ID:

dps_1397

 Coordinate:

4_group1:3638890-3639040 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.0 -18.0 -17.8 -17.8

Flybase annnotation

CDS [Dpse\GA19382-cds]; exon [dpse_GLEANR_17007:3]; intron [Dpse\GA19382-in]

No Repeatable elements found

mature
  1. dps_1397  4_group1:3638930-3638954 +
  2. Unknown_singleton_2546:936-960 -
star
  1. dps_1397  4_group1:3639017-3639038 +
  2. Unknown_singleton_2546:851-872 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCTTAGTCTCCAGCTTGTATGCCGCAACTATTATGATGCTAAGGCAAAGGTACGTAACTTTGCACTAACAAAAATGAATTTAATTAATATACTTGCCATGTAAATATATATTTATACCATTTTTATATGGATTTTCATATTGTTACAGCAGCAGTATTATTGCTCTAATATGTAAATGTGAACCAAAAATCTTAATCTAAACGCCTCTTAATCTTAATCTTATGTGTACCTAGTTGAAATCTGCATGAAT
******************************************************************************************.......................................((((((((((((..(((((..((((((...))))))......))))))))))))...........)))))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 SRR902011
testis
..........................................................................................TACTTGCCATGTAAATATATATTTA........................................................................................................................................ 25 0 2 96.50 193 172 20 1 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCT.................................................... 22 0 2 20.00 40 25 7 8 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAATCT.......................................................... 24 0 2 20.00 40 12 23 4 1 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAATC........................................................... 23 0 2 16.00 32 20 12 0 0 0
..........................................................................................TACTTGCCATGTAAATATATATT.......................................................................................................................................... 23 0 2 13.00 26 20 4 2 0 0
...........................................................................................ACTTGCCATGTAAATATATATTTA........................................................................................................................................ 24 0 2 9.50 19 19 0 0 0 0
...........................................................................................................................................................................TGTAAATGTGAACCAAAAATCTTAATCT.................................................... 28 0 2 4.50 9 3 1 4 1 0
...........................................................................TGAATTTAATTAATATACTTGCCATG...................................................................................................................................................... 26 0 2 4.50 9 1 6 1 1 0
...............................TTATGATGCTAAGGCGAAGGTACGTA.................................................................................................................................................................................................. 26 1 2 4.50 9 8 0 0 1 0
............................................................................................................................TATATGGATTTTCATATTGTTACAGCAG................................................................................................... 28 0 2 4.50 9 6 0 3 0 0
..........................................................................................TACTTGCCATGTAAATATATATTT......................................................................................................................................... 24 0 2 4.50 9 9 0 0 0 0
.............................................................................................................................................................................TAAATGTGAACCAAAAATCTTAATCT.................................................... 26 0 2 4.00 8 4 0 4 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGCA.................................................................................................... 25 0 2 3.50 7 5 1 0 0 1
...................................................................................................................TACCATTTTTATATGGATTTTCATAT.............................................................................................................. 26 0 2 3.50 7 2 5 0 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGCAGC.................................................................................................. 27 0 2 3.00 6 2 2 2 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTAAACG............................................... 27 0 1 3.00 3 3 0 0 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAAT............................................................ 22 0 2 3.00 6 4 2 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATC..................................................... 21 0 2 3.00 6 5 1 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTAAACGCC............................................. 29 0 1 3.00 3 2 0 1 0 0
......................................................................................................................................................................TAATATGTAAATGTGAACCAAAAATC........................................................... 26 0 2 3.00 6 4 1 1 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGCAG................................................................................................... 26 0 2 2.50 5 4 1 0 0 0
...........................................................................................................................................................................TGTAAATGTGAACCAAAAATCTTAA....................................................... 25 0 2 2.50 5 0 5 0 0 0
................................................................................................................................TGGATTTTCATATTGTTACAGCAGCAG................................................................................................ 27 0 2 2.50 5 3 2 0 0 0
...........................................................................................................................TTATATGGATTTTCATATTGTTACAGC..................................................................................................... 27 0 2 2.50 5 3 2 0 0 0
............................................................................................................................TATATGGATTTTCATATTGTTACAGCA.................................................................................................... 27 0 2 2.00 4 0 4 0 0 0
.............................................................................................................................................................................TAAATGTGAACCAAAAATCTTAATC..................................................... 25 0 2 2.00 4 0 4 0 0 0
......................................................................................................................................................................TAATATGTAAATGTGAACCAAAAATCT.......................................................... 27 0 2 2.00 4 2 1 1 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAATCTA......................................................... 25 1 2 2.00 4 2 2 0 0 0
.............................................................................................TTGCCATGTAAATATATATTTA........................................................................................................................................ 22 0 2 1.50 3 3 0 0 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGC..................................................................................................... 24 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................TTATATGGATTTTCATATTGTTACAGCA.................................................................................................... 28 0 2 1.50 3 3 0 0 0 0
..............................................................................................................................................................TATTGCTCTAATATGTAAATGTGAACC.................................................................. 27 0 2 1.50 3 3 0 0 0 0
...............................TTATGATGCTAAGGCGAAGGTACGAA.................................................................................................................................................................................................. 26 2 2 1.50 3 3 0 0 0 0
......................................................................................................................................................................TAATATGTAAATGTGAACCAAAAA............................................................. 24 0 2 1.50 3 3 0 0 0 0
.....................................................................................................................................TTTCATATTGTTACAGCAGCAGTAT............................................................................................. 25 0 2 1.50 3 3 0 0 0 0
...................................................................................................................TACCATTTTTATATGGATTTTCATA............................................................................................................... 25 0 2 1.50 3 0 3 0 0 0
.............................................................................................................................................................TTATTGCTCTAATATGTAAATGTGAAC................................................................... 27 0 2 1.50 3 1 1 0 1 0
.................................................................................................................................................................................TTTGAACCAAAAATCTTAATCT.................................................... 22 1 2 1.50 3 0 0 3 0 0
......................................................................................................................................TTCATATTGTTACAGCAGCAGTATT............................................................................................ 25 0 2 1.50 3 3 0 0 0 0
...............................TTATGATGCTAAGGCGAAGGTACGAAA................................................................................................................................................................................................. 27 2 2 1.50 3 3 0 0 0 0
...........................................................................................................................TTATATGGATTTTCATATTGTTACA....................................................................................................... 25 0 2 1.50 3 0 3 0 0 0
...........................................................................................................................TTATATGGATTTTCATATTGTTACAG...................................................................................................... 26 0 2 1.00 2 1 1 0 0 0
