ID:

dps_1451

 Coordinate:

4_group2:562212-562362 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.9 -5.6 -5.3

Flybase annnotation

exon [dpse_GLEANR_6787:2]; CDS [Dpse\GA27727-cds]; intron [Dpse\GA27727-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
  1. Unknown_singleton_1069:1267-1286 -
  2. Unknown_singleton_1069:2897-2916 -
  3. 4_group2:560953-560972 -
  4. dps_1451  4_group2:562337-562356 -
star
  1. Unknown_singleton_1069:1234-1253 -
  2. Unknown_singleton_1069:2864-2883 -
  3. dps_1451  4_group2:562304-562323 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGGTCACGCCCCAAGAGCTTAATGCCGCCGGCAAGGACTTCAAGAGTCTGTGCGTCGAGATATTGGACTGAAAAATTGTTAAAATTTTGCCAAGTATTCATAATTCTCCCAATTTTTCCCCAATTCCGCAATCCCCAATAGAAATTCAACCTTTACCCCTTTTTTTTGCTCTCTCTGCATGTGTGTGTGCGTGTGTGCGTGTGTGGATTGTAGCGCCTCAATGAAACCCTGCTGTGTTTGTAGCGGCGGC
********************************************************.((((...((((((..((((((.....))))))....)))..)))....))))********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 M022
male body		 SRR902012
CNS imaginal disc
 M062
head
 GSM343916
embryo
 GSM444067
head
........................................................CGAGATATTGGACTGAAAAA............................................................................................................................................................................... 20 0 4 63.75 255 255 0 0 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAAAAA............................................................................................................................................................................... 21 0 4 25.50 102 101 0 0 1 0 0 0 0
........................................................CGAGATATTGGACTGAAAA................................................................................................................................................................................ 19 0 4 18.75 75 75 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAAT.............................................................................................................................................................................. 21 0 4 9.50 38 37 1 0 0 0 0 0 0
..........................................................AGATATTGGACTGAAAAATTG............................................................................................................................................................................ 21 0 5 9.20 46 45 0 1 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAAAA................................................................................................................................................................................ 20 0 4 8.50 34 33 0 0 1 0 0 0 0
..........................................................AGATATTGGACTGAAAAATT............................................................................................................................................................................. 20 0 5 7.20 36 36 0 0 0 0 0 0 0
................................................CTGTGCGTCGAGATATTGG........................................................................................................................................................................................ 19 0 4 4.75 19 14 4 0 0 0 1 0 0
........................................................CGAGATATTGGACTGAAAAATT............................................................................................................................................................................. 22 0 4 4.75 19 18 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GCGTGTGTGGATTGTAGCGC.................................. 20 0 3 4.33 13 12 1 0 0 0 0 0 0
.............................................................TATTGGACTGAAAAATTGTTA......................................................................................................................................................................... 21 0 5 4.20 21 21 0 0 0 0 0 0 0
................................................CTGTGCGTCGAGATATTGGA....................................................................................................................................................................................... 20 0 4 3.75 15 12 2 0 1 0 0 0 0
..................................................GTGCGTCGAGATATTGGACTG.................................................................................................................................................................................... 21 0 4 3.25 13 13 0 0 0 0 0 0 0
...............................................................TTGGACTGAAAAATTGTTAAA....................................................................................................................................................................... 21 0 4 3.25 13 13 0 0 0 0 0 0 0
...........................................................GATATTGGACTGAAAAATTG............................................................................................................................................................................ 20 0 5 3.20 16 14 0 2 0 0 0 0 0
.....................................................CGTCGAGATATTGGACTGAA.................................................................................................................................................................................. 20 0 4 2.75 11 11 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCGTGTGTGGATTGTAGC.................................... 18 0 3 2.33 7 7 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCGTGTGTGGATTGTAGCG................................... 19 0 3 2.33 7 7 0 0 0 0 0 0 0
...................................................TGCGTCGAGATATTGGACTGA................................................................................................................................................................................... 21 0 4 2.25 9 8 0 0 1 0 0 0 0
........................................................CGAGATATTGGACTGAAAAAA.............................................................................................................................................................................. 21 1 4 2.25 9 9 0 0 0 0 0 0 0
..........................................................AGATATTGGACTGAAAAAT.............................................................................................................................................................................. 19 0 5 2.00 10 10 0 0 0 0 0 0 0
............................................................ATATTGGACTGAAAAATTG............................................................................................................................................................................ 19 0 5 2.00 10 9 0 1 0 0 0 0 0
...............................................................TTGGACTGAAAAATTGTTAA........................................................................................................................................................................ 20 0 4 2.00 8 8 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTGCGTGTGTGGATTGTAGC.................................... 20 0 3 1.67 5 5 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATA............................................................................................................................................................................. 22 1 4 1.50 6 6 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGCGTGTGTGGATTGTAGC.................................... 19 0 3 1.33 4 4 0 0 0 0 0 0 0
..............................................................ATTGGACTGAAAAATTGTTAAA....................................................................................................................................................................... 22 0 4 1.25 5 5 0 0 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAAA................................................................................................................................................................................. 19 0 4 1.25 5 5 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAA................................................................................................................................................................................. 18 0 4 1.00 4 4 0 0 0 0 0 0 0
...............................................................TTGGACTGAAAAATTGTTAAAA...................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................TGTGCGTCGAGATATTGGACT..................................................................................................................................................................................... 21 0 4 1.00 4 1 2 0 1 0 0 0 0
.........................................................GAGATATTGGACTGAAAAATT............................................................................................................................................................................. 21 0 5 1.00 5 5 0 0 0 0 0 0 0
.............................................................TATTGGACTGAAAAATTGTT.......................................................................................................................................................................... 20 0 5 1.00 5 4 1 0 0 0 0 0 0
...........................................................GATATTGGACTGAAAAATT............................................................................................................................................................................. 19 0 5 1.00 5 5 0 0 0 0 0 0 0
............................................................ATATTGGACTGAAAAATTGTT.......................................................................................................................................................................... 21 0 5 0.80 4 3 1 0 0 0 0 0 0
.........................................................GAGATATTGGACTGAAAAA............................................................................................................................................................................... 19 0 5 0.80 4 4 0 0 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAAAAAA.............................................................................................................................................................................. 22 1 4 0.75 3 3 0 0 0 0 0 0 0
...................................................TGCGTCGAGATATTGGACTGAA.................................................................................................................................................................................. 22 0 4 0.75 3 2 0 0 1 0 0 0 0
......................................................GTCGAGATATTGGACTGAAA................................................................................................................................................................................. 20 0 4 0.75 3 3 0 0 0 0 0 0 0
................................................CTGTGCGTCGAGATATTGGAC...................................................................................................................................................................................... 21 0 4 0.75 3 1 0 2 0 0 0 0 0
.................................................TGTGCGTCGAGATATTGGA....................................................................................................................................................................................... 19 0 4 0.75 3 3 0 0 0 0 0 0 0
.............................................................TATTGGACTGAAAAATTGTTAA........................................................................................................................................................................ 22 0 4 0.75 3 3 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATTT............................................................................................................................................................................ 23 1 4 0.75 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGCGTGTGTGGATTGTAGCGC.................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGCGTGTGTGGATTGTAG..................................... 18 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGCGTGTGTGGATTGTAGCG................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTGTGCGTGTGTGGATTGTAGC.................................... 22 0 3 0.67 2 0 0 0 0 2 0 0 0
...........................................................GATATTGGACTGAAAAATTGT........................................................................................................................................................................... 21 0 5 0.60 3 3 0 0 0 0 0 0 0
..........................................................AGATATTGGACTGAAAAATTGT........................................................................................................................................................................... 22 0 5 0.60 3 3 0 0 0 0 0 0 0
.........................................................GAGATATTGGACTGAAAAATTG............................................................................................................................................................................ 22 0 5 0.60 3 3 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGGAAAA............................................................................................................................................................................... 20 1 4 0.50 2 2 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATTTTCAG........................................................................................................................................................................ 27 3 4 0.50 2 2 0 0 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAA.................................................................................................................................................................................. 18 0 4 0.50 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTGTAGCGCCTCAATGAAAC....................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................CCGCCGGCAAGGACTTCAAG.............................................................................................................................................................................................................. 20 0 4 0.50 2 2 0 0 0 0 0 0 0
.....................................................CGTCGAGATATTGGACTGAAA................................................................................................................................................................................. 21 0 4 0.50 2 1 0 0 1 0 0 0 0
......................................................GTCGAGATATTGGACTGAAAA................................................................................................................................................................................ 21 0 4 0.50 2 2 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATTTA........................................................................................................................................................................... 24 2 4 0.50 2 2 0 0 0 0 0 0 0
..................................................GTGCGTCGAGATATTGGAC...................................................................................................................................................................................... 19 0 4 0.50 2 2 0 0 0 0 0 0 0
..................................................GTGCGTCGAGATATTGGA....................................................................................................................................................................................... 18 0 4 0.50 2 2 0 0 0 0 0 0 0
................................................................TGGACTGAAAAATTGTTAAA....................................................................................................................................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0
