dps_1506

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGGCAAAAGCCTGATTCTGTTTTGGTATAAATATGTGTAGGTAGAAACTTGTTTTAAATAAAAATCTAGGGGAGGTAGATTCCCTATGAAATTTACTAAGCAGAGCACTAGGTACACCTGACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGATTGTA *****************************************************************..((((.....(((....)))...)))).......................***********************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902011 testis	V112 male body	GSM444067 head	M040 female body	M022 male body	GSM343916 embryo
..................................................................................................TTGGTATAAATATGTGTAGG.....................................................................................................................................	20	0	1	9.00	9	7	1	1	0	0	0
...................................................................TAGGAAATATTGGCAAAAGC....................................................................................................................................................................	20	0	1	9.00	9	9	0	0	0	0	0
................................................................................................TTTTGGTATAAATATGTGTAG......................................................................................................................................	21	0	1	8.00	8	8	0	0	0	0	0
.....................................................................................................GTATAAATATGTGTAGGTAGA.................................................................................................................................	21	0	1	6.00	6	5	1	0	0	0	0
........................................................................................................TAAATATGTGTAGGTAGAAAC..............................................................................................................................	21	0	1	5.00	5	3	2	0	0	0	0
.................................................................................................TTTGGTATAAATATGTGTAG......................................................................................................................................	20	0	1	4.00	4	4	0	0	0	0	0
......................................ATGCAGCAATCAGTAAGAGGA................................................................................................................................................................................................	21	0	1	4.00	4	2	1	0	1	0	0
.................................................................................................TTTGGTATAAATATGTGTAGG.....................................................................................................................................	21	0	1	3.00	3	3	0	0	0	0	0
....................................................................................................GGTATAAATATGTGTAGGTAG..................................................................................................................................	21	0	1	3.00	3	3	0	0	0	0	0
......ATGAGCAGCCTCCTAAGAATC................................................................................................................................................................................................................................	21	0	1	2.00	2	1	1	0	0	0	0
..............................................................................................................................TGTTTTAAATAAAAATCTAGG........................................................................................................	21	0	1	2.00	2	2	0	0	0	0	0
..................................................................................AAAGCCTGATTCTGTTTTGGT....................................................................................................................................................	21	0	1	2.00	2	2	0	0	0	0	0
.......................................................................................CTGATTCTGTTTTGGTATAA................................................................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0
.......................................TGCAGCAATCAGTAAGAGG.................................................................................................................................................................................................	19	0	1	2.00	2	1	0	0	0	1	0
...................................................................TAGGAAATATTGGCAAAAGCC...................................................................................................................................................................	21	0	1	2.00	2	1	0	0	1	0	0
........................................GCAGCAATCAGTAAGAGGATC..............................................................................................................................................................................................	21	0	1	2.00	2	0	2	0	0	0	0
.......................................TGCAGCAATCAGTAAGAGGAT...............................................................................................................................................................................................	21	0	1	2.00	2	0	1	0	0	1	0
CATCTGATGAGCAGCCCCCTA......................................................................................................................................................................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
....................................TAATGCAGCAATCAGTAAGAG..................................................................................................................................................................................................	21	0	1	2.00	2	0	2	0	0	0	0
......................................ATGCAGCAATCAGTAAGAGG.................................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
............................................................................TTGGCAAAAGCCTGATTCTGT..........................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
..................................................................................................TTGGTATAAATATGTGTAG......................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
..TCTGATGAGCAGCCTCCTAA.....................................................................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
....................................................................AGGAAATATTGGCAAAAGC....................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
.................................................AGTAAGAGGATCTTTCCATAG.....................................................................................................................................................................................	21	0	1	1.00	1	0	0	1	0	0	0
..................................................................................................TTGGTATAAATATGTGTAGGA....................................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
.....................................AATGCAGCAATCAGTAAGAG..................................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
.........................................CAGCAATCAGTAAGAGGATC..............................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
...........................................................................ATTGGCAAAAGCCTGATT..............................................................................................................................................................	18	0	1	1.00	1	0	0	0	1	0	0
................................................................................................................TGTAGGTAGAAACTTGTTTTA......................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
.....................................AATGCAGCAATCAGTAAGAGG.................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
..................................................................ATAGGAAATATTGGCAAAAG.....................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
..................................................................ATAGGAAATATTGGCAAAAGC....................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
...................................................................................................TGGTATGAATAGATGTAGGTAG..................................................................................................................................	22	3	2	1.00	2	0	0	2	0	0	0
...........................................................................ATTGGCAAAAGCCTGATTCTG...........................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
...................................................TAAGAGGATCTTTCCATAGGA...................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
....................................................................................................GGTATAAATATGTGTAGGTA...................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
...........................................GCAATCAGTAAGAGGATCTT............................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
............................CAACATAGTGATGCAGCAATC..........................................................................................................................................................................................................	21	2	1	1.00	1	0	1	0	0	0	0
.....................................................AGAGGATCTTTCCATAGGAAA.................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
..........................CCCAACATGGTAATGCAGC..............................................................................................................................................................................................................	19	0	1	1.00	1	0	0	1	0	0	0
.....GATGAGCAGCCTCCTAAGA...................................................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
.........................................CAGCAATCAGTAGGAGGATC..............................................................................................................................................................................................	20	1	1	1.00	1	0	1	0	0	0	0
......................................................................................................TATAAATATGTGTAGGTAGAAACTTG...........................................................................................................................	26	0	1	1.00	1	1	0	0	0	0	0
...................................................................TAGGAAATATTGGCAAAAA.....................................................................................................................................................................	19	1	1	1.00	1	1	0	0	0	0	0
...................................................................................AAGCCTGATTCTGTTTTGGA....................................................................................................................................................	20	1	1	1.00	1	1	0	0	0	0	0
...CTGATGAGCAGCCTCCTAAG....................................................................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
............................................................CTTTCCATAGGAAATATTGG...........................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
...........................................................................................................ATATGTGTAGGTAGAAACTTG...........................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
......................................ATGCAGCAATCAGTAAGAG..................................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0
.................................TGGTAATGCAGCAATCAGTAA.....................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
........................................GCAGCAATCAGTAAGAGGAT...............................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
......................................................................................................TATAAATATGTGTAGGTAGAA................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
................................................................................................TTTTGGTATAAATATATGTAG......................................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
..............................................................................................................TGTGTAGGTAGAAACTTGTTTTAAATA..................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
............................................................................TTGGCAAAAGCCTGATTCTG...........................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
...................................................................................................TGGTATGAATACATGTAGGTAG..................................................................................................................................	22	3	2	0.50	1	0	0	1	0	0	0
...........................................................................................................................................................................................................................TCCAGAGAGGCGTGTTCTT.............	19	3	11	0.09	1	0	0	0	0	0	1
.............................................................................................................................................TCGTGGGGAGGTGGATTCC...........................................................................................	19	3	15	0.07	1	0	0	0	1	0	0
.......................................................................AAATATTGGCGAGAGACTG.................................................................................................................................................................	19	3	20	0.05	1	0	0	0	1	0	0