.........................................................................................................................................................................TGTGTAAATGTGAACCAAAAATCT.......................................................... 24 1 2 1.00 2 0 1 1 0 0
............................................................................................................................TATATGGATTTTCATATTGTTACAGC..................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
...............................TTATGATGCTAAGGCGAAGGTACAAA.................................................................................................................................................................................................. 26 3 2 1.00 2 2 0 0 0 0
...TTAGTCTCCAGCTTGTATCCCGCAAC.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................TATTGCTCTAATATGTAAATGTGAAC................................................................... 26 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................TAATATGTAAATGTGAACCAAAAAT............................................................ 25 0 2 1.00 2 2 0 0 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGCAGA.................................................................................................. 27 1 2 1.00 2 0 2 0 0 0
.......................................................................................................................................TCATATTGTTACAGCAGCAGTATT............................................................................................ 24 0 2 1.00 2 2 0 0 0 0
....TAGTCTCCAGCTTGTATCCCGCAACTA............................................................................................................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................CTCTAATATGTAAATGTGAACCAAAAA............................................................. 27 0 2 1.00 2 1 1 0 0 0
GTCTTAGTCTCCAGCTTG......................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0
.........................................................................AATGAATTTAATTAATATACTTGCCA........................................................................................................................................................ 26 0 2 1.00 2 0 2 0 0 0
............................................................................................................................TATATGGATTTTCATATTGTTACA....................................................................................................... 24 0 2 1.00 2 0 2 0 0 0
......................................................................................................................................TTCATATTGTTACAGCAGCAG................................................................................................ 21 0 2 1.00 2 2 0 0 0 0
................TGTATGCCGCAACTATTATGATGC................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAATCTTAA....................................................... 27 0 2 1.00 2 2 0 0 0 0
................................................................................................................................................................TTGCTCTAATATGTAAATGTGAACC.................................................................. 25 0 2 1.00 2 0 1 1 0 0
...........................................................................................................................................................................TGTAAATGTGAACCAAAAATCTTAATC..................................................... 27 0 2 1.00 2 1 0 1 0 0
.................................................................................................................................................................TTCTCTAATATGTAAATGTGAACCAA................................................................ 26 1 2 1.00 2 0 2 0 0 0
............................................................................................CTTGCCATGTAAATATATATTTA........................................................................................................................................ 23 0 2 1.00 2 2 0 0 0 0
.TCTTAGTCTCCAGCTTGTATCCCGCAAC.............................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCAA................................................... 23 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................TGCTCTAATATGTAAATGTGAACC.................................................................. 24 0 2 1.00 2 0 2 0 0 0
.......................................................................................................................................................................................................................TAATCTTATGTGTACCTAGTTGAAATC......... 27 0 1 1.00 1 0 0 1 0 0
....TAGTCTCCAGCTTGTATCCCGCAAC.............................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAAT...................................................... 20 0 2 1.00 2 2 0 0 0 0
.TCTTAGTCTCCAGCTTGTATGCCGC................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.........TCCAGCTTGTATCCCGCAACTATTA......................................................................................................................................................................................................................... 25 1 2 1.00 2 2 0 0 0 0
........................................................................................................................................................................................................AACGCCTCTCAATCTTAATCTTATGTG........................ 27 1 1 1.00 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAATATATATTTTTAAA.................................................................................................................................... 29 3 2 1.00 2 0 2 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTAAACGC.............................................. 28 0 1 1.00 1 0 1 0 0 0
...............................TTATGATGCTAAGGCAAAGGTAC..................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAATATATATTAAT....................................................................................................................................... 26 1 2 1.00 2 0 2 0 0 0
...............................................................................................................................ATGGATTTTCATATTGTTACAGCAGC.................................................................................................. 26 0 2 0.50 1 0 0 1 0 0
...............................................................................................................................................................................AATGTGAACCAAAAATCTTAATCT.................................................... 24 0 2 0.50 1 0 1 0 0 0
.................................................................................................................TATACCATTTTTATATGGATTTTCATA............................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................TTATTGCTCTAATATGTAAATGTGA..................................................................... 25 0 2 0.50 1 0 1 0 0 0
..........................................................................................TACTTGCCATGTAAATATATATTTAA....................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................ATGTAAATGTGAACCAAAAATC........................................................... 22 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................TTATTGCTCTAATATGTAAATGTGAACC.................................................................. 28 0 2 0.50 1 1 0 0 0 0
........................................................................................GTTACTTGCCATGTAAATATATATTTA........................................................................................................................................ 27 2 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................ATGTAAATGTGAACCAAAAATCT.......................................................... 23 0 2 0.50 1 1 0 0 0 0
...............................TTATGATGCTAAGGCGAAGGCACGAAA................................................................................................................................................................................................. 27 3 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................TCTTAATCTTATGTGTACCTA.................. 21 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TATATAAATGTGAACCAAAAATCTTAA....................................................... 27 1 2 0.50 1 0 1 0 0 0
..........................................................................................TACTTGCCATGTAAATATATATTTAAA...................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................AATATGTAAATGTGAACCAAAAATC........................................................... 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................TAATATACTTGCCATGTAAATATATAT........................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCAAAAA............................................................. 29 0 2 0.50 1 1 0 0 0 0
...............................TTATGATGCTAAGGCGAAGGTACGTAAA................................................................................................................................................................................................ 28 2 2 0.50 1 1 0 0 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGCAGCA................................................................................................. 28 0 2 0.50 1 0 0 1 0 0
..............................................................................................................................................................................AAATGTGAACCAAAAATCTTA........................................................ 21 0 2 0.50 1 0 1 0 0 0
....................................................................................TTAATATACTTGCCATGTAAATAT............................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
............................................................................................................................TATATGGATCTTCATATTGTTACAG...................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................ATGTGAACCAAAAATCTTAATCT.................................................... 23 0 2 0.50 1 1 0 0 0 0
...........................................................................................................TATATTTATACCATTTTTATATGGATT..................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................ATGGATTTTCATATTGTTACAGCAGCAG................................................................................................ 28 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................ATGTGAACCAAAAATCTTAATC..................................................... 22 0 2 0.50 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAATATATA............................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................AAATGTGAACCAAAAATCTTAATCT.................................................... 25 0 2 0.50 1 0 0 1 0 0