...................................................................................AATTTTAACAAGTATTCATAA................................................................................................................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0 0
............................................................ATATTGGACTGAAAAATTGTTTT........................................................................................................................................................................ 23 2 5 0.40 2 2 0 0 0 0 0 0 0
.........................................................GAGATATTGGACTGAAAAAT.............................................................................................................................................................................. 20 0 5 0.40 2 2 0 0 0 0 0 0 0
...........................................................GATATTGGACTGAAAAAT.............................................................................................................................................................................. 18 0 5 0.40 2 2 0 0 0 0 0 0 0
..........................................................AGATATTTGACTGAAAAATTG............................................................................................................................................................................ 21 1 5 0.40 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGTGCGTGTGTGGATTGTAGCG................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................CGTGTGTGGATTGTAGCGC.................................. 19 0 3 0.33 1 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................TGTGTGGATTGTAGCGCCTCA.............................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................TGTGTGCCAGTGCGGATTGTAGC.................................... 23 3 3 0.33 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................CGTGTGTGGATTGTAGCGCTTA............................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTGCGTGTGTGGATTGTAGCGC.................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTGTGTGGATTGTAGCGCC................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................GCCAAGTATTCATAATTCTC.............................................................................................................................................. 20 0 3 0.33 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TGTGCGTGTGTGGATTGTAGC.................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
GAGGTCACGCCCCAAGAGC........................................................................................................................................................................................................................................ 19 0 3 0.33 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................GTGTGCGTGTGTGGATTGTAG..................................... 21 0 3 0.33 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................GCGTGTGTGGGTTGTAGCGC.................................. 20 1 3 0.33 1 0 1 0 0 0 0 0 0
....................................................GCGTCGAGATATTGGACTGAAAAATTG............................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGGGATATTGGACTGAAAAATT............................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATTTTTA......................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0
...................................................TGCGTCGAGATATTGGACTG.................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAAAAATTGTTAAA....................................................................................................................................................................... 29 0 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................ATTGGACTGAAAAATTGTTAA........................................................................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGACATTGGACTGAAAA................................................................................................................................................................................ 19 1 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................................................TATTCATAATTCTCCCAATT........................................................................................................................................ 20 0 4 0.25 1 1 0 0 0 0 0 0 0
................................................CTGTGCGTCGAGATATTGGACTGAAA................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0
....................................................................................................ATAATTCTCCCAATTTTTCC................................................................................................................................... 20 0 4 0.25 1 0 0 1 0 0 0 0 0
.................................................................................................TTCATAATTCTCCCAATTTT...................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATC............................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGTTATTGGACTGAAAAA............................................................................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATTG............................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATCAT........................................................................................................................................................................... 24 2 4 0.25 1 1 0 0 0 0 0 0 0
.................................................TGTGCGTCGAGATATTGGAC...................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAATAA............................................................................................................................................................................ 23 2 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................TCGAGATATTGGACTGAAAAATT............................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
....................................................GCGTCGAGATATTGGACTG.................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................CGTCGAGATATTGGACTGAAAAA............................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................TAATTCTCCCAATTTTTCCCT................................................................................................................................. 21 1 4 0.25 1 1 0 0 0 0 0 0 0
........................................................CGAGATATTGGACTGAAAAAAAA............................................................................................................................................................................ 23 3 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................TCAAGATATTGGACTGAAAAA............................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................GATATTGGACTGAAAAATTGTTTTT....................................................................................................................................................................... 25 3 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................AGATATTGGACTGAAAAATTGTT.......................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................GAGATATTGGACTGAAAAATTTT........................................................................................................................................................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................GATATTGGACTGAAAAAA.............................................................................................................................................................................. 18 1 5 0.20 1 1 0 0 0 0 0 0 0
......................ATGCCGCCGGCAAGGACTT.................................................................................................................................................................................................................. 19 0 5 0.20 1 0 0 1 0 0 0 0 0
.............................................................TATTGGACTGAAAAAT.............................................................................................................................................................................. 16 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................AATGCCGCCGGCAAGGACTTCT................................................................................................................................................................................................................ 22 1 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................GAGATATTGGACTGAAAAAA.............................................................................................................................................................................. 20 1 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................AGATATTGGACTGAAAAATTGA........................................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................AGATATTGGACTGAAAAATTCT........................................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0
...................................................GTCGTCGAGATATTGGACT..................................................................................................................................................................................... 19 2 5 0.20 1 0 1 0 0 0 0 0 0
...............................................................TTGGACTGAAAAATTGTT.......................................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................GAGATATTGGACTGAAAAATTT............................................................................................................................................................................ 22 1 5 0.20 1 1 0 0 0 0 0 0 0
............................................................AGATTGGACTGAAAAATTG............................................................................................................................................................................ 19 1 5 0.20 1 1 0 0 0 0 0 0 0
.....................AGTGCCGCCGGCAAGGACTTCT................................................................................................................................................................................................................ 22 2 5 0.20 1 0 0 0 0 0 1 0 0
...............................................................TTGGACTGAAAAATTGTTA......................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0
............................................................ATATTGGACTGAAAAATTGT........................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................GATATTGGACTGAAAAATTGTT.......................................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0
............................................................ATATTGGACTGAAAAATTGC........................................................................................................................................................................... 20 1 5 0.20 1 0 0 0 0 0 1 0 0
..........................................................AGATATTGGACTGAAAAATA............................................................................................................................................................................. 20 1 6 0.17 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

CTCCAGTGCGGGGTTCTCGAATTACGGCGGCCGTTCCTGAAGTTCTCAGACACGCAGCTCTATAACCTGACTTTTTAACAATTTTAAAACGGTTCATAAGTATTAAGAGGGTTAAAAAGGGGTTAAGGCGTTAGGGGTTATCTTTAAGTTGGAAATGGGGAAAAAAAACGAGAGAGACGTACACACACACGCACACACGCACACACCTAACATCGCGGAGTTACTTTGGGACGACACAAACATCGCCGCCG
**********************************************************************************************************************************************.((((...((((((..((((((.....))))))....)))..)))....))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M022
male body		 M040
female body
 M062
head
 GSM444067
head
 M059
embryo
 GSM343916
embryo
.......................................AAGTTCTCAGACACGCAGCT................................................................................................................................................................................................ 20 0 1 22.00 22 21 0 1 0 0 0 0 0
......................................GAAGTTCTCAGACACGCAGC................................................................................................................................................................................................. 20 0 1 11.00 11 11 0 0 0 0 0 0 0
......................................AAAGTTCTCAGACACGCAGCT................................................................................................................................................................................................ 21 1 1 7.00 7 7 0 0 0 0 0 0 0
.......................................AAGTTCTCAGACACGCAGC................................................................................................................................................................................................. 19 0 1 5.00 5 5 0 0 0 0 0 0 0
...............................................................................................ATAAGTATTAAGAGGGTTAAA....................................................................................................................................... 21 0 4 4.25 17 17 0 0 0 0 0 0 0
...............................................AGACACGCAGCTCTATAACC........................................................................................................................................................................................ 20 0 2 4.00 8 5 2 0 1 0 0 0 0
........................................AGTTCTCAGACACGCAGCTC............................................................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0
.....................................TGAAGTTCTCAGACACGCA................................................................................................................................................................................................... 19 0 1 3.00 3 2 0 1 0 0 0 0 0
.........................................GTTCTCAGACACGCAGCTCTATAA.......................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................................GTATTAAGAGGGTTAAAAAG.................................................................................................................................... 20 0 4 2.25 9 5 4 0 0 0 0 0 0
.....................................TGAAGTTCTCAGACACGCAGC................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................AAAGTTCTCAGACACGCAGC................................................................................................................................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0 0
......................................AAAGTTCTCAGACACGCAGCTC............................................................................................................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0
..........................................TTCTCAGACACGCAGCTCTAT............................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0
...........................................TCTCAGACACGCAGCTCTATA........................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................GTTCTCAGACACGCAGCTCT.............................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0
........................................AGTTCTCAGACACGCAGCT................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0
...............................................AGACACGCAGCTCTATAACCT....................................................................................................................................................................................... 21 0 2 1.50 3 3 0 0 0 0 0 0 0