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGGCAAAAGCCTGATTCTGTTTTGGTATAAATATGTGTAGGTAGAAACTTGTTTTAAATAAAAATCTAGGGGAGGTAGATTCCCTATGAAATTTACTAAGCAGAGCACTAGGTACACCTGACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGATTGTA
*******************************************************************..((((.....(((....)))...)))).......................*************************************************************************************************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

SRR902011
testis

V112
male body

GSM444067
head

M040
female body

M022
male body

GSM343916
embryo

..................................................................................................TTGGTATAAATATGTGTAGG.....................................................................................................................................

9.00

...................................................................TAGGAAATATTGGCAAAAGC....................................................................................................................................................................

9.00

................................................................................................TTTTGGTATAAATATGTGTAG......................................................................................................................................

8.00

.....................................................................................................GTATAAATATGTGTAGGTAGA.................................................................................................................................

6.00

........................................................................................................TAAATATGTGTAGGTAGAAAC..............................................................................................................................

5.00

.................................................................................................TTTGGTATAAATATGTGTAG......................................................................................................................................

4.00

......................................ATGCAGCAATCAGTAAGAGGA................................................................................................................................................................................................

4.00

.................................................................................................TTTGGTATAAATATGTGTAGG.....................................................................................................................................

3.00

....................................................................................................GGTATAAATATGTGTAGGTAG..................................................................................................................................

