CAGCAAAA---------------------G
droTak1 scf7180000415704:352132-352408 - AAT-----TACAGCA-GTTACCACCA---CAATTG---AGACTACTGAGTCT------ACCAGCGAAAC---AATTCCGG---------AGGAGCCCAA-----------------G----------------------------------CAAACGGGTGAACCGGTGCAGATACCTG------------------AGCAGCC-------------------------AAAGAAATCGGAACCATTACCTGCAGATGCCAAGAA---------------A----------AAACCCACTAATGTTTGGGAACTGCACTCATCATATGCTGATGTTTTGAGGCACACGGTGGACTTTATCAACTTAGAACAGAAAAATGTTGAAGTACCAACTCAACCCCAACCAGTTAAAAATCAAC-TAGCA-AA---------------------A
droEug1 scf7180000409005:1063048-1063271 + AAT-----TAGAAGC-ATCTC---------TACTG---TTACCAAGGAAGCA------AATACCGAAACTTCTATCCCAT---------TA------------------------------------------------GATGGCAAG---CACGTTGAGAAACC------------TG-------------------------------------------------------------AA---------------ACC---------------AAGACT----------TTACCTCCTCATGTGTGGGAACTGCACTCGTCGTATGCTGATGTCTTAAGGCATACTCTTGATTTCATAAGTTTAGAAAAGAAAAATGTGGAAGTCCCAACTGAAAACAAAGTGGATAATAAACAAA-C------A---------------------A
dm3 chr2L:5172371-5172627 + TAT-----TACAACA-GTTACCACCA---CAACAA---CAACTACCGAAACC------ATTAGTGAACCAGTTATATCCG---------AGCAACCCAA-----------------G----------------------------------AAAACAGTAGAACCAGTGAAGAAACCTGAAGAATCCAC------------------------------------------AGAA-------------------------------GTCGAGCCAAAACCA----------TTGTCTTCTAATATATGGGAACTGCATTCGTCATATGCTGATGTCTTGCGTCATACTGTGGACTTCATAAGTTTAGAAAAGAATAATGTTGAAGTCCCAACTGAATCAAATTTAGGTAAAGTGCC----------A---------------------A
droSim2 2l:4983823-4984087 + CAT-----TACAACA-GTTACGACGA---CGACGACAACAACTACCAAAACC------ATTAGCGAACTTCCTATTCCCG---------AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAACCAGTGAAATCACCTGAAGAATACAA------------------------------------------AGAA-------------------------------GTCAAACCAAAGCCA----------TTGTCTTCTAATATATGGGAACAGCACTCGTCATATGCTGATGTCTTGCGTCACACTGTGGACTTCATAAGTTTAGAAAAGAATAATGTAGAAGTCCCAACTGAATCCAATTTAGGTAAAGTGCAAA-CAG----T---------------------A
droSec2 scaffold_5:3259422-3259658 + CAT-----TACAACA-GTTACGACCA---CGACAA---CAACTACCGAAACC------ATTAGCGAACTTCCTATTCCCG---------AGGAACCCAA-----------------G----------------------------------AATGTATTAGAACCAGTGAAATCACCTAAAGAATACAA------------------------------------------AGAA-------------------------------GTCAAACCAAAGCCA----------TTGTCTTCTAATATATGGGAACAGCACTCGTCATATGCTGATGTCTTGCGTCACACTGTGGACTTTATAAGTTTAGAAAAGAATAATGTAGAAGTCCGAACTGAATC---------------------------------------------------
droYak3 2L:10352092-10352252 - ATA-----TG-------------------------------------------------------AGGTAACGCTCTCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATCTAATATGTGGGAACTGCATTCGTCATATGCTGATGTGTTGCGTCACACTGTGGACTTTATAAGTTTAGAAAAGAATAATGTGGAAGTCCCAACTGAATTAAATGTAGTTAAGGGACA----------A---------------------A
droEre2 scaffold_4929:5253339-5253557 + AAC-----TTGAAGTAG---C---------------------------------------CAAAAAACC---AATTATGGATGTCTTAGATGA---------------------------------------------------------------------GCCAATGAAAGAGCCTAACAAAGAGGAAACAGTTTCTCAGC----------------------------------------------------------------------CAAAGCCA----------TTATCTTCTAATATATGGGAACTGCATTCGTCATATGCGGATGTTTTGCGTCACACTGTGGATTTCATAAGTTTAGAAAAGAATAACGTAGAAGTCCCATCTGAATCAAAGTTAGATAAAGGACA----------A---------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AAT-----AACTTCA-GTCATTACTA---CAACAG---TTGTGACCAAAACTGATACCACTCGTAAGGCTAATACTTTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GAAAACAT----------------------------C------TCCACCTGTGGCACAACCTGTTGTGCATAATGTTTGGGAACTGCATTCGTCTTATGCTGATGTTCTGAGGCACACTGTCGATTTTATTGACTTGGAGAAGAAAAATGTGCACGTCGAAATTGAGCCTAAATCAACCAAGAACAC----------A---------------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................TTGG---------ATGAACCGAA-----------------G----------------------------------CAGGA.....................................................................................................................................................................................................................................................................................................2017.0070000000007
................................................AACTGATACCACTCGTAAGGC............................................................................................................................................................................................................................................................................................................................................................................................2112.0021010000000
..............................................................................................................................................................................................................................................................................................................................................................................GAGAAGAAAAATGTGCACGT...............................................................2012.0020000000002
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAAA..........................................................................2412.0020110000000
............................................................................TTGG---------ATGAACCGAA-----------------G----------------------------------CAGG......................................................................................................................................................................................................................................................................................................1912.0020000000002
................GTCATTACTA---CAACAG---TTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................GCACGTCGAAATTGAGCCTAAAT..............................................2311.0010100000000
........................................................................TACTTTGG---------ATGAACCGAA-----------------G----------------------------------CAGG......................................................................................................................................................................................................................................................................................................2311.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGTGCACGTCGAAATTGAGCC...................................................2311.0010000001000
..............................................AAAACTGATACCACTCGTAAG..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTGCACGTCGAAATTGAGCCTAAAT..............................................2511.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGTCGAAATTGAGCCTAAATCAACCAAG......................................2911.0010010000000
............................................................................................................................................................................................................................................T----------------------------C------TCCACCTGTGGCACAACCTGTT...........................................................................................................................................................2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................CTTATGCTGATGTTCTGAGGCA.........................................................................................................2211.0010100000000
................................................................................................GAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGC......................................................................................................................................................................................................................................................2011.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................TTTATTGACTTGGAGAAGA............................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCCTAAATCAACCAAGA.....................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GACTTGGAGAAGAAAAAT.......................................................................1811.0010000010000
................................................AACTGATACCACTCGTAAGGCT...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................CCACCTGTGGCACAACCTGTC...........................................................................................................................................................2111.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................AGAAGAAAAATGTGCACGTCGA............................................................2211.0010010000000
...............................................................................................................................................................................................................................................................................................................................................TCTGAGGCACACTGTCGATT..............................................................................................2011.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................GACTTGGAGAAGAAAAATGTGC...................................................................2211.0010100000000
................................................AACTGATACCACTCGTAAGGCTA..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGTGCACGTCGAAATTGAGCCT..................................................2611.0010100000000
........AACTTCA-GTCATTACTA---CAACAG---TTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
........................................................................................................................................................................................................................................AACAT----------------------------C------TCCACCTGTGGCACAAC................................................................................................................................................................2311.0010010000000
.....................TACTA---CAACAG---TTGTGACCAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................AATACTTTGG---------ATGAACCGA...............................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..........................................GACCAAAACTGATACCACTCGC.................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
...............................................AAACTGATACCACTCGTAAGGC............................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000000
.......................CTA---CAACAG---TTGTGACCAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
............................................................................TTGG---------ATGAACCGAA-----------------G----------------------------------CAG.......................................................................................................................................................................................................................................................................................................1811.0010000000001
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAA...........................................................................2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAAAAAT.......................................................................2711.0010000001000
............................................................................................AACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GA..........................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................GTTTGGGAACTGCATTCGTCT.............................................................................................................................2111.0010010000000
............................................................................TTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------...............................................................................................................................................................................................................................................................................2411.0010000000001
........................................................................................................................................................................................................................................................................................................................................CTGATGTTCTGAGGCACA.......................................................................................................1811.0011000000000
.................................................................................................................................................................................................................................................................................................................TTGGGAACTGCATTCGTCTTATGCT.......................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................ATGCTGATGTTCTGAGGCACACTGTC..................................................................................................2611.0010100000000
............................................................TCGTAAGGCTAATACTTTGG---------ATGAACC.................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
...........................................................................................................................................................................................................C-------------------------GAAAACAT----------------------------C------TCCACCTGTGGCA....................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GATGTTCTGAGGCACACTGTCGATT..............................................................................................2511.0010000000001
............................................................................................................................................................................................................................................................................................................................................................................TGGAGAAGAAAAATGTGCACGTCGAA...........................................................2611.0010100000000
..........................................................................................TGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TC..........................................................................................................................................................................................................................................................2211.0010010000000
...........................................................CTCGTAAGGCTAATACTTTGG---------ATG.....................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGTGCACGTCGAAATTGAGC....................................................2211.0010000100000
.......................................................................................................................................................................................................CAGCC-------------------------GAAAACAT----------------------------C------TCCACCTGTGGCACA..................................................................................................................................................................2911.0010100000000
............................................................................................AACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------G...........................................................................................................................................................................................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................GAAGAAAAATGTGCACGTCGAA...........................................................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................ACTGCATTCGTCTTATGC........................................................................................................................1811.0010010000000
..........................................................................CTTTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------T...........................................................................................................................................................................................................................................................2811.0010010000000
..............................................................................GG---------ATGAACCGAA-----------------G----------------------------------CAGGAA....................................................................................................................................................................................................................................................................................................1911.0010000000001
......................................................................................................................................................................................................................................AAAACAT----------------------------C------TCCACCTGTGGCAC...................................................................................................................................................................2211.0010100000000
..........................................................................................TGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TT..........................................................................................................................................................................................................................................................2211.0010010000000
...........................................................................................................................................................................................................................................AT----------------------------C------TCCACCTGTGGCACAACCTGTTGT.........................................................................................................................................................2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................CTGATGTTCTGAGGCACACTGTC..................................................................................................2311.0010000001000
...........................................................................TTTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------...............................................................................................................................................................................................................................................................................2511.0010000000001
....................................................................CTAATACTTTGG---------ATGAACCGA...............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................CAGCC-------------------------GAAAACAT----------------------------C------TCCACCTGTGGCAC...................................................................................................................................................................2811.0010100000000
..................................................................................................A-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GA..........................................................................................................................................................................................................................2111.0010100000000
...............................................................................G---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------...............................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................TTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAA....................................................................................................................................................................................................................................................................................................2111.0010000000001