............GTTCTCGAATTACGGCGGCC........................................................................................................................................................................................................................... 20 0 2 1.50 3 2 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TTACTTTGGGAGGACATAA............ 19 2 3 1.33 4 0 3 0 1 0 0 0 0
..................................................................................................AGTATTAAGAGGGTTAAAAAG.................................................................................................................................... 21 0 4 1.25 5 3 2 0 0 0 0 0 0
........................................................GCTCTATAACCTGACTTTTTA.............................................................................................................................................................................. 21 0 4 1.25 5 4 1 0 0 0 0 0 0
...........................................................CTATAACCTGACTTTTTAAC............................................................................................................................................................................ 20 0 5 1.20 6 6 0 0 0 0 0 0 0
.........................................TTTCTCAGACACGCAGCTCTAT............................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................AAAAGTTCTCAGACACGCAGC................................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.........GGGGTTCTCGAATTACGGCGG............................................................................................................................................................................................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0
.....GTGCGGGGTTCTCGAATTACG................................................................................................................................................................................................................................. 21 0 2 1.00 2 0 2 0 0 0 0 0 0
...................................CCTGAAGTTCTCAGACACGCAGC................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................GGGGTTAAGGCGTTAGGGGT................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................AGTTCTCAGACACGCAGCTCT.............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................GGGGTTAAGGCGTTAGGGG.................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
........CGGGGTTCTCGAATTACGGC............................................................................................................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................................AACGGTTCATAAGTATTAAGAG.............................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................GGCGGCCGTTCCGGAAGTTCTCAGAC........................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGGGTTAAGGCGTTAGGGGT................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...CAGTGCGGGGTTCTCGAATT.................................................................................................................................................................................................................................... 20 0 2 1.00 2 0 0 0 2 0 0 0 0
.................................................................................................AAGTATTAAGAGGGTTAAAAA..................................................................................................................................... 21 0 4 1.00 4 3 1 0 0 0 0 0 0
..............................................................................................................................................................................................................CTAACATCGCGGAGTTACTTTG....................... 22 0 2 1.00 2 2 0 0 0 0 0 0 0
..........................CCGGCCGTTCCTGAAGTTCTCAGA......................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0
......................................GAAGTTCTCAGACACGCAGCT................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................CTGACTTTTTAACAATTTT...................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................TGAAGTTCTCAGACACGCAGCT................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................CGAAGTTCTCAGACACGCA................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................AGACACGCAGCTCTATAAC......................................................................................................................................................................................... 19 0 2 1.00 2 2 0 0 0 0 0 0 0
........................................AGTTCTCAGACACGCAGC................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................AAACGGTTCATAAGTATTAAGA............................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................ACGGCGGCCGTTCCTGAAGTT............................................................................................................................................................................................................... 21 0 5 0.80 4 2 1 0 1 0 0 0 0
......................TACGGCGGCCGTTCCTGAAGT................................................................................................................................................................................................................ 21 0 5 0.80 4 4 0 0 0 0 0 0 0
.............................................................................................TCATAAGTATTAAGAGGGTTAAAAAG.................................................................................................................................... 26 0 4 0.75 3 3 0 0 0 0 0 0 0
...............................................................................................ATAAGTATTAAGAGGGTTAA........................................................................................................................................ 20 0 4 0.75 3 3 0 0 0 0 0 0 0
................................................................................................TAAGTATTAAGAGGGTTAAAA...................................................................................................................................... 21 0 4 0.75 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................................................CACGCACACACCTAACATCGC................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
..........................................................................................GGTTCATAAGTATTAAGAG.............................................................................................................................................. 19 0 3 0.67 2 0 0 2 0 0 0 0 0
..........................................................................................GGTTCATAAGTATTAAGAGG............................................................................................................................................. 20 0 3 0.67 2 1 0 1 0 0 0 0 0
CTCCAGTGCGGGGTTCTCGA....................................................................................................................................................................................................................................... 20 0 3 0.67 2 0 0 0 1 1 0 0 0
.......GCGGGGTTCTCGAATTACGGCGGCCGT......................................................................................................................................................................................................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0
.........................GGCGGCCGTTCCTGAAGTTC.............................................................................................................................................................................................................. 20 0 4 0.50 2 0 2 0 0 0 0 0 0
...........................................................................................GTTCATAAGTATTAAGAGGGTTAAAAA..................................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0 0 0 0
.................................................................................................AAGTATTAAGAGGGTTAAAA...................................................................................................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0
..............................................................................................CATAAGTATTAAGAGGGTTAA........................................................................................................................................ 21 0 4 0.50 2 2 0 0 0 0 0 0 0
..............................................CAGACACGCAGCTCTATAACC........................................................................................................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0
................................................................ACCTGACTTTTTAACAATTT....................................................................................................................................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0
...............CTCGAATTACGGCGGCCGTT........................................................................................................................................................................................................................ 20 0 2 0.50 1 0 0 1 0 0 0 0 0
CTCCAGTGCGGGGTTCTCGAAA..................................................................................................................................................................................................................................... 22 1 2 0.50 1 0 0 0 0 1 0 0 0
...........GGTTCTCGAATTACGGCGGCCGTT........................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
..........GGGTTCTCCAATTACGGCGGC............................................................................................................................................................................................................................ 21 1 2 0.50 1 0 0 0 1 0 0 0 0
.............................................................................................TCATAAGTATTAAGAGGGTT.......................................................................................................................................... 20 0 4 0.50 2 1 0 1 0 0 0 0 0
........CGGGGTTCTCGAATTACGGCG.............................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.TCCCGTGCGGGGTTCTCGAA...................................................................................................................................................................................................................................... 20 1 2 0.50 1 0 0 0 0 0 1 0 0
.TCCAGTGCGGGGTTCTCGAAT..................................................................................................................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................GCGGAGTTACTTTGGGACGA................. 20 0 2 0.50 1 0 1 0 0 0 0 0 0
...............CTCGAATTACGGCGGCCGT......................................................................................................................................................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0 0 0
..................GAATTACGGCGGCCGTTCCTGA................................................................................................................................................................................................................... 22 0 2 0.50 1 0 0 0 1 0 0 0 0
.............CTCTCGAATTACGGCGGCCGTT........................................................................................................................................................................................................................ 22 1 2 0.50 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TTACTTTGGGAGGACATAAA........... 20 2 2 0.50 1 0 1 0 0 0 0 0 0
..............................................AAGACACGCAGCTCTATAACCT....................................................................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0
.......GCGGGGTTCTCGAATTACG................................................................................................................................................................................................................................. 19 0 2 0.50 1 0 0 0 1 0 0 0 0
.....GTGCGGGGTTCTCGAATTAC.................................................................................................................................................................................................................................. 20 0 2 0.50 1 0 1 0 0 0 0 0 0
...............CTCGAATTACGGCGGCCGTTC....................................................................................................................................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0
..CCAGTGCGGGGTTCTCGAAT..................................................................................................................................................................................................................................... 20 0 2 0.50 1 0 0 0 1 0 0 0 0
........................CGGCGGCCGTTCCTGAAGTT............................................................................................................................................................................................................... 20 0 5 0.40 2 0 1 0 0 0 1 0 0
.........................................................CTCTATAACCTGACTTTTTAA............................................................................................................................................................................. 21 0 5 0.40 2 1 1 0 0 0 0 0 0
..........................................................................................GGTTCATAAGTATTAAGA............................................................................................................................................... 18 0 3 0.33 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................CACACGCACACACCTAACATC..................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................................AAAAAAATCGAGAGAGGCGT....................................................................... 20 2 3 0.33 1 0 0 0 1 0 0 0 0
..........................................................................................GGTTCATAAGTATTAAGAGGG............................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................CGGTTCATAAGTATTAAGAG.............................................................................................................................................. 20 0 3 0.33 1 0 0 0 1 0 0 0 0
................................................................................................TAAGTATTAAGAGGGTTAA........................................................................................................................................ 19 0 4 0.25 1 0 1 0 0 0 0 0 0
...................................................ACGCAGCTCTATAACCTGACT................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................................................AAAAGTATTAAGAGGGTTAAAAA..................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTACTTTGGGAGGACATAAAA.......... 21 3 4 0.25 1 0 1 0 0 0 0 0 0
.....................................................................................................ATTAAGAGGGTTAAAAAGGG.................................................................................................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0
................................................................................................TAAGTATTAAGAGGGTTAAA....................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................CAGCTCTATAACCTGACTTTT................................................................................................................................................................................ 21 0 4 0.25 1 0 0 0 0 1 0 0 0