............................................................................................................................TATATGGATTTTCATATTGTTACAGCAA................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
................................................................................................................................TGGATTTTCATATTGTTACAGCAGC.................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCA................................................................. 25 0 2 0.50 1 1 0 0 0 0
...............................TTATGATGCTAAGGCTAAGGTACG.................................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................TGATTGCTCTAATATGTAAATGTGAACCA................................................................. 29 1 2 0.50 1 0 0 1 0 0
...............................................................................................................................ATGGATTTTCATATTGTTACAGCAG................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...................................................................................................................TACCATTTTTATATGGATTTTCATATAA............................................................................................................ 28 2 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAATATCAA....................................................... 27 2 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................................................CTTAATCTTATGTGTACC.................... 18 0 2 0.50 1 0 0 1 0 0
..........................................................................................TACTTGCCATGTAAATATATATTTAT....................................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0
.............................................................................................................................................TGTTACAGCAGCAGTATTTT.......................................................................................... 20 1 2 0.50 1 1 0 0 0 0
.......TCTCCAGCTTGTATCCCGCAACTATT.......................................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAATATATAAA.......................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0
....................................................................................................................................TTTTCATATTGTTACAGCAGC.................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAATATATT............................................................................................................................................ 21 1 2 0.50 1 1 0 0 0 0
................................................................................................................................TGGATTTTCATATTGTTACAGCAG................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................TTTTCATATTGTTACAGCAGCAGTAT............................................................................................. 26 0 2 0.50 1 1 0 0 0 0
.............................................................................................................TATTTATACCATTTTTATATGGATTT.................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................................................................AATATGTAAATGTGAACCAAAAATCT.......................................................... 26 0 2 0.50 1 1 0 0 0 0
...............................TTATGATGCTAAGGCGAAGGTACAAAA................................................................................................................................................................................................. 27 3 2 0.50 1 1 0 0 0 0
...................................................................................................................TACCATTTTTATATGGATTTTCATATA............................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
................................................................................................................................TGGATTTTCATATTGTTACAGCAGCA................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCAAA............................................................... 27 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAA............................................................. 21 0 2 0.50 1 0 0 1 0 0
...........................................................................................ACTTGCCATGTAAATATATATTTATAC..................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..........................................................................................TACTTTCCATGTAAATATATATTTA........................................................................................................................................ 25 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................ATTGCTCTAATATGTAAATGTGAACA.................................................................. 26 1 2 0.50 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAAAATATATTTA........................................................................................................................................ 25 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................TATGGATTTTCATATTGTTACAGCAGCAG................................................................................................ 29 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTGAACGC.............................................. 28 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................ATATGGATTTTCATATTGTTACAGCAG................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..........................................................................................TACTTGCCATGTAAATATATATTTATA...................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................TCTAATATGTAAATGTGAACCAAAAATCC.......................................................... 29 1 2 0.50 1 0 0 1 0 0
........................................................................................ATTACTTGCCATGTAAATATATATTTA........................................................................................................................................ 27 2 2 0.50 1 1 0 0 0 0
.........................................................................................................TATATATTTATACCATTTTTATATG......................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................TTGCTCTAATATGTAAATGTGAACCAA................................................................ 27 0 2 0.50 1 1 0 0 0 0
............................................................................................................................TATATGGATTTTCATATTGTTACAGCAGA.................................................................................................. 29 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................TATTGCTCTAATATGTAAATGTGA..................................................................... 24 0 2 0.50 1 0 0 0 1 0
...........................................................................................ACTTGCCATGTAAATATATATT.......................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................TTGCTCTAATATGTAAATGTGAAA................................................................... 24 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TATGTAAATGTGAACC.................................................................. 16 0 2 0.50 1 0 1 0 0 0
.............................................................................................TTGCCATGTAAATATATATTTATACC.................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................TTTAAATGTGAACCAAAAATCTTAATCT.................................................... 28 1 2 0.50 1 0 0 1 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCAAAAATCTT......................................................... 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTGAACGAC............................................. 29 2 2 0.50 1 0 0 1 0 0
..................................................................................................................................................................................GTGAACCAAAAATCTTAATCT.................................................... 21 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................TTTAAATGTGAACCAAAAATCT.......................................................... 22 1 2 0.50 1 0 0 1 0 0
..................................................................................................................................GATTTTCATATTGTTACAGCAGCAG................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
...........................................................................................ACTTGCCATGTAAATATATATTT......................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCAA................................................................ 26 0 2 0.50 1 1 0 0 0 0
............................................................................................................................TATATGGATTTTCATATTGTTACAGCAGC.................................................................................................. 29 0 2 0.50 1 0 0 1 0 0
..............................................................................................TGCCATGTAAATATATATTTATACCA................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................TTTTCATATTGTTACAGCAGCAGTAA............................................................................................. 26 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................ATTGCTCTAATATGTAAATGTGAACC.................................................................. 26 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................AGGTGAACCAAAAATCTTAATCT.................................................... 23 1 2 0.50 1 0 0 1 0 0
................................................................................................................................................................................................TTAATCTTAACGCCTCTTAATCTTAAAA............................... 28 3 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................TGCTCTAATATGTAAATGTGAACA.................................................................. 24 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TATGTAAATGTGAACCGAAAATCTA......................................................... 25 2 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................TGTGAACCAAAAATCTTAATCC.................................................... 22 1 2 0.50 1 0 0 1 0 0