...................ATTACTA---CAACAG---TTGTGACCAAAACT.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
............................................................................................AACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TT..........................................................................................................................................................................................................................................................2011.0010100000000
..............................................AAAACTGATACCACTCGTAAGGC............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................A-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GAAAACAT----------------------------........................................................................................................................................................................................2711.0010100000000
.............................................CAAAACTGATACCACTCGTAAG..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................GACCAAAACTGATACCACT....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................TTATTGACTTGGAGAAGAAAA.........................................................................2111.0010100000000
................................................................AAGGCTAATACTTTGG---------ATGA....................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................AAAAATGTGCACGTCGAAATTGAGC....................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................AACTGCATTCGTCTTATGCTGATGTT.................................................................................................................2611.0010100000000
..........................................GACCAAAACTGATACCACTCGTAAGGCC...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCTAAATCAACCAAGA.....................................2011.0010000100000
..............................................................GTAAGGCTAATACTTTGG---------AT......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................AAACTGATACCACTCGTAAGG.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................CTAATACTTTGG---------ATGAACCGAA-----------------G----------------------------------CA........................................................................................................................................................................................................................................................................................................2511.0010010000000
...................................................................................................................................................................................................................................................................................................................................TTATGCTGATGTTCTGAGGCACACTGTC..................................................................................................2811.0010010000000
..................................................................GGCTAATACTTTGG---------ATGAACCGA...............................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........AACTTCA-GTCATTACTA---CAACAG---TT.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................................................................................................CATAATGTTTGGGAACTGC.....................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................AGAAAAATGTGCACGTCGAAATTGAGC....................................................2711.0010010000000
................................................................................................................................................................................................................................................................................TCCACCTGTGGCACAACCTGC............................................................................................................................................................2111.0010010000000
..............................................................................................................................................................................................................................................................................................................TGTTTGGGAACTGCATTCGTCC.............................................................................................................................2211.0010010000000
...........................................ACCAAAACTGATACCACTCGT.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................GTGACCAAAACTGATACCACTCGTA................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................TGATACCACTCGTAAGGCT...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................CTAATACTTTGG---------ATGAACC.................................................................................................................................................................................................................................................................................................................................................................1911.0011000000000
droPer2
AAT-----AACTTCA-GTCATTACTA---CAACAG---TTGTGACCAAAACTGATACCACTCGTAAGGCTAATACTTTGG---------ATGAACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------GAAAACAT----------------------------C------CCCACCTGTGGCACAACCTGTTGTGCAAAATGTTTGGGAACTGCATTCATCTTATGCTGATGTTCTGAGGCACACTGTCGATTTTATTGACTTGGAGAAGAAAAATGTGCACGTCGAAATTGAGCCTAAATCAACCAAGAACAC----------A---------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................CTAATACTTTGG---------ATGAACC.................................................................................................................................................................................................................................................................................................................................................................1914.004400000
........................................................................................................................................................................................................................................................................................................GCAAAATGTTTGGGAACTGC.....................................................................................................................................2013.003002001
....................................................GATACCACTCGTAAGGCT...........................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
..................CATTACTA---CAACAG---TTGTGACC...................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
..........................................GACCAAAACTGATACCACTC...................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.....................................................ATACCACTCGTAAGGCTAATACTTTGG---------AT......................................................................................................................................................................................................................................................................................................................................................................2913.003300000
..........................................GACCAAAACTGATACCACTCGT.................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
....................................................................CTAATACTTTGG---------ATGAAC..................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.............................................................................................ACCGAA-----------------G----------------------------------CAGGAAATC------------------G------------------TTCAGCC-------------------------............................................................................................................................................................................................................................2412.002200000
.....................................................................TAATACTTTGG---------ATGAACC.................................................................................................................................................................................................................................................................................................................................................................1812.002200000
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGAAGAAA..........................................................................2412.002000002
..........................................GACCAAAACTGATACCACTCGTAAGGCT...........................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.........................................................CACTCGTAAGGCTAATACTTTGG---------ATG.....................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.............................................................................................................................................................................................................................................................................................................................................GTTCTGAGGCACACTGTC..................................................................................................1812.002200000
..................CATTACTA---CAACAG---TTGTGAC....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............................................................................TGG---------ATGAACCGAA-----------------G----------------------------------CAGGAA....................................................................................................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAG................................................................................1811.001100000
.....................................................ATACCACTCGTAAGGCTAATACT.....................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................AACAT----------------------------C------CCCACCTGTGGCACA..................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGAAG.............................................................................2111.001100000
..........................................GACCAAAACTGATACCACTCGTAAGGCG...........................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGAAGA............................................................................2211.001100000
...................ATTACTA---CAACAG---TTGTGACC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................GTGCAAAATGTTTGGGAACT.......................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................GCAAAATGTTTGGGAACTGCAT...................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................................CATCTTATGCTGATGTTCTGAGGC..........................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................ATGTGCACGTCGAAATTGAGC....................................................2111.001100000
.AT-----AACTTCA-GTCATTACTA---CAACAG---TTG........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.....................................................ATACCACTCGTAAGGCTAATACTTTG..................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......................................................................ATACTTTGG---------ATGAACCGA...............................................................................................................................................................................................................................................................................................................................................................1811.001100000
.AT-----AACTTCA-GTCATTACTA---CAACAG---TTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000
..................................................................................................................................................................................................................................................................................................................................................................TTTATTGACTTGGAGAAG.............................................................................1811.001100000
...................................................................GCTAATACTTTGG---------ATGAACCGAA-----------------G----------------------------------CAG.......................................................................................................................................................................................................................................................................................................2711.001010000
....................TTACTA---CAACAG---TTGTGACCAAAACT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
........................................................................................................................................................................................................................................................................................................GCAAAATGTTTGGGAACTGCATT..................................................................................................................................2311.001000001
................................................AACTGATACCACTCGTAAGGCTA..........................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................AAGGCTAATACTTTGG---------AT......................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................CACGTCGAAATTGAGCCTAAATC.............................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGACTTGGAGA...............................................................................1911.001010000
droWil2
AAC-----TACAACA-GTCACAACGA---CAACTA---CACTGACGGAAAAA------ATTTCTGCAAATCCTGTTTCG-----------------------------------------------------------------------------------ACCATTGAGA--------------------------------------------------------------------------------------------------AATCTAATCCA----------GACGTGTCAAATGTGTGGGAGCGACATTCGTCATATGCTGATGTCCTTAAACACACACTTGATTTTATTGCCATCGAGAAAAATAATGTTGAAACCCCAAGAGATGA---------------TCAAT-TGACA-AAACAATCGTTTGAAGACGCTGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................GA---CAACTA---CACTGACGGAAAAA------AT.....................................................................................................................................................................................................................................................................................................................................................................................................2414.00401120
............................................................................................................................................................................................................................................................................................................................ATTCGTCATATGCTGATGTCCT...............................................................................................................2214.00410030
.................................................................................................................................................................................................................................................................................................................GTGGGAGCGACATTCGTCATATGCT.......................................................................................................................2513.00300030
...............................................................................................................................................................................................................................................................................ATCTAATCCA----------GACGTGTCAAATGT................................................................................................................................................2413.00302010
........................................................................................................................................................................................................................................................................................................GTCAAATGTGTGGGAGCGACA....................................................................................................................................2112.00200110
........................................................................................................................................................................................................................................................................................................GTCAAATGTGTGGGAGCGAC.....................................................................................................................................2012.00200200
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATCGTTTGAAGACGC....1912.00200110
.................................................................................................................................................................................................................................................................................................................................................................................................CCCCAAGAGATGA---------------TCAAT-TGACA-AAA.....................2612.00220000
..............................................................................................................................................................................................................................................................................AATCTAATCCA----------GACGTGTCAAATGT................................................................................................................................................2512.00200020
..............................................................................................................................................................................................................................................................................AATCTAATCCA----------GACGTGTC......................................................................................................................................................1912.00200110
............................................................................................................................................................................................................................................................................................................................ATTCGTCATATGCTGATG...................................................................................................................1812.00210010
.................................................................................................................................................................................................................................................................................................................GTGGGAGCGACATTCGTCATATGCTGAT....................................................................................................................2812.00200200
.................................................................................................................................................................................................................................................................................CTAATCCA----------GACGTGTCAAAT..................................................................................................................................................2012.00200110
.............................................................................................................................................................................................................................................................................................................................................................................................GAAACCCCAAGAGATGA---------------TCAAT-TGAC..........................2612.00202000