3.00

......ATGAGCAGCCTCCTAAGAATC................................................................................................................................................................................................................................

2.00

..............................................................................................................................TGTTTTAAATAAAAATCTAGG........................................................................................................

2.00

..................................................................................AAAGCCTGATTCTGTTTTGGT....................................................................................................................................................

2.00

.......................................................................................CTGATTCTGTTTTGGTATAA................................................................................................................................................

2.00

.......................................TGCAGCAATCAGTAAGAGG.................................................................................................................................................................................................

2.00

...................................................................TAGGAAATATTGGCAAAAGCC...................................................................................................................................................................

2.00

........................................GCAGCAATCAGTAAGAGGATC..............................................................................................................................................................................................

2.00

.......................................TGCAGCAATCAGTAAGAGGAT...............................................................................................................................................................................................

2.00

CATCTGATGAGCAGCCCCCTA......................................................................................................................................................................................................................................

2.00

....................................TAATGCAGCAATCAGTAAGAG..................................................................................................................................................................................................

2.00

......................................ATGCAGCAATCAGTAAGAGG.................................................................................................................................................................................................

1.00

............................................................................TTGGCAAAAGCCTGATTCTGT..........................................................................................................................................................

1.00

..................................................................................................TTGGTATAAATATGTGTAG......................................................................................................................................

1.00

..TCTGATGAGCAGCCTCCTAA.....................................................................................................................................................................................................................................

1.00

....................................................................AGGAAATATTGGCAAAAGC....................................................................................................................................................................

1.00

.................................................AGTAAGAGGATCTTTCCATAG.....................................................................................................................................................................................

1.00

..................................................................................................TTGGTATAAATATGTGTAGGA....................................................................................................................................

1.00

.....................................AATGCAGCAATCAGTAAGAG..................................................................................................................................................................................................

1.00

.........................................CAGCAATCAGTAAGAGGATC..............................................................................................................................................................................................

1.00

...........................................................................ATTGGCAAAAGCCTGATT..............................................................................................................................................................

1.00

................................................................................................................TGTAGGTAGAAACTTGTTTTA......................................................................................................................

1.00

.....................................AATGCAGCAATCAGTAAGAGG.................................................................................................................................................................................................

1.00

..................................................................ATAGGAAATATTGGCAAAAG.....................................................................................................................................................................

1.00

..................................................................ATAGGAAATATTGGCAAAAGC....................................................................................................................................................................

1.00

...................................................................................................TGGTATGAATAGATGTAGGTAG..................................................................................................................................

1.00

...........................................................................ATTGGCAAAAGCCTGATTCTG...........................................................................................................................................................

1.00

...................................................TAAGAGGATCTTTCCATAGGA...................................................................................................................................................................................

1.00

....................................................................................................GGTATAAATATGTGTAGGTA...................................................................................................................................

1.00

...........................................GCAATCAGTAAGAGGATCTT............................................................................................................................................................................................

1.00

............................CAACATAGTGATGCAGCAATC..........................................................................................................................................................................................................

1.00

.....................................................AGAGGATCTTTCCATAGGAAA.................................................................................................................................................................................

1.00

..........................CCCAACATGGTAATGCAGC..............................................................................................................................................................................................................

1.00

.....GATGAGCAGCCTCCTAAGA...................................................................................................................................................................................................................................

1.00

.........................................CAGCAATCAGTAGGAGGATC..............................................................................................................................................................................................

1.00

......................................................................................................TATAAATATGTGTAGGTAGAAACTTG...........................................................................................................................

1.00

...................................................................TAGGAAATATTGGCAAAAA.....................................................................................................................................................................

1.00

...................................................................................AAGCCTGATTCTGTTTTGGA....................................................................................................................................................

1.00

...CTGATGAGCAGCCTCCTAAG....................................................................................................................................................................................................................................

1.00

............................................................CTTTCCATAGGAAATATTGG...........................................................................................................................................................................

1.00

...........................................................................................................ATATGTGTAGGTAGAAACTTG...........................................................................................................................

1.00

......................................ATGCAGCAATCAGTAAGAG..................................................................................................................................................................................................

1.00

.................................TGGTAATGCAGCAATCAGTAA.....................................................................................................................................................................................................