..................................................................................................AGTATTAAGAGGGCTAAAAA..................................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0 0
................................................GACACGCAGCTCTATAACCT....................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................CATAAGTATTAAGAGGGTTA......................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................GTATTAAGAGGGTTAAAAAGG................................................................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................GTTCATAAGTATTAAGAGGG............................................................................................................................................ 20 0 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................................................AGTATTAAGAGGGTTAAAAA..................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................GGGTTAAAAAGGGGTTAA............................................................................................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................GAGGGTTAAAAAGGGGTTAA............................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................TATAAGTATTAAGAGGGTTAAA....................................................................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................................................GTTCATAAGTATTAAGAGGGT........................................................................................................................................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0
.........................................................................................................AGAGGGTTAAAAAGGGGTTA.............................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTTACTTTGGGAGGACATA............. 19 2 5 0.20 1 0 1 0 0 0 0 0 0
...................TCTTACGGCGGCCGTTCCTGAAGT................................................................................................................................................................................................................ 24 2 5 0.20 1 1 0 0 0 0 0 0 0
.........................GGCGGCCGTTCCTGAAGT................................................................................................................................................................................................................ 18 0 5 0.20 1 0 0 0 0 0 1 0 0
.....................CTACGGCGGCCGTTCCTGAAGT................................................................................................................................................................................................................ 22 1 5 0.20 1 0 0 0 0 0 1 0 0
.........................................................CTCTATAACCTGACTTTTT............................................................................................................................................................................... 19 0 5 0.20 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................CACACGCACACACCTAACACC..................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTACTTTGGGAGGACATA............. 18 2 6 0.17 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TACTTTGGGAGGACATAAAA.......... 20 3 9 0.11 1 0 1 0 0 0 0 0 0
........................................................................................................AAGAGGGTTAAGATGGGCTT............................................................................................................................... 20 3 14 0.07 1 0 0 0 1 0 0 0 0
................................................................................................................AAAAAAGGGTTTCAGGCGTT....................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 1 0
.....................................................................................................................AGGGGTTGAAGCGTTAGT.................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................................................ATCTTCAAGTTGGACGTGG............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group2:562162-562412 - dps_1451 GAGGTCACGCCCCAAGAGCTTAATGCCGCCGGCAAGGACTTCAAGAGTCTGTGCGTCGAGATATTGGAC---TGA----AAAATTGTTAAAA-TTTTGCCAAGTAT-TCATAATTCTCCCAATTTTTCCCCAAT--------------TCCGCAA----------TCCCCAATAGAAATTCAACCTTTACCCCTTTT---------------------TTTTGCTCTCTCTGCATGTGTGTGTGCGTGTGTGCGTGTGTGGATTGTAGCGCCTCAATGAAACCCTGCTGTGTTTGTAGCGGCGGC
droPer2 scaffold_8:3327120-3327312 + GAGGTCACGCCCCAAGAGCTAAATGCCGCCGGCAAGGACTTCAAGCGTCTGTGCGTCGAGATATTGGAC---TGA----AAAATTGTTAAAT-TTTGGCCAAGTAT-TCATAATTCTCCCAATTTTTCCACAAT--------------TCCCCAA----------TCCCCAATCGAAATTCAACCTTTTCCCCTTTT------T-------------TTTTTGCTCTCTCTGCATGTTTTTATAC------------------------------------------------------------
droWil2 scf2_1100000004729:2032110-2032199 + ATTGTTACACCAGCTGAACTCAATGCAGCTGGCAAGGAGTTTCATCGCCTTTGCGAAGAGTCTTCGGTGGGCTAA----AAAGATT--------TTTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_10322:239105-239282 + GTGATCACGGCCGATGAGCTGCATGCGGCCGGGCAGGAGTTTAGGCGATTGTGTGGCGAGATTTTGGGCACATGA----AAAATTGTAAATT-TTTGGCTAACCTA-TTAAAATTTCACAAATTTTTCGAATTTCGAATCAAACCAACACCACCA----------CCCCCATACCAAATACCA-----------------------------------TATTCCCCTTT----------------------------------------------------------------------------
droMoj3 scaffold_6680:2288821-2288944 + GTGGTTACGCAGGACGAGCTGCATGCGGCCGGACACGAATTTAAGCGACTGTGTGGCGAGATTTTGGGCACATGA----AAAATTGTAAATTTTTTGGCTAACCTACATAAAATTTCACAAATTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:268699-268778 - GTGATCACGCCGGATGAGTTGCATGCTGCTAGTCAGGAGTTCAAGCGACTCTGTGGCGAGATTTTGGGCACGTGA----AAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:492644-492799 + GAGGTGACACAGGACGAGCTGCACGCGGCCGGGCAGGATTTCAAGCGGCTCTGCGGCGAGATTCTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCATGCAT-TCAAAATTC-CCCAATTTTTCAATTCT--------------CCACC--ACTG----------------CATTTTGTCCAGTGCCCCATTT---------------------TT-------------------------------------------------------------------------------------
droBip1 scf7180000395155:266919-267041 - GAGGTGACCCAGGACGAGTTGCATGCGGCTGGGAAGGACTTCAAGCGGCTCTGCGGCGAGATACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCATGCAT-TCAAAATTC-CCCAATTTTTCAATTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302441:1292855-1292984 - GTTGTGACGCCCGATGAGCTGCTGGCCGCTGGCAAGGATTTCAAGCGGCTGTGCGGCGAGATATTGGGC---TGAAAGAAAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTTTTCCAATTTTTCCCAAAC--------------CC-----------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454105:783030-783145 + GAGGTCACGCCCGCCGAGCTGCACGCGGCCGGCAGGAACTTCAAGCTGCTCTACGGGGAGCTCCTGGGC---TGA----AAAATTGTC-A-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491249:2960632-2960787 - GAAATTACACCCGATGAACTACATGCGGCTGGCAAGAACTTTAAGCTGTTGTACGGCGAACTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCGTGAAT--------------CCCCC--AAAGCAG---C-CGAAACCC----------------CCC-TT----------------AAAAATT-------------------------------------------------------------------------------------
droRho1 scf7180000780275:135664-135801 + GAGGTCACACCCGATGAACTCCATGCGGCTGGCAAGAACTTCAAGCTGTTGTACGGCGAACTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCGAAATC--------------CCCCA--A-AA-AG---CCTCA---------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302428:9221193-9221374 + GAGGTCACCCCCGATGAACTCCGAGCCGCTGGCAAGGACTTCAAGCTGTTGTACGGCGAGTTATTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCGTATAT--------------CCCCCC-A-AA-AG---CCCTA-----------------------CCTTCATTTCCGAA---CCCAAAAATTACGCTCTCTTCGCGTGGGT------------------------------------------------------------------
droTak1 scf7180000415857:204406-204594 + GAGGTCACACCCGATGAACTCCGTGCGGCTGGCAAGGAATTTAAGCTGTTGTACGGCGAGTTATTGGGC---TGA----AAAATTTGATA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCAAAAGA-----AAA------CCCAG--AACC---CAAACC-----------------------CCCTTTCATTTTTGAAACCCCCAGAAATTATGCTCTCTTCGTGTGGGT------------------------------------------------------------------
droEug1 scf7180000409466:185392-185574 + GAGGTTACCCCCGATGAGCTCTTAGCCGCTGGCAAGGACTTCAAGCTGTTGTACGGCGAATTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCATTAAC--------------CCCCC--AACG---CCGACC-----------------------TCTTTTCATTTTCGAA---CACAAAAATTTCGCTCTCTTCGTGTGGGT------------------------------------------------------------------
dm3 chr3L:2464232-2464407 + GAGGTCACGCCGGATGAACTCCGGGCCGCTGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTATTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCGAGCAT-TCAAAATTT-CCCAATTTTTCCAAATC--------------CCCGAAA----------TCCCAAACACAAACACAA----------------------------------ATATTGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------
droSim2 3l:2351794-2351969 + GAGGTCACGCCCGACGAACTCCGGGCCGCTGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCGAGCAT-TCAAAATTT-CCCAATTTTTCCAAATC--------------CCCGAAG----------TCCCAAACACAAACACAA----------------------------------ATATCGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------
droSec2 scaffold_2:2485926-2486101 + GAGGTCACGCCCGACGAGCTCCGGGCCGCCGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCGAGCAT-TCAAAATTT-CCCAATTTTTCCAAATC--------------CCCGAAG----------TCCCAAACACAAACACAA----------------------------------ATATCGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------
droYak3 3L:9477722-9477855 - GAGGTTACGCCCGATGAACTCCGGGCCGCAGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTATA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCAAATTT--------------CCCCAAA----------CCCC----------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:2471172-2471304 + GAGGTTACCCCCGATGAGCTCCGCTCCGCTGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCAAATTT--------------CCCAAAA----------CCC-----------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAGGTCACGCCCCAAGAGCTTAATGCCGCCGGCAAGGACTTCAAGAGTCTGTGCGTCGAGATATTGGAC---TGA----AAAATTGTTAAAA-TTTTGCCAAGTAT-TCATAATTCTCCCAATTTTTCCCCAAT--------------TCCGCAA----------TCCCCAATAGAAATTCAACCTTTACCCCTTTT---------------------TTTTGCTCTCTCTGCATGTGTGTGTGCGTGTGTGCGTGTGTGGATTGTAGCGCCTCAATGAAACCCTGCTGTGTTTGTAGCGGCGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................CGAGATATTGGAC---TGA----AAAA..............................................................................................................................................................................................................................20463.75255000000002550
.......................................................TCGAGATATTGGAC---TGA----AAAA..............................................................................................................................................................................................................................21425.50102100000001010
........................................................CGAGATATTGGAC---TGA----AAA...............................................................................................................................................................................................................................19418.757500000000750
........................................................CGAGATATTGGAC---TGA----AAAAT.............................................................................................................................................................................................................................2149.503800000010370
..........................................................AGATATTGGAC---TGA----AAAATTG...........................................................................................................................................................................................................................2159.204601000000450
.......................................................TCGAGATATTGGAC---TGA----AAA...............................................................................................................................................................................................................................2048.503410000000330
..........................................................AGATATTGGAC---TGA----AAAATT............................................................................................................................................................................................................................2057.203600000000360
................................................CTGTGCGTCGAGATATTGG..............................................................................................................................................................................................................................................1944.751900010040140
........................................................CGAGATATTGGAC---TGA----AAAATT............................................................................................................................................................................................................................2244.751910000000180
...........................................................................................................................................................................................................................................................GCGTGTGTGGATTGTAGCGC..................................2034.331300000010120
.............................................................TATTGGAC---TGA----AAAATTGTTA........................................................................................................................................................................................................................2154.202100000000210
................................................CTGTGCGTCGAGATATTGGA.............................................................................................................................................................................................................................................2043.751510000020120
..................................................GTGCGTCGAGATATTGGAC---TG.......................................................................................................................................................................................................................................2143.251300000000130
...............................................................TTGGAC---TGA----AAAATTGTTAAA......................................................................................................................................................................................................................2143.251300000000130
...........................................................GATATTGGAC---TGA----AAAATTG...........................................................................................................................................................................................................................2053.201602000000140
.....................................................CGTCGAGATATTGGAC---TGA----A.................................................................................................................................................................................................................................2042.751100000000110
...........................................................................................................................................................................................................................................................GCGTGTGTGGATTGTAGC....................................1832.3370000000070
...........................................................................................................................................................................................................................................................GCGTGTGTGGATTGTAGCG...................................1932.3370000000070