............................................................................................................................................................................................................................................................................................................................ATTCGTCATATGCTGATGTC.................................................................................................................2012.00220000
...................................................................................................................................................................................................................................................................................................GACGTGTCAAATGTGTGGGAGCGAC.....................................................................................................................................2512.00200200
..............................................................CTGCAAATCCTGTTTCG-----------------------------------------------------------------------------------ACC............................................................................................................................................................................................................................................................................................2012.00220000
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCATCGAGAAAAATAATGTTGA..................................................................2611.00100010
...................................................................................................................................................................................................................................................................................AATCCA----------GACGTGTCAAATGT................................................................................................................................................2011.00100010
..................................................................................................................................................................................................................................................................................................................TGGGAGCGACATTCGTCATATGCTGAT....................................................................................................................2711.00100100
..............................................................CTGCAAATCCTGTTTCG-----------------------------------------------------------------------------------ACCATTGA.......................................................................................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................GAAACCCCAAGAGATGA---------------TCAAT-TGA...........................2511.00100010
...........................................................................................................................................................................A--------------------------------------------------------------------------------------------------AATCTAATCCA----------GACGTGTCAAAT..................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................TTGAAACCCCAAGAGATGA---------------TCAAT-..............................2411.00100100
...................................................................................................................................................................................................................................................................................AATCCA----------GACGTGTCAAATGTGT..............................................................................................................................................2211.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAACAATCGTTTGAAGA.......1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................................TGCCATCGAGAAAAATAATGT.....................................................................2111.00100010
..............................................................CTGCAAATCCTGTTTCG-----------------------------------------------------------------------------------AC.............................................................................................................................................................................................................................................................................................1911.00101000
.................................................................................................................................................................................................................................................................................................................GTGGGAGCGACATTCGTCATATGCTGA.....................................................................................................................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................AATGTTGAAACCCCAAGAGATGA---------------TC..................................2511.00100010
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCATCGAGAAAAATAATGTTG...................................................................2511.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................GAAACCCCAAGAGATGA---------------TCAAT-T.............................2311.00100010
.....................AACGA---CAACTA---CACTGACGGA.................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................TTGAAACCCCAAGAGATGA---------------T...................................2011.00100010
..............................................................................................................................................................................................................................................................................AATCTAATCCA----------GACGTGT.......................................................................................................................................................1811.00100010
......................................................................................................................................................................................................................................................................................................................................TGCTGATGTCCTTAAACACACA.....................................................................................................2211.00101000
........................................CTGACGGAAAAA------ATTTCTGCA..............................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
...............................................................................................................................................................................................................................................................................................................................................................GATTTTATTGCCATCGAG................................................................................1811.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGAGATGA---------------TCAAT-TGACA-........................1911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................GATGA---------------TCAAT-TGACA-AAACAATCGT..............2511.00110000
................................................................................................................................................................................................................................................................................................................................................................................................ACCCCAAGAGATGA---------------TCAAT-T.............................2011.00100100
....................................................................................................................................................................................................................................................................................................................................................................TATTGCCATCGAGAAAAATAAT.......................................................................2211.00100100
...........................................................................................................................................................................A--------------------------------------------------------------------------------------------------AATCTAATCCA----------GACGTGTCAAATGT................................................................................................................................................2611.00101000
....................................................................ATCCTGTTTCG-----------------------------------------------------------------------------------ACCATTGAGA--------------------------------------------------------------------------------------------------...................................................................................................................................................................................2111.00101000
........................................................................................................................................................................................................................................................................................A----------GACGTGTCAAATGTGTGGGAGC........................................................................................................................................2311.00100010
..............................................................................................................................................................................................................................................................................................................TGTGTGGGAGCGACATTCGTCATATGCT.......................................................................................................................2811.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATCGTTTGAAGACGCTGAG2311.00100100
............................................................................................................................................................................................................................................................................................................................................................................................TGAAACCCCAAGAGATGA---------------TCAAT-..............................2311.00100100
..............................................................................................................................................................................................................................................................................................................................................................TGATTTTATTGCCATCGAGA...............................................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................AGAGATGA---------------TCAAT-TGACA-........................1811.00110000
..................................................................AAATCCTGTTTCG-----------------------------------------------------------------------------------ACCATTGAG......................................................................................................................................................................................................................................................................................2211.00100100
.........................A---CAACTA---CACTGACGGAAAAA------ATTT...................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCATCGAGAAAAATAAT.......................................................................2111.00100010
.................................................................................................................................................................................................................................................................................CTAATCCA----------GACGTGTCAAATGTGT..............................................................................................................................................2411.00100100
..............................................................CTGCAAATCCTGTTTCG-----------------------------------------------------------------------------------ACCAT..........................................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................ACCCCAAGAGATGA---------------TCAAT-..............................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................ATTTTATTGCCATCGAGAAAAATAAT.......................................................................2611.00100010
..........................................................................................................................................................................................................................................................................................................................................................CACTTGATTTTATTGCCATC...................................................................................2011.00100010
................................CTA---CACTGACGGAAAAA------AT.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..............................................................................................................................................................................................................................................................................AATCTAATCCA----------GACGTGTCAAAT..................................................................................................................................................2311.00100100
.....................................................................................................................................................................ATTGAGA--------------------------------------------------------------------------------------------------AATCTAATCCA----------GACGTGTC......................................................................................................................................................2611.00100100
......................................................................................................................................................................................................................................................................................................................................................................TTGCCATCGAGAAAAATAAT.......................................................................2011.00100100
..........................................................................................................................................................................................................................................................................................................CAAATGTGTGGGAGCGAC.....................................................................................................................................1811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................AACCCCAAGAGATGA---------------TCAAT-T.............................2111.00100100
............................................................................................................................................................................................................................................................................................................................................................................................TGAAACCCCAAGAGATGA---------------TCA.................................2111.00100100
droVir3
AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTTGGGATCAAAATTCATCATATGCAAATGTACTCAAGCACACAATTAATTTCATAGATGGTGAAAAGAAAAACGTTGAAAAAATCACGGATA------------ATAGTACCC-CAACCACA---------------------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................CATCATATGCAAATGTACTCAAGC..........................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATCAAAATTCATCATATGCAAAT....................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ACTCAAGCACACAATTAATTT.............................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATA------------ATAGTACCC-CAACCACA---------------------.2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GAAAAAATCACGGATA------------ATAGTACCC-C.............................2611.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AATCACGGATA------------ATAGTACCC-CAAC..........................2411.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GAAAAGAAAAACGTTGAAAAA..............................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TCATAGATGGTGAAAAGAAAAACGTT....................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GGGATCAAAATTCATCATATGCA.......................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AAAAATCACGGATA------------ATAGTACC................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AAAAGAAAAACGTTGAAAAA..............................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATAGATGGTGAAAAGAAAAACGTT....................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAATGTACTCAAGCACACAATC..................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GTTTGGGATCAAAATTCATC..............................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCACACAATTAATTTCATAGATGGTG..................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AGCACACAATTAATTTCATA.........................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TTCATCATATGCAAATGTACTCAAGCACA.......................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTTGAAAAAATCACGGATA------------ATAGTACCC-C.............................2911.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATCACGGATA------------ATAGTACCC-..............................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGGGATCAAAATTCATCATATGCAAAT....................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AAAAATCACGGATA------------ATAGTACCC-CAACC.........................2811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATAGATGGTGAAAAGAAA..........................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
droGri2
TGT-----AAATGCA-CCTGCTACAGAAAGGATTACATCAACTACTGAAACA------GTCA------------CTGTGA---------GGGATATTGT-----------------T-------------CAACCAGCTGAACCCGAGATGAAGGAGTCT------------------T------------------CTCAGCTTATGCCAACCGATCTGGCTTCATTT-------------------------------------------------GAT----------ATACCTATCAACGTTTGGGATCAGAATTCATCGTATGCAGACGTATTGAAGCATACAACGAGTTTTATAGAGGGTGAGAAGCAAAACGTTGAGAGAGTTCCTGAAGTTA----------GAACAC----------A---------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................GAACCCGAGATGAAGGAGTC..................................................................................................................................................................................................................................................................................................2011.00110
....................................................................................................................................ACCAGCTGAACCCGAGATG..........................................................................................................................................................................................................................................................................................................1911.00110
...................................................................................................................................................................................................................................................................................................................................................................................GCAAAACGTTGAGAGAGTTCCTG.......................................................2311.00110