1.00

........................................GCAGCAATCAGTAAGAGGAT...............................................................................................................................................................................................

1.00

......................................................................................................TATAAATATGTGTAGGTAGAA................................................................................................................................

1.00

................................................................................................TTTTGGTATAAATATATGTAG......................................................................................................................................

1.00

..............................................................................................................TGTGTAGGTAGAAACTTGTTTTAAATA..................................................................................................................

1.00

............................................................................TTGGCAAAAGCCTGATTCTG...........................................................................................................................................................

1.00

...................................................................................................TGGTATGAATACATGTAGGTAG..................................................................................................................................

0.50

...........................................................................................................................................................................................................................TCCAGAGAGGCGTGTTCTT.............

0.09

.............................................................................................................................................TCGTGGGGAGGTGGATTCC...........................................................................................

0.07

.......................................................................AAATATTGGCGAGAGACTG.................................................................................................................................................................

0.05

GTAGACTACTCGTCGGAGGATTCTTAGGGTTGTACCATTACGTCGTTAGTCATTCTCCTAGAAAGGTATCCTTTATAACCGTTTTCGGACTAAGACAAAACCATATTTATACACATCCATCTTTGAACAAAATTTATTTTTAGATCCCCTCCATCTAAGGGATACTTTAAATGATTCGTCTCGTGATCCATGTGGACTGAAACCTCTCTAAAGTAATGTAGATCTCTCCGGAGAAGAACGATCCCTAACAT ***********************************************************************************************************************************..((((.....(((....)))...)))).......................*****************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902011 testis	V112 male body	M040 female body	M022 male body	M062 head	GSM444067 head
...............GAGGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................	20	0	1	17.00	17	17	0	0	0	0	0
.............CGGAGGATTCTTAGGGTTGT..........................................................................................................................................................................................................................	20	0	1	10.00	10	10	0	0	0	0	0
..............GGAGGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................	21	0	1	6.00	6	6	0	0	0	0	0
.............CGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................	21	0	1	6.00	6	6	0	0	0	0	0
..............GGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................	20	0	1	5.00	5	4	0	1	0	0	0
.....CTACTCGTCGGAGGATTCTTA.................................................................................................................................................................................................................................	21	0	1	4.00	4	0	3	0	1	0	0
............................................GTTAGTCATTCTCCTAGAAA...........................................................................................................................................................................................	20	0	1	3.00	3	3	0	0	0	0	0
.............................................TTAGTCATTCTCCTAGAAAGGT........................................................................................................................................................................................	22	0	1	3.00	3	3	0	0	0	0	0
.....CTACTCGTCGGAGGATTCTT..................................................................................................................................................................................................................................	20	0	1	3.00	3	3	0	0	0	0	0
.................GGATTCTTAGGGTTGTACCA......................................................................................................................................................................................................................	20	0	1	3.00	3	3	0	0	0	0	0
................................................GTCATTCTCCTAGAAAGGTA.......................................................................................................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0
.................GGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................	18	0	1	2.00	2	2	0	0	0	0	0
...GACTACTCGTCGGAGGATTC....................................................................................................................................................................................................................................	20	0	1	2.00	2	1	1	0	0	0	0
.............TGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
......TACTCGTCGGAGGATTCTTA.................................................................................................................................................................................................................................	20	0	1	2.00	2	0	2	0	0	0	0
..................GATTCTTAGGGTTGTACCATT....................................................................................................................................................................................................................	21	0	1	2.00	2	2	0	0	0	0	0
.................GGATTCTTAGGGTTGTACC.......................................................................................................................................................................................................................	19	0	1	2.00	2	2	0	0	0	0	0
.........TCGTCGGAGGATTCTTAGGG..............................................................................................................................................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0
...........GTCGGAGGATTCTTAGGGTT............................................................................................................................................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0
.............CGGAGGATTCTTAGGGTTG...........................................................................................................................................................................................................................	19	0	1	2.00	2	2	0	0	0	0	0
...........................GGTTGTACCATTACGTCGTTA...........................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