.......TCTCCAGCTTGTATCCCGCAACTATTA......................................................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
.....................................TGCTAAGGCGAAGGTACAAAA................................................................................................................................................................................................. 21 3 5 0.20 1 1 0 0 0 0
...................................................................................ATTAATATCCTGGCCTTGTA.................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0

Anti-sense strand reads

CAGAATCAGAGGTCGAACATACGGCGTTGATAATACTACGATTCCGTTTCCATGCATTGAAACGTGATTGTTTTTACTTAAATTAATTATATGAACGGTACATTTATATATAAATATGGTAAAAATATACCTAAAAGTATAACAATGTCGTCGTCATAATAACGAGATTATACATTTACACTTGGTTTTTAGAATTAGATTTGCGGAGAATTAGAATTAGAATACACATGGATCAACTTTAGACGTACTTA
****************************************************.......................................((((((((((((..(((((..((((((...))))))......))))))))))))...........)))))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 GSM343916
embryo
 M059
embryo
...............................................................................................................................TACCTAAAAGTATAACAATGTCGT.................................................................................................... 24 0 2 9.00 18 13 5 0 0 0
..............................................................................................................................ATACCTAAAAGTATAACAATGTCGT.................................................................................................... 25 0 2 6.00 12 6 6 0 0 0
.................................................................................................................................CCTAAAAGTATAACAATGTCGT.................................................................................................... 22 0 2 6.00 12 8 3 0 1 0
................................................................................................................................ACCTAAAAGTATAACAATGTCGT.................................................................................................... 23 0 2 6.00 12 6 6 0 0 0
....................................................................................................................................................................AGATTATACATTTACACTTGGTT................................................................ 23 0 2 5.50 11 10 0 0 0 1
...................................................................................................................................................................GAGATTATACATTTACACTTGGTT................................................................ 24 0 2 4.00 8 6 2 0 0 0
..................................................................................................................................................................CGAGATTATACATTTACACTTGGTT................................................................ 25 0 2 2.50 5 4 0 0 1 0
.....................................................................................................................................................................GATTATACATTTACACTTGGTT................................................................ 22 0 2 2.00 4 3 1 0 0 0
..................................................................................................................................CTAAAAGTATAACAATGTCGT.................................................................................................... 21 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................CCTAAAAGTATAACAATGTCG..................................................................................................... 21 0 2 1.00 2 2 0 0 0 0
................................................TCCATGCAGGGAAACGTGAT....................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0
...............................................................................................................................TACCTAAAAGTATAACAATGTCG..................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
........................................................................................................................................................................................................TGGAGGAGAATTAGAATTA................................ 19 2 5 1.00 5 4 0 1 0 0
............................................................................CTTAAATTAATTATATGAACGGTA....................................................................................................................................................... 24 0 2 1.00 2 0 2 0 0 0
..............................................................................................................................ATACCTAAAAGTATAACAATGTCGTCGT................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................TACCTAAAAGTATAACAATGTC...................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
................................................................................................................................ACCTAAAAGTATAACAATGTCGTCGT................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
...........................................................................ACTTAAATTAATTATATGAACGGT........................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................ACGAGATTATACATTTACACTTGGTT................................................................ 26 0 2 0.50 1 1 0 0 0 0
.............................................................................TTAAATTAATTATATGAACGGTA....................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..............................................................................TAAATTAATTATATGAACGGTA....................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................CCTAAAAGTATAACGATGTCGT.................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................TTATAACAATGTCGTCGTCATA............................................................................................. 22 1 2 0.50 1 1 0 0 0 0
.................................................................................................GTACATTTATATATAAATATG..................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................ATACCTAAAAGTATAACAATGTCG..................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................AGTATAACAATGTCGTCGTCAT.............................................................................................. 22 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................GATTATACATTTACACTCGGTT................................................................ 22 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................AGAATACACATGGGTCAGTTT............ 21 3 3 0.33 1 1 0 0 0 0
........................................................................................................................................................................................................TAGTGGAGAATTAGAATT................................. 18 2 5 0.20 1 0 0 0 1 0
..............................................................................................................................................................ATAACGTGATTAGACATTT.......................................................................... 19 2 6 0.17 1 1 0 0 0 0
..............................................................................................................................................................ATAACGTGATTAGACATT........................................................................... 18 2 19 0.05 1 0 0 1 0 0
...................................................................................................................................................................................TCGTGGTTTTTAGAAGTAGA.................................................... 20 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group1:3638840-3639090 + dps_1397 GTCTTAGTCTCCAGCTTGTATGCCGCAACTATTATGATGCTAAGGCAAAGGTACGTAACTTTGCACTAACAAAAA--------------TGAATTTAATTAATATACTTGCCATGTAAATATATATTTATACCATTTT-----------------------TATATGGATTTTCATATTGTTACAGCAGCAGTATT-ATTGCTCTAATATGTAAATGTGAACCAAAAATCTTAATCTAAACGCCTCTTAATCTTAATCTTATGTGTACCTAGTTGAAATCTGCATGAAT
droPer2 scaffold_1:873264-873515 + GTCTTAGTCTCCAGCTTGTATCCCGTAACTATTATGATGCTAAGGCGAAGGTACGTCACTTTGCACTAACAAAAA--------------TGAATTTAAATAATATACTTGCCATGTAACTATATATTTATACCATTTT-----------------------TATATGGATTTTCATATTGTTACAGCAGCAGTATTTATTGCTCTAATATGTAAATGTGAACCAAAAATCTTAATCTTAACGCCTCTCAATCTTAATCTTATGTGTACCTAGTTGAAATCTGCATGAAT
droWil2 scf2_1100000004521:4698685-4698819 - GTCTAAAGCTTGAATTGGTTGGCCGAAATCTTTTCGATCCGATGGCAAAGGTATATCAATTTCTT--------------TTTGTTTTTAAATATTCATTTGG--------CC--------------------CATTTTTTATGGACTTATACATACATTAATATATAGATTCCCATA----------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:939705-939757 + GACTTCAGCTTCAATTGGTATCACGTAATTTCTTTGATCCACAAGCAAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:27656344-27656396 + GTCTTCAGCTACAGCTGGTATCACGTAACTTTTTTGATCCCCAAGCAAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:2090033-2090085 + GACTCAAGCTTCAACTTGTCTCTCGAAATTTGTTTGATCCAAAAGCAAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:14862016-14862073 - GTTTAAACTTGCAGCTGGTGGCGCGTAACTTCTTTGATCCGCAGGCCAAGGTACGGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396572:2138518-2138604 + GTTTAAACTTGCAGTTGGTGGCTCGTAATTTCTTTGATCCCCAAGCAAAGGTACGAAG----AAACAATCAAATTT--------------AAGTTTAAATTATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302472:2321140-2321215 - GTCTTAAACTGGAATTGGTTGGGCGAAATCTCTTTGATCCCCATGCAAAGGTAAGCGAA-A-----TAAGAAACTTGTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454111:461441-461522 - GCTTGAACTTGCAACTGGTATCGCGCAATTATTTCGATCCACAAGCAAAGGTTTGCCAC-T--------AAAAATAACACTTATA------------AATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490644:537992-538067 + GCTTAGACTTGCAGCTGGTGTCGCGCAATTTTTTCGATCCTAAAGCAAAGGTTTGCTAA-C--------TAAATTTGCATTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780261:3729-3780 - GGTTAAACTTGCAGCTGGTTTCGCGCAATTTTTTCGATCCTAAAGCAAAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302422:2152129-2152179 - GCTTGAACTTGCAGCTGGTTTCCCGCAACTTCT-TGATCCCAAAGCAAAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414023:4870-4931 + GCTTGAACTTGCAGTTGGTGTCTCGCAACTTTTTCGATCCTCAAGCAAAGGTTTGCTAG-T--------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000407253:433934-434027 - GCTTAGAGCTGCAGTTGGTTCACCGCAATTTGTTCGATCCCAAAGCAAAGGTTTGAAAT-C--------------TACATTCTTAAGCAACAACCTATATTATATATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:11000145-11000214 - GCTTAGACTTGAAGCTGGTCTCGCGCTACTACTACGATCCTCAAGCTAAGGTTTGCCCT-C--------------TGTACTCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:10657442-10657511 - GCTTAGACTTGAAGCTGGTCTCGCGCAACTACTTCGATCCTAAAGCTCAGGTTTGCCCT-C--------------TGCACTCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_3:6401427-6401496 - GCTTAGACTTGAAGCTGGTCTCGCGCAACTACTTCGATCCTAGAGCTCAGGTTTGCCCT-C--------------TGCACTCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:7379349-7379399 - ATTTTTAAATT------ATCTTT--------------------------------------------------------------------------------------------------------------------------------------------TATGAATGTTCAAATTGTTACATCAGCTGTTTT-A-------------------------------------------------------------------------------------------