....................................................................................................................................................................................................................................................................................................................................................................TATAGAGGGTGAGAAGCA...........................................................................1811.00110
......................................................................................................................................................................................................................................................................................................CCTATCAACGTTTGGGATCA.......................................................................................................................................2011.00110
........................................................................................................................................GCTGAACCCGAGATGAAGGA.....................................................................................................................................................................................................................................................................................................2011.00110
droAna3
CAT-----CAAAACT-GTTACCACCA---CCATAG---TCACCGCTGAAACG------GTCAACAATTT---GATTCCCA---------AGGATGTCAA-----------------A----------------------------------AAGCATAGCAAAGTG---------A------------------TT--TCAGAAGAT--------------------------------------------------GTTAAAATT------TCTACATGT----------AAGGCGCCTAATGTCTGGGAATTACATTCATCGTATGCTGAGGTTGTCAAACATACAGAGGACTTTATTGATTTGGAAAAGAAAAATGTGGAAAAACCGCATTCTTCAAAAACTTTGTATGTCCAATCTA-AGGAA---------------------GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................CCCA---------AGGATGTCAA-----------------A----------------------------------AAGC......................................................................................................................................................................................................................................................................................................1912.002010001
...................................................................................................................................................................................................................................................................................................................................................................TTATTGATTTGGAAAAGAAAAAT.......................................................................2312.002000020
.......................................................................................................................................................................................................................................................................................GT----------AAGGCGCCTAATGTCTGGGAA.........................................................................................................................................2312.002000020
..............................................................................................................................................................................................................................................................................................................................................................GGACTTTATTGATTTGGAAAA..............................................................................2112.002101000
..........................................................................................................................................................................................................................................................................................................................................GAGGTTGTCAAACATACAGAGGACTTT............................................................................................2712.002000002
....................CCACCA---CCATAG---TCACCGCTGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................2512.002011000
...........................................................................................................................................................ATAGCAAAGTG---------A------------------TT--TCAGAAGAT--------------------------------------------------GTT.............................................................................................................................................................................................2612.002011000
.......................................................................................................................................................................................................................................................................................................................ATTACATTCATCGTATGCTGAGGTT.................................................................................................................2512.002000020
...................................................................................................................................................................................................................................................................................................AAGGCGCCTAATGTCTGGGA..........................................................................................................................................2012.002000020
..............................................................................................GTCAA-----------------A----------------------------------AAGCATAGCAAAGT............................................................................................................................................................................................................................................................................................2012.002000002
.......................................................................................................................................................................................................................................................................................GT----------AAGGCGCCTAATGTCTGGGA..........................................................................................................................................2212.002000020
............................................................................................................................................................................................................................................................................................................................ATTCATCGTATGCTGAGGT..................................................................................................................1911.001000010
..........AAACT-GTTACCACCA---CCATAG---TCACCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
....................................................................................................................................................................................................................................................................AAAATT------TCTACATGT----------AAGGCG........................................................................................................................................................2111.001010000
CAT-----CAAAACT-GTTACCACCA---CC..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................GTCTGGGAATTACATTCATC..............................................................................................................................2011.001010000
.AT-----CAAAACT-GTTACCACCA---CCAC................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................................................CATGT----------AAGGCGCCTAATGTCTGGGA..........................................................................................................................................2511.001001000
..............................................................................................................................................................................................................T--------------------------------------------------GTTAAAATT------TCTACATGT----------AAGGCGC.......................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................................................................ATCGTATGCTGAGGTTGTCAA............................................................................................................2111.001000010
.........................A---CCATAG---TCACCGCTGAAACG------G......................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................TGAGGTTGTCAAACATACAGAGG.................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................ATTGATTTGGAAAAGAAAAA........................................................................2011.001010000
................................................................................................CAA-----------------A----------------------------------AAGCATAGCAAAGTG---------A------------------T..............................................................................................................................................................................................................................................................2111.001010000
.........................................................................ATTCCCA---------AGGATGTCAA-----------------A----------------------------------AAGC......................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................CTACATGT----------AAGGCGCCTAATGTCTG.............................................................................................................................................2511.001000010
.......................................................................................................................................................................................................................................................................................................................ATTACATTCATCGTATGCTGAGGTC.................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................TCTACATGT----------AAGGCGCCTAATGTCTGG............................................................................................................................................2711.001001000
.......................................................................................................................................................AAGCATAGCAAAGTG---------A------------------TT--TCAGAAGAT--------------------------------------------------................................................................................................................................................................................................2711.001001000
..........................................................................................................................................................................................................................................................................................................................ACATTCATCGTATGCTGAGGTTGT...............................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................GAATTACATTCATCGTATGCTGA.....................................................................................................................2311.001100000
........CAAAACT-GTTACCACCA---CCATAG---TCACC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
....................................................................................................................................................................................................................................................................................CATGT----------AAGGCGCCTAATGTCTGGGAA.........................................................................................................................................2611.001010000
...................................................................................................................................................................................................T--TCAGAAGAT--------------------------------------------------GTTAAAATT------TCTA.............................................................................................................................................................................2311.001001000
......................................................................................................................................................................................................................................................................................TGT----------AAGGCGCCTAATGTCTGGG...........................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................................ATACAGAGGACTTTATTGATTTG...................................................................................2311.001010000
.....................................................................................................................................................................................................................................................................................ATGT----------AAGGCGCCTAATGTCTGGGA..........................................................................................................................................2411.001010000
........................................................................GATTCCCA---------AGGATGTCAA-----------------A----------------------------------AAGCAT....................................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................AGGTTGTCAAACATACAGAGGACTT.............................................................................................2511.001010000
................................................AACG------GTCAACAATTT---GATTCCCA---------AGGA....................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.........................A---CCATAG---TCACCGCTGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................TTCCCA---------AGGATGTCAA-----------------A----------------------------------AAGC......................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................TCAA-----------------A----------------------------------AAGCATAGCAAAGT............................................................................................................................................................................................................................................................................................1911.001000001
............................................................................................................................................................................................................GAT--------------------------------------------------GTTAAAATT------TCTACATGT----------AAGGCGC.......................................................................................................................................................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................AAGAAAAATGTGGAAAAACC............................................................2011.001010000
................................................................................................CAA-----------------A----------------------------------AAGCATAGCAAAGTG---------A------------------TT--...........................................................................................................................................................................................................................................................2211.001010000
..........................................................GTCAACAATTT---GATTCCCA---------AGGAC...................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................................................................................................................................................................GTG---------A------------------TT--TCAGAAGAT--------------------------------------------------GTTAAAATT------T................................................................................................................................................................................2511.001010000
............................................................................................ATGTCAA-----------------A----------------------------------AAGCATAGCAAAGTG---------A------------------T..............................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................GCTGAGGTTGTCAAACATACA.....................................................................................................2111.001000001
...............................................................................................................................................................................................................................................................................................................................CATCGTATGCTGAGGTTGTCAAAC..........................................................................................................2411.001010000
......................................................................................................................................................................................................................................................................AATT------TCTACATGT----------AAGGCGCCTAAT..................................................................................................................................................2511.001010000
.............................................................................................TGTCAA-----------------A----------------------------------AAGCATAGCAAAGTG---------A------------------C..............................................................................................................................................................................................................................................................2411.001010000
..............................................................................................................................................................GCAAAGTG---------A------------------TT--TCAGAAGAT--------------------------------------------------GTT.............................................................................................................................................................................................2311.001000010
.....................................................................................................................................................................................................................................................................AAATT------TCTACATGT----------AAGGCGC.......................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................CTACATGT----------AAGGCGCCTAATGTCTGGGA..........................................................................................................................................2811.001000010
droBip1
GAT-----TACAAGT-GTAACCATCA---CCACAG---ATTCCACTGAAACT------GCCAACAATGT---TATTTTCA---------CAGACATAAA-----------------G----------------------------------AAGCCTGTGGAAGCGCAGAAAAAATTGGTTACCG---------TT--TCAGAAGAT--------------------------------------------------ATCCAAAT------ACTGACACCC----------AAGCCGACTAATGTCTGGGAATTACATTCATCTTATGCTGATGTTGTTAAACACACAGAAGATTTTATTGATTTGGAAAAGAAAAATGTAGACAAACTCCACCATTCAAAAATCTCCAGTATTGAACCCA-AGGAA---------------------GSizeHit CountTotal NormTotal
No Reads
droKik1
CAT-----TACTATA-GTTACGACCG---CAACAG---TAACTACTGC------------------------------------------GGAACAACA-----------------G----------------------------------AAA---CTAGAGTCTCAAGAGAAACTTCAGGAATCCAA------------------------------------------AACA-------------------------------GCCGTTTC------A----------GCCGTTCCAAATGTTTGGGAACGGCATTCTTCTTACGCAGACGTTTTGAGGCATACTGTTGACTTTATTGACTTAGAAAAGAAAAATGTGGAAATCCCAACTGATTCAAAACCTACCAAGAATTT----------A---------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