...................................................TGCGTCGAGATATTGGAC---TGA----..................................................................................................................................................................................................................................2142.2591000000080
........................................................CGAGATATTGGAC---TGA----AAAAA.............................................................................................................................................................................................................................2142.2590000000090
..........................................................AGATATTGGAC---TGA----AAAAT.............................................................................................................................................................................................................................1952.001000000000100
............................................................ATATTGGAC---TGA----AAAATTG...........................................................................................................................................................................................................................1952.00100100000090
...............................................................TTGGAC---TGA----AAAATTGTTAA.......................................................................................................................................................................................................................2042.0080000000080
.........................................................................................................................................................................................................................................................GTGCGTGTGTGGATTGTAGC....................................2031.6750000000050
........................................................CGAGATATTGGAC---TGA----AAAATA............................................................................................................................................................................................................................2241.5060000000060
..........................................................................................................................................................................................................................................................TGCGTGTGTGGATTGTAGC....................................1931.3340000000040
..............................................................ATTGGAC---TGA----AAAATTGTTAAA......................................................................................................................................................................................................................2241.2550000000050
.......................................................TCGAGATATTGGAC---TGA----AA................................................................................................................................................................................................................................1941.2550000000050
........................................................CGAGATATTGGAC---TGA----AA................................................................................................................................................................................................................................1841.0040000000040
...............................................................TTGGAC---TGA----AAAATTGTTAAAA-....................................................................................................................................................................................................................2211.0010000000010
.................................................TGTGCGTCGAGATATTGGAC---T........................................................................................................................................................................................................................................2141.0041000002010
.........................................................GAGATATTGGAC---TGA----AAAATT............................................................................................................................................................................................................................2151.0050000000050
.............................................................TATTGGAC---TGA----AAAATTGTT.........................................................................................................................................................................................................................2051.0050000001040
...........................................................GATATTGGAC---TGA----AAAATT............................................................................................................................................................................................................................1951.0050000000050
............................................................ATATTGGAC---TGA----AAAATTGTT.........................................................................................................................................................................................................................2150.8040000001030
.........................................................GAGATATTGGAC---TGA----AAAA..............................................................................................................................................................................................................................1950.8040000000040
.......................................................TCGAGATATTGGAC---TGA----AAAAA.............................................................................................................................................................................................................................2240.7530000000030
...................................................TGCGTCGAGATATTGGAC---TGA----A.................................................................................................................................................................................................................................2240.7531000000020
......................................................GTCGAGATATTGGAC---TGA----AA................................................................................................................................................................................................................................2040.7530000000030
................................................CTGTGCGTCGAGATATTGGAC---.........................................................................................................................................................................................................................................2140.7530200000010
.................................................TGTGCGTCGAGATATTGGA.............................................................................................................................................................................................................................................1940.7530000000030
.............................................................TATTGGAC---TGA----AAAATTGTTAA.......................................................................................................................................................................................................................2240.7530000000030
........................................................CGAGATATTGGAC---TGA----AAAATTT...........................................................................................................................................................................................................................2340.7530000000030
..........................................................................................................................................................................................................................................................TGCGTGTGTGGATTGTAGCGC..................................2130.6720000000020
..........................................................................................................................................................................................................................................................TGCGTGTGTGGATTGTAG.....................................1830.6720000000020
..........................................................................................................................................................................................................................................................TGCGTGTGTGGATTGTAGCG...................................2030.6720000000020
.......................................................................................................................................................................................................................................................GTGTGCGTGTGTGGATTGTAGC....................................2230.6720000000002
...........................................................GATATTGGAC---TGA----AAAATTGT..........................................................................................................................................................................................................................2150.6030000000030
..........................................................AGATATTGGAC---TGA----AAAATTGT..........................................................................................................................................................................................................................2250.6030000000030
.........................................................GAGATATTGGAC---TGA----AAAATTG...........................................................................................................................................................................................................................2250.6030000000030
.......................................................TCGAGATATTGGAC---TGA----A.................................................................................................................................................................................................................................1840.5020000000020
.....................................................................................................................................................................................................................................................................ATTGTAGCGCCTCAATGAAAC.......................2120.5010000000010
.........................CCGCCGGCAAGGACTTCAAG....................................................................................................................................................................................................................................................................2040.5020000000020
.....................................................CGTCGAGATATTGGAC---TGA----AA................................................................................................................................................................................................................................2140.5021000000010
......................................................GTCGAGATATTGGAC---TGA----AAA...............................................................................................................................................................................................................................2140.5020000000020
........................................................CGAGATATTGGAC---TGA----AAAATTTA..........................................................................................................................................................................................................................2440.5020000000020
..................................................GTGCGTCGAGATATTGGAC---.........................................................................................................................................................................................................................................1940.5020000000020
..................................................GTGCGTCGAGATATTGGA.............................................................................................................................................................................................................................................1840.5020000000020
................................................................TGGAC---TGA----AAAATTGTTAAA......................................................................................................................................................................................................................2040.5020000000020
............................................................ATATTGGAC---TGA----AAAATTGTTTT.......................................................................................................................................................................................................................2350.4020000000020
.........................................................GAGATATTGGAC---TGA----AAAAT.............................................................................................................................................................................................................................2050.4020000000020
...........................................................GATATTGGAC---TGA----AAAAT.............................................................................................................................................................................................................................1850.4020000000020
........................................................................................................................................................................................................................................................TGTGCGTGTGTGGATTGTAGCG...................................2230.3310000000010
............................................................................................................................................................................................................................................................CGTGTGTGGATTGTAGCGC..................................1930.3310000010000
..............................................................................................................................................................................................................................................................TGTGTGGATTGTAGCGCCTCA..............................2130.3310000001000
.........................................................................................................................................................................................................................................................GTGCGTGTGTGGATTGTAGCGC..................................2230.3310000000010
.............................................................................................................................................................................................................................................................GTGTGTGGATTGTAGCGCC.................................1930.3310000000010
.................................................................................................GCCAAGTAT-TCATAATTCTC...........................................................................................................................................................................................2030.3310100000000