droEre2 scaffold_4929:14446399-14446491 + GCTTAAACTTGCAGTTGGTCTCGCGCAATTTCTTTGATCCTCAAGCTAAGGTTCGCCCT-C--------------TGAACTCGCATTTAAAAGACTATCTGATCAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTCTTAGTCTCCAGCTTGTATGCCGCAACTATTATGATGCTAAGGCAAAGGTACGTAACTTTGCACTAACAAAAA--------------TGAATTTAATTAATATACTTGCCATGTAAATATATATTTATACCATTTT-----------------------TATATGGATTTTCATATTGTTACAGCAGCAGTATT-ATTGCTCTAATATGTAAATGTGAACCAAAAATCTTAATCTAAACGCCTCTTAATCTTAATCTTATGTGTACCTAGTTGAAATCTGCATGAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................TACTTGCCATGTAAATATATATTTA................................................................................................................................................................25296.501930172100002000
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAATCT....................................................22220.004002580000700
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAATCT..........................................................24220.0040012401002300
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAATC...........................................................23216.0032020000001200
........................................................................................................TACTTGCCATGTAAATATATATT..................................................................................................................................................................23213.002602020000400
.........................................................................................................ACTTGCCATGTAAATATATATTTA................................................................................................................................................................2429.501901900000000
.................................................................................................................................................................................................................TGTAAATGTGAACCAAAAATCTTAATCT....................................................2824.5090340100100
.........................................................................................TGAATTTAATTAATATACTTGCCATG..............................................................................................................................................................................2624.5090110100600
.................................................................................................................................................................TATATGGATTTTCATATTGTTACAGCAG....................................................................................................2824.5090630000000
........................................................................................................TACTTGCCATGTAAATATATATTT.................................................................................................................................................................2424.5090900000000
...................................................................................................................................................................................................................TAAATGTGAACCAAAAATCTTAATCT....................................................2624.0080440000000
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGCA.....................................................................................................2523.5070500000110
.................................................................................................................................TACCATTTT-----------------------TATATGGATTTTCATAT...............................................................................................................2623.5070200000500
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGCAGC...................................................................................................2723.0060220000200
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTAAACG...............................................2713.0030300000000
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAAT............................................................2223.0060400000200
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAATC.....................................................2123.0060500000100
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTAAACGCC.............................................2913.0030210000000
............................................................................................................................................................................................................TAATATGTAAATGTGAACCAAAAATC...........................................................2623.0060410000100
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGCAG....................................................................................................2622.5050400000100
.................................................................................................................................................................................................................TGTAAATGTGAACCAAAAATCTTAA.......................................................2522.5050000000500
.....................................................................................................................................................................TGGATTTTCATATTGTTACAGCAGCAG.................................................................................................2722.5050300000200
.........................................................................................................................................T-----------------------TATATGGATTTTCATATTGTTACAGC......................................................................................................2722.5050300000200
.................................................................................................................................................................TATATGGATTTTCATATTGTTACAGCA.....................................................................................................2722.0040000000400
...................................................................................................................................................................................................................TAAATGTGAACCAAAAATCTTAATC.....................................................2522.0040000000400
............................................................................................................................................................................................................TAATATGTAAATGTGAACCAAAAATCT..........................................................2722.0040210000100
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAATCTA.........................................................2522.0040200000200
...........................................................................................................TTGCCATGTAAATATATATTTA................................................................................................................................................................2221.5030300000000
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGC......................................................................................................2421.5030300000000
.........................................................................................................................................T-----------------------TATATGGATTTTCATATTGTTACAGCA.....................................................................................................2821.5030300000000
...................................................................................................................................................................................................T-ATTGCTCTAATATGTAAATGTGAACC..................................................................2721.5030300000000
............................................................................................................................................................................................................TAATATGTAAATGTGAACCAAAAA.............................................................2421.5030300000000
..........................................................................................................................................................................TTTCATATTGTTACAGCAGCAGTAT..............................................................................................2521.5030300000000
.................................................................................................................................TACCATTTT-----------------------TATATGGATTTTCATA................................................................................................................2521.5030000000300
..................................................................................................................................................................................................TT-ATTGCTCTAATATGTAAATGTGAAC...................................................................2721.5030100100100
...........................................................................................................................................................................TTCATATTGTTACAGCAGCAGTATT-............................................................................................2521.5030300000000
.........................................................................................................................................T-----------------------TATATGGATTTTCATATTGTTACA........................................................................................................2521.5030000000300
.........................................................................................................................................T-----------------------TATATGGATTTTCATATTGTTACAG.......................................................................................................2621.0020100000100
.................................................................................................................................................................TATATGGATTTTCATATTGTTACAGC......................................................................................................2621.0020200000000