AAC-----CACAACC-AC------------TACTA---TAACCTCTGAGCCA------ACCAGTCAACTCTCTATTCCAT---------CA------------------------------------------------AATGATAAG---CCTTCTGACAAAAC------------TG-------------------------------------------------------------AAAAATTATTTTTGGAGGCTGAGGAGTTACCTTCAAAATCA----------ATCCCCAAAAATGTGTGGGAACTTCATTCATCGTATGCTGATGTCTTGAGACACACTGTGGACTTTATTAGCTTAGAGAAGAAAAATGTTGAAATTCCTGTTGAACCGAAAATAA-------------------AA---------------------GSizeHit CountTotal NormTotal
No Reads
droEle1
AGA-----CACTTCC-AGCTCTAAGT---CTAAGC---CAACTGTTGAAGCT------CCTA------------CTGTGC---------TTAAAACGAAGAATACGACTAAGTCAGACAAGGAAATTTCTTACCCGTCGGAAGTCGAA---CAACTTAAAAAACC------------AG-------------------------------------------------------------AAGAATTTCCAGTGGAAGCCAGGGCAATACCTATGAAATCA----------TCGCCTCCTAATGTGTGGGAACTGCATTCATCGTATGCTGATGTCTTAAGGCACACTGTTGACTTTATAAGCTTGGAAAAGAAAAATGTAGAAATCCCATCTAAACCCAAAACTGGTAAACCTCATT-TAACA-AA---------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGGGAACTGCATTCATCATACGCTGATGTTCTAAGGCACACTGTGGACTTTATTAGCTTGGAAAAGAAGAATGTAGAAATCCCAAATGAACCCAAACCTGATAAAGGCAATT-CAACAAGA---------------------GSizeHit CountTotal NormTotal
No Reads
droBia1
AATAGCATTGAAACA-GTTACCGCCA---CAGTTG---TTACTACGAAGTCT------ACTATAGAAACTGTTCCTTCTG---------AGGAGCCCAG-----------------GCAAATG----------------GATTTCAAG---CCCTC---------------------------------------------------GGAAGTAAATGATGCTAAAAAC-------------------------------------------------CGA----------AAACCTGCCAATATGTGGGAATTGCATTCTTCATATGCCGATGTTTTGAGGCACACTGTTGATTTCATAAATTTGGAACAGAAAAATGTAGAAATCCCAACTGAGCCAAAAGCAGTAAAAGGTCAAC-CAGCAAAA---------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
AAT-----TACAGCA-GTTACCACCA---CAATTG---AGACTACTGAGTCT------ACCAGCGAAAC---AATTCCGG---------AGGAGCCCAA-----------------G----------------------------------CAAACGGGTGAACCGGTGCAGATACCTG------------------AGCAGCC-------------------------AAAGAAATCGGAACCATTACCTGCAGATGCCAAGAA---------------A----------AAACCCACTAATGTTTGGGAACTGCACTCATCATATGCTGATGTTTTGAGGCACACGGTGGACTTTATCAACTTAGAACAGAAAAATGTTGAAGTACCAACTCAACCCCAACCAGTTAAAAATCAAC-TAGCA-AA---------------------ASizeHit CountTotal NormTotal
No Reads
droEug1
AAT-----TAGAAGC-ATCTC---------TACTG---TTACCAAGGAAGCA------AATACCGAAACTTCTATCCCAT---------TA------------------------------------------------GATGGCAAG---CACGTTGAGAAACC------------TG-------------------------------------------------------------AA---------------ACC---------------AAGACT----------TTACCTCCTCATGTGTGGGAACTGCACTCGTCGTATGCTGATGTCTTAAGGCATACTCTTGATTTCATAAGTTTAGAAAAGAAAAATGTGGAAGTCCCAACTGAAAACAAAGTGGATAATAAACAAA-C------A---------------------ASizeHit CountTotal NormTotal
No Reads
dm3
TAT-----TACAACA-GTTACCACCA---CAACAA---CAACTACCGAAACC------ATTAGTGAACCAGTTATATCCG---------AGCAACCCAA-----------------G----------------------------------AAAACAGTAGAACCAGTGAAGAAACCTGAAGAATCCAC------------------------------------------AGAA-------------------------------GTCGAGCCAAAACCA----------TTGTCTTCTAATATATGGGAACTGCATTCGTCATATGCTGATGTCTTGCGTCATACTGTGGACTTCATAAGTTTAGAAAAGAATAATGTTGAAGTCCCAACTGAATCAAATTTAGGTAAAGTGCC----------A---------------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................ATATGGGAACTGCATTCGTC..............................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000100
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCATACTGTGGA................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000100000000000010000000
.......................................................................................................................................................AAAACAGTAGAACCAGTGAAG.....................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000
.............................................................................................................................................................GTAGAACCAGTGAAGAAA..................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AATATATGGGAACTGCATTC.................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000
.........................................................................................................................................................................AAGAAACCTGAAGAATCCAC------------------------------------------AGA.......................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GAAACCTGAAGAATCCAC------------------------------------------AGAA-------------------------------GT.....................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................ATGCTGATGTCTTGCGTCAT........................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCATAAGTTTAGAAAAGA............................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
CAT-----TACAACA-GTTACGACGA---CGACGACAACAACTACCAAAACC------ATTAGCGAACTTCCTATTCCCG---------AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAACCAGTGAAATCACCTGAAGAATACAA------------------------------------------AGAA-------------------------------GTCAAACCAAAGCCA----------TTGTCTTCTAATATATGGGAACAGCACTCGTCATATGCTGATGTCTTGCGTCACACTGTGGACTTCATAAGTTTAGAAAAGAATAATGTAGAAGTCCCAACTGAATCCAATTTAGGTAAAGTGCAAA-CAG----T---------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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..............................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATAATGTAGAAGTCCCAACT........................................................2711.00100010000000000000
..........................................................................................................................................................................................................................................................................................................CTAATATATGGGAACAGCACTC.................................................................................................................................2211.00101000000000000000
....................CGACGA---CGACGACAACAACT......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................CATAAGTTTAGAAAAGAATAATGTAGAA.................................................................2811.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GAATAATGTAGAAGTCCCAACTGAATC...................................................2711.00100100000000000000
....................CGACGA---CGACGACAACAACTAC....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
................................................................................................................................................................................CTGAAGAATACAA------------------------------------------AGAA-------------------------------GTC....................................................................................................................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................TGTCTTGCGTCACACTGTGGACT..............................................................................................2311.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGTAGAAGTCCCAACTGAAT....................................................2211.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGTGGA................................................................................................2311.00100100000000000000
...................ACGACGA---CGACGACAACAACTACC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGTAGAAGTCCCAACTGAATCCAATT..............................................2811.00100100000000000000
.............................................................................................ACCCAA-----------------G----------------------------------AAGGTAGTAGAACCAGTGAA......................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................TACCAAAACC------ATTAGCGAACTTCCTA.......................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................AATAATGTAGAAGTCCCAACT........................................................2111.00101000000000000000
.............................................................AGCGAACTTCCTATTCCCG---------AG......................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATAATGTAGAAGTCCCAACTGAA.....................................................2411.00100010000000000000
.............................................................................................ACCCAA-----------------G----------------------------------AAGGTAGTAGAACCAGT.........................................................................................................................................................................................................................................................................................2411.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................CACTGTGGACTTCATAAG.......................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................GAACAGCACTCGTCATATGCTG......................................................................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATAATGTAGAAGTCCCAAC.........................................................2011.00110000000000000000
...........................................................................................GAACCCAA-----------------G----------------------------------AAGGTAGTAGAACCAGT.........................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................GACGA---CGACGACAACAACTACCA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
................................................................GAACTTCCTATTCCCG---------AGG.....................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
............................................................................................................................................................AGTAGAACCAGTGAAATCACCTGAAGAAC........................................................................................................................................................................................................................................................................2911.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AAGAATAATGTAGAAGTCCCAACT........................................................2411.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGTAGAAGTCCCAACT........................................................1811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGTGGACTT.............................................................................................2611.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGTCCCAACTGAATCC..................................................2111.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................GTCTTGCGTCACACTGTGGA................................................................................................2011.00100000000000100000
..................TACGACGA---CGACGACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGTCCCAACTGAATCCAATTTAG...........................................2811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................ACTGTGGACTTCATAAGC......................................................................................1811.00100100000000000000
............................................................................................AACCCAA-----------------G----------------------------------AAGGTAGTAGAACCAGTGAA......................................................................................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGTGGAC...............................................................................................2411.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATGTAGAAGTCCCAACTGAATCCAATT..............................................2711.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................TGCTGATGTCTTGCGTCACACTGTGGAC...............................................................................................2811.00100000001000000000
............ACA-GTTACGACGA---CGACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TAATGTAGAAGTCCCAACTGAAT....................................................2311.00100100000000000000
CAT-----TACAACA-GTTACGACGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATAATGTAGAAGTCCCAAC.........................................................1911.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................GAACAGCACTCGTCATATGCT.......................................................................................................................2111.00101000000000000000
.........................................................................................AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................2570.86621210000000000000
...............................................................................G---------AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................2670.57401100011000000000
.........................................................................ATTCCCG---------AGGAACCCAA-----------------G----------------------------------AA........................................................................................................................................................................................................................................................................................................2020.50100000000000100000
................................................AACC------ATTAGCGAACTTCCTATT.....................................................................................................................................................................................................................................................................................................................................................................................2220.50100010000000000000
.................................................ACC------ATTAGCGAACTTCCT........................................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000000000
.............................................................................................ACCCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................2170.43301200000000000000
..............................................................................CG---------AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................2770.29200200000000000000
...........................................................................................GAACCCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................2370.29202000000000000000
................................................................................................CAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................1870.29211000000000000000
.........................................................................................AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAAC.............................................................................................................................................................................................................................................................................................2470.29201000000000100000
............................................................................................AACCCAA-----------------G----------------------------------AAGGTAGTAGAAC.............................................................................................................................................................................................................................................................................................2170.29200200000000000000
..............................................................................................CCCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................2070.29202000000000000000
..............................................................................................CCCAA-----------------G----------------------------------AAGGTAGTAGAAC.............................................................................................................................................................................................................................................................................................1970.14100100000000000000
...............................................................................................CCAA-----------------G----------------------------------AAGGTAGTAGAACC............................................................................................................................................................................................................................................................................................1970.14100100000000000000
...............................................................................G---------AGGAACCCAA-----------------G----------------------------------AAGGTAGTAGAAC.............................................................................................................................................................................................................................................................................................2570.14101000000000000000
...............................................................................................CCAA-----------------G----------------------------------AAGGTAGTAGAAC.............................................................................................................................................................................................................................................................................................1870.14100100000000000000
...............................................................................G---------AGGAACCCAA-----------------G----------------------------------AAGGTAG...................................................................................................................................................................................................................................................................................................1970.14100000000000100000
droSec2
CAT-----TACAACA-GTTACGACCA---CGACAA---CAACTACCGAAACC------ATTAGCGAACTTCCTATTCCCG---------AGGAACCCAA-----------------G----------------------------------AATGTATTAGAACCAGTGAAATCACCTAAAGAATACAA------------------------------------------AGAA-------------------------------GTCAAACCAAAGCCA----------TTGTCTTCTAATATATGGGAACAGCACTCGTCATATGCTGATGTCTTGCGTCACACTGTGGACTTTATAAGTTTAGAAAAGAATAATGTAGAAGTCCGAACTGAATC---------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGTGGACT..............................................................................................2513.0030120
.............................................................................................................................................................................CACCTAAAGAATACAA------------------------------------------AGAA-------------------------------GTC....................................................................................................................................................................................2312.0020110
.....................................................................................................................................................................................................................................................................................................................................................................................ATAATGTAGAAGTCCGAACT........................................................2012.0020011
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGTGGA................................................................................................2312.0021010
...............................................................................................................................................................................................................................................................................................................ATATGGGAACAGCACTCGTCAT............................................................................................................................2211.0010100
