ID:

dps_1414

 Coordinate:

4_group1:4366355-4366420 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dpse\GA17619-cds]; CDS [Dpse\GA17619-cds]; exon [dpse_GLEANR_17059:3]; exon [dpse_GLEANR_17059:2]; intron [Dpse\GA17619-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
mature
  1. dps_1414  4_group1:4366365-4366390 +
  2. 4_group4:3425940-3425965 -
star
  1. XL_group1e:3189246-3189264 +
  2. XL_group1e:7452531-7452549 +
  3. XL_group1e:11064998-11065016 +
  4. 2:1773608-1773626 +
  5. 2:4392033-4392051 +
  6. 2:8388528-8388546 +
  7. 2:11936819-11936837 +
  8. 2:12557642-12557660 +
  9. 2:14611569-14611587 +
  10. 2:19113953-19113971 +
  11. 2:28820206-28820224 +
  12. dps_1414  4_group1:4366373-4366391 +
  13. dps_1414  4_group1:4366397-4366415 +
  14. 4_group3:5336094-5336112 +
  15. XR_group6:3026317-3026335 +
  16. XR_group6:4859414-4859432 +
  17. XR_group6:12619247-12619265 +
  18. XL_group1a:7394423-7394441 +
  19. Unknown_group_807:3321-3339 +
  20. Unknown_group_504:2236-2254 +

Sense Strand Reads

##################################################------------------------------------------------------------------##################################################
CACAGCCGCAACCGCCAGTGGCAACAACACAACAACAGCAGCAACAACAAGTGCAGCAGCAGCACCAACAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAATCGCTCAATGACCAACTGCAGCATTCCATCAACGATAT
************************************************************..........((.((.((.((.............)).)).)).))......******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M059
embryo
 M040
female body
 GSM343916
embryo
 V112
male body		 M062
head
.ACAGCCGCAACCGCCAGT................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................AATGACCAACTGCAGCATTCCATCAAC..... 27 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................AGTGACCAACTGCAGCATTCCATCAAC..... 27 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................GCATTCCATCAACGATAT 18 0 1 1.00 1 0 0 1 0 0
...................GGCAACAACACAACAACAGCAG............................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................ACCAACTGCAGCATTCCATCAACGATA. 27 0 1 1.00 1 1 0 0 0 0
..........................................AACAACAAGTGCAGCAGCA......................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...........................................ACAACAAGTGCAGCAGCAGCACCAAC................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................ACAGCAGCAGCAACAGCAATCGCTCAATG............................ 29 0 1 1.00 1 1 0 0 0 0
..............................AACAAATGCAGCAACAACAAATGCAGCA............................................................................................................ 28 3 2 0.50 1 0 1 0 0 0
............................................................AGCACCAACAGCAGCAGCAGCAACAA................................................................................ 26 0 2 0.50 1 0 0 1 0 0
....................TCTACGACACAACAACAGCAGCA........................................................................................................................... 23 3 6 0.17 1 0 1 0 0 0
..................................................................................ACAACAACAACAGCAGCAGC................................................................ 20 0 20 0.15 3 0 3 0 0 0
..............................................................CACCAACAGCAGCAGCAGCAAC.................................................................................. 22 0 7 0.14 1 0 0 0 1 0
.....................................................................................ACAACAACAGCAGCAGCAGCAACAACA...................................................... 27 0 9 0.11 1 0 1 0 0 0
.........................................................................................................AACAACAGCAGCAGCAACAGC........................................ 21 0 20 0.10 2 0 2 0 0 0
............................................................................................CAGCAGCAGCAGCAACAAC....................................................... 19 0 20 0.10 2 0 0 2 0 0
....................................................................CAGCAGCAGCAGCAACAAC............................................................................... 19 0 20 0.10 2 0 0 2 0 0
.....................................................................................ACAACAACAGCAGCAGAAGCAACAACA...................................................... 27 1 10 0.10 1 0 1 0 0 0
..........................................................GCAGCACCAACAGCAGCAGCAG...................................................................................... 22 0 10 0.10 1 0 0 1 0 0
...................................................................................CAACAACAACAGCAGCAGCAGC............................................................. 22 0 20 0.10 2 0 0 2 0 0
...........................................................................................ACAGCAGCAGCAGCAACA......................................................... 18 0 20 0.10 2 0 0 2 0 0
.....................................................................................ACAACAACAGCAGCAGCAGCAACAAC....................................................... 26 0 10 0.10 1 0 1 0 0 0
......................................................................GCAGCAGCAGCAACAACAACAAC......................................................................... 23 0 20 0.10 2 0 2 0 0 0
............................................................................GCAGCAACAACAACAACAGC...................................................................... 20 0 20 0.10 2 0 2 0 0 0
.....................CAACAACACAACAACAACAGCAGCA........................................................................................................................ 25 2 13 0.08 1 0 1 0 0 0
..........................................................................................AACAGCAGCAGCAGCAACAACAGCAGCA................................................ 28 0 14 0.07 1 0 1 0 0 0
....................................................GCAGCAGCAGCACCAACAGCA............................................................................................. 21 0 14 0.07 1 0 1 0 0 0
...................................................................ACAGCAGCAGCAGCAACAACAACAAC......................................................................... 26 0 14 0.07 1 1 0 0 0 0
.........................................................AGCAGCACCAACAGCAGC........................................................................................... 18 0 16 0.06 1 0 1 0 0 0
............................................................................................CAGCAGCAGCAGCAACAACAGCAG.................................................. 24 0 20 0.05 1 0 1 0 0 0
................................................................CCAACAGCAGCAGCAGCAAC.................................................................................. 20 0 20 0.05 1 1 0 0 0 0
................................................................CCAACAGCAGCAGCAGCAA................................................................................... 19 0 20 0.05 1 0 0 1 0 0
......................................................................................................AGCAACAACAGCAGCAGCAA............................................ 20 0 20 0.05 1 0 0 1 0 0
..............................................................................AGCAACAACAACAACAGCAGCAGC................................................................ 24 0 20 0.05 1 1 0 0 0 0
....................................................................................AACAACAACAGCAGCAGCAG.............................................................. 20 0 20 0.05 1 0 0 1 0 0
...................................................................................CAACAACAACAGCAGCAGCAGCAAC.......................................................... 25 0 20 0.05 1 0 0 1 0 0
.................................................................................................GCAGCAGCAACAACAGCAGCA................................................ 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................CAGCAGCAGCAACAACAGCAGCAG............................................... 24 0 20 0.05 1 0 1 0 0 0
....................................................................................AACAACAACAGCAGCAGCAGC............................................................. 21 0 20 0.05 1 1 0 0 0 0
................................................................................................AGCAGCAGCAACAACAGCA................................................... 19 0 20 0.05 1 0 0 1 0 0
..............................................................................................GCAGCAGCAGCAACAACAGCAGC................................................. 23 0 20 0.05 1 0 1 0 0 0
............................ACAACAACAGCAGCAACAACA..................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
.......................................................................CAGCAGCAGCAACAACAACA........................................................................... 20 0 20 0.05 1 0 0 0 1 0
................................................................CCAACAGCAGCAGCAGCATCAA................................................................................ 22 1 20 0.05 1 0 0 0 1 0
.............................................................................................AGCAGCAGCAGCAACAACAGCAG.................................................. 23 0 20 0.05 1 0 1 0 0 0
................................................................................CAACAACAACAACAGCAGCAGCAG.............................................................. 24 0 20 0.05 1 0 1 0 0 0
....................................................................CAGCAGCAGCAGCAACAACAACAA.......................................................................... 24 0 20 0.05 1 0 1 0 0 0
.............................................................................CAGCAACAACAACAACAGCA..................................................................... 20 0 20 0.05 1 0 1 0 0 0
................................................................................CAACAACAACAACAGCAGCA.................................................................. 20 0 20 0.05 1 0 1 0 0 0
...............................................................................................CAGCAGCAGCAACAACAGCAGC................................................. 22 0 20 0.05 1 0 1 0 0 0
...................................................................................CAACAACAACAGCAGCAGC................................................................ 19 0 20 0.05 1 0 0 1 0 0
............................................................................................CAGCAGCAGCAGCAACAACAGCAGCAGCA............................................. 29 0 20 0.05 1 0 0 0 0 1
.......................................................................................AACAACAGCAGCAGCAGCAAC.......................................................... 21 0 20 0.05 1 1 0 0 0 0
..............................................................................AGCAACAACAACAACAGCAGCA.................................................................. 22 0 20 0.05 1 1 0 0 0 0
.............................................................................................AGCAGCAGCAGCAACAACAGCAGCA................................................ 25 0 20 0.05 1 0 1 0 0 0
..........................................................................CAGCAGCAACAACAACAACAGCAGCA.................................................................. 26 0 20 0.05 1 1 0 0 0 0
.................................................................................AACAACAACAACAGCAGCAG................................................................. 20 0 20 0.05 1 0 1 0 0 0
...............................................................................GCAACAACAACAACAGCAGCAGCAGT............................................................. 26 1 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

GTGTCGGCGTTGGCGGTCACCGTTGTTGTGTTGTTGTCGTCGTTGTTGTTCACGTCGTCGTCGTGGTTGTCGTCGTCGTCGTTGTTGTTGTTGTCGTCGTCGTCGTTGTTGTCGTCGTCGTTGTCGTTAGCGAGTTACTGGTTGACGTCGTAAGGTAGTTGCTATA
*******************************************************..........((.((.((.((.............)).)).)).))......************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
.................................................................................................................................................CGTCGTAAAGTAATTGCTATG 21 3 6 0.17 1 1
..GTCGGCGTTTGCGGTCTC.................................................................................................................................................. 18 2 11 0.09 1 1
......................TTGTTGTGTTGTTGTTGTCGT........................................................................................................................... 21 1 12 0.08 1 1
..............................................................................TCGTTGTTGTTGTTGTCGTC.................................................................... 20 0 20 0.05 1 1
.....................................................GTCGTCGTCGTGGTTGTCG.............................................................................................. 19 0 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group1:4366305-4366470 + dps_1414 CA-CAGCCGC-------------AACCGC--CAGTG---G---CAA---CAACA-CAACAA---CAGCAGCAA------CA---ACAAGTGCAGCAGCAGCACCAAC----------AGCAGCAG---CAGCAACAAC---A------A------CAACAGCAGCAGC------AG---CAACAA---C-----------AGCA---GCAGCAACAG-----------------CAATCGCTCAATGACCAAC-------------------TG-CAGCA------T----TCCATCAACGATAT
droPer2 scaffold_5:843930-844098 - CC-CAGCCGC-------------AACCGC--CAGTG---G---CAA---CAACA-CAACAA---CAGCAGCAA------CA---ACAAGTGCAGCAGCAGCACCAAC----------AGCAGCAG---CAGCA---AC---A------A------CAACAGCAGCAGC------AA---CAACAA---C---------AG--CA---ACAACAGCAG-----CAACAG------CAATCGCTCAATGACCAAC-------------------TG-CAGCA------T----TCCATCAACGATAT
droWil2 scf2_1100000004888:1009848-1010006 - CAGCAGC----------------AACAACAGCAGCA---G---CAG---CAACAGCAACAACA---GCAGCAG------CA---ACAACAACAGCAGCAACAACAAC----------AGCAGCAGCAGCAACA---GC---A------A------CAACAGCAGCAGC------AA---CAACAA---C--------------AGCAGCAACAACAA-----CAGCAGCAG------------CAACAACAG----------C-------------AAC---------------AGCAACAACAA
droVir3 scaffold_12823:8500-8662 + CTA--TTCAAATATACCAGCAGCAACAACAGCAGCA---G---CAA---CAGCAACAACA------GCAGCAG------CA---ACAGCAACAACAGCAGCAGCAAC----------AGCAAC------------------A------A------CAGCAGCAGCAAC------AG---CAACAA---C-----------AGCA---GCAGCAACAG-----------------CAACAACACCAGCAGCAACAG-------------------C-AGCA------GC------AACAGCAACA-
droMoj3 scaffold_6500:16033352-16033517 - CAGCAGC----------------AGCAACAGCAGCA---G---CAG---CAACAGCGGCAGCA---GCAGCAA------CA---GCAACAGCAGCAGCAGCAGCAAC----------AGCAGCAACAGCAGCA---GC---A------G------CAACAGCAGCAGC------AG---CAGCAA---C---------AG--CA---GCAGCAGCAG-----CAACAGCAG------------CAGCAGCAG----------C-------------AACAGCA---GCA---GCAACAGCA--GT