........................................................................................................................................................................................................................................................TGTGCGTGTGTGGATTGTAGC....................................2130.3310000000010
GAGGTCACGCCCCAAGAGC..............................................................................................................................................................................................................................................................................................1930.3310000001000
.......................................................................................................................................................................................................................................................GTGTGCGTGTGTGGATTGTAG.....................................2130.3310100000000
....................................................GCGTCGAGATATTGGAC---TGA----AAAATTG...........................................................................................................................................................................................................................2740.2510000000010
...................................................TGCGTCGAGATATTGGAC---TG.......................................................................................................................................................................................................................................2040.2510000000010
.......................................................TCGAGATATTGGAC---TGA----AAAATTGTTAAA......................................................................................................................................................................................................................2940.2510000001000
..............................................................ATTGGAC---TGA----AAAATTGTTAA.......................................................................................................................................................................................................................2140.2510000000010
.......................................................................................................TAT-TCATAATTCTCCCAATT.....................................................................................................................................................................................2040.2510000000010
................................................CTGTGCGTCGAGATATTGGAC---TGA----AA................................................................................................................................................................................................................................2640.2510000000010
.............................................................................................................ATAATTCTCCCAATTTTTCC................................................................................................................................................................................2040.2510100000000
.........................................................................................................T-TCATAATTCTCCCAATTTT...................................................................................................................................................................................2040.2510000000010
........................................................CGAGATATTGGAC---TGA----AAAATC............................................................................................................................................................................................................................2240.2510000000010
........................................................CGAGATATTGGAC---TGA----AAAATTG...........................................................................................................................................................................................................................2340.2510000000010
.................................................TGTGCGTCGAGATATTGGAC---.........................................................................................................................................................................................................................................2040.2510000000010
........................................................CGAGATATTGGAC---TGA----AAAATAA...........................................................................................................................................................................................................................2340.2510000000010
.......................................................TCGAGATATTGGAC---TGA----AAAATT............................................................................................................................................................................................................................2340.2510000000010
....................................................GCGTCGAGATATTGGAC---TG.......................................................................................................................................................................................................................................1940.2510000000010
.....................................................CGTCGAGATATTGGAC---TGA----AAAA..............................................................................................................................................................................................................................2340.2510000000010
..............................................................................................................TAATTCTCCCAATTTTTCCCT..............................................................................................................................................................................2140.2510000000010
........................................................CGAGATATTGGAC---TGA----AAAAAAA...........................................................................................................................................................................................................................2340.2510000000010
...........................................................GATATTGGAC---TGA----AAAATTGTTTTT......................................................................................................................................................................................................................2550.2010000000010
..........................................................AGATATTGGAC---TGA----AAAATTGTT.........................................................................................................................................................................................................................2350.2010000000010
...........................................................GATATTGGAC---TGA----AAAAA.............................................................................................................................................................................................................................1850.2010000000010
......................ATGCCGCCGGCAAGGACTT........................................................................................................................................................................................................................................................................1950.2010100000000
.............................................................TATTGGAC---TGA----AAAAT.............................................................................................................................................................................................................................1650.2010000000010
.....................AATGCCGCCGGCAAGGACTTCT......................................................................................................................................................................................................................................................................2250.2010000000010
.........................................................GAGATATTGGAC---TGA----AAAAA.............................................................................................................................................................................................................................2050.2010000000010
..........................................................AGATATTGGAC---TGA----AAAATTGA..........................................................................................................................................................................................................................2250.2010000000010
...............................................................TTGGAC---TGA----AAAATTGTT.........................................................................................................................................................................................................................1850.2010000000010
.........................................................GAGATATTGGAC---TGA----AAAATTT...........................................................................................................................................................................................................................2250.2010000000010
...............................................................TTGGAC---TGA----AAAATTGTTA........................................................................................................................................................................................................................1950.2010000000010
............................................................ATATTGGAC---TGA----AAAATTGT..........................................................................................................................................................................................................................2050.2010000000010
...........................................................GATATTGGAC---TGA----AAAATTGTT.........................................................................................................................................................................................................................2250.2010000000010
............................................................ATATTGGAC---TGA----AAAATTGC..........................................................................................................................................................................................................................2050.2010001000000
..........................................................AGATATTGGAC---TGA----AAAATA............................................................................................................................................................................................................................2060.1710000000010
droPer2
GAGGTCACGCCCCAAGAGCTAAATGCCGCCGGCAAGGACTTCAAGCGTCTGTGCGTCGAGATATTGGAC---TGA----AAAATTGTTAAAT-TTTGGCCAAGTAT-TCATAATTCTCCCAATTTTTCCACAAT--------------TCCCCAA----------TCCCCAATCGAAATTCAACCTTTTCCCCTTTT------T-------------TTTTTGCTCTCTCTGCATGTTTTTATAC------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................CGAGATATTGGAC---TGA----AAAA..............................................................................................................................................................................................................................2020.501100000
droWil2
ATTGTTACACCAGCTGAACTCAATGCAGCTGGCAAGGAGTTTCATCGCCTTTGCGAAGAGTCTTCGGTGGGCTAA----AAAGATT--------TTTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................ATCGCCTTTGCGAAGAGTCTTCGGTG............................................................................................................................................................................................................................................2611.00100010
................................................CTTTGCGAAGAGTCTTCGGTGGGC.........................................................................................................................................................................................................................................2411.00100100
....................................................GCGAAGAGTCTTCGGTGGGC.........................................................................................................................................................................................................................................2011.00100010
......................................................GAAGAGTCTTCGGTGGGC.........................................................................................................................................................................................................................................1811.00100100
..................................................TTGCGAAGAGTCTTCGGTGGGCT........................................................................................................................................................................................................................................2311.00100100
...........................................................GTCTTCGGTGGGCTAA----AAA...............................................................................................................................................................................................................................1911.00100100
......................................GTTTCATCGCCTTTGCGAAGAGT....................................................................................................................................................................................................................................................2311.00101000
................................................CTTTGCGAAGAGTCTTCGGTGGG..........................................................................................................................................................................................................................................2311.00101000
.............................................CGCCTTTGCGAAGAGTCTTCGGT.............................................................................................................................................................................................................................................2311.00100100
.............................................CGCCTTTGCGAAGAGTCTTCGGTG............................................................................................................................................................................................................................................2411.00110000
..............................GGCAAGGAGTTTCATCGCCTTT.............................................................................................................................................................................................................................................................2211.00101000
.....................AATGCAGCTGGCAAGGAGT.........................................................................................................................................................................................................................................................................1911.00100001