...................................................................................................................................................................................................T-ATTGCTCTAATATGTAAATGTGAAC...................................................................2621.0020200000000
............................................................................................................................................................................................................TAATATGTAAATGTGAACCAAAAAT............................................................2521.0020200000000
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGCAGA...................................................................................................2721.0020000000200
............................................................................................................................................................................TCATATTGTTACAGCAGCAGTATT-............................................................................................2421.0020200000000
.........................................................................................................................................................................................................CTCTAATATGTAAATGTGAACCAAAAA.............................................................2721.0020100000100
GTCTTAGTCTCCAGCTTG...............................................................................................................................................................................................................................................................................1811.0010000100000
.........................................................................AA--------------TGAATTTAATTAATATACTTGCCA................................................................................................................................................................................2621.0020000000200
.................................................................................................................................................................TATATGGATTTTCATATTGTTACA........................................................................................................2421.0020000000200
...........................................................................................................................................................................TTCATATTGTTACAGCAGCAG.................................................................................................2121.0020200000000
................TGTATGCCGCAACTATTATGATGC.........................................................................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAATCTTAA.......................................................2721.0020200000000
......................................................................................................................................................................................................TTGCTCTAATATGTAAATGTGAACC..................................................................2521.0020010000100
.................................................................................................................................................................................................................TGTAAATGTGAACCAAAAATCTTAATC.....................................................2721.0020110000000
..........................................................................................................CTTGCCATGTAAATATATATTTA................................................................................................................................................................2321.0020200000000
.......................................................................................................................................................................................................TGCTCTAATATGTAAATGTGAACC..................................................................2421.0020000000200
.............................................................................................................................................................................................................................................................TAATCTTATGTGTACCTAGTTGAAATC.........2711.0010010000000
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAAT......................................................2021.0020200000000
.TCTTAGTCTCCAGCTTGTATGCCGC.......................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAATCTAAACGC..............................................2811.0010000000100
...............................TTATGATGCTAAGGCAAAGGTAC...........................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................ATGGATTTTCATATTGTTACAGCAGC...................................................................................................2620.5010010000000
.....................................................................................................................................................................................................................AATGTGAACCAAAAATCTTAATCT....................................................2420.5010000000100
...............................................................................................................................TATACCATTTT-----------------------TATATGGATTTTCATA................................................................................................................2720.5010000000100
..................................................................................................................................................................................................TT-ATTGCTCTAATATGTAAATGTGA.....................................................................2520.5010000000100
........................................................................................................TACTTGCCATGTAAATATATATTTAA...............................................................................................................................................................2620.5010100000000
................................................................................................................................................................................................................ATGTAAATGTGAACCAAAAATC...........................................................2220.5010100000000
..................................................................................................................................................................................................TT-ATTGCTCTAATATGTAAATGTGAACC..................................................................2820.5010100000000
................................................................................................................................................................................................................ATGTAAATGTGAACCAAAAATCT..........................................................2320.5010100000000
..........................................................................................................................................................................................................................................................TCTTAATCTTATGTGTACCTA..................2120.5010100000000
.............................................................................................................................................................................................................AATATGTAAATGTGAACCAAAAATC...........................................................2520.5010100000000
...................................................................................................TAATATACTTGCCATGTAAATATATAT...................................................................................................................................................................2720.5010100000000
.......................................................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCAAAAA.............................................................2920.5010100000000
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGCAGCA..................................................................................................2820.5010010000000
....................................................................................................................................................................................................................AAATGTGAACCAAAAATCTTA........................................................2120.5010000000100
..................................................................................................TTAATATACTTGCCATGTAAATAT.......................................................................................................................................................................2420.5010100000000
......................................................................................................................................................................................................................ATGTGAACCAAAAATCTTAATCT....................................................2320.5010100000000
.........................................................................................................................TATATTTATACCATTTT-----------------------TATATGGATT......................................................................................................................2720.5010000000100
....................................................................................................................................................................ATGGATTTTCATATTGTTACAGCAGCAG.................................................................................................2820.5010100000000
......................................................................................................................................................................................................................ATGTGAACCAAAAATCTTAATC.....................................................2220.5010100000000
........................................................................................................TACTTGCCATGTAAATATATA....................................................................................................................................................................2120.5010100000000
....................................................................................................................................................................................................................AAATGTGAACCAAAAATCTTAATCT....................................................2520.5010010000000
.................................................................................................................................................................TATATGGATTTTCATATTGTTACAGCAA....................................................................................................2820.5010100000000
.....................................................................................................................................................................TGGATTTTCATATTGTTACAGCAGC...................................................................................................2520.5010100000000
.......................................................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCA.................................................................2520.5010100000000
....................................................................................................................................................................ATGGATTTTCATATTGTTACAGCAG....................................................................................................2520.5010100000000
.................................................................................................................................TACCATTTT-----------------------TATATGGATTTTCATATAA.............................................................................................................2820.5010100000000
...........................................................................................................................................................................................................................................................CTTAATCTTATGTGTACC....................1820.5010010000000
........................................................................................................TACTTGCCATGTAAATATATATTTAT...............................................................................................................................................................2620.5010010000000
........................................................................................................TACTTGCCATGTAAATATATAAA..................................................................................................................................................................2320.5010100000000
.........................................................................................................................................................................TTTTCATATTGTTACAGCAGC...................................................................................................2120.5010100000000
........................................................................................................TACTTGCCATGTAAATATATT....................................................................................................................................................................2120.5010100000000
.....................................................................................................................................................................TGGATTTTCATATTGTTACAGCAG....................................................................................................2420.5010100000000
.........................................................................................................................................................................TTTTCATATTGTTACAGCAGCAGTAT..............................................................................................2620.5010100000000
...........................................................................................................................TATTTATACCATTTT-----------------------TATATGGATTT.....................................................................................................................2620.5010000000100
.............................................................................................................................................................................................................AATATGTAAATGTGAACCAAAAATCT..........................................................2620.5010100000000
.................................................................................................................................TACCATTTT-----------------------TATATGGATTTTCATATA..............................................................................................................2720.5010100000000
.....................................................................................................................................................................TGGATTTTCATATTGTTACAGCAGCA..................................................................................................2620.5010100000000
.......................................................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCAAA...............................................................2720.5010100000000
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAA.............................................................2120.5010010000000
.........................................................................................................ACTTGCCATGTAAATATATATTTATAC.............................................................................................................................................................2720.5010100000000
.....................................................................................................................................................................................................ATTGCTCTAATATGTAAATGTGAACA..................................................................2620.5010100000000
...................................................................................................................................................................TATGGATTTTCATATTGTTACAGCAGCAG.................................................................................................2920.5010100000000
..................................................................................................................................................................ATATGGATTTTCATATTGTTACAGCAG....................................................................................................2720.5010100000000
........................................................................................................TACTTGCCATGTAAATATATATTTATA..............................................................................................................................................................2720.5010100000000
..........................................................................................................................................................................................................TCTAATATGTAAATGTGAACCAAAAATCC..........................................................2920.5010010000000
.......................................................................................................................TATATATTTATACCATTTT-----------------------TATATG..........................................................................................................................2520.5010100000000
......................................................................................................................................................................................................TTGCTCTAATATGTAAATGTGAACCAA................................................................2720.5010100000000
.................................................................................................................................................................TATATGGATTTTCATATTGTTACAGCAGA...................................................................................................2920.5010100000000
...................................................................................................................................................................................................T-ATTGCTCTAATATGTAAATGTGA.....................................................................2420.5010000100000
.........................................................................................................ACTTGCCATGTAAATATATATT..................................................................................................................................................................2220.5010100000000
......................................................................................................................................................................................................TTGCTCTAATATGTAAATGTGAAA...................................................................2420.5010100000000
...............................................................................................................................................................................................................TATGTAAATGTGAACC..................................................................1620.5010000000100
...........................................................................................................TTGCCATGTAAATATATATTTATACC............................................................................................................................................................2620.5010000000100
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAATCTT.........................................................2520.5010100000000
........................................................................................................................................................................................................................GTGAACCAAAAATCTTAATCT....................................................2120.5010100000000
.......................................................................................................................................................................GATTTTCATATTGTTACAGCAGCAG.................................................................................................2520.5010100000000
.........................................................................................................ACTTGCCATGTAAATATATATTT.................................................................................................................................................................2320.5010100000000
.......................................................................................................................................................................................................TGCTCTAATATGTAAATGTGAACCAA................................................................2620.5010100000000