................................................................................GTTTTCGGACTAAGACAAAACC.....................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0
...............................................TGTCATTCTCCTAGAAAGGTAT......................................................................................................................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
..........CGTCGGAGGATTCTTAGGGTT............................................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
..................................................CATTCTCCTAGAAAGGTATC.....................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
............TTTGAGGATTCTTAGGGTTGTACC.......................................................................................................................................................................................................................	24	2	1	1.00	1	1	0	0	0	0	0
...............GAGGATTCTTAGGGTTGT..........................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0
...........................................CGTTAGTCATTCTCCTAGAAA...........................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
..................................................................................TTTCGGACTAAGACAAAACC.....................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
...................................................................................TTCGGACTAAGACAAAACCAT...................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
......................CTTAGGGTTGTACCATTACGT................................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
............TTGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
..........CGTCGGAGGATTCTTAGGGT.............................................................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
.......................................................................................GACTAAGACAAAACCATATTT...............................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
.............AGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
.............................................TTAGTCATTCTCCTAGAAAG..........................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0
.......................TTAGGGTTGTACCATTACGTC...............................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
................................................................................GTTTTCGGACTAAGACAAA........................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
...............................................AGTCATTCTCCTAGAAAGGTA.......................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
....................................ATTACGTCGTTAGTCATTCT...................................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
............................................GTTAGTCATTCTCCTAGAAAG..........................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
.........................AGGGTTGTACCATTACGTCGT.............................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
.................................................................................TTTTCGGACTAAGACAAAACC.....................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
.............CGGAGGATTCTTAGGGTTGTACC.......................................................................................................................................................................................................................	23	0	1	1.00	1	1	0	0	0	0	0
....................................................TTCTCCTAGAAAGGTATCCTT..................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
.........TTGTCGGAGGATTCTTAGGGT.............................................................................................................................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
..................................................................................TTTCGGACTAAGACAAAACCA....................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0
...........................GGTTGTACCATTACGTCGT.............................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
...CTCTACTCGTCGGAGGATTCTTA.................................................................................................................................................................................................................................	23	2	1	1.00	1	0	0	0	1	0	0
...............GAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0
.................................ACCATTACGTCGTTAGTCA.......................................................................................................................................................................................................	19	0	1	1.00	1	0	0	1	0	0	0
...........GTCGGAGGATTCTTAGGGTTG...........................................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
...........................................AGTTAGTCATTCTCCTAGAAA...........................................................................................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0
GTAGTCTACTCGGCGGAGGA.......................................................................................................................................................................................................................................	20	2	1	1.00	1	0	0	1	0	0	0
.............TGGAGGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
..............................................................................CCGTTTTCGGACTAAGACA..........................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0
....................................................................................................CCATATTAATACAAATTCATCTT................................................................................................................................	23	3	1	1.00	1	0	0	1	0	0	0
.................................................................GTGTCCTTAATAACAGTTTTC.....................................................................................................................................................................	21	3	3	0.33	1	0	0	1	0	0	0
........................................CCTCTTTGGTCATTCTCCTA...............................................................................................................................................................................................	20	3	12	0.17	2	0	0	2	0	0	0
.....................................................................................................................CGTCTTTGAACCAAATTTAAT.................................................................................................................	21	3	9	0.11	1	0	0	0	0	1	0
...................................................GTTCTCCTAGAAAGCTATAC....................................................................................................................................................................................	20	3	12	0.08	1	0	0	0	0	0	1
......................................................................................................................................................................TTAAATGTTTCGGCTAGTG..................................................................	19	3	20	0.05	1	0	1	0	0	0	0