....................................................................................................................................................................................................................................................................................................................................................................................AATAATGTAGAAGTCCGAAC.........................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................ATATGGGAACAGCACTCGT...............................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................GAACAGCACTCGTCATATG.........................................................................................................................1911.0010010
.......................................AACTACCGAAACC------ATTAGCGAACTTCCT........................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
...........................................................................................................................................................................................................................................................................................................................................ATGTCTTGCGTCACACTGTGGACT..............................................................................................2411.0010100
.......................................................................................................................................................................................................................................................................................................................................GCTGATGTCTTGCGTCACACTGTGGACT..............................................................................................2811.0010010
........................................ACTACCGAAACC------ATTAGCGAACTTCCT........................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.................................................................................................AA-----------------G----------------------------------AATGTATTAGAACCAGT.........................................................................................................................................................................................................................................................................................2011.0010100
...............................................................................................................................................................................................................................................................................................................ATATGGGAACAGCACTCGTC..............................................................................................................................2011.0010010
...........................................................................TCCCG---------AGGAACCCAA-----------------G----------------------------------AAT.......................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................GTTTAGAAAAGAATAATGTAGAAGT...............................................................2511.0010010
..............................................................................................................................................................................................................................................................................................................................TCGTCATATGCTGATGTCTTG..............................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................ATAATGTAGAAGTCCGAACTGA......................................................2211.0010100
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGTGGAC...............................................................................................2411.0010010
.............................................................................................................................................................................................................................................................................................................................................GTCTTGCGTCACACTGTG..................................................................................................1811.0011000
................................................AACC------ATTAGCGAACTTCCT........................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................CTAATATATGGGAACAGCACTCGT...............................................................................................................................2411.0011000
.........................................................................................................................................................................................................................................................................................................................................TGATGTCTTGCGTCACACTGTGGACT..............................................................................................2611.0010010
..............................................................................................................................................................................................................................................................................................................TATATGGGAACAGCACTCGT...............................................................................................................................2011.0010010
...............................................................................................................................................................................................................................................................................................................ATATGGGAACAGCACTCGTCATA...........................................................................................................................2311.0010100
.............................................................................................................................................................................................................................................................................................................ATATATGGGAACAGCACTCGTCAT............................................................................................................................2411.0010010
..................................................................................................................................................................................................................................................................................................................................CATATGCTGATGTCTTGCGTCACA.......................................................................................................2411.0010010
............................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGAATAATGTAGAAGT...............................................................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................GATGTCTTGCGTCACACTGT...................................................................................................2011.0010010
........................................................................................................................................................................................................................................................................................................................................CTGATGTCTTGCGTCACACTGTGG.................................................................................................2411.0010100
.............................................................................................................................................................................................................................................................................................................................................GTCTTGCGTCACACTGTGG.................................................................................................1911.0010100
...........................................................................................................................................................................................................................................................................................................................................ATGTCTTGCGTCACACTGTGGA................................................................................................2211.0010010
..............................................................................................................................................................................ACCTAAAGAATACAA------------------------------------------AGAA-------------------------------GTC....................................................................................................................................................................................2211.0010010
.............................................................................................................................................................................................................................................................................................................ATATATGGGAACAGCACTCGT...............................................................................................................................2111.0010010
................................................AACC------ATTAGCGAACTTCC.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........................................................................................................................................................................................................................................................................................................CTAATATATGGGAACAGC.....................................................................................................................................1811.0010010
..................................................CC------ATTAGCGAACTTCCTATTCCCG---------AGG.....................................................................................................................................................................................................................................................................................................................................................................2711.0010100
..........................................................................................................................................................................................................................................................................................................CTAATATATGGGAACAGCA....................................................................................................................................1911.0010100
.........................................CTACCGAAACC------ATTAGCGAACTTCCT........................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................................................................................AACCCAA-----------------G----------------------------------AATGTATTAGAACCAGT.........................................................................................................................................................................................................................................................................................2511.0010010
...................................................C------ATTAGCGAACTTCCTATTCCCG---------AGGA....................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.............................................................................................................................................................................................................................................................................................................ATATATGGGAACAGCACTC.................................................................................................................................1911.0010010
............................................................................................................................................................ATTAGAACCAGTGAAATCACCTAAAGA..........................................................................................................................................................................................................................................................................2711.0010010
.AT-----TACAACA-GTTACGACCA---CG..................................................................................................................................................................................................................................................................................................................................................................................................................................2130.6720020
..........................................TACCGAAACC------ATTAGCGAACT............................................................................................................................................................................................................................................................................................................................................................................................2150.4021100
CAT-----TACAACA-GTTACGACCA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310010
........TACAACA-GTTACGACCA---CGAC................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3311000
..T-----TACAACA-GTTACGACCA---CG..................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310100
.................................AA---CAACTACCGAAACC------ATTAGCGAA..............................................................................................................................................................................................................................................................................................................................................................................................2570.2921010
............ACA-GTTACGACCA---CGACAA---CAACTAC....................................................................................................................................................................................................................................................................................................................................................................................................................2640.2511000
...........AACA-GTTACGACCA---CGACAA---CAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2440.2511000
................GTTACGACCA---CGACAA---CAACT......................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510010
..........CAACA-GTTACGACCA---CGAT................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100
...........AACA-GTTACGACCA---CGACAA---CAACTAC....................................................................................................................................................................................................................................................................................................................................................................................................................2740.2511000
.......................................AACTACCGAAACC------ATTAGCGAACT............................................................................................................................................................................................................................................................................................................................................................................................2450.2010010
.........................................................................ATTCCCG---------AGGAACCCAA-----------------G----------------------------------AA........................................................................................................................................................................................................................................................................................................2050.2010010
........................................ACTACCGAAACC------ATTAGCGAACTT...........................................................................................................................................................................................................................................................................................................................................................................................2450.2010001
......................................CAACTACCGAAACC------ATTAGCGAAC.............................................................................................................................................................................................................................................................................................................................................................................................2450.2010100
....................CGACCA---CGACAA---CAACTACCG..................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010001
...........................................................................TCCCG---------AGGAACCCAA-----------------G----------------------------------AA........................................................................................................................................................................................................................................................................................................1860.1710010
........................CA---CGACAA---CAACTACCGAAACC------.......................................................................................................................................................................................................................................................................................................................................................................................................2270.1410010
.......................................AACTACCGAAACC------ATTAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................2170.1410010
..............................GACAA---CAACTACCGAAACC------ATTAGCG................................................................................................................................................................................................................................................................................................................................................................................................2670.1410010
.........................................CTACCGAAACC------ATTAGCGAA..............................................................................................................................................................................................................................................................................................................................................................................................2070.1410010
......................ACCA---CGACAA---CAACTACCGAA................................................................................................................................................................................................................................................................................................................................................................................................................2180.1311000
droYak3
ATA-----TG-------------------------------------------------------AGGTAACGCTCTCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATCTAATATGTGGGAACTGCATTCGTCATATGCTGATGTGTTGCGTCACACTGTGGACTTTATAAGTTTAGAAAAGAATAATGTGGAAGTCCCAACTGAATTAAATGTAGTTAAGGGACA----------A---------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................ATAATGTGGAAGTCCCAACT........................................................2013.00302000010000
.............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGAATAATGTGGAAGTCCCAACT........................................................2813.00300200010000