...........................................ATCGCCTTTGCGAAGAGTCTTCGGT.............................................................................................................................................................................................................................................2511.00100100
......................................................GAAGAGTCTTCGGTGGGCT........................................................................................................................................................................................................................................1911.00100100
...................................GGAGTTTCATCGCCTTTGC...........................................................................................................................................................................................................................................................1911.00100010
......................................................GAAGAGTCTTCGGTGGGCTAA----A.................................................................................................................................................................................................................................2211.00100100
.................ACTCAATGCAGCTGGCAAGGA...........................................................................................................................................................................................................................................................................2111.00100010
droVir3
GTGATCACGGCCGATGAGCTGCATGCGGCCGGGCAGGAGTTTAGGCGATTGTGTGGCGAGATTTTGGGCACATGA----AAAATTGTAAATT-TTTGGCTAACCTA-TTAAAATTTCACAAATTTTTCGAATTTCGAATCAAACCAACACCACCA----------CCCCCATACCAAATACCA-----------------------------------TATTCCCCTTT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................TTTTTCGAATTTCGAATC.....................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000002
........................................TTAGGCGATTGTGTGGCGAGA....................................................................................................................................................................................................................................................2112.002000002000000000000000000000000000000000000000000000000000000000
......................................................................CATGA----AAAATTGTAAATT-TTT.................................................................................................................................................................................................................2112.002000000000000000000000000000002000000000000000000000000000000000
...........CGATGAGCTGCATGCGGCC...................................................................................................................................................................................................................................................................................1912.002001000001000000000000000000000000000000000000000000000000000000
..................................AGGAGTTTAGGCGATTGTGTGG.........................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
......................................................GGCGAGATTTTGGGCACA.........................................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
..GATCACGGCCGATGAGCTGCAT.........................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
.............................................................TTTTGGGCACATGA----AAAATTGTAAA.......................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................TTTGGCTAACCTA-TTAAAATTTCAC..........................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................AACCTA-TTAAAATTTCACAA........................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................GATTGTGTGGCGAGATTTTGGGC............................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................TTTCACAAATTTTTCGAATTTCGAATC.....................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTTCGAATTTCGAATCAAACCAACACCAC........................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
............................................................ATTTTGGGCACATGA----AAAATT............................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CAAACCAACACCACCA----------CCCCCA......................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................T-TTTGGCTAACCTA-TTAAA.................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................ATTTTTCGAATTTCGAATC.....................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...........CGATGAGCTGCATGCGGCCGGGCAG.............................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............GATGAGCTGCATGCGGCCGGGCAGGA...........................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
...........................................................GATTTTGGGCACATGA----AAAATTGTAA........................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
......................................................GGCGAGATTTTGGGCACATGA----AAAATT............................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........CGATGAGCTGCATGCGGCCG..................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................GGAGTTTAGGCGATTGTGT...........................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
..............TGAGCTGCATGCGGCCGGGCAG.............................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................TTTTGGGCACATGA----AAAATTGTAA........................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
..GATCACGGCCGATGAGCTGC...........................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................CTAACCTA-TTAAAATTTCACAAATTT....................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................TTTTGGGCACATGA----AAAATTGTAAAT......................................................................................................................................................................................................................2611.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
GTGGTTACGCAGGACGAGCTGCATGCGGCCGGACACGAATTTAAGCGACTGTGTGGCGAGATTTTGGGCACATGA----AAAATTGTAAATTTTTTGGCTAACCTACATAAAATTTCACAAATTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............CGAGCTGCATGCGGCCGGA................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................GTAAATTTTTTGGCTAACCTA.......................................................................................................................................................................................................2111.001100000
........GCAGGACGAGCTGCATGCGGCCGGA................................................................................................................................................................................................................................................................................2511.001100000
..GGTTACGCAGGACGAGCTGCATGCG......................................................................................................................................................................................................................................................................................2511.001000100
droGri2
GTGATCACGCCGGATGAGTTGCATGCTGCTAGTCAGGAGTTCAAGCGACTCTGTGGCGAGATTTTGGGCACGTGA----AAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GAGGTGACACAGGACGAGCTGCACGCGGCCGGGCAGGATTTCAAGCGGCTCTGCGGCGAGATTCTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCATGCAT-TCAAAATTC-CCCAATTTTTCAATTCT--------------CCACC--ACTG----------------CATTTTGTCCAGTGCCCCATTT---------------------TT-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................GCTCTGCGGCGAGATTCTGGGC---TGA----AA................................................................................................................................................................................................................................2711.001000001
..................................................CTGCGGCGAGATTCTGGGC---TGA----AAAAT.............................................................................................................................................................................................................................2711.001010000
................................................................................................................ATTC-CCCAATTTTTCAATTCT--------------CCACC--......................................................................................................................................................2611.001010000
......................................TTTCAAGCGGCTCTGCGGCGAGA....................................................................................................................................................................................................................................................2311.001000010
..............................GGGCAGGATTTCAAGCGGCT...............................................................................................................................................................................................................................................................2011.001000001
.........................................................................GA----AAAATTGTCTA-T-TTTGGCCATGCAT-TC....................................................................................................................................................................................................2911.001100000
...................................GGATTTCAAGCGGCTCTGC...........................................................................................................................................................................................................................................................1911.001010000
......................................................GGCGAGATTCTGGGC---TGA----AAAATT............................................................................................................................................................................................................................2411.001010000
..............................................................................................TTGGCCATGCAT-TCAAAATTC-CCCAATT.....................................................................................................................................................................................2811.001100000
..................................................CTGCGGCGAGATTCTGGGC---TGA----AA................................................................................................................................................................................................................................2411.001100000
...................................................TGCGGCGAGATTCTGGGC---TGA----..................................................................................................................................................................................................................................2111.001100000
....................GCACGCGGCCGGGCAGGA...........................................................................................................................................................................................................................................................................1811.001000001
droBip1
GAGGTGACCCAGGACGAGTTGCATGCGGCTGGGAAGGACTTCAAGCGGCTCTGCGGCGAGATACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCATGCAT-TCAAAATTC-CCCAATTTTTCAATTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTTGTGACGCCCGATGAGCTGCTGGCCGCTGGCAAGGATTTCAAGCGGCTGTGCGGCGAGATATTGGGC---TGAAAGAAAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTTTTCCAATTTTTCCCAAAC--------------CC-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GAGGTCACGCCCGCCGAGCTGCACGCGGCCGGCAGGAACTTCAAGCTGCTCTACGGGGAGCTCCTGGGC---TGA----AAAATTGTC-A-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GAAATTACACCCGATGAACTACATGCGGCTGGCAAGAACTTTAAGCTGTTGTACGGCGAACTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCGTGAAT--------------CCCCC--AAAGCAG---C-CGAAACCC----------------CCC-TT----------------AAAAATT-------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAGGTCACACCCGATGAACTCCATGCGGCTGGCAAGAACTTCAAGCTGTTGTACGGCGAACTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCGAAATC--------------CCCCA--A-AA-AG---CCTCA---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GAGGTCACCCCCGATGAACTCCGAGCCGCTGGCAAGGACTTCAAGCTGTTGTACGGCGAGTTATTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCGTATAT--------------CCCCCC-A-AA-AG---CCCTA-----------------------CCTTCATTTCCGAA---CCCAAAAATTACGCTCTCTTCGCGTGGGT------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAGGTCACACCCGATGAACTCCGTGCGGCTGGCAAGGAATTTAAGCTGTTGTACGGCGAGTTATTGGGC---TGA----AAAATTTGATA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCAAAAGA-----AAA------CCCAG--AACC---CAAACC-----------------------CCCTTTCATTTTTGAAACCCCCAGAAATTATGCTCTCTTCGTGTGGGT------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GAGGTTACCCCCGATGAGCTCTTAGCCGCTGGCAAGGACTTCAAGCTGTTGTACGGCGAATTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCATTAAC--------------CCCCC--AACG---CCGACC-----------------------TCTTTTCATTTTCGAA---CACAAAAATTTCGCTCTCTTCGTGTGGGT------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GAGGTCACGCCGGATGAACTCCGGGCCGCTGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTATTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCGAGCAT-TCAAAATTT-CCCAATTTTTCCAAATC--------------CCCGAAA----------TCCCAAACACAAACACAA----------------------------------ATATTGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................TTCCAAATC--------------CCCGAAA----------TCCCAAACACA.................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGCAGGAACTTCAAGCTGTTGTAC...........................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGTTGTACGGCGAGTTATTGG..............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
......................................................GGCGAGTTATTGGGC---TGA----A.................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................A-T-TTTGGCCGAGCAT-TCAA..................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCTA-T-TTTGGCCGAGCAT-TCA...................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..................................................GTACGGCGAGTTATTGGGC---TGA----AA................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTGTACGGCGAGTTATTGGG.............................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CTCTTCGTGTGGGTCCGC..............................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGCAGGAACTTCAAGCTGTTGTACGG.........................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TGA----AAAATTGTCTA-T-TTTGGCCGAGC.........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................T-TTTGGCCGAGCAT-TCAAAAT...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGCCGGATGAACTCCGGGCCGCTGGCAG..............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GGCAGGAACTTCAAGCTGTT...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................TTGTACGGCGAGTTATTGGGC---TG.......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................TTCAAGCTGTTGTACGGCGAGTT...................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GATGAACTCCGGGCCGCTG..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGTTGTACGGCGAGTTATTGGGC---TGA----..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............GATGAACTCCGGGCCGCT...................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TATTGCTCTCTTCGTGTGGGTC.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................CGGGCCGCTGGCAGGAACTT........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CACAA----------------------------------ATATTGCTCTCTTCGTGTGGG...................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................TTTCCAAATC--------------CCCGAAA----------TC..........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCTGTTGTACGGCGAGTTATTGGGC---.........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................TCCGGGCCGCTGGCAGGAACTTCAAG....................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTACGGCGAGTTATTGGGC---TGA----..................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTGTCTA-T-TTTGGCCGAGCAT-TCAAAA................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GCTCTCTTCGTGTGGGTCCGC..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TATTGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................TGGCCGAGCAT-TCAAAAT...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTTGGCCGAGCAT-TCAAAATTT-CCCAA.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTGCTCTCTTCGTGTGGGTCCGC..............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................TGTACGGCGAGTTATTGGGC---T........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACTCCGGGCCGCTGGCAGGAACT.........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TCCCAAACACAAACACAA----------------------------------ATATTGCTCT..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTA-T-TTTGGCCGAGCAT-TCAAAATTT-CC..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTATTGGGC---TGA----AAAATTGTC.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTGCTCTCTTCGTGTGGG...................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACGGCGAGTTATTGGGC---TGA----..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGCAGGAACTTCAAGCTGTTGTACGGCGA......................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TGCTCTCTTCGTGTGGGT..................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................CGGGCCGCTGGCAGGAACA.........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTACGGCGAGTTATTGGGC---T........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTGCTCTCTTCGTGTGGGTCCT...............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GGCCGAGCAT-TCAAAATTT-CCCAATT.....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................TCCGGGCCGCTGGCAGGAACTTCAAGC...................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGTCACGCCGGATGAACTCCGGG........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTTGTACGGCGAGTTATTG...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................ACTCCGGGCCGCTGGCAGGAAC..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATGAACTCCGGGCCGCTGGC................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GAACTTCAAGCTGTTGTACGGC........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................CAAACACAAACACAA----------------------------------ATATTGCTC...............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AAACACAA----------------------------------ATATTGCTCT..............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGTTGTACGGCGAGTTATTGGGC---.........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................GGCCGAGCAT-TCAAAATTT-CCCAAT......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAGGAACTTCAAGCTGTTGTACGGCG.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAGGTCACGCCGGATGAACTC............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGTCTA-T-TTTGGCCGAGCAT-TCAAAA................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACGGCGAGTTATTGGGC---TG.......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................AAGCTGTTGTACGGCGAGTT...................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................AAAATTGTCTA-T-TTTGGCCGAGCAT-T.....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGGATGAACTCCGGGCCGCTGGCAGGAAC..........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAGGAACTTCAAGCTGTTGTACGGCGA......................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AA----------------------------------ATATTGCTCTCTTCGTGTGGG...................................................................2311.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTGCTCTCTTCGTGTGG....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................GGCCGCTGGCAGGAACTTCA......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGCTGTTGTACGGCGAGTTATTG...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTGCTCTCTTCGTGTGGGT..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
GAGGTCACGCCCGACGAACTCCGGGCCGCTGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCGAGCAT-TCAAAATTT-CCCAATTTTTCCAAATC--------------CCCGAAG----------TCCCAAACACAAACACAA----------------------------------ATATCGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............ACGAACTCCGGGCCGCTGGCA...............................................................................................................................................................................................................................................................................2111.00110000000000000000
..............................GGCAGGAACTTCAAGCTG.................................................................................................................................................................................................................................................................1811.00100100000000000000
...................................................TACGGCGAGTTACTGGGC---TG.......................................................................................................................................................................................................................................2011.00100000000000001000
...GTCACGCCCGACGAACTCCGGGCCGCT...................................................................................................................................................................................................................................................................................2711.00100010000000000000
.........................................................GAGTTACTGGGC---TGA----AAA...............................................................................................................................................................................................................................1811.00101000000000000000
..............................................................ACTGGGC---TGA----AAAATT............................................................................................................................................................................................................................1611.00100000010000000000
.........CCCGACGAACTCCGGGCCGCC...................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........CGACGAACTCCGGGCCGCTGGC................................................................................................................................................................................................................................................................................2211.00100100000000000000
..............................................TGTTGTACGGCGAGTTACT................................................................................................................................................................................................................................................1911.00101000000000000000
droSec2
GAGGTCACGCCCGACGAGCTCCGGGCCGCCGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCGAGCAT-TCAAAATTT-CCCAATTTTTCCAAATC--------------CCCGAAG----------TCCCAAACACAAACACAA----------------------------------ATATCGCTCTCTTCGTGTGGGTCCGCGC------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................CTCTTCGTGTGGGTCCGC..............................................................1811.0010010
.........................................................................................................................................................................................................................ATATCGCTCTCTTCGTGTGG....................................................................2011.0010100
....................................AACTTCAAGCTGTTGTACGG.........................................................................................................................................................................................................................................................2011.0010010
droYak3
GAGGTTACGCCCGATGAACTCCGGGCCGCAGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTATA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCAAATTT--------------CCCCAAA----------CCCC----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............GATGAACTCCGGGCCGCAGGCAGG.............................................................................................................................................................................................................................................................................2411.00110000000000
.........................................................GAGTTACTGGGC---TGA----AAA...............................................................................................................................................................................................................................1811.00101000000000
....................................AACTTCAAGCTGTTGTACGGCGAG.....................................................................................................................................................................................................................................................2411.00100000010000
...........................................................GTTACTGGGC---TGA----AAAATT............................................................................................................................................................................................................................1911.00100000010000
....................CCGGGCCGCAGGCAGGAACTTCAAGCT..................................................................................................................................................................................................................................................................2711.00100100000000
..............................................................ACTGGGC---TGA----AAAATTGTAT........................................................................................................................................................................................................................2011.00101000000000
..........................................AAGCTGTTGTACGGCGAGTTACTGGGC---.........................................................................................................................................................................................................................................2711.00100000010000
.................................................................................................GCCAAGCAT-TCAAAATTT-CCCA........................................................................................................................................................................................2211.00101000000000
........................................................CGAGTTACTGGGC---TGA----AAAATTGT..........................................................................................................................................................................................................................2411.00101000000000
droEre2
GAGGTTACCCCCGATGAGCTCCGCTCCGCTGGCAGGAACTTCAAGCTGTTGTACGGCGAGTTACTGGGC---TGA----AAAATTGTCTA-T-TTTGGCCAAGCAT-TCAAAATTT-CCCAATTTTTCAAATTT--------------CCCAAAA----------CCC-----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................GTTACTGGGC---TGA----AAAATTGT..........................................................................................................................................................................................................................2111.0010000010
.......................CTCCGCTGGCAGGAACTT........................................................................................................................................................................................................................................................................1811.0011000000
...............................................GTTGTACGGCGAGTTACTGGGC---.........................................................................................................................................................................................................................................2211.0011000000
.....TACCCCCGATGAGCTCCGCT........................................................................................................................................................................................................................................................................................2011.0010100000
...........................GCTGGCAGGAACTTCAAGCT..................................................................................................................................................................................................................................................................2011.0010000100
..................CTCCGCTCCGCTGGCAGGAACTTCAAGC...................................................................................................................................................................................................................................................................2811.0011000000
..............................GGCAGGAACTTCAAGCTGTT...............................................................................................................................................................................................................................................................2011.0011000000
...............................GCAGGAACTTCAAGCTGTTGTACGGCG.......................................................................................................................................................................................................................................................2711.0010000100
..................................................GTACGGCGAGTTACTGGGC---.........................................................................................................................................................................................................................................1911.0011000000
...............................................................................................................AATTT-CCCAATTTTTCAAATTT--------------CC...........................................................................................................................................................2411.0010100000
.................GCTCCGCTCCGCTGGCAGGAACT.........................................................................................................................................................................................................................................................................2311.0010001000
......................................................GGCGAGTTACTGGGC---TGA----AA................................................................................................................................................................................................................................2011.0010000100
....................................AACTTCAAGCTGTTGTACGG.........................................................................................................................................................................................................................................................2011.0010001000

Generated: 05/18/2015 at 12:48 AM