GTAGACTACTCGTCGGAGGATTCTTAGGGTTGTACCATTACGTCGTTAGTCATTCTCCTAGAAAGGTATCCTTTATAACCGTTTTCGGACTAAGACAAAACCATATTTATACACATCCATCTTTGAACAAAATTTATTTTTAGATCCCCTCCATCTAAGGGATACTTTAAATGATTCGTCTCGTGATCCATGTGGACTGAAACCTCTCTAAAGTAATGTAGATCTCTCCGGAGAAGAACGATCCCTAACAT
*************************************************************************************************************************************..((((.....(((....)))...)))).......................*******************************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

SRR902011
testis

V112
male body

M040
female body

M022
male body

M062
head

GSM444067
head

...............GAGGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................

17.00

.............CGGAGGATTCTTAGGGTTGT..........................................................................................................................................................................................................................

10.00

..............GGAGGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................

6.00

.............CGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................

6.00

..............GGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................

5.00

.....CTACTCGTCGGAGGATTCTTA.................................................................................................................................................................................................................................

4.00

............................................GTTAGTCATTCTCCTAGAAA...........................................................................................................................................................................................

3.00

.............................................TTAGTCATTCTCCTAGAAAGGT........................................................................................................................................................................................

3.00

.....CTACTCGTCGGAGGATTCTT..................................................................................................................................................................................................................................

3.00

.................GGATTCTTAGGGTTGTACCA......................................................................................................................................................................................................................

3.00

................................................GTCATTCTCCTAGAAAGGTA.......................................................................................................................................................................................

2.00

.................GGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................

2.00

...GACTACTCGTCGGAGGATTC....................................................................................................................................................................................................................................

2.00

.............TGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................

2.00

......TACTCGTCGGAGGATTCTTA.................................................................................................................................................................................................................................

2.00

..................GATTCTTAGGGTTGTACCATT....................................................................................................................................................................................................................

2.00

.................GGATTCTTAGGGTTGTACC.......................................................................................................................................................................................................................

2.00

.........TCGTCGGAGGATTCTTAGGG..............................................................................................................................................................................................................................

2.00

...........GTCGGAGGATTCTTAGGGTT............................................................................................................................................................................................................................

2.00

.............CGGAGGATTCTTAGGGTTG...........................................................................................................................................................................................................................

2.00

...........................GGTTGTACCATTACGTCGTTA...........................................................................................................................................................................................................

1.00

................................................................................GTTTTCGGACTAAGACAAAACC.....................................................................................................................................................

1.00

...............................................TGTCATTCTCCTAGAAAGGTAT......................................................................................................................................................................................

1.00

..........CGTCGGAGGATTCTTAGGGTT............................................................................................................................................................................................................................

1.00

..................................................CATTCTCCTAGAAAGGTATC.....................................................................................................................................................................................

1.00

............TTTGAGGATTCTTAGGGTTGTACC.......................................................................................................................................................................................................................

1.00

...............GAGGATTCTTAGGGTTGT..........................................................................................................................................................................................................................

1.00

...........................................CGTTAGTCATTCTCCTAGAAA...........................................................................................................................................................................................

1.00

..................................................................................TTTCGGACTAAGACAAAACC.....................................................................................................................................................

1.00

...................................................................................TTCGGACTAAGACAAAACCAT...................................................................................................................................................

1.00

......................CTTAGGGTTGTACCATTACGT................................................................................................................................................................................................................

1.00

............TTGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................

1.00

..........CGTCGGAGGATTCTTAGGGT.............................................................................................................................................................................................................................

1.00

.......................................................................................GACTAAGACAAAACCATATTT...............................................................................................................................................

1.00

.............AGGAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................

1.00

.............................................TTAGTCATTCTCCTAGAAAG..........................................................................................................................................................................................

1.00

.......................TTAGGGTTGTACCATTACGTC...............................................................................................................................................................................................................

1.00

................................................................................GTTTTCGGACTAAGACAAA........................................................................................................................................................

1.00

...............................................AGTCATTCTCCTAGAAAGGTA.......................................................................................................................................................................................

1.00

....................................ATTACGTCGTTAGTCATTCT...................................................................................................................................................................................................

1.00

............................................GTTAGTCATTCTCCTAGAAAG..........................................................................................................................................................................................

1.00

.........................AGGGTTGTACCATTACGTCGT.............................................................................................................................................................................................................

1.00

.................................................................................TTTTCGGACTAAGACAAAACC.....................................................................................................................................................

1.00

.............CGGAGGATTCTTAGGGTTGTACC.......................................................................................................................................................................................................................

1.00

....................................................TTCTCCTAGAAAGGTATCCTT..................................................................................................................................................................................

1.00

.........TTGTCGGAGGATTCTTAGGGT.............................................................................................................................................................................................................................

1.00

..................................................................................TTTCGGACTAAGACAAAACCA....................................................................................................................................................

1.00

...........................GGTTGTACCATTACGTCGT.............................................................................................................................................................................................................

1.00

...CTCTACTCGTCGGAGGATTCTTA.................................................................................................................................................................................................................................

1.00

...............GAGGATTCTTAGGGTTGTA.........................................................................................................................................................................................................................