...................................................................................................................................................................................................................................................................................................................................ATATGCTGATGTGTTGCGT...........................................................................................................1912.00200000020000
...............................................................................................................................................................................................................................................................................................................ATGTGGGAACTGCATTCGTC..............................................................................................................................2012.00200000020000
........................................................................................................................................................................................................................................................................................................................................CTGATGTGTTGCGTCACACTGTGGACT..............................................................................................2712.00200000020000
.................................................................................................................................................................................................................................................................................................................................................................................AAGAATAATGTGGAAGTCCCAACT........................................................2412.00200000020000
...................................................................................................................................................................................................................................................................................................................................................................................GAATAATGTGGAAGTCCCAACT........................................................2212.00201100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATGTAGTTAAGGG....................................1812.00200200000000
............................................................................................................................................................................................A------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATCTA....................................................................................................................................................2112.00220000000000
........................................................................................................................................................................................................................................................................................................ATCTAATATGTGGGAACTGC.....................................................................................................................................2012.00200001010000
................................................................................................................................................................................................................................................................................................................................................................................AAAGAATAATGTGGAAGTCC.............................................................2012.00200100010000
............................................................................TCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGC................................................................................................................................................................................1912.00201100000000
.............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGAATAATGTGGAAGTCC.............................................................2311.00100000010000
.................................................................................................................................................................................................................................................................................CAA-------------------CATCTAATATGTGGG...........................................................................................................................................1811.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGTAGTTAAGGGAC..................................1911.00100010000000
...............................................................................................................................................................................................................................................................................................................ATGTGGGAACTGCATTCGT...............................................................................................................................1911.00100000010000
...............................................................................................................................................................................................................................................................................................................ATGTGGGAACTGCATTCGTCATATGCTT......................................................................................................................2811.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................GAAAAGAATAATGTGGAAGC...............................................................2011.00100100000000
.........................................................................................A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATCTAAT..................................................................................................................................................2611.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATGTAGTTAAGGGA...................................1911.00100000010000
.....................................................................AACGCTCTCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGC................................................................................................................................................................................2611.00100100000000
................................................................................................................................................................................................................................................................................CCAA-------------------CATCTAATATGTGGGAACTGCA....................................................................................................................................2611.00101000000000
............................................................................TCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATC......................................................................................................................................................2611.00100100000000
.....................................................................................................................................................................................................................................................................................................................................ATGCTGATGTGTTGCGTCA.........................................................................................................1911.00100000100000
ATA-----TG-------------------------------------------------------AGGTAACGCTCTCGA---------........................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................GATGTGTTGCGTCACACTGTGG.................................................................................................2211.00101000000000
...........................................................................CTCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGC................................................................................................................................................................................2011.00100100000000
.......................................................................................................................................................................................................................................................................................................CATCTAATATGTGGGAACTGC.....................................................................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................GTTGCGTCACACTGTGGACTT.............................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................TTAGAAAAGAATAATGTGGAAGTC..............................................................2411.00100100000000
.............................................................................................................................................................................................................................................................................GAGCCAA-------------------CATCTAATATGTGGG...........................................................................................................................................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................................................GTGTTGCGTCACACTGTGGACT..............................................................................................2211.00100000100000
...................................................................................................................................................................................................................................................................................................................................ATATGCTGATGTGTTGCGTCAC........................................................................................................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................................TTCGTCATATGCTGATGTGTTGCGTCA.........................................................................................................2711.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAGTTTAGAAAAGAATAATGTGGAAGTC..............................................................2811.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGAATAATGTGGAAGTCCCAAC.........................................................2711.00100000010000
...............................................................................................................................................................................................................................................................................................................................................GTTGCGTCACACTGTGGA................................................................................................1811.00110000000000
................................................................................................................................................................................................................................................................................................................TGTGGGAACTGCATTCGTCATATGCT.......................................................................................................................2611.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGAATAATGTGGAAGTC..............................................................2311.00100000010000
.........................................................................................A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATC......................................................................................................................................................2211.00100100000000
.........................................................................................................................................................................................................................................................................................................................................TGATGTGTTGCGTCACACTGTGGA................................................................................................2411.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGAATAATGTGGAAGT...............................................................2111.00100100000000
...................................................................................................................................................................................................................................................................................A-------------------CATCTAATATGTGGGAACTGCATTCG................................................................................................................................2711.00101000000000
........................................................................................................................................................................................................................................................................................................ATCTAATATGTGGGAACTGCATTCGT...............................................................................................................................2611.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................TCACACTGTGGACTTTATAAGTTT....................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAATGTAGTTAAGG.....................................1911.00100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................CCCAACTGAATTAAATGTAGT..........................................2111.00100000010000
...................................................................GTAACGCTCTCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGA..................................................................................................................................................................................2611.00100000010000
................................................................................................................................................................................................................................................................................CCAA-------------------CATCTAATATGTGGGAACTG......................................................................................................................................2411.00101000000000
................................................................................................................................................................................................................................................................................CCAA-------------------CATCTAATATGTGGGAACTGC.....................................................................................................................................2511.00100100000000
.................................................................................................................................................................................................................................................................................CAA-------------------CATCTAATATGTGGGAACTGC.....................................................................................................................................2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................GTTGCGTCACACTGTGGAC...............................................................................................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAATGTAGTTAAGGGA...................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................TTAGAAAAGAATAATGTGGAA.................................................................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................TAAGTTTAGAAAAGAATAATGTGGAAG................................................................2711.00100100000000
.......................................................................................................................................................................................................................................................................................................CATCTAATATGTGGGAACTG......................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................ATCTAATATGTGGGAACT.......................................................................................................................................1811.00101000000000
..................................................................................................................................................................................................................................................................................AA-------------------CATCTAATATGTGGGAACTGCATTCG................................................................................................................................2811.00100000010000
..........................................................................................................................................................................................................................................................................GTCGAGCCAA-------------------CATCTAATATGTGGGAA.........................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................AACTGAATTAAATGTAGTTAAGGG....................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................AATATGTGGGAACTGCATTCGTC..............................................................................................................................2311.00100000100000
...................................................................GTAACGCTCTCGA---------A------------------------------------------------------------------------------------------------TAA------------------------------------------AGTA-------------------------------GTCGAGC................................................................................................................................................................................2811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGAATTAAATGTAGTTAAGGGACA----------A---------------------A2611.00101000000000
............................................................................................................................................................................................................................................................................................................................ATTCGTCATATGCTGATGTGTTGCG............................................................................................................2511.00101000000000
...........................................................................................................................................................................................AA------------------------------------------AGTA-------------------------------GTCGAGCCAA-------------------CATCTAATAT................................................................................................................................................2611.00100100000000
.....................................................................................................................................................................................................................................................................................................................................ATGCTGATGTGTTGCGTCACACT.....................................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................TCACACTGTGGACTTTATAAGTTTAGA.................................................................................2711.00101000000000