.................................................................................................................................................................TATATGGATTTTCATATTGTTACAGCAGC...................................................................................................2920.5010010000000
............................................................................................................TGCCATGTAAATATATATTTATACCA...........................................................................................................................................................2620.5010100000000
.........................................................................................................................................................................TTTTCATATTGTTACAGCAGCAGTAA..............................................................................................2620.5010100000000
.....................................................................................................................................................................................................ATTGCTCTAATATGTAAATGTGAACC..................................................................2620.5010100000000
.......................................................................................................................................................................................................TGCTCTAATATGTAAATGTGAACA..................................................................2420.5010100000000
.......................................................................................................................................................................................................................TGTGAACCAAAAATCTTAATCC....................................................2220.5010010000000
droPer2
GTCTTAGTCTCCAGCTTGTATCCCGTAACTATTATGATGCTAAGGCGAAGGTACGTCACTTTGCACTAACAAAAA--------------TGAATTTAAATAATATACTTGCCATGTAACTATATATTTATACCATTTT-----------------------TATATGGATTTTCATATTGTTACAGCAGCAGTATTTATTGCTCTAATATGTAAATGTGAACCAAAAATCTTAATCTTAACGCCTCTCAATCTTAATCTTATGTGTACCTAGTTGAAATCTGCATGAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................TATTATGATGCTAAGGCGAAGGTAC...........................................................................................................................................................................................................................................2521.002002000
...............................................................................................................................................................................................................TATGTAAATGTGAACCAAAAATCT..........................................................2411.001100000
.............................TATTATGATGCTAAGGCGAAGGTACG..........................................................................................................................................................................................................................................2620.501001000
...............................TTATGATGCTAAGGCGAAGGTACGTC........................................................................................................................................................................................................................................2620.501001000
...............................TTATGATGCTAAGGCGAAGGTACG..........................................................................................................................................................................................................................................2420.501000001
.............................TATTATGATGCTAAGGCGAAGGT.............................................................................................................................................................................................................................................2320.501001000
droWil2
GTCTAAAGCTTGAATTGGTTGGCCGAAATCTTTTCGATCCGATGGCAAAGGTATATCAATTTCTT--------------TTTGTTTTTAAATATTCATTTGG--------CC--------------------CATTTTTTATGGACTTATACATACATTAATATATAGATTCCCATA----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...TAAAGCTTGAATTGGTTGGCCGAAATCT..................................................................................................................................................................................................................................................................2812.00202000
..........TGAATTGGTTGGCCGAAATCTTTT...............................................................................................................................................................................................................................................................2411.00101000
...............................................................................TTTGTTTTTAAATATTCATTTGG--------CC--------------------CAT..........................................................................................................................................................2811.00101000
...............TGGTTGGCCGAAATCTTTTCGATCCG........................................................................................................................................................................................................................................................2611.00101000
...................TGGCCGAAATCTTTTCGATCCGATGGCA..................................................................................................................................................................................................................................................2811.00101000
droVir3
GACTTCAGCTTCAATTGGTATCACGTAATTTCTTTGATCCACAAGCAAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................TTGATCCACAAGCAAAG...............................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000010001000000000000
.......GCTTCAATTGGTATCACGTA......................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..........................AATTTCTTTGATCCACAAGCAAA................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
GACTTCAGCTTCAATTGGTATCAC.........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
..................................TGATCCACAAGCAAAGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1911.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
GTCTTCAGCTACAGCTGGTATCACGTAACTTTTTTGATCCCCAAGCAAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GACTCAAGCTTCAACTTGTCTCTCGAAATTTGTTTGATCCAAAAGCAAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GTTTAAACTTGCAGCTGGTGGCGCGTAACTTCTTTGATCCGCAGGCCAAGGTACGGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTTTAAACTTGCAGTTGGTGGCTCGTAATTTCTTTGATCCCCAAGCAAAGGTACGAAG----AAACAATCAAATTT--------------AAGTTTAAATTATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTCTTAAACTGGAATTGGTTGGGCGAAATCTCTTTGATCCCCATGCAAAGGTAAGCGAA-A-----TAAGAAACTTGTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCTTGAACTTGCAACTGGTATCGCGCAATTATTTCGATCCACAAGCAAAGGTTTGCCAC-T--------AAAAATAACACTTATA------------AATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCTTAGACTTGCAGCTGGTGTCGCGCAATTTTTTCGATCCTAAAGCAAAGGTTTGCTAA-C--------TAAATTTGCATTCATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGTTAAACTTGCAGCTGGTTTCGCGCAATTTTTTCGATCCTAAAGCAAAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCTTGAACTTGCAGCTGGTTTCCCGCAACTTCT-TGATCCCAAAGCAAAGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCTTGAACTTGCAGTTGGTGTCTCGCAACTTTTTCGATCCTCAAGCAAAGGTTTGCTAG-T--------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GCTTAGAGCTGCAGTTGGTTCACCGCAATTTGTTCGATCCCAAAGCAAAGGTTTGAAAT-C--------------TACATTCTTAAGCAACAACCTATATTATATATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCTTAGACTTGAAGCTGGTCTCGCGCTACTACTACGATCCTCAAGCTAAGGTTTGCCCT-C--------------TGTACTCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............GCTGGTCTCGCGCTACTACTACGAT...........................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCGCTACTACTACGATCCTCAAGCT..................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACTACGATCCTCAAGCTAAGA..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..TTAGACTTGAAGCTGGTCTCGCGCT......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGACTTGAAGCTGGTCTCGCGCT......................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACTACTACGATCCTCAAGCTAAGA..............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........TTGAAGCTGGTCTCGCGCTACT...................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................ACTACTACGATCCTCAAGCTAAG...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTAGACTTGAAGCTGGTCTCGCGCTAC....................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGCTACTACTACGATCCTCAAGCTAAG...............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTACTACTACGATCCTCAAGC...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............GCTGGTCTCGCGCTACTACTACGATC..........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCTTAGACTTGAAGCTGGTCTCGCGCAACTACTTCGATCCTAAAGCTCAGGTTTGCCCT-C--------------TGCACTCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......ACTTGAAGCTGGTCTCGCGCA......................................................................................................................................................................................................................................................................2112.00200000000000002000
.....................CGCGCAACTACTTCGATCCTAAAGC...................................................................................................................................................................................................................................................2511.00100000010000000000
droSec2
GCTTAGACTTGAAGCTGGTCTCGCGCAACTACTTCGATCCTAGAGCTCAGGTTTGCCCT-C--------------TGCACTCACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ATTTTTAAATT------ATCTTT--------------------------------------------------------------------------------------------------------------------------------------------TATGAATGTTCAAATTGTTACATCAGCTGTTTT-A-------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GCTTAAACTTGCAGTTGGTCTCGCGCAATTTCTTTGATCCTCAAGCTAAGGTTCGCCCT-C--------------TGAACTCGCATTTAAAAGACTATCTGATCAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................CGCGCAATTTCTTTGATCCTCAAGC...................................................................................................................................................................................................................................................2511.0011000000
....................TCGCGCAATTTCTTTGATCCTCAAGC...................................................................................................................................................................................................................................................2611.0011000000

Generated: 05/18/2015 at 12:42 AM