1.00

.................................ACCATTACGTCGTTAGTCA.......................................................................................................................................................................................................

1.00

...........GTCGGAGGATTCTTAGGGTTG...........................................................................................................................................................................................................................

1.00

...........................................AGTTAGTCATTCTCCTAGAAA...........................................................................................................................................................................................

1.00

GTAGTCTACTCGGCGGAGGA.......................................................................................................................................................................................................................................

1.00

.............TGGAGGATTCTTAGGGTTGTAC........................................................................................................................................................................................................................

1.00

..............................................................................CCGTTTTCGGACTAAGACA..........................................................................................................................................................

1.00

....................................................................................................CCATATTAATACAAATTCATCTT................................................................................................................................

1.00

.................................................................GTGTCCTTAATAACAGTTTTC.....................................................................................................................................................................

0.33

........................................CCTCTTTGGTCATTCTCCTA...............................................................................................................................................................................................

0.17

.....................................................................................................................CGTCTTTGAACCAAATTTAAT.................................................................................................................

0.11

...................................................GTTCTCCTAGAAAGCTATAC....................................................................................................................................................................................

0.08

......................................................................................................................................................................TTAAATGTTTCGGCTAGTG..................................................................

0.05

Species	Coordinate	ID	Alignment
dp5	4_group3:1993868-1994118 +	dps_1506	CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGGCAAAAGCCTGATTCTGTTTTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGAAACTTGTT-TTAAATAAAAATCTAGGGGAGGTAGATTCCCTATGAAATTTACTAAGCAGAGCACTAGGTACACCTGACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGATTGTA
droPer2	scaffold_1:3469103-3469440 +		CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGACAAAAGCCTGATTCTGTTTTGGTATAACGGGCCTTTTTTTCACAACAGGCCGAAACCGGCCTAAGTGTGACGGGTTCCGAGCGAGCCCGGCAGCCGCCTCAACCTAACCTAACCTATATGTAGGTAGAAACTTGTTTTTACATAAGAATCTAGGGAAGGTAGATTCCATATGAAATTTACTAAGCAGAGCACCAGGTACACCTAACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGAATGTA

Species

Coordinate

Alignment

dp5

4_group3:1993868-1994118 +

dps_1506

CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGGCAAAAGCCTGATTCTGTTTTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGAAACTTGTT-TTAAATAAAAATCTAGGGGAGGTAGATTCCCTATGAAATTTACTAAGCAGAGCACTAGGTACACCTGACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGATTGTA

droPer2

scaffold_1:3469103-3469440 +

CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGACAAAAGCCTGATTCTGTTTTGGTATAACGGGCCTTTTTTTCACAACAGGCCGAAACCGGCCTAAGTGTGACGGGTTCCGAGCGAGCCCGGCAGCCGCCTCAACCTAACCTAACCTATATGTAGGTAGAAACTTGTTTTTACATAAGAATCTAGGGAAGGTAGATTCCATATGAAATTTACTAAGCAGAGCACCAGGTACACCTAACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGAATGTA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