.............................................................................................................................................................................................................................................................................................................ATATGTGGGAACTGCATTCGTCATA...........................................................................................................................2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGAATAATGTGGAAGC...............................................................2111.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................AAAGAATAATGTGGAAGTCCC............................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................ATCTAATATGTGGGAACTGCATTC.................................................................................................................................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................................................GTGTTGCGTCACACTGTGGA................................................................................................2011.00100100000000
..........................................................................................................................................................................................................................................................................................................................................GATGTGTTGCGTCACACTGTGGAC...............................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTGGAAGTCCCAACTGAATTAAATGTA............................................2711.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCCAACTGAATTAAATGTAGTTAAGG.....................................2711.00100010000000
...............................................................................................................................................................................................................................................................................................................ATGTGGGAACTGCATTCGTCA.............................................................................................................................2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGAATAATGTGGAAGTCCCAAC.........................................................2811.00101000000000
droEre2
AAC-----TTGAAGTAG---C---------------------------------------CAAAAAACC---AATTATGGATGTCTTAGATGA---------------------------------------------------------------------GCCAATGAAAGAGCCTAACAAAGAGGAAACAGTTTCTCAGC----------------------------------------------------------------------CAAAGCCA----------TTATCTTCTAATATATGGGAACTGCATTCGTCATATGCGGATGTTTTGCGTCACACTGTGGATTTCATAAGTTTAGAAAAGAATAACGTAGAAGTCCCATCTGAATCAAAGTTAGATAAAGGACA----------A---------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................AATATATGGGAACTGCATTC.................................................................................................................................2013.0030000210
................................................................................................................................................................................................................................................................................................................................GTCATATGCGGATGTTTTGC.............................................................................................................2013.0030000120
............................................................................................A---------------------------------------------------------------------GCCAATGAAAGAGCCTAACAAAGA.......................................................................................................................................................................................................................................................................2512.0020000110
................................................................................................................................................................................................................................................................................................................................GTCATATGCGGATGTTTTGCGT...........................................................................................................2212.0020000200
......................................................................................TAGATGA---------------------------------------------------------------------GCCAATGAAAGAGCC................................................................................................................................................................................................................................................................................2212.0020000020
.....................................................................................................................................................................................................................................................................................................................................................................................ATAACGTAGAAGTCCCATCT........................................................2012.0021000100
...........................................................................................................................................................................................................................................................................................................................................................................TTAGAAAAGAATAACGTAGAA.................................................................2112.0021100000
....................................................................................CTTAGATGA---------------------------------------------------------------------GCCAATGAAAGAGCCT...............................................................................................................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................................................AACAGTTTCTCAGC----------------------------------------------------------------------CAAAGCC.........................................................................................................................................................................2111.0010100000
.................................................................AACC---AATTATGGATGTCTTAGATGA---------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................2511.0010000010
............................................................................................A---------------------------------------------------------------------GCCAATGAAAGAGCCTAACA...........................................................................................................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................TTCTCAGC----------------------------------------------------------------------CAAAGCCA----------TTATCTT.......................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................CTAATATATGGGAACTGCATTC.................................................................................................................................2211.0010100000
..................................................................................................................................................................GCCAATGAAAGAGCCTAACAAAGAGGA....................................................................................................................................................................................................................................................................2711.0010000100
........................................................................................GATGA---------------------------------------------------------------------GCCAATGAAAGAGCCTAACA...........................................................................................................................................................................................................................................................................2511.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................AAGAATAACGTAGAAGTCCCAT..........................................................2211.0010000100
.............................................................................................................................................................................................AACAGTTTCTCAGC----------------------------------------------------------------------CAAAGCCA----------TTAT..........................................................................................................................................................2611.0011000000
........................................................................................................................................................................................................................................................................................A----------TTATCTTCTAATATATGGGA..........................................................................................................................................2111.0010000010
.....................................................................................................................................................................AATGAAAGAGCCTAACAAAGAGGA....................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................GAACTGCATTCGTCATATGC........................................................................................................................2011.0010000010
........................................................................AATTATGGATGTCTTAGATGA---------------------------------------------------------------------GCC............................................................................................................................................................................................................................................................................................2411.0011000000
..............................................................................................................................................................................GCCTAACAAAGAGGAAACAGT..............................................................................................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................GAATAACGTAGAAGTCCCATCT........................................................2211.0010000100
.....................................................................................................................................................................AATGAAAGAGCCTAACAAA.........................................................................................................................................................................................................................................................................1911.0010001000
........................................................................AATTATGGATGTCTTAGATGA---------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................2111.0010000010
................................................................................................................................................................................................................................................................................................................................GTCATATGCGGATGTTTTGCGTC..........................................................................................................2311.0010001000
.................................................................................................................................................................................................................................................................................................................................................TGCGTCACACTGTGGATTTCA...........................................................................................2111.0010000100
.............................................................................................................................................................................................................................................................................................................................................GTTTTGCGTCACACTGTGGA................................................................................................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTGAATCAAAGTTAGATAAAG.....................................2111.0010001000
........................................................................................................................................................................................................................................................................................................TTCTAATATATGGGAACTGCATT..................................................................................................................................2311.0010000010
......................................................................................................................................................................ATGAAAGAGCCTAACAAAGAG......................................................................................................................................................................................................................................................................2111.0010000100
.......................................................................................................................................................................................................................................................................................................................................................ACACTGTGGATTTCATAAGT......................................................................................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................ACGTAGAAGTCCCATCTGAATCAAA................................................2511.0010000100
....................C---------------------------------------CAAAAAACC---AATTATGGATGTCTTA.........................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGTTAGATAAAGGAC..................................1911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAATCAAAGTTAGAT.........................................1911.0010100000
....................................................................................CTTAGATGA---------------------------------------------------------------------GCCAATGAAAGAGC.................................................................................................................................................................................................................................................................................2311.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................AACGTAGAAGTCCCATCTGA......................................................2011.0010100000
...............................................................................................................................................................................................................................................................................................................................CGTCATATGCGGATGTTTTGCGT...........................................................................................................2311.0011000000
..............................................................................GGATGTCTTAGATGA---------------------------------------------------------------------GCC............................................................................................................................................................................................................................................................................................1811.0010000010
................................................................................................................................................................................................................................................................................................................................GTCATATGCGGATGTTTTGCGTCACACT.....................................................................................................2811.0010000010
........................................................................................GATGA---------------------------------------------------------------------GCCAATGAAAGAGCCTAACAAA.........................................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................AATAACGTAGAAGTCCCATCTG.......................................................2211.0010001000
........................................................................................GATGA---------------------------------------------------------------------GCCAATGAAAGAGC.................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................................................................................................................ATGGGAACTGCATTCGTCATATGC........................................................................................................................2411.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................ACGTAGAAGTCCCATCTGAATC...................................................2211.0010010000
............................................................................................................................................................................................................................................................................................................AATATATGGGAACTGCATTCGT...............................................................................................................................2211.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................AGTCCCATCTGAATCAAAGTTAGAT.........................................2511.0011000000
.....................................................................................................................................................................AATGAAAGAGCCTAACAAAGAGGAAAC.................................................................................................................................................................................................................................................................2711.0010000100
.............................................................................................................................................................................................................................................................................................................................TTCGTCATATGCGGATGTTTTGC.............................................................................................................2311.0010000100
..................................................................................................................................................................................................................................................................................................................................CATATGCGGATGTTTTGCGT...........................................................................................................2011.0010000010
..........................................................................................................................................................................................................................................................................................................CTAATATATGGGAACTGC.....................................................................................................................................1811.0010000010
...................................................................................................................................................................................................................................................................................................TTATCTTCTAATATATGGGA..........................................................................................................................................2011.0010000100

Generated: 05/18/2015 at 12:51 AM