droGri2 scaffold_15081:1727883-1728048 + CAGCACC----------------AGCAACAACAACACTTA---CAG---CAACAACAACAA---CAGCAGCAA------CA---ACAACAGCAGCAACAGCAACAAC----------AGCAGCAG---CAGCA---ACAACA------A------CAGCAGCAGCAGC------CA---CAACAA---C-----------ACCA---GATGCAAATGCAATT--GC---AG------------CAACAACAG----------C---------TA-CAGCA------GC------AGCAA--ATAC
droAna3 scaffold_12929:312322-312493 + CAGCAGC----------------AGCAGCAGCAGTT---G---CAG---CAGCAACACTT------GCAACAG------CA---ACAGATGCAGCAGCAGCAGCAAC----------TGCAGCAA---CAGCA---AC---A------G------CAACT---------------G---CAACAG---CAGCAGCAGCAA--CTGCAGCA--------------ACAGCAACAACCTTCTCCCAT---GCTGG--GCCGACC----------TG-CTGCA------GT--TGCCACCGAC-ATGC
droBip1 scf7180000396360:488619-488774 - CAGCAGC----------------ATCAACAACAGCA---A---CAG---CATCAACAACA------GCAGCAG------CA---TCAACAACAGCAGCATCAACAAC----------AGCAACAG---CATCA---GC---A------ACTG---CAGCAG---CATCAGCAACAG---CAACAG-----------------CATCAACATCAGCAG-----CATCAACAA---------------CAG-------------------------C-AGCA------AC------ATCAACAACAT
droKik1 scf7180000301851:20106-20266 + CAGCAGC----------------AGCAGCGCCAGCA---G---CAG---CAGCACCAGCAGCA---GCAGCAC------CA---CCACCAGCAGCCGCAGCAGCAAC----------AGCAGCAGCAGCAACA---GC---A------A------CAGCAGCAGCAGC------AA---CAGCAG---C--------------AGCACCAACAGCAG-----CAACAGCAC------------CAGCCG--------------------------CAGCA---TTCAC------AACAACAACA-
droFic1 scf7180000454039:96081-96244 - A--CAAC----------------TGCAACAGCAGCA---G---CAGCAACAGCAGCAACAG---CACCAGCA------------GCAACAACTGCAGCAGCAGCAAC----------AGCAGCAACAGCAGCA---GC---A------G------CACCAGCAGCAAC------TG---CAGCAG---C---------AG--CA---ACAGCAGCAGCAACA--GC---AG------------CAACAATTG----------C-------------AACAGCA---GCAA-CCCT--TGCA--AC
droEle1 scf7180000491047:337879-338049 - CAGCAGC----------------AAGAGCAACAGCA---A---CAA---CAGCAGCAACAGCA---GCAGCAG------CA---GCAACAACAGCAGCAACAACAACAGCAGAC-------ACAA---CAGCA---GC---A------ACAACAACAGCAGCAGCAGC------AA---CAACAG-----------------CA---GCAGCCGCAG--------------------------CAACAACAA----------CCACAGCCCGTG-CAGCA------AA---TCCATCAACCGCAA
droRho1 scf7180000760202:71845-72002 + CAACAAC----------------AACAGCAGCAGCA---A---CAA---CAGCAGCAGCAACAACAGCAGCAG------CA---ACAACAACAGCAGCAGCAACAAC----------AGCAGCAG---CAACA---AC---A------A------CAGCAGCAGCAAC------AA---CAACAG---C--------------AGCAGCAACAACAG-----CAGCAGCAA------------CAACAG-------------------------C-AGCA------AC------AGCAACAACA-
droBia1 scf7180000302402:4220235-4220410 + CATCAGC----------------TGCAACCTCAGCACCAG---CTA---CAAGCGCTACAG---CAGCAGCAG------CA---ACAACAGCAGCAGCAGCAACAAC----------AGCAGCAG---CAGCA---ACAACA------G------CAGCAG---CAGC------AACAACAGCAA---C-----------AGCA---GCAGCAAGTGCAGCA--ACTGCAACAAGC------ACAGGAGCAGCAG-------------------C-CACT------GC------ATCAGCAGCA-
droTak1 scf7180000415785:77129-77294 + AA-TATCAGC-------------AACCGCAACAGCA---A---CAA---CAGCAACAGCAG------CAACTGCAACAGGA---GCAACACCAGCAACTGCAACAGC----------AGCAGCAG------------C---A------A------CATCAGCAACTTT------TG---CAGCAA---C---------AG--CT---GCCGCAGCAG-----CGACGG------CAAACGTACAAGGAGTATTTG-------------------C-AGCA------AC------ATCAGCAGCA-
droEug1 scf7180000409524:214427-214587 + GACCGTC-GC-------------AGCAGC---AGCA---GCAACAT---CAACAGCAGCAG---------CAG------CA---GCAACAGAATATGCATCATCATC-------AACAGCAGCAGCAGCATCA---AC---A------A------CAACAGCAGCAGC------AG---CAGCAT---A---------TG--CA---ACAGCATCAG-----CAGCAGCAT------------CAACAGCAG----------------------C-AGCA------TC------AACAGCAACAT
dm3 chrX:8949704-8949850 - CAGCAAC----------------AGCATCCAGAGTT---G---CAG---CAACAGCAACAGCA---GCAGCAA------CA---GCAACAGCAACAGCAACAGCAAC----------AGCAACAG------CA---AC---AGCAACAG------CAACAGCAACAGC------AA---CAACAG---C--------------A---GCA--------------ACAGCAG------------CAACAGCAA----------C-------------TCA---------------AGCAACAACAT
droSim2 3l:8237044-8237210 - CC-CAGCAGC-------------AGCAGCAGCAGCA---G---CAT---CAACAACAACA------GCAGCAG------CA---GCAGCAGCAGCAGCAACAACATCAGCAGAA----TATGCAT---CACCA---TC---A------ACAT---CAGCAGCAACACA------TG---CAGCAG-----------------CA---GCAGCAACAA-----------------CAACAACATCAGCAGCAGCAG-------------------C-AGCA------AC------AACAACAACAT
droSec2 scaffold_2:4572136-4572294 + CACC-GC----------------AGCAGC---AGAT---G---CAG---CAGC---AACAG---CCGCAGTAC------CA---ACAGCCGCAGCAGCAGCAGCAGC----------AGTACCAA---CCGCA---GC---AGCA---ACAA---CAGCAGCAGCAGC---AACAG---CCGCAG---C--------------AGCAGGATCAACTC--------------------------TATCAGCAGG-------------------GG-CAGCA------GA--TCTCATCAGCCATGT
droYak3 X:19447712-19447878 - CAGCAGC----------------AGCAGCAGCAGCA---G---CAG---CAACAGCAGCAACA---ACAGCAG------CAGCAGCAACAGCAGCAGCAGCAGCAGC----------AGCAGCAG---CAGCA---GCAGCA------G------CAGCAG---CAGC------AA---CAGCAGCAGC-----------AGCA---GCAGCAGCAGCAACA--ACAGCAA---------------CAACAGCAG-------------------C-AGCA------GC------AACATCAACG-
droEre2 scaffold_4784:3586549-3586708 + CAGCAAC----------------ACAACCAGCAGCA---G---CAT---CAGCAGCAGCA------GCAGCAG------CA---TCAACAGCAGCAGCAGCAGCAAC----------AGCAGCAA---CAGCA---GCAACA------G------CAGCAG---CAGCAACAACAG---CAACAG-----------------CAGCAGCAGCAACAG-----CAGCAGCAT------------CAACAGCAAC-----------------------AGCA------GC------AACAGCA--AC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CA-CAGCCGC-------------AACCGC--CAGTG---G---CAA---CAACA-CAACAA---CAGCAGCAA------CA---ACAAGTGCAGCAGCAGCACCAAC----------AGCAGCAG---CAGCAACAAC---A------A------CAACAGCAGCAGC------AG---CAACAA---C-----------AGCA---GCAGCAACAG-----------------CAATCGCTCAATGACCAAC-------------------TG-CAGCA------T----TCCATCAACGATATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.A-CAGCCGC-------------AACCGC--CAGT..............................................................................................................................................................................................................................................................................1811.0010100000000
...................................................................................................................................................................................................................................................AATGACCAAC-------------------TG-CAGCA------T----TCCATCAAC.....2711.0010010000000
.....................................................................................................................................................................................................................................................................................GCA------T----TCCATCAACGATAT1811.0010000100000
...................................G---G---CAA---CAACA-CAACAA---CAGCAG...........................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................................................................................................ACCAAC-------------------TG-CAGCA------T----TCCATCAACGATA.2711.0010010000000
.......................................................................AA------CA---ACAAGTGCAGCAGCA..............................................................................................................................................................................................................1911.0010010000000
........................................................................A------CA---ACAAGTGCAGCAGCAGCACCAAC----------............................................................................................................................................................................................2611.0010010000000
........................................................................................................................................................................................A---C-----------AGCA---GCAGCAACAG-----------------CAATCGCTCAATG..........................................................2911.0010010000000
..................................................................................................AGCACCAAC----------AGCAGCAG---CAGCAACAA........................................................................................................................................................................2620.5010000100000
.....................................................................................................................................ACAAC---A------A------CAACAGCAGCAGC------...................................................................................................................................20200.1530300000000
....................................................................................................CACCAAC----------AGCAGCAG---CAGCAAC..........................................................................................................................................................................2270.1410000001000
........................................................................................................................................AC---A------A------CAACAGCAGCAGC------AG---CAACAA---C-----------A........................................................................................................2790.1110100000000
....................................................................................................................................................................................AACAA---C-----------AGCA---GCAGCAACAG-----------------C......................................................................21200.1020200000000
..............................................................................................................................................................CAGCAGCAGC------AG---CAACAA---C-----------.........................................................................................................19200.1020000200000
..........................................................................................................C----------AGCAGCAG---CAGCAACAAC---....................................................................................................................................................................19200.1020000200000
................................................................................................GCAGCACCAAC----------AGCAGCAG---CAG..............................................................................................................................................................................22100.1010000100000
......................................................................................................................................CAAC---A------A------CAACAGCAGCAGC------AG---C.............................................................................................................................22200.1020000200000
.............................................................................................................................................................ACAGCAGCAGC------AG---CAACA.........................................................................................................................18200.1020000200000
........................................................................................................................................AC---A------A------CAACAGCAGCAGC------AG---CAACAA---C-----------.........................................................................................................26100.1010100000000
......................................................................................................................GCAGCAG---CAGCAACAAC---A------A------CAAC..................................................................................................................................................23200.1020200000000
............................................................................................................................G---CAGCAACAAC---A------A------CAACAGC...............................................................................................................................................20200.1020200000000
............................................................................................................................................................AACAGCAGCAGC------AG---CAACAA---C-----------AGCA---GCA...............................................................................................28140.0710100000000
..........................................................................................GCAGCAGCAGCACCAAC----------AGCA........................................................................................................................................................................................21140.0710100000000
.........................................................................................................AC----------AGCAGCAG---CAGCAACAAC---A------A------CAAC..................................................................................................................................................26140.0710010000000
...............................................................................................AGCAGCACCAAC----------AGCAGC......................................................................................................................................................................................18160.0610100000000
..............................................................................................................................................................CAGCAGCAGC------AG---CAACAA---C-----------AGCA---G.................................................................................................24200.0510100000000
......................................................................................................CCAAC----------AGCAGCAG---CAGCAAC..........................................................................................................................................................................20200.0510010000000
......................................................................................................CCAAC----------AGCAGCAG---CAGCAA...........................................................................................................................................................................19200.0510000100000
..............................................................................................................................................................................AG---CAACAA---C-----------AGCA---GCAGCAA...........................................................................................20200.0510000100000
.................................................................................................................................AGCAACAAC---A------A------CAACAGCAGCAGC------...................................................................................................................................24200.0510010000000
.......................................................................................................................................AAC---A------A------CAACAGCAGCAGC------AG---..............................................................................................................................20200.0510000100000
......................................................................................................................................CAAC---A------A------CAACAGCAGCAGC------AG---CAAC..........................................................................................................................25200.0510000100000
...................................................................................................................................................................GCAGC------AG---CAACAA---C-----------AGCA---GCA...............................................................................................21200.0510010000000
.................................................................................................................................................................CAGCAGC------AG---CAACAA---C-----------AGCA---GCAG..............................................................................................24200.0510100000000
.......................................................................................................................................AAC---A------A------CAACAGCAGCAGC------AG---C.............................................................................................................................21200.0510010000000
..................................................................................................................................................................AGCAGC------AG---CAACAA---C-----------AGCA---..................................................................................................19200.0510000100000
................................................................................................................................................................GCAGCAGC------AG---CAACAA---C-----------AGCA---GC................................................................................................23200.0510100000000
.....................................................A-CAACAA---CAGCAGCAA------CA---ACA..........................................................................................................................................................................................................................21200.0510100000000
.......................................................................................................................CAGCAG---CAGCAACAAC---A------A------CA....................................................................................................................................................20200.0510000001000
...............................................................................................................................................................AGCAGCAGC------AG---CAACAA---C-----------AGCA---G.................................................................................................23200.0510100000000
...................................................................................................................................CAACAAC---A------A------CAACAGCAGCAGC------AG---..............................................................................................................................24200.0510100000000
..........................................................................................................C----------AGCAGCAG---CAGCAACAAC---A------A------CAA...................................................................................................................................................24200.0510100000000
................................................................................................................................CAGCAACAAC---A------A------CAACAGCA..............................................................................................................................................20200.0510100000000
...................................................................................................................................CAACAAC---A------A------CAACAGCAGCA...........................................................................................................................................20200.0510100000000
.................................................................................................................................................................CAGCAGC------AG---CAACAA---C-----------AGCA---GC................................................................................................22200.0510100000000
......................................................................................................................................CAAC---A------A------CAACAGCAGCAGC------...................................................................................................................................19200.0510000100000
..............................................................................................................................................................CAGCAGCAGC------AG---CAACAA---C-----------AGCA---GCAGCA............................................................................................29200.0510001000000
.............................................................................................................................................A------A------CAACAGCAGCAGC------AG---CAAC..........................................................................................................................21200.0510010000000
.................................................................................................................................AGCAACAAC---A------A------CAACAGCAGCA...........................................................................................................................................22200.0510010000000
...............................................................................................................................................................AGCAGCAGC------AG---CAACAA---C-----------AGCA---GCA...............................................................................................25200.0510100000000
..........................................................................................................................CAG---CAGCAACAAC---A------A------CAACAGCAGCA...........................................................................................................................................26200.0510010000000
....................................................................................................................................AACAAC---A------A------CAACAGCAGCAG..........................................................................................................................................20200.0510100000000
..................................................................................................................................GCAACAAC---A------A------CAACAGCAGCAGC------AG---T.............................................................................................................................26200.0510100000000
droPer2
CC-CAGCCGC-------------AACCGC--CAGTG---G---CAA---CAACA-CAACAA---CAGCAGCAA------CA---ACAAGTGCAGCAGCAGCACCAAC----------AGCAGCAG---CAGCA---AC---A------A------CAACAGCAGCAGC------AA---CAACAA---C---------AG--CA---ACAACAGCAG-----CAACAG------CAATCGCTCAATGACCAAC-------------------TG-CAGCA------T----TCCATCAACGATATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................GACCAAC-------------------TG-CAGCA------T----TCCATCAAC.....2411.001010000
....................................................................................................................................................................................AACAA---C---------AG--CA---ACAACAGCAG-----CAACAG------.......................................................................2650.201010000
....................................................................................................CACCAAC----------AGCAGCAG---CAGCA---AC---A------.............................................................................................................................................................2370.141001000
.......................................................................................................................................................................................AA---C---------AG--CA---ACAACAGCAG-----CAACAG------.......................................................................2390.111010000
...............................................................................................................................................................................A---CAACAA---C---------AG--CA---ACAACAGCAG-----C..................................................................................23110.091001000
..................................................................................................AGCACCAAC----------AGCAGCAG---CAGC.............................................................................................................................................................................21150.071001000
...........................................................................................................................AG---CAGCA---AC---A------A------CAACAGCAG.............................................................................................................................................20200.051010000
.......................................................................................................................................................................................AA---C---------AG--CA---ACAACAGCAG-----CAAC...............................................................................21200.051010000
..................................................................................................................................................................AGCAGC------AA---CAACAA---C---------AG--CA---A.................................................................................................20200.051010000
.......................................................................................................................CAGCAG---CAGCA---AC---A------A------CAACAGCAGCA...........................................................................................................................................26200.051001000
droWil2
CAGCAGC----------------AACAACAGCAGCA---G---CAG---CAACAGCAACAACA---GCAGCAG------CA---ACAACAACAGCAGCAACAACAAC----------AGCAGCAGCAGCAACA---GC---A------A------CAACAGCAGCAGC------AA---CAACAA---C--------------AGCAGCAACAACAA-----CAGCAGCAG------------CAACAACAG----------C-------------AAC---------------AGCAACAACAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................GCAGCAACAACAA-----CAGCA..............................................................................18200.15300030
.............................................................................................GCAGCAACAACAAC----------AGCA........................................................................................................................................................................................18200.15300030
...CAGC----------------AACAACAGCAGCA---G---CAG---C...............................................................................................................................................................................................................................................................22200.10200020
.....................................................................................................................................................................................................................ACAA-----CAGCAGCAG------------CAACAAC.......................................................20200.10200002
...........................................CAG---CAACAGCAACAACA---GCAGCAG------CA---A............................................................................................................................................................................................................................27200.05101000
..........................................................................................ACAGCAGCAACAACAAC----------AGCA........................................................................................................................................................................................21200.05100001
.......................................G---CAG---CAACAGCAACAACA---GCAGCAG------C.................................................................................................................................................................................................................................26200.05101000
............................................................................................................................GCAGCAACA---GC---A------A------CAACAGCAGCAGC------...................................................................................................................................26200.05101000
..........................................................................................................................CAGCAGCAACA---GC---A------A------CAACAGCAG.............................................................................................................................................24200.05100010
.................................................................................................................................AACA---GC---A------A------CAACAGCAGCAGC------AA---..............................................................................................................................23200.05101000
........................................................................................................................................................................................A---C--------------AGCAGCAACAACAA-----CAGCA..............................................................................21200.05100001
............................................................................................................................................................AACAGCAGCAGC------AA---CAACA.........................................................................................................................19200.05100001
............................CAGCAGCA---G---CAG---CAACAGCA........................................................................................................................................................................................................................................................20200.05100010
.............................................................................................................................CAGCAACA---GC---A------A------CAACAGCAGCAGC------AA---..............................................................................................................................27200.05101000
..................................CA---G---CAG---CAACAGCAACAACA---GCAG...........................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................AGCAGCAACAACAA-----CAGCAG.............................................................................20200.05100010
..................................................AACAGCAACAACA---GCAGCAG------CA---ACA..........................................................................................................................................................................................................................25200.05100010
.........................CAACAGCAGCA---G---CAG---CAACAGCAA.......................................................................................................................................................................................................................................................24200.05101000
........................................................................................CAACAGCAGCAACAACAAC----------AGCAGC......................................................................................................................................................................................25200.05100010
.............................................................CA---GCAGCAG------CA---ACAACAACAGCAGCA..............................................................................................................................................................................................................26200.05100001
................................................................................................................................CAACA---GC---A------A------CAACAGCAGCAGC------AA---CAA...........................................................................................................................27200.05100010
................................................................................................................................................................................................................CAACAACAA-----CAGCAGCAG------------C.............................................................19200.05101000
.....GC----------------AACAACAGCAGCA---G---CAG---C...............................................................................................................................................................................................................................................................20200.05100010
..............................................................................................................................................................CAGCAGCAGC------AA---CAACAA---C--------------AGCAGCA...............................................................................................26200.05100001
............................................................................................AGCAGCAACAACAAC----------AGCAG.......................................................................................................................................................................................20200.05100010
.................................................CAACAGCAACAACA---GCAGCAG------CA---ACAA.........................................................................................................................................................................................................................27200.05100010
.................................................................................................................................AACA---GC---A------A------CAACAGCAGCAGC------AA---CA............................................................................................................................25200.05100010
..........................................................................................................C----------AGCAGCAGCAGCAACA---GC---A------.............................................................................................................................................................20200.05100010
..................................................AACAGCAACAACA---GCAGCAG------CA---A............................................................................................................................................................................................................................23200.05101000
................................................................................................GCAACAACAAC----------AGCAGCAGCAGCA...............................................................................................................................................................................24200.05100010
....................................................................................................................................................................................................................AACAA-----CAGCAGCAG------------CAACAA........................................................20200.05100010
...........................................................AACA---GCAGCAG------CA---ACAACA.......................................................................................................................................................................................................................19200.05100001
.......................................................................................................................................................................................................................AA-----CAGCAGCAG------------CAACAACAG----------C-------------AAC---------------A..........25200.05100100
........................ACAACAGCAGCA---G---CAG---CAACAGC.........................................................................................................................................................................................................................................................23200.05100010
droVir3
CTA--TTCAAATATACCAGCAGCAACAACAGCAGCA---G---CAA---CAGCAACAACA------GCAGCAG------CA---ACAGCAACAACAGCAGCAGCAAC----------AGCAAC------------------A------A------CAGCAGCAGCAAC------AG---CAACAA---C-----------AGCA---GCAGCAACAG-----------------CAACAACACCAGCAGCAACAG-------------------C-AGCA------GC------AACAGCAACA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........AAATATACCAGCAGCAACAAC....................................................................................................................................................................................................................................................................................21101.80180010000000000000000000000100005010010000000000000000000000000000
........AAATATACCAGCAGCAACAACAGCA................................................................................................................................................................................................................................................................................25101.7017001000000000000000000000090202000030000000000000000000000000000
........AAATATACCAGCAGCAACAA.....................................................................................................................................................................................................................................................................................20101.6016000000000000000000000000070116000010000000000000000000000000000
........AAATATACCAGCAGCAACAACA...................................................................................................................................................................................................................................................................................22101.1011000000000000000000000000060203000000000000000000000000000000000
........AAATATACCAGCAGCAACA......................................................................................................................................................................................................................................................................................19120.425001000000000000000000000030000010000000000000000000000000000000
........AAATATACCAGCAGCAACAACAGC.................................................................................................................................................................................................................................................................................24100.404000000000000000000000000030001000000000000000000000000000000000
........AAATATACCAGCAGCAACAACAG..................................................................................................................................................................................................................................................................................23100.404000000000000000000000000020000000020000000000000000000000000000
....................AGCAACAACAGCAGCA---G---CA....................................................................................................................................................................................................................................................................19200.255000000000000000000001010000030000000000000000000000000000000000
CTA--TTCAAATATACCAGCAGCAACAACA...................................................................................................................................................................................................................................................................................28100.202002000000000000000000000000000000000000000000000000000000000000
CTA--TTCAAATATACCAGCAGCAAC.......................................................................................................................................................................................................................................................................................24110.182002000000000000000000000000000000000000000000000000000000000000
.................AGCAGCAACAACAGCAGC..............................................................................................................................................................................................................................................................................18200.153000000000000000002000000000000000000000100000000000000000000000
..A--TTCAAATATACCAGCAGCAACAAC....................................................................................................................................................................................................................................................................................25100.101001000000000000000000000000000000000000000000000000000000000000
..................................................AGCAACAACA------GCAGCAG------CA---A............................................................................................................................................................................................................................20200.102000000000000000000000000000000000000101000000000000000000000000
.....TTCAAATATACCAGCAGCAACAAC....................................................................................................................................................................................................................................................................................24100.101001000000000000000000000000000000000000000000000000000000000000
.TA--TTCAAATATACCAGCAGCAACAACA...................................................................................................................................................................................................................................................................................27100.101001000000000000000000000000000000000000000000000000000000000000
........AAATATACCAGCAGCAACAACAT..................................................................................................................................................................................................................................................................................23100.101000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................AA---C-----------AGCA---GCAGCAACAG-----------------CA.....................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
........AAATATACCAGCAGCAACAACAGCAG...............................................................................................................................................................................................................................................................................26100.101000000000000000000000000000000000010000000000000000000000000000
......................................................................................AGCAACAACAGCAGCAGCAA.......................................................................................................................................................................................................20200.102000000000000000000000000000000000000101000000000000000000000000
...........TATACCAGCAGCAACAACAG..................................................................................................................................................................................................................................................................................20100.101000000000000000000000000000000010000000000000000000000000000000
..A--TTCAAATATACCAGCAGCAACAACA...................................................................................................................................................................................................................................................................................26100.101001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................A------A------CAGCAGCAGCAAC------AG---CA............................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
.............................AGCAGCA---G---CAA---CAGCAACAAC......................................................................................................................................................................................................................................................21200.102000000000000000000000000000010000000100000000000000000000000000
...........TATACCAGCAGCAACAACAGCA................................................................................................................................................................................................................................................................................22100.101000000000000000000000000000100000000000000000000000000000000000
........AAATATACCAGCAGCAACAACAGCAA...............................................................................................................................................................................................................................................................................26100.101000000000000000000000000000000000010000000000000000000000000000
........AAATATACCAGCAGCAACAACAGCAGCA---..........................................................................................................................................................................................................................................................................28100.101000000000000000000000000000000000010000000000000000000000000000
........AAATATACCAGCAGCAACAACAGA.................................................................................................................................................................................................................................................................................24100.101000000000000000000000000001000000000000000000000000000000000000
.TA--TTCAAATATACCAGCAGCA.........................................................................................................................................................................................................................................................................................21110.091001000000000000000000000000000000000000000000000000000000000000
CTA--TTCAAATATACCAGC.............................................................................................................................................................................................................................................................................................18110.091001000000000000000000000000000000000000000000000000000000000000
CTA--TTCAAATATACCAGCAGCA.........................................................................................................................................................................................................................................................................................22110.091001000000000000000000000000000000000000000000000000000000000000
CTA--TTCAAATATACCAGCAGC..........................................................................................................................................................................................................................................................................................21110.091000010000000000000000000000000000000000000000000000000000000000
CTA--TTCAAATATACCAGCAGCAACA......................................................................................................................................................................................................................................................................................25110.091001000000000000000000000000000000000000000000000000000000000000
............ATACCAGCAGCAACAACA...................................................................................................................................................................................................................................................................................18120.081001000000000000000000000000000000000000000000000000000000000000
.....TTCAAATATACCAGCAGCAAA.......................................................................................................................................................................................................................................................................................21120.081000000000000000000000001000000000000000000000000000000000000000
..A--TTCAAATATACCAGCAGCAAC.......................................................................................................................................................................................................................................................................................22120.081001000000000000000000000000000000000000000000000000000000000000
..A--TTCAAATATACCAGCAGCA.........................................................................................................................................................................................................................................................................................20120.081001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CAACAACACCAGCAGCAACA...................................................20150.071000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAACACCAGCAGCAACAG-------------------C-A............................20170.061000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................CAGCAACAG-----------------CAACAACACC.............................................................19190.051000000000000000100000000000000000000000000000000000000000000000
...............................................................................CA---ACAGCAACAACAGCAGCAGC.........................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................AGCA---GCAGCAACAG-----------------CAACA..................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................AG---CAACAA---C-----------AGCA---GCAGCAA...........................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................G---CAACAA---C-----------AGCA---GCAGCAAC..........................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.......................................................................AG------CA---ACAGCAACAACAGCAGCAGCA........................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AC----------AGCAAC------------------A------A------CAGCAGCAGC............................................................................................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
.........................CAACAGCAGCA---G---CAA---CAGC............................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CAA---C-----------AGCA---GCAGCAACAG-----------------CAA....................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................AC------AG---CAACAA---C-----------AGCA---GCAGC.............................................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
..........................AACAGCAGCA---G---CAA---CAGCAACAA.......................................................................................................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................CAAC----------AGCAAC------------------A------A------CAGCAGCAGC............................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
....................AGCAACAACAGCAGCA---G---C.....................................................................................................................................................................................................................................................................18200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................AGCAAC----------AGCAAC------------------A------A------CAGCAGCAGCA...........................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................CAACA------GCAGCAG------CA---ACAGC........................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................AAC------------------A------A------CAGCAGCAGCAAC------A..................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
........................................................AACA------GCAGCAG------CA---ACAGCAACAA...................................................................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
.................AGCAGCAACAACAGCAGCA---G---CAA---................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
................CAGCAGCAACAACAGCAGCA---..........................................................................................................................................................................................................................................................................20200.051000000100000000000000000000000000000000000000000000000000000000
.................................GCA---G---CAA---CAGCAACAACA------...............................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGCAGCAACAG-------------------C-AGCA------GC------AACAG......23200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AACAG-------------------C-AGCA------GC------AACAGCAA...20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCAGCAACAG-------------------C-AGCA------GC------AACA.......21200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................AC------------------A------A------CAGCAGCAGCAAC------AG---CA............................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................AGCAACAACAGCAGCAGCAAC----------AGCA........................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................C------------------A------A------CAGCAGCAGCAAC------AG---CAA...........................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................ACAA---C-----------AGCA---GCAGCAACAG-----------------CA.....................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................CAACAACAGCAGCAGCAAC----------AG..........................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................AC------AG---CAACAA---C-----------AGCA---GCAGCAAC..........................................................................................23200.051000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CAACAG-------------------C-AGCA------GC------AACAGCA....20200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................GCAG------CA---ACAGCAACAACA.................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
................................AGCA---G---CAA---CAGCAACAAC......................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................AC----------AGCAAC------------------A------A------CAGCAGCAGCAAC------...................................................................................................................................23200.051000000000000000000000010000000000000000000000000000000000000000
....................................................CAACAACA------GCAGCAG------CA---ACA..........................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
...............................CAGCA---G---CAA---CAGCAACAACA------GCAGC..........................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................GCAACAG-------------------C-AGCA------GC------AACAGC.....20200.051000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................AGCAAC------------------A------A------CAGCAGCAGCAAC------AG---CA............................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................ACAGCAGCAGCAAC----------AGCAAC------------------A------A------CAG...................................................................................................................................................25200.051000000000000010000000000000000000000000000000000000000000000000
.....................................................................................CAGCAACAACAGCAGCAGCAA.......................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................A---ACAGCAACAACAGCAGCAGCA........................................................................................................................................................................................................22200.051000000000000000010000000000000000000000000000000000000000000000
........................ACAACAGCAGCA---G---CAA---CAGCAACA........................................................................................................................................................................................................................................................24200.051000000000000000000100000000000000000000000000000000000000000000
.................AGCAGCAACAACAGCAGCA---..........................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
....................................................CAACAACA------GCAGCAG------CA---ACAG.........................................................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
.................................GCA---G---CAA---CAGCAACAACA------GCAGCA.........................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
......................................................................CAG------CA---ACAGCAACAACAGCAG.............................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AACAA---C-----------AGCA---GCAGCAACA.........................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................C------AG---CAACAA---C-----------AGCA---GCAGCAA...........................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
............................................AA---CAGCAACAACA------GCAGCAG------CA---.............................................................................................................................................................................................................................22200.051000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................GCAAC------------------A------A------CAGCAGCAGCAAC------...................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................ACA------GCAGCAG------CA---ACAGCAACAACAG................................................................................................................................................................................................................25200.051000000000000010000000000000000000000000000000000000000000000000
.....................................................................GCAG------CA---ACAGCAACAACAGCAGCA...........................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................AGCAAC------AG---CAACAA---C-----------AGCA---GCAGCA............................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...........................ACAGCAGCA---G---CAA---CAGCAACAACA------G..............................................................................................................................................................................................................................................25200.051000000000000010000000000000000000000000000000000000000000000000
..................GCAGCAACAACAGCAGCA---G---C.....................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................AGCAGCAGCAAC------AG---CAACA.........................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
...................................................................CAGCAG------CA---ACAGCAACAACAGCAGC............................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000010000
................................AGCA---G---CAA---CAGCAACAACA------GCAGCAG------C.................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................CAACA------GCAGCAG------CA---ACAGCAA......................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.................................................CAGCAACAACA------GCAGCAG------CA---A............................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................A------GCAGCAG------CA---ACAGCAACAAC..................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................AG-----------------CAACAACACCAGCAGC.......................................................18200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................CAGCAAC----------AGCAAC------------------A------A------CAGCAG................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................ACAGCAACAACAGCAGCAGCAAC----------............................................................................................................................................................................................23200.051000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................C----------AGCAAC------------------A------A------CAGCAGCAGCAA..........................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
...................................................GCAACAACA------GCAGCAG------CA---AC...........................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
..............................GCAGCA---G---CAA---CAGCAACAACA------GCA............................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CAAC------AG---CAACAA---C-----------AGCA---GCAGC.............................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
...................................................................................................GCAGCAAC----------AGCAAC------------------A------A------CAGCAGCA..............................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................AAC------AG---CAACAA---C-----------AGCA---GCAGC.............................................................................................21200.051000000000001000000000000000000000000000000000000000000000000000
.......................AACAACAGCAGCA---G---CAA---CAGCA...........................................................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
.......................................................................................GCAACAACAGCAGCAGCAAC----------............................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
......................................................ACAACA------GCAGCAG------CA---ACAGCA.......................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAACAGCAGCAGCAAC----------AGCAA.......................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................CAAC------------------A------A------CAGCAGCAGCAAC------AG---..............................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................AG---CAACAA---C-----------AGCA---GCAGCAACAG-----------------CA.....................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...........................................CAA---CAGCAACAACA------GCAGCAG------C.................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................GCAGCAACAG-------------------C-AGCA------GC------AACAGCAAC..26200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A------CAGCAGCAGCAAC------AG---CAACAA---C-----------AG.......................................................................................................25200.051000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................ACCAGCAGCAACAG-------------------C-AGCA------GC------A..........22200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AGCAAC------------------A------A------CAGCAGCAGCAA..........................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................ACAGCAACAACAGCAGCAGC.........................................................................................................................................................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
..........................................................................................ACAACAGCAGCAGCAAC----------AGCA........................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACAG-------------------C-AGCA------GC------AACAGCAACA-21200.051000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CAACAA---C-----------AGCA---GCAGCAACAG-----------------.......................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
..................................CA---G---CAA---CAGCAACAACA------GCAG...........................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CAGCAGC----------------AGCAACAGCAGCA---G---CAG---CAACAGCGGCAGCA---GCAGCAA------CA---GCAACAGCAGCAGCAGCAGCAAC----------AGCAGCAACAGCAGCA---GC---A------G------CAACAGCAGCAGC------AG---CAGCAA---C---------AG--CA---GCAGCAGCAG-----CAACAGCAG------------CAGCAGCAG----------C-------------AACAGCA---GCA---GCAACAGCA--GTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................AACAGCAGCAGCAGCAGCA........................................................................................................................................................................................................19200.204400000
...................................................................................................................................................................GCAGC------AG---CAGCAA---C---------AG--CA---GCAGC.............................................................................................23200.102200000
..................................CA---G---CAG---CAACAGCGGCAGCA---GC.............................................................................................................................................................................................................................................22130.081000010
............................................AG---CAACAGCGGCAGCA---GCAGCA.........................................................................................................................................................................................................................................22140.071000010
...........................................CAG---CAACAGCGGCAGCA---GCAGC..........................................................................................................................................................................................................................................22180.061000010
.......................................................................................................................................................................................................................AG-----CAACAGCAG------------CAGCAGCAG----------C-------------AACAGC.......................27200.051100000
........................................................................................................AAC----------AGCAGCAACAGCAGCA---GC---A------.............................................................................................................................................................22200.051010000
..........................................................................................................C----------AGCAGCAACAGCAGCA---GC---A------G------......................................................................................................................................................21200.051000100
.......................................................................AA------CA---GCAACAGCAGCAGCAGCA...........................................................................................................................................................................................................22200.051000010
............................................AG---CAACAGCGGCAGCA---GCAGC..........................................................................................................................................................................................................................................21200.051001000
.............................................................................................................................................A------G------CAACAGCAGCAGC------AG---CAGCAA---C---------AG--C......................................................................................................27200.051100000
....................................................................................................................................................................................AGCAA---C---------AG--CA---GCAGCAGCAG-----CAACAGC............................................................................27200.051100000
........................GCAACAGCAGCA---G---CAG---CAACA...........................................................................................................................................................................................................................................................21200.051100000
....................................................................................................................................................................................................................................................................................AACAGCA---GCA---GCAACAGCA--..19200.051010000
droGri2
CAGCACC----------------AGCAACAACAACACTTA---CAG---CAACAACAACAA---CAGCAGCAA------CA---ACAACAGCAGCAACAGCAACAAC----------AGCAGCAG---CAGCA---ACAACA------A------CAGCAGCAGCAGC------CA---CAACAA---C-----------ACCA---GATGCAAATGCAATT--GC---AG------------CAACAACAG----------C---------TA-CAGCA------GC------AGCAA--ATACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................AACAAC----------AGCAGCAG---CAGCA---ACA......................................................................................................................................................................22200.10220
...................................................ACAACAACAA---CAGCAGCAA------CA---.............................................................................................................................................................................................................................21200.10220
...........................................................................................................................................ACA------A------CAGCAGCAGCAGC------CA---..............................................................................................................................19200.10220
.............................................................................................GCAACAGCAACAAC----------AGCAGCA.....................................................................................................................................................................................21200.10220
..................................................................GCAGCAA------CA---ACAACAGCAGCAACA..............................................................................................................................................................................................................24200.05110
...........................................................................................................................AG---CAGCA---ACAACA------A------CAGCAGC...............................................................................................................................................21200.05110
............................................................A---CAGCAGCAA------CA---ACAACAGCA....................................................................................................................................................................................................................21200.05110
.......................................................................................................................CAGCAG---CAGCA---ACAACA------A------CAGCA.................................................................................................................................................23200.05101
................................................................................................ACAGCAACAAC----------AGCAGCAG---CA...............................................................................................................................................................................21200.05101
droAna3
CAGCAGC----------------AGCAGCAGCAGTT---G---CAG---CAGCAACACTT------GCAACAG------CA---ACAGATGCAGCAGCAGCAGCAAC----------TGCAGCAA---CAGCA---AC---A------G------CAACT---------------G---CAACAG---CAGCAGCAGCAA--CTGCAGCA--------------ACAGCAACAACCTTCTCCCAT---GCTGG--GCCGACC----------TG-CTGCA------GT--TGCCACCGAC-ATGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................GCAACAACCTTCTCCCAT---GCTGG--GCC...............................................2611.001010000
..................................................................................................AGCAGCAAC----------TGCAGCAA---CAG..............................................................................................................................................................................2040.251100000
................................................................................................................................................................................................AGCAGCAA--CTGCAGCA--------------ACAG.............................................................................2040.251100000
.AGCAGC----------------AGCAGCAGCAGTT---G---CAG---CA..............................................................................................................................................................................................................................................................2560.171100000
...............................................................................................................................................................................................CAGCAGCAA--CTGCAGCA--------------AT...............................................................................19140.071010000
.................................................................................................CAGCAGCAAC----------TGCAGCAA---T................................................................................................................................................................................19140.071010000
........................................................................................................AAC----------TGCAGCAA---CAGCA---AC---A------G------CAG...................................................................................................................................................23200.051010000
droBip1
CAGCAGC----------------ATCAACAACAGCA---A---CAG---CATCAACAACA------GCAGCAG------CA---TCAACAACAGCAGCATCAACAAC----------AGCAACAG---CATCA---GC---A------ACTG---CAGCAG---CATCAGCAACAG---CAACAG-----------------CATCAACATCAGCAG-----CATCAACAA---------------CAG-------------------------C-AGCA------AC------ATCAACAACATSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCAGC----------------AGCAGCGCCAGCA---G---CAG---CAGCACCAGCAGCA---GCAGCAC------CA---CCACCAGCAGCCGCAGCAGCAAC----------AGCAGCAGCAGCAACA---GC---A------A------CAGCAGCAGCAGC------AA---CAGCAG---C--------------AGCACCAACAGCAG-----CAACAGCAC------------CAGCCG--------------------------CAGCA---TTCAC------AACAACAACA-SizeHit CountTotal NormTotal
No Reads
droFic1
A--CAAC----------------TGCAACAGCAGCA---G---CAGCAACAGCAGCAACAG---CACCAGCA------------GCAACAACTGCAGCAGCAGCAAC----------AGCAGCAACAGCAGCA---GC---A------G------CACCAGCAGCAAC------TG---CAGCAG---C---------AG--CA---ACAGCAGCAGCAACA--GC---AG------------CAACAATTG----------C-------------AACAGCA---GCAA-CCCT--TGCA--ACSizeHit CountTotal NormTotal
No Reads
droEle1
CAGCAGC----------------AAGAGCAACAGCA---A---CAA---CAGCAGCAACAGCA---GCAGCAG------CA---GCAACAACAGCAGCAACAACAACAGCAGAC-------ACAA---CAGCA---GC---A------ACAACAACAGCAGCAGCAGC------AA---CAACAG-----------------CA---GCAGCCGCAG--------------------------CAACAACAA----------CCACAGCCCGTG-CAGCA------AA---TCCATCAACCGCAASizeHit CountTotal NormTotal
No Reads
droRho1
CAACAAC----------------AACAGCAGCAGCA---A---CAA---CAGCAGCAGCAACAACAGCAGCAG------CA---ACAACAACAGCAGCAGCAACAAC----------AGCAGCAG---CAACA---AC---A------A------CAGCAGCAGCAAC------AA---CAACAG---C--------------AGCAGCAACAACAG-----CAGCAGCAA------------CAACAG-------------------------C-AGCA------AC------AGCAACAACA-SizeHit CountTotal NormTotal
No Reads
droBia1
CATCAGC----------------TGCAACCTCAGCACCAG---CTA---CAAGCGCTACAG---CAGCAGCAG------CA---ACAACAGCAGCAGCAGCAACAAC----------AGCAGCAG---CAGCA---ACAACA------G------CAGCAG---CAGC------AACAACAGCAA---C-----------AGCA---GCAGCAAGTGCAGCA--ACTGCAACAAGC------ACAGGAGCAGCAG-------------------C-CACT------GC------ATCAGCAGCA-SizeHit CountTotal NormTotal
No Reads
droTak1
AA-TATCAGC-------------AACCGCAACAGCA---A---CAA---CAGCAACAGCAG------CAACTGCAACAGGA---GCAACACCAGCAACTGCAACAGC----------AGCAGCAG------------C---A------A------CATCAGCAACTTT------TG---CAGCAA---C---------AG--CT---GCCGCAGCAG-----CGACGG------CAAACGTACAAGGAGTATTTG-------------------C-AGCA------AC------ATCAGCAGCA-SizeHit CountTotal NormTotal
No Reads
droEug1
GACCGTC-GC-------------AGCAGC---AGCA---GCAACAT---CAACAGCAGCAG---------CAG------CA---GCAACAGAATATGCATCATCATC-------AACAGCAGCAGCAGCATCA---AC---A------A------CAACAGCAGCAGC------AG---CAGCAT---A---------TG--CA---ACAGCATCAG-----CAGCAGCAT------------CAACAGCAG----------------------C-AGCA------TC------AACAGCAACATSizeHit CountTotal NormTotal
No Reads
dm3
CAGCAAC----------------AGCATCCAGAGTT---G---CAG---CAACAGCAACAGCA---GCAGCAA------CA---GCAACAGCAACAGCAACAGCAAC----------AGCAACAG------CA---AC---AGCAACAG------CAACAGCAACAGC------AA---CAACAG---C--------------A---GCA--------------ACAGCAG------------CAACAGCAA----------C-------------TCA---------------AGCAACAACATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.......................................................................AA------CA---GCAACAGCAACAGC...............................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AGCAACAGCAACAGCAAC----------AGCAACA.....................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CAGCAACAGCAACAGCAAC----------AGCAAC......................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................AGCAACAGCAACAGCAAC----------AGCAAC......................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................C---AGCAACAG------CAACAGCAACAGC------AA---C.............................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................AGCA---GCAGCAA------CA---GCAACAGC.....................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................A---GCAGCAA------CA---GCAACAGC.....................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AACAGCAACAGCAACAGC.........................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ACAGCAACAGCAACAGCA........................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ACAGCAACAGCAAC----------AGCA........................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AA---CAACAG---C--------------A---GCA--------------ACAGCAG------------C.............................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droSim2
CC-CAGCAGC-------------AGCAGCAGCAGCA---G---CAT---CAACAACAACA------GCAGCAG------CA---GCAGCAGCAGCAGCAACAACATCAGCAGAA----TATGCAT---CACCA---TC---A------ACAT---CAGCAGCAACACA------TG---CAGCAG-----------------CA---GCAGCAACAA-----------------CAACAACATCAGCAGCAGCAG-------------------C-AGCA------AC------AACAACAACATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................CAGCAACACA------TG---CAGCAG-----------------CA---GC................................................................................................2211.00100000000001000000
..............................................................................................................AGAA----TATGCAT---CACCA---TC---A------ACAT---......................................................................................................................................................2311.00100000100000000000
............................................................................................................................................................AGCAGCAACACA------TG---CAGCAG-----------------CA---..................................................................................................2211.00100000000001000000
................................AGCA---G---CAT---CAACAACAAC......................................................................................................................................................................................................................................................1880.88700000700000000000
.................................................................................................................................................................................................................AGCAACAA-----------------CAACAACATCAGCA.........................................................2240.25100010000000000000
CC-CAGCAGC-------------AGCAGCAGCAGCA---..........................................................................................................................................................................................................................................................................22160.13220000000000000000
............................................................................................................................................................................................................................................ACAACATCAGCAGCAG.....................................................16140.07100000000001000000
..............................................................................................CAGCAACAACATCAGCA..................................................................................................................................................................................................17200.05100000010000000000
droSec2
CACC-GC----------------AGCAGC---AGAT---G---CAG---CAGC---AACAG---CCGCAGTAC------CA---ACAGCCGCAGCAGCAGCAGCAGC----------AGTACCAA---CCGCA---GC---AGCA---ACAA---CAGCAGCAGCAGC---AACAG---CCGCAG---C--------------AGCAGGATCAACTC--------------------------TATCAGCAGG-------------------GG-CAGCA------GA--TCTCATCAGCCATGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................CA---ACAA---CAGCAGCAGCAGC---AA....................................................................................................................................21200.0510010
.........................................................................................................................................C---AGCA---ACAA---CAGCAGCAGCAGC---A.....................................................................................................................................23200.0510010
.....................................................................................................................................................CAA---CAGCAGCAGCAGC---AACAG---C.............................................................................................................................22200.0510010
................................................................................................................................................A---ACAA---CAGCAGCAGCAGC---A.....................................................................................................................................19200.0511000
droYak3
CAGCAGC----------------AGCAGCAGCAGCA---G---CAG---CAACAGCAGCAACA---ACAGCAG------CAGCAGCAACAGCAGCAGCAGCAGCAGC----------AGCAGCAG---CAGCA---GCAGCA------G------CAGCAG---CAGC------AA---CAGCAGCAGC-----------AGCA---GCAGCAGCAGCAACA--ACAGCAA---------------CAACAGCAG-------------------C-AGCA------GC------AACATCAACG-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................CAGCAGCAGCAGCAGCAGC----------AGCAGCAG---C................................................................................................................................................................................28200.7515000000000015
............................................................................................................................................CA------G------CAGCAG---CAGC------AA---CAGCAGCAGC-----------.........................................................................................................25200.30600000000006
.................................................................................GCAGCAACAGCAGCAGCAGCAGCA........................................................................................................................................................................................................24200.10202000000000
...................................A---G---CAG---CAACAGCAGCAACA---ACAGCAG------C.................................................................................................................................................................................................................................27150.07100100000000
........................................................AGCAACA---ACAGCAG------CAGCAGCAACAGC.....................................................................................................................................................................................................................27170.06100100000000
.............................................................................................................................................................................................................................A--ACAGCAA---------------CAACAGCAG-------------------C-AGCA------GC------...........24190.05100010000000
.....GC----------------AGCAGCAGCAGCA---G---CAG---CAAC............................................................................................................................................................................................................................................................23200.05101000000000
................................................................................................................................................................G---CAGC------AA---CAGCAGCAGC-----------AGCA---GCA...............................................................................................24200.05100000010000
........................................................................G------CAGCAGCAACAGCAGCAG................................................................................................................................................................................................................19200.05101000000000
..........................................................................................................................................AGCA------G------CAGCAG---CAGC------AA---CAGCAGCA......................................................................................................................25200.05101000000000
..................................................AACAGCAGCAACA---ACAGCAG------CAGC..............................................................................................................................................................................................................................24200.05101000000000
........................................................................................................................................................................................GCAGC-----------AGCA---GCAGCAGCAGCAAC....................................................................................23200.05101000000000
................................................................................................................................................................G---CAGC------AA---CAGCAGCAGC-----------AGCA---GC................................................................................................23200.05101000000000
..........................AGCAGCAGCA---G---CAG---CAACAGCAGCA.....................................................................................................................................................................................................................................................25200.05101000000000
..................................................................................................................................GCA---GCAGCA------G------CAGCAG---CAGC------AA---CAGC..........................................................................................................................26200.05101000000000
..................................................................ACAGCAG------CAGCAGCAACAGCAGCA.................................................................................................................................................................................................................24200.05101000000000
.....GC----------------AGCAGCAGCAGCA---G---CAG---CAACAGC.........................................................................................................................................................................................................................................................26200.05101000000000
..................................................................................................................................GCA---GCAGCA------G------CAGCAG---CAGC------AA---C.............................................................................................................................23200.05101000000000
droEre2
CAGCAAC----------------ACAACCAGCAGCA---G---CAT---CAGCAGCAGCA------GCAGCAG------CA---TCAACAGCAGCAGCAGCAGCAAC----------AGCAGCAA---CAGCA---GCAACA------G------CAGCAG---CAGCAACAACAG---CAACAG-----------------CAGCAGCAGCAACAG-----CAGCAGCAT------------CAACAGCAAC-----------------------AGCA------GC------AACAGCA--ACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..GCAAC----------------ACAACCAGCAGCA---G---CAT---CAGCA...........................................................................................................................................................................................................................................................2711.0011000000
...............................................................................................................................................................................................................................AGCAGCAT------------CAACAGCAAC-----------------------A............................1930.3310000100
.....................................................................GCAG------CA---TCAACAGCAGCAGCAGCAGC.........................................................................................................................................................................................................2640.2510100000
..................................................................................................................................GCA---GCAACA------G------CAGCAG---CAGC.........................................................................................................................................20200.1531000020
..............................GCAGCA---G---CAT---CAGCAGCAGC......................................................................................................................................................................................................................................................20200.1022000000
...........................................................................................................................AA---CAGCA---GCAACA------G------CAGCA.................................................................................................................................................19200.1020002000
..........................ACCAGCAGCA---G---CAT---CAGC............................................................................................................................................................................................................................................................18100.1010000010
.......................................................................................................................CAGCAA---CAGCA---GCAACA------G------CAGCA.................................................................................................................................................23200.1021000100
................................................................................................................................................................G---CAGCAACAACAG---CAACAG-----------------CAGCA..................................................................................................24120.0810000010
.....................................................AGCAGCA------GCAGCAG------CA---TCAACA.......................................................................................................................................................................................................................22120.0811000000
...............................................................................CA---TCAACAGCAGCAGCAGCAGC.........................................................................................................................................................................................................22160.0610001000
.....................................................................................................................................................................AGCAACAACAG---CAACAG-----------------CAGCA..................................................................................................22160.0610000010
...............................CAGCA---G---CAT---CAGCAGCAGCA------GC.............................................................................................................................................................................................................................................22200.0510000010
......................................................................................................................................................................GCAACAACAG---CAACAG-----------------CAGC...................................................................................................20200.0510100000
...................................................................................................GCAGCAAC----------AGCAGCAA---CAGCA---GCA......................................................................................................................................................................24200.0510000100
........................................................................................................................AGCAA---CAGCA---GCAACA------G------CAGCAG---CAGC.........................................................................................................................................27200.0511000000
........................................................................................................................AGCAA---CAGCA---GCAACA------G------CA....................................................................................................................................................19200.0510000100
.......................................................................................................................................................................................................................................................AGCAAC-----------------------AGCA------GC------AACAGCA--..19200.0510000100
.........................................................................................................................................................................ACAACAG---CAACAG-----------------CAGCAGC................................................................................................20200.0511000000
.....................................................................................................................................................................................ACAG-----------------CAGCAGCAGCAACAG-----C..................................................................................20200.0511000000
...................................................................................................................................................................................CAACAG-----------------CAGCAGCAGCAACAG-----CA.................................................................................23200.0510000010
....................................................................................................................................................................................AACAG-----------------CAGCAGCAGCAACAG-----CAGCA..............................................................................25200.0510001000
................................................................................A---TCAACAGCAGCAGCAGCA...........................................................................................................................................................................................................19200.0510000010
.............................................................................................GCAGCAGCAGCAAC----------AGCA........................................................................................................................................................................................18200.0511000000
.....................................................................................................................AGCAGCAA---CAGCA---GCAACA------G------CAGCAG---.............................................................................................................................................26200.0511000000
............................................................................................................................................................................................................GCAGCAGCAACAG-----CAGCAGCA...........................................................................21200.0510001000
.......................................................................................................................................................................CAACAACAG---CAACAG-----------------CAGCAG.................................................................................................21200.0510001000
....................................................................................................................................A---GCAACA------G------CAGCAG---CAGCA........................................................................................................................................19200.0510001000
...............................................................................CA---TCAACAGCAGCAGCAGCA...........................................................................................................................................................................................................20200.0510000010
...............................................................................................AGCAGCAGCAAC----------AGCAGCA.....................................................................................................................................................................................19200.0510001000
............................................................................................................................................................................................................GCAGCAGCAACAG-----CAGCAGC............................................................................20200.0511000000
....................................................................................................................................................................................AACAG-----------------CAGCAGCAGCAACAG-----CAGC...............................................................................24200.0510000010
.......................................................................................................................................................................CAACAACAG---CAACAG-----------------CAGCA..................................................................................................20200.0510100000
.........................................................................................AGCAGCAGCAGCAGCAAC----------AGCAGC......................................................................................................................................................................................24200.0510100000
.................................GCA---G---CAT---CAGCAGCAGCA------GCA............................................................................................................................................................................................................................................21200.0510000100
..................................................................................................................................GCA---GCAACA------G------CAGCAG---CAGCAA.......................................................................................................................................22200.0511000000
...........................................CAT---CAGCAGCAGCA------GCAGCAG------CA---.............................................................................................................................................................................................................................23200.0510001000
.......................................G---CAT---CAGCAGCAGCA------GCAGCA.........................................................................................................................................................................................................................................21200.0510000010
........................................................................................................................................GCAACA------G------CAGCAG---CAGCAACA.....................................................................................................................................21200.0510000010
.............................................................................................................................................................................CAG---CAACAG-----------------CAGCAGCAGC.............................................................................................19200.0510100000
.......................................................................................................................................................................CAACAACAG---CAACAG-----------------CAGC...................................................................................................19200.0511000000
............................................................................................................................A---CAGCA---GCAACA------G------CAGCA.................................................................................................................................................18200.0510000100
....................................................................................................CAGCAAC----------AGCAGCAA---CAGCA---GCA......................................................................................................................................................................23200.0511000000
......................................................................................................................................................................................CAG-----------------CAGCAGCAGCAACAG-----C..................................................................................19200.0510000010
...................................................................................................................................CA---GCAACA------G------CAGCAG---CAGCAAC......................................................................................................................................22200.0510100000
..........................................................................................................................................................................CAACAG---CAACAG-----------------CAGCAGCAGCA............................................................................................23200.0510001000
..............................GCAGCA---G---CAT---CAGCAGCAGCA------GC.............................................................................................................................................................................................................................................23200.0510100000

Generated: 05/18/2015 at 12:44 AM