dp5

CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGGCAAAAGCCTGATTCTGTTTTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGAAACTTGTT-TTAAATAAAAATCTAGGGGAGGTAGATTCCCTATGAAATTTACTAAGCAGAGCACTAGGTACACCTGACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGATTGTA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................................................................................TTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAGG......................................................................................................................................	20	1	9.00	9	0	0	0	0	0	1	1	0	7	0
...................................................................TAGGAAATATTGGCAAAAGC...........................................................................................................................................................................................................................................................	20	1	9.00	9	0	0	0	0	0	0	0	0	9	0
................................................................................................TTTTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAG.......................................................................................................................................	21	1	8.00	8	0	0	0	0	0	0	0	0	8	0
.....................................................................................................GTATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGA..................................................................................................................................	21	1	6.00	6	0	0	0	0	0	0	1	0	5	0
........................................................................................................TAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGAAAC...............................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	2	0	3	0
.................................................................................................TTTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAG.......................................................................................................................................	20	1	4.00	4	0	0	0	0	0	0	0	0	4	0
......................................ATGCAGCAATCAGTAAGAGGA.......................................................................................................................................................................................................................................................................................	21	1	4.00	4	0	1	0	0	0	0	1	0	2	0
.................................................................................................TTTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAGG......................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	3	0
....................................................................................................GGTATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAG...................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	3	0
......ATGAGCAGCCTCCTAAGAATC.......................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	1	0	1	0
....................................................................................................................................................................................................................TGTT-TTAAATAAAAATCTAGG........................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..................................................................................AAAGCCTGATTCTGTTTTGGT...........................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................CTGATTCTGTTTTGGTATAA--------------------------------------------------------------------------------------.................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.......................................TGCAGCAATCAGTAAGAGG........................................................................................................................................................................................................................................................................................	19	1	2.00	2	1	0	0	0	0	0	0	0	1	0
...................................................................TAGGAAATATTGGCAAAAGCC..........................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	0	0	0	0	0	1	0
........................................GCAGCAATCAGTAAGAGGATC.....................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0
.......................................TGCAGCAATCAGTAAGAGGAT......................................................................................................................................................................................................................................................................................	21	1	2.00	2	1	0	0	0	0	0	1	0	0	0
....................................TAATGCAGCAATCAGTAAGAG.........................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0
......................................ATGCAGCAATCAGTAAGAGG........................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
............................................................................TTGGCAAAAGCCTGATTCTGT.................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................TTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAG.......................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..TCTGATGAGCAGCCTCCTAA............................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
....................................................................AGGAAATATTGGCAAAAGC...........................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.................................................AGTAAGAGGATCTTTCCATAG............................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..................................................................................................TTGGTATAA--------------------------------------------------------------------------------------ATATGTGTAGGA.....................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................AATGCAGCAATCAGTAAGAG.........................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.........................................CAGCAATCAGTAAGAGGATC.....................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...........................................................................ATTGGCAAAAGCCTGATT.....................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGTAGGTAGAAACTTGTT-TTA......................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................AATGCAGCAATCAGTAAGAGG........................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..................................................................ATAGGAAATATTGGCAAAAG............................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..................................................................ATAGGAAATATTGGCAAAAGC...........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...........................................................................ATTGGCAAAAGCCTGATTCTG..................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................TAAGAGGATCTTTCCATAGGA..........................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
....................................................................................................GGTATAA--------------------------------------------------------------------------------------ATATGTGTAGGTA....................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...........................................GCAATCAGTAAGAGGATCTT...................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................................AGAGGATCTTTCCATAGGAAA........................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..........................CCCAACATGGTAATGCAGC.....................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.....GATGAGCAGCCTCCTAAGA..........................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................TATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGAAACTTG............................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................................TAGGAAATATTGGCAAAAA............................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................................................AAGCCTGATTCTGTTTTGGA...........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...CTGATGAGCAGCCTCCTAAG...........................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
............................................................CTTTCCATAGGAAATATTGG..................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................ATATGTGTAGGTAGAAACTTG............................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
......................................ATGCAGCAATCAGTAAGAG.........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................TGGTAATGCAGCAATCAGTAA............................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................................GCAGCAATCAGTAAGAGGAT......................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
......................................................................................................TATAA--------------------------------------------------------------------------------------ATATGTGTAGGTAGAA.................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................TGTGTAGGTAGAAACTTGTT-TTAAATA..................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	1	0
............................................................................TTGGCAAAAGCCTGATTCTG..................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0

droPer2

CATCTGATGAGCAGCCTCCTAAGAATCCCAACATGGTAATGCAGCAATCAGTAAGAGGATCTTTCCATAGGAAATATTGACAAAAGCCTGATTCTGTTTTGGTATAACGGGCCTTTTTTTCACAACAGGCCGAAACCGGCCTAAGTGTGACGGGTTCCGAGCGAGCCCGGCAGCCGCCTCAACCTAACCTAACCTATATGTAGGTAGAAACTTGTTTTTACATAAGAATCTAGGGAAGGTAGATTCCATATGAAATTTACTAAGCAGAGCACCAGGTACACCTAACTTTGGAGAGATTTCATTACATCTAGAGAGGCCTCTTCTTGCTAGGGAATGTA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................................................................................................................................................GAGCGAGCCCGGCAGCCG..................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0

dps_1506

4_group3:1993918-1994068 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-4.1	-4.0	